Carg24538 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24538
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Envelope glycoprotein
Location	Cucurbita_argyrosperma_scaffold_121 : 451039 .. 454535 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTATGGGAGATTGCACTGGCAACAGCCTATTTCTTGGGGCTCAAGCGAACATTTAAGCTCGTTTTGAAGACTCAGCGGCGCCTTGTTTCCCCCAACCACCCTCGGATTCGTCGATTTCTTCACCGGTATTTGCCCCTTCTTTCTTATGTTCTTCGTATTTTCTTGATCTTAATGCTTTTGAATGCTTCTGCGCATTGTCTCGTTCAACGCCTTTATTTTCGACTTGATTCTGTAGGATTTGAATTGAAGTCGCTATTTGATTAGTATGTGATGGATGTTTCAATGTCTTGTTTCGATGATGAAAGTTGTTCGATATCTTTTTGTTGAAAAAATCTGGAAGTTGAGGATGTTAGTGATATTGCATAAGACTTCCGTAACTATTGATCTGGATTTTGGAATGTTCATTCACAAATCAAGGATATGTGTCCTTGTGAAACATGATTTTGGGCTTAATATGCTGAACTTTCCATCGTTAATACTCTATCTTCTTGCTTTGCACCTGGGATTTGTTACAGAATCTAGCCCTTCGCATTAAACAAAATGTGAGATCCCATTTCGGTTGGGGAGGAGAATGAAACATTCTTTATAAAGGTGTGGAAATCTCTTCCTAACAGACGCGTCGTCAAAACCTGGAGGGGAATTCCAAAAGAGAAGGCCCAAAGAGGACAATATGTGCTAGCGGTGGGCTTAGGCTGTTACAAATGGTATTAGAGCCAGACACCGGGCGATGTGCCAATGAGGAGACTGAGCCTTGAAGGGGGGTGGACACGAGGCAGTGTGCCAGTAAGGACGCTCGGCCTCGAAGGGGGTAGATTGGAAGGTCCCACATCAATTGGAGAATGAAATGAGTACCAGCAAGGACGCTGGGCCCCGAAAGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACAAAACATTCTTTATAAGGGTGTAGAAACCTCTCTCTAGCAAACACGTTTTAAAAACCTTGAGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGTTGAGCCAGACACCGGGTGATGTGCCAGCGAGGAGGCTGAGCCCCGAAGGGGGTTGGACACAAGGCAGTGTGCCAGTAAGGACGTTGTGCTCTGAAGAGGGTGGATTGGGGGTTCCACATCAATTAAGGAATGGAACAAGTGCCAGCGAGGACGCTAGGCCCCAAAGAGGAGTGGATTGTGAGATCCCCATCGGTTGGGGAGGAGAACGAACGAAGCATTTTTTATAAGGGTGTGGAAACCTCTCTTTAGCAGACGCGTTTTAAAAACCTTGAGGGAAAGCCCAAAGAGGACAATGTCTACTAGCGGTGGGTTTAGGCTATTACACAAATCTCGTGGCAATGGTTGGTGAACTAATTATTCTTAATATGTTTTGTTTATGGTTACTGGATTGAAGCCTTTACATTTGCATTGTAGCATTCTGGTGGAATAGTTGGAGTTATTTATTGTATTGTATGGAAGATATACATGGTCTTAGATGTGGAATTTTTCACATGGGTCTTCATTTTCTCTGTAGAGTCGTAGAGTATAGGCAATTGGGTGATTAAGTTAGTGAAGTTTCAACCTGATGACTGTTGACTGTTCGTACCTGATGTTTAACAATCCACCTCCTTTGGGGGCCATGTCCTCGCTAGCACACCGCCCGGTGTCTGGCTCTGATACCATTTGTAACAGCTCAAGCCCACCACTAGCGGATATTATCCTCTTTGGACTTTCTCTTTTCAATTTTTCTCCAAGGTTTTAAAACGCGTATGTTAGGGAGAAATTTTCATACCCTTACGAGAAATGCTTTGTTCTCCTCTCAAACCAATGTGGGATCTCATAATCCAATCCCCTTGGGGGCCCAATGTCCTCGTTGGCCCACCACCTAGTGCCTGACTCTGATGCGATTTGTAACCGTTCAAGCCCACCGCTATTAGATATCGTTCTCTTTGGGCTTTCCCTTTTGAATTCCCCTCAAGGTTTTACAATGCATTTGTTAGGGAGAGGTTTCCACACACTTATAAAAAATGCTTCGTTCTCCTCTTCAACCGACGTGGTATCTCACACCTTCTAAATATTTTAATTTGTTGCCTAACGTAAAGGGTTTGCTTCCCAAATTTTGGAGACGTCTTCAAACATGTCGAGTCCCTTCCACCGGGGCATATTTTGGGGTTGTTAGTGGTCCCCTTTTCCTTCACAGTTTTCTAATGCTAAATTTGTTATTTAGAACAATGTCTAGAATATGGAACAAATTGCTGCAATGAAACCGATTCATTCTTTCATATTGAGTAATGCAATGCCAAGCGTTTCACTGCATGAGATCTTACATCAGTTGGGGAGGAAAACGAAACACCTTTATAAGGGTGTGGAAACCTTTCCCTAGCAGACGTGTTTTAAAAACTTTGAGAGGAAGCCCGAAAGGGAAAGCCCAAAGAGGGCAATATCTGCTAGCGGTGGGCTTAGGCTACTACAAATGATATCAAAGCCAAACATCGGGCAATGTGCCAGTGAGGACGCTGAGCCTCGAAGGGGGGTGTGGATTGTGAGATCTCACATCGATTTGAGAGGGGAACGAGTGCCAGCGAGGATGCTTGGTTCCGAAGGGGGTGGATTGTGAGATCCCACATCGATTGGAGAAGGGAACGAGTGCAAACGAGGCTGCTGGGCCTCGAAGGGGATGGATTTTGAGATCCCACATCGATTGAAGAGTGGAACGAGTGCAAACGAGGATGCTGGGTTTGGAAGGGGGGTGGATTCTGAGAACCCACATCGTTTGGAAAGGGGAACGAAACATTTTTTATAAAGGTATGAAAACCTCTCCCTAGTTGATGTGTTTTAAAACCTTGAGGGGAAGCCCAAAGACAAAAGCTGAGAGGACAATATCTGCTAGGAGTGAGTTTGGTGGTTCTCGATAAACTCACCAAAATTCCATAATAACTTCAGGATTAATTCCTATATCTTTGCTGCTAGTCTGAACTGATTTTTTTTCTTTAACTGCTCGTATGCACGTTTTCCTTACTGCAGACGAACACGAGCCATATTCGACGTTACTCTGAAAGCTCACCGGACCATTGAGCATCGTGACATAAAAGTTGGTAGGAACGTTAGCAGCTGGATTTCGCAATGGCTTAATCGAACGAAACCGTCTGCTGGGATTCATCAACATCCCAGTGGCACTAACACAGGTATGAAAATGATAAAACAGGTCTCCAACTCGTACATGAAACATCAAGCCAGCACTCGAGCAGCAATCGGTCAGAAAGTCGATAAATATCTATCATTTACCTCATCAGTACACAGATGGCCTAAGGCCTTCCCTACCATTGCAATGATCATGAGGCAACGAAAGCCTGCTGGGACTATGAATCAACACAGACAATTTAGCATTTGTAGCTCTGAAGGAATGAAAACAAATTATAAAAGAGGACGTTTCGAGCACGGTATTCGAGACGATATTAAGCAATGGATGATCCGAAACTAG

mRNA sequence

ATGGTGTTATGGGAGATTGCACTGGCAACAGCCTATTTCTTGGGGCTCAAGCGAACATTTAAGCTCGTTTTGAAGACTCAGCGGCGCCTTGTTTCCCCCAACCACCCTCGGATTCGTCGATTTCTTCACCGACGAACACGAGCCATATTCGACGTTACTCTGAAAGCTCACCGGACCATTGAGCATCGTGACATAAAAGTTGGTAGGAACGTTAGCAGCTGGATTTCGCAATGGCTTAATCGAACGAAACCGTCTGCTGGGATTCATCAACATCCCAGTGGCACTAACACAGGTATGAAAATGATAAAACAGGTCTCCAACTCGTACATGAAACATCAAGCCAGCACTCGAGCAGCAATCGGTCAGAAAGTCGATAAATATCTATCATTTACCTCATCAGTACACAGATGGCCTAAGGCCTTCCCTACCATTGCAATGATCATGAGGCAACGAAAGCCTGCTGGGACTATGAATCAACACAGACAATTTAGCATTTGTAGCTCTGAAGGAATGAAAACAAATTATAAAAGAGGACGTTTCGAGCACGGTATTCGAGACGATATTAAGCAATGGATGATCCGAAACTAG

Coding sequence (CDS)

ATGGTGTTATGGGAGATTGCACTGGCAACAGCCTATTTCTTGGGGCTCAAGCGAACATTTAAGCTCGTTTTGAAGACTCAGCGGCGCCTTGTTTCCCCCAACCACCCTCGGATTCGTCGATTTCTTCACCGACGAACACGAGCCATATTCGACGTTACTCTGAAAGCTCACCGGACCATTGAGCATCGTGACATAAAAGTTGGTAGGAACGTTAGCAGCTGGATTTCGCAATGGCTTAATCGAACGAAACCGTCTGCTGGGATTCATCAACATCCCAGTGGCACTAACACAGGTATGAAAATGATAAAACAGGTCTCCAACTCGTACATGAAACATCAAGCCAGCACTCGAGCAGCAATCGGTCAGAAAGTCGATAAATATCTATCATTTACCTCATCAGTACACAGATGGCCTAAGGCCTTCCCTACCATTGCAATGATCATGAGGCAACGAAAGCCTGCTGGGACTATGAATCAACACAGACAATTTAGCATTTGTAGCTCTGAAGGAATGAAAACAAATTATAAAAGAGGACGTTTCGAGCACGGTATTCGAGACGATATTAAGCAATGGATGATCCGAAACTAG

Protein sequence

MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMKMIKQVSNSYMKHQASTRAAIGQKVDKYLSFTSSVHRWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYKRGRFEHGIRDDIKQWMIRN

Homology

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BLAST of Carg24538 vs. NCBI nr
Match: XP_022963557.1 (uncharacterized protein LOC111463851 [Cucurbita moschata])

HSP 1 Score: 391.7 bits (1005), Expect = 1.4e-105
Identity = 192/195 (98.46%), Postives = 194/195 (99.49%), Query Frame = 0


Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI
Sbjct: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMKMIKQVSNSYMKHQASTRAAI 120
           EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMKMIKQVSNSYMKH+ASTRAAI
Sbjct: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMKMIKQVSNSYMKHRASTRAAI 120

Query: 121 GQKVDKYLSFTSSVHRWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYKRGRF 180
           GQKVDKYLSFTSSVH WPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNY+RGRF
Sbjct: 121 GQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRF 180

Query: 181 EHGIRDDIKQWMIRN 196
           EHGIRDDIKQWMIRN
Sbjct: 181 EHGIRDDIKQWMIRN 195

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BLAST of Carg24538 vs. NCBI nr
Match: XP_022967340.1 (uncharacterized protein LOC111466890 [Cucurbita maxima])

HSP 1 Score: 382.1 bits (980), Expect = 1.1e-102
Identity = 187/194 (96.39%), Postives = 191/194 (98.45%), Query Frame = 0


Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI
Sbjct: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMKMIKQVSNSYMKHQASTRAAI 120
           +HRDIKVG +VSSWISQWLNR KPSAGIHQHPSGTNTGMKMIKQVSNSYMKH+ASTRAAI
Sbjct: 61  QHRDIKVGMHVSSWISQWLNRMKPSAGIHQHPSGTNTGMKMIKQVSNSYMKHRASTRAAI 120

Query: 121 GQKVDKYLSFTSSVHRWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYKRGRF 180
           GQKVDKYLSFTSSVHRWPKAFPTIAMI RQRKPAGTMNQHRQFSICSSEGMKTNY+RGRF
Sbjct: 121 GQKVDKYLSFTSSVHRWPKAFPTIAMITRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRF 180

Query: 181 EHGIRDDIKQWMIR 195
           EHGIRDDIKQWMIR
Sbjct: 181 EHGIRDDIKQWMIR 194

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BLAST of Carg24538 vs. NCBI nr
Match: XP_023511569.1 (uncharacterized protein LOC111776368 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 381.3 bits (978), Expect = 1.9e-102
Identity = 187/195 (95.90%), Postives = 192/195 (98.46%), Query Frame = 0


Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEIALATAYFLGLK+TFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAH TI
Sbjct: 1   MVLWEIALATAYFLGLKKTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHWTI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMKMIKQVSNSYMKHQASTRAAI 120
           EHRDIKVGRNVSSWISQWLNR KPSAGIHQHPSGT+TGMKMIKQVSNSYMKH+ASTRAAI
Sbjct: 61  EHRDIKVGRNVSSWISQWLNRMKPSAGIHQHPSGTDTGMKMIKQVSNSYMKHRASTRAAI 120

Query: 121 GQKVDKYLSFTSSVHRWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYKRGRF 180
           GQKVDKYLSFTSSVH WPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKT+Y+RGRF
Sbjct: 121 GQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTDYRRGRF 180

Query: 181 EHGIRDDIKQWMIRN 196
           EHGIRDDIKQWMIRN
Sbjct: 181 EHGIRDDIKQWMIRN 195

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BLAST of Carg24538 vs. NCBI nr
Match: XP_008466006.1 (PREDICTED: uncharacterized protein LOC103503568 [Cucumis melo])

HSP 1 Score: 297.4 bits (760), Expect = 3.7e-77
Identity = 148/197 (75.13%), Postives = 171/197 (86.80%), Query Frame = 0


Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEIALAT YFLGLKRTFKLVLKTQRRLVSP +PRIR+FL  RTRA+FDVT+K H+TI
Sbjct: 1   MVLWEIALATTYFLGLKRTFKLVLKTQRRLVSPEYPRIRQFLRGRTRAVFDVTVKVHQTI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGT-NTGMKMIKQVSNSYMKHQASTRAA 120
           + +DIK  RN+ SWIS+WLNR+KPSA   +HP+GT NTGMKMIK+VSNSY+KH+ASTRA 
Sbjct: 61  QRQDIKFDRNLGSWISRWLNRSKPSAETQEHPNGTMNTGMKMIKKVSNSYLKHRASTRAV 120

Query: 121 IGQKVDKYLSFTSSVHRWPKA-FPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYKRG 180
           IGQK D+YLS TSSVHRWPK  FPTIAMIMRQRKPAG + QHRQFSI  S G+KTN +R 
Sbjct: 121 IGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPAGIVIQHRQFSIRGSHGLKTNDRRR 180

Query: 181 RFEHGIRDDIKQWMIRN 196
           RF+HGIR+DI QWM++N
Sbjct: 181 RFDHGIREDIMQWMVQN 197

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BLAST of Carg24538 vs. NCBI nr
Match: XP_004136200.1 (PREDICTED: uncharacterized protein LOC101212537 [Cucumis sativus] >KGN60359.1 hypothetical protein Csa_3G901040 [Cucumis sativus])

HSP 1 Score: 294.3 bits (752), Expect = 3.1e-76
Identity = 144/197 (73.10%), Postives = 169/197 (85.79%), Query Frame = 0


Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEIALAT YFLGLKR FKL LKTQRR+VSP +PRIR+FL  RTRA+FDVT+K H+TI
Sbjct: 1   MVLWEIALATTYFLGLKRAFKLALKTQRRIVSPKYPRIRQFLRGRTRAVFDVTVKVHQTI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGT-NTGMKMIKQVSNSYMKHQASTRAA 120
           + +DIKV RN+ SWIS+WLNR KPSA   +HPSG+ NTGMKM+K+VSNSY+KH+ASTRA 
Sbjct: 61  KRQDIKVNRNLRSWISRWLNRRKPSAETQEHPSGSINTGMKMMKKVSNSYLKHRASTRAV 120

Query: 121 IGQKVDKYLSFTSSVHRWPKA-FPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYKRG 180
           IGQK D+YL+ TSSVHRWPK  FPTIAMIMRQRKP G + QHRQFSIC S G+KTN +R 
Sbjct: 121 IGQKFDQYLASTSSVHRWPKPFFPTIAMIMRQRKPTGIVIQHRQFSICGSHGLKTNDRRR 180

Query: 181 RFEHGIRDDIKQWMIRN 196
           RF+HGIR+DI QWM++N
Sbjct: 181 RFDHGIREDIMQWMVQN 197

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BLAST of Carg24538 vs. TAIR10
Match: AT1G32260.1 (unknown protein)

HSP 1 Score: 159.5 bits (402), Expect = 2.2e-39
Identity = 86/200 (43.00%), Postives = 127/200 (63.50%), Query Frame = 0


Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MV WEI L TAYFLGL+RT++L LK QRRLV+P HP+IR+FLHRRTR IFDV +  H+ I
Sbjct: 1   MVFWEITLGTAYFLGLRRTYRLALKIQRRLVTPKHPKIRQFLHRRTRKIFDVAISVHKNI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPS---GTNTGMKMIKQVS--NSYMKHQAS 120
           + RDI+VGRN+ +WI +WL++ KP+A I   P     +N+ M   K+++  +    H  +
Sbjct: 61  QERDIEVGRNLGNWILRWLDKMKPAAQIRTRPELPHNSNSNMDKAKRLTELSRPKSHTNT 120

Query: 121 TRAAIGQKVDKYLSFTSSVHRWPKAFPTIAMIMRQRKPAGTMNQHRQF---SICSSEGMK 180
           T+    ++ D++L FTS  H   K FP+++M+++  +P GT  Q+R +    + +S    
Sbjct: 121 TQTPQNRESDRHL-FTSLKHFRHKPFPSVSMMIQPPRPNGTTTQYRHYYSGGLAASLIQP 180

Query: 181 TNYKRGRFEHGIRDDIKQWM 193
           +    G F   +R DI QWM
Sbjct: 181 SYVTGGGFNGVVRKDILQWM 199

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BLAST of Carg24538 vs. TAIR10
Match: AT2G35480.1 (unknown protein)

HSP 1 Score: 157.5 bits (397), Expect = 8.2e-39
Identity = 86/196 (43.88%), Postives = 126/196 (64.29%), Query Frame = 0


Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWE+AL TAYFLG++RT++L LKTQRRLVSP HPRIR F+HRRT  IFD+ L+ H+ I
Sbjct: 1   MVLWELALGTAYFLGIRRTYRLALKTQRRLVSPKHPRIRDFMHRRTYQIFDMALRVHKNI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMKMIKQV-SNSYMKHQASTRAA 120
           + RD+ +GRN+ +WI + L+R KPSA +   P  T   +   K+V  ++ +K   +T+  
Sbjct: 61  QQRDMVIGRNLGNWILRGLDRMKPSAQV-LLPKNTEPSIDKAKRVLQSTRLKPHVNTQTP 120

Query: 121 IGQKVDKYLSFTSSVHRWPKAFPTIAMIM-RQRKPAGTMNQHRQFSICSSEGMKTNYKRG 180
             ++VD+ L    S+  +   +P  +M+M +  +  GT  Q+R +S+  S  +K  Y RG
Sbjct: 121 QNREVDRNLFM--SLRNFRSKYPIASMMMIKPPRSTGTTTQYRPYSVGESSLIKPIYARG 180

Query: 181 RFEHGIRDDIKQWMIR 195
            F   IR DI QWM++
Sbjct: 181 GFNSVIRKDILQWMVQ 193

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BLAST of Carg24538 vs. TrEMBL
Match: tr|A0A1S3CRP2|A0A1S3CRP2_CUCME (uncharacterized protein LOC103503568 OS=Cucumis melo OX=3656 GN=LOC103503568 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 2.4e-77
Identity = 148/197 (75.13%), Postives = 171/197 (86.80%), Query Frame = 0


Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEIALAT YFLGLKRTFKLVLKTQRRLVSP +PRIR+FL  RTRA+FDVT+K H+TI
Sbjct: 1   MVLWEIALATTYFLGLKRTFKLVLKTQRRLVSPEYPRIRQFLRGRTRAVFDVTVKVHQTI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGT-NTGMKMIKQVSNSYMKHQASTRAA 120
           + +DIK  RN+ SWIS+WLNR+KPSA   +HP+GT NTGMKMIK+VSNSY+KH+ASTRA 
Sbjct: 61  QRQDIKFDRNLGSWISRWLNRSKPSAETQEHPNGTMNTGMKMIKKVSNSYLKHRASTRAV 120

Query: 121 IGQKVDKYLSFTSSVHRWPKA-FPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYKRG 180
           IGQK D+YLS TSSVHRWPK  FPTIAMIMRQRKPAG + QHRQFSI  S G+KTN +R 
Sbjct: 121 IGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPAGIVIQHRQFSIRGSHGLKTNDRRR 180

Query: 181 RFEHGIRDDIKQWMIRN 196
           RF+HGIR+DI QWM++N
Sbjct: 181 RFDHGIREDIMQWMVQN 197

[Close]

BLAST of Carg24538 vs. TrEMBL
Match: tr|A0A0A0LH53|A0A0A0LH53_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901040 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 2.0e-76
Identity = 144/197 (73.10%), Postives = 169/197 (85.79%), Query Frame = 0


Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEIALAT YFLGLKR FKL LKTQRR+VSP +PRIR+FL  RTRA+FDVT+K H+TI
Sbjct: 1   MVLWEIALATTYFLGLKRAFKLALKTQRRIVSPKYPRIRQFLRGRTRAVFDVTVKVHQTI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGT-NTGMKMIKQVSNSYMKHQASTRAA 120
           + +DIKV RN+ SWIS+WLNR KPSA   +HPSG+ NTGMKM+K+VSNSY+KH+ASTRA 
Sbjct: 61  KRQDIKVNRNLRSWISRWLNRRKPSAETQEHPSGSINTGMKMMKKVSNSYLKHRASTRAV 120

Query: 121 IGQKVDKYLSFTSSVHRWPKA-FPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYKRG 180
           IGQK D+YL+ TSSVHRWPK  FPTIAMIMRQRKP G + QHRQFSIC S G+KTN +R 
Sbjct: 121 IGQKFDQYLASTSSVHRWPKPFFPTIAMIMRQRKPTGIVIQHRQFSICGSHGLKTNDRRR 180

Query: 181 RFEHGIRDDIKQWMIRN 196
           RF+HGIR+DI QWM++N
Sbjct: 181 RFDHGIREDIMQWMVQN 197

[Close]

BLAST of Carg24538 vs. TrEMBL
Match: tr|A0A2I4HK28|A0A2I4HK28_9ROSI (uncharacterized protein LOC109018784 OS=Juglans regia OX=51240 GN=LOC109018784 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.6e-47
Identity = 105/201 (52.24%), Postives = 141/201 (70.15%), Query Frame = 0


Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEI LATAYFLGLKRT++L LK QR+++SP HP+IR+FLHRRTRA+F++ +K H  I
Sbjct: 1   MVLWEITLATAYFLGLKRTYRLALKIQRKVISPKHPKIRQFLHRRTRAVFNIAVKVHHNI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIH-----QHPSGTNTGMKMIKQVSNSYMKHQAS 120
           + RDI+VGRNV +WI +WL+R KPSA I      +   G  +G+ M KQV+NS +K    
Sbjct: 61  QERDIEVGRNVGNWILRWLDRMKPSAQIRGSSPGEPSDGARSGLSMTKQVNNSNLKPPVG 120

Query: 121 TRAAIGQKVDKYLSFTSSVHRWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNY 180
            + +  Q   + L FTSS +  PK FPTI+M++R  KPAGTM Q+R FS    E ++++Y
Sbjct: 121 NQTSRKQDSGRQL-FTSSRNILPKPFPTISMMVRPPKPAGTMTQYRHFS--GMEVLRSDY 180

Query: 181 KRGRFE-HGIRDDIKQWMIRN 196
            RG  E  G+R DI QWM++N
Sbjct: 181 SRGWSEGGGLRKDIMQWMLQN 198

[Close]

BLAST of Carg24538 vs. TrEMBL
Match: tr|A0A1Q3CII0|A0A1Q3CII0_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_23324 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 9.9e-47
Identity = 103/201 (51.24%), Postives = 140/201 (69.65%), Query Frame = 0


Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEI L TAYFLGLKRT++L LK QRR++SP HP+IR+ LHRRTR IFDV L+ HR I
Sbjct: 1   MVLWEITLGTAYFLGLKRTYRLALKLQRRIISPKHPKIRQSLHRRTRTIFDVALRFHRNI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHP-----SGTNTGMKMIKQVS-NSYMKHQA 120
           + RD++VGRN+ +WI +WL+R KPSA I  +       G +  M M KQV+ +S +K  +
Sbjct: 61  QERDLEVGRNLGNWILRWLDRMKPSAQIRANSPGKPFDGASPNMNMKKQVTRSSQLKTPS 120

Query: 121 STRAAIGQKVDKYLSFTSSVHRWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTN 180
           + + +   ++D++L FTSS  RWPK+FPT+ M+MR  +PAG   Q+R   I   + +++N
Sbjct: 121 NIQTSKNGEIDRHL-FTSS--RWPKSFPTVPMMMRPPRPAGMNTQYRHLCIQRPDMLRSN 180

Query: 181 YKRGRFEHGIRDDIKQWMIRN 196
           Y  GRFE  IR DI QWM +N
Sbjct: 181 YMSGRFEGVIRKDIMQWMQQN 198

[Close]

BLAST of Carg24538 vs. TrEMBL
Match: tr|A0A2I4DR35|A0A2I4DR35_9ROSI (uncharacterized protein LOC108982617 OS=Juglans regia OX=51240 GN=LOC108982617 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.4e-45
Identity = 102/201 (50.75%), Postives = 139/201 (69.15%), Query Frame = 0


Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEI LATAYFLGLKRT++L LK Q +++SP  P+IR+FL+RRTRA+F++ +K H  I
Sbjct: 1   MVLWEITLATAYFLGLKRTYRLALKIQHKVISPKRPKIRQFLYRRTRAVFNIAVKVHHNI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIH-----QHPSGTNTGMKMIKQVSNSYMKHQAS 120
           + RDI+VGRNV +WI +WL+R KPSA I      +   G  +G+ M KQV+NS +K    
Sbjct: 61  QERDIEVGRNVGNWILRWLDRMKPSAQIRGSSPGEPSDGARSGLSMTKQVNNSNLKPPVG 120

Query: 121 TRAAIGQKVDKYLSFTSSVHRWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNY 180
            + +  Q   + L FTSS +  PK FPTI+M++R  KPAGTM Q+R FS    E ++++Y
Sbjct: 121 NQTSRKQDSARQL-FTSSRNILPKPFPTISMMVRPPKPAGTMTQYRHFS--GMEALRSDY 180

Query: 181 KRGRFE-HGIRDDIKQWMIRN 196
            RG  E  G+R DI QWM++N
Sbjct: 181 SRGWSEGGGLRKDIMQWMLQN 198

The following BLAST results are available for this feature:

BLAST of Carg24538 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963557.1	1.4e-105	98.46	uncharacterized protein LOC111463851 [Cucurbita moschata]	[more]
XP_022967340.1	1.1e-102	96.39	uncharacterized protein LOC111466890 [Cucurbita maxima]	[more]
XP_023511569.1	1.9e-102	95.90	uncharacterized protein LOC111776368 [Cucurbita pepo subsp. pepo]	[more]
XP_008466006.1	3.7e-77	75.13	PREDICTED: uncharacterized protein LOC103503568 [Cucumis melo]	[more]
XP_004136200.1	3.1e-76	73.10	PREDICTED: uncharacterized protein LOC101212537 [Cucumis sativus] >KGN60359.1 hy...	[more]

BLAST of Carg24538 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G32260.1	2.2e-39	43.00	unknown protein	[more]
AT2G35480.1	8.2e-39	43.88	unknown protein	[more]

BLAST of Carg24538 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg24538 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CRP2\|A0A1S3CRP2_CUCME	2.4e-77	75.13	uncharacterized protein LOC103503568 OS=Cucumis melo OX=3656 GN=LOC103503568 PE=...	[more]
tr\|A0A0A0LH53\|A0A0A0LH53_CUCSA	2.0e-76	73.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901040 PE=4 SV=1	[more]
tr\|A0A2I4HK28\|A0A2I4HK28_9ROSI	2.6e-47	52.24	uncharacterized protein LOC109018784 OS=Juglans regia OX=51240 GN=LOC109018784 P...	[more]
tr\|A0A1Q3CII0\|A0A1Q3CII0_CEPFO	9.9e-47	51.24	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_23324 PE=4...	[more]
tr\|A0A2I4DR35\|A0A2I4DR35_9ROSI	2.4e-45	50.75	uncharacterized protein LOC108982617 OS=Juglans regia OX=51240 GN=LOC108982617 P...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24538-RA	Carg24538-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35998	FAMILY NOT NAMED	coord: 1..195

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24538	Cla016236	Watermelon (97103) v1	carwmB0974
Carg24538	Cla008828	Watermelon (97103) v1	carwmB0976
Carg24538	Csa3G008880	Cucumber (Chinese Long) v2	carcuB0984
Carg24538	Csa3G901040	Cucumber (Chinese Long) v2	carcuB0983
Carg24538	MELO3C013832	Melon (DHL92) v3.5.1	carmeB0950
Carg24538	MELO3C003432	Melon (DHL92) v3.5.1	carmeB0949
Carg24538	ClCG10G001380	Watermelon (Charleston Gray)	carwcgB0949
Carg24538	ClCG09G011710	Watermelon (Charleston Gray)	carwcgB0948
Carg24538	CSPI03G46470	Wild cucumber (PI 183967)	carcpiB1006
Carg24538	CSPI03G01410	Wild cucumber (PI 183967)	carcpiB1007
Carg24538	Cucsa.312890	Cucumber (Gy14) v1	carcgyB1087
Carg24538	CmaCh16G011780	Cucurbita maxima (Rimu)	carcmaB1338
Carg24538	CmaCh02G016280	Cucurbita maxima (Rimu)	carcmaB1340
Carg24538	CmaCh19G002190	Cucurbita maxima (Rimu)	carcmaB1339
Carg24538	CmoCh19G002340	Cucurbita moschata (Rifu)	carcmoB1301
Carg24538	CmoCh02G016720	Cucurbita moschata (Rifu)	carcmoB1302
Carg24538	CmoCh16G012280	Cucurbita moschata (Rifu)	carcmoB1300
Carg24538	LsiUNG000180	Bottle gourd (USVL1VR-Ls)	carlsiB887
Carg24538	Cp4.1LG05g00190	Cucurbita pepo (Zucchini)	carcpeB1346
Carg24538	Cp4.1LG15g01950	Cucurbita pepo (Zucchini)	carcpeB1344
Carg24538	Cp4.1LG14g09740	Cucurbita pepo (Zucchini)	carcpeB1343
Carg24538	CsGy3G043920	Cucumber (Gy14) v2	carcgybB0956
Carg24538	CsGy3G001320	Cucumber (Gy14) v2	carcgybB0957
Carg24538	MELO3C013831.2	Melon (DHL92) v3.6.1	carmedB0956
Carg24538	MELO3C003432.2	Melon (DHL92) v3.6.1	carmedB0955
Carg24538	CsaV3_3G001460	Cucumber (Chinese Long) v3	carcucB1012
Carg24538	CsaV3_3G048910	Cucumber (Chinese Long) v3	carcucB1011
Carg24538	Cla97C10G185990	Watermelon (97103) v2	carwmbB1023
Carg24538	Cla97C09G174410	Watermelon (97103) v2	carwmbB1025
Carg24538	Bhi05G000302	Wax gourd	carwgoB1139

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24538	Carg08854	Silver-seed gourd	carcarB612

The following block(s) are covering this gene:

None