CmoCh19G000540 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G000540
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	TRYPTOPHAN SYNTHASE ALPHA CHAIN family protein
Location	Cmo_Chr19 : 304735 .. 308708 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACATTGCTTTCAATTCTTCGTCGTTACTTCGATTGAACAAGATTCCCACTGCCCTTGTCTTTCCCACTCATCCTCGTAAGATTTCAGTCGTCCAATCCAAGCGGTTTGTTCCAATGGCGGCCCTTACAGTTTCCAATGCTATAGGACTGTCGGAAACATTCAGCAAATTGAAGGAACAGGGCAAGGTAAATTTGTTCAACCGTTTATTATCTCCAACTTTAATTTTTTGACACTTCGTTTCTGGGTTGTTTGTTTATATTTGCTCTTGTTTTGTTGAATTATACTTCTTCTGCATTTTGGTGTTCACTGTTTGATACTCTTGAGAGTCCTCATTTCAATTCAATCTAATCAATCCAAGTCTTTACTGGGTTAAATTCTTTCACCAATGCTTAATTGGGATTGATCATGAGATGGGTTAGAGTTCTTCATTCATCAATGTTGTTCTAAATTCATACATGTTTTAAAGGTCGCATTTATCCCCTACATAACTGCTGGTGATCCTGATCTTTCCACCACGGCTGAGGCATTGAAGGTTCTTTCCAACCATGGATCAGATATAATTGAACTTGGTGTTCCATATTCAGATCCCTTGGCAGATGGCCCTGTTATACAGGTTGAATATCTCTCTATCTCTCTTCATTTTTTTCATTCTTAATGTATTGTTCCTTATTCAATTGTCTTTGAATGCGTTCTGTAGGCTGCAGCGACTCGGTCCTTGGCTAGGGGGACAAACTTTAGTGCAATCATTTCTATGCTGAAGGAGGTACTCTCGTTGTACCATGAAACGTGCTGTAGATAATATTAATAGTTTTTCCTCTTCCAATTTTGATCTCAAATTATTTTAGGTAATAGAAAGAATAACTGTCACTTATATAACGACTTAACGCACACCAAATGTGTTATTTTGCGAACTAGGTATAATGAGGTATAGTAACCTAGTCATTAACATTTAAGGTTGTCGTTTGAGAATTTGTTTAATTAGATAATACTGGAACGGAGTCACACTCGAAGCTGCATTTCACCAGGCTGTAAAATTTGTCTTTCCTTTAACGAAGAAATATGTACGTGTATACTTAAATTAGCTCTTGCACTTCTTTTTCGTTAGGAAACTTGAGTTCTCGTGCACGGCATCATCAAATTAAATGTCTTTTGGAATAAGCTTCTGTCTCTATATGCTTCACTGCCATTTAGTTTCTCATTAATGGAATTGAAAGTTGACATATTTTTGTTTTGTTTCCGGCTGCTTAGGTTATTCCTGAACTGTCTTGCCCAATTGCCCTTTTTTCATACTATAACCCAATTCTTAAGCGTGGCGTCGAGAACTTCATGATGACAATAAGAGATGCTGGTGTACATGGTAATTAATGAATTAACCCAATCTTTTATAATGAATTATGTTCAAACTTTTTATCAATTTTTTTTGCCCTACTTTCAAGATAACATGACAATTAGGTCAATTGTCTGGTACTAAATGTTATGGGTTGGCATTTGCTCTAACTTGCTAGAAATGTTGGTTTATTTAGTAGAACATCATTAAATTGTCATTTTCTTTAACCCAGAGAACGGTACAAAACTGAAGTATGTATTAAATTGTCATTATATCATTGCTTAATGAACATGATATTCCAAAATCCTTGTTTCAAATTTATATGTGCACTTGGTGTGAGGTTCTAATGAGCTTGTTTCTGAAATCATGAACTTTGCGAACAACTTCTTTTCTCTTAATGAGAAAAGAGAGGACAGAGGCATATAGGAAGATTATCTGTCTGCTTCACTATTATGTGATTATCTAACTTAATATCATCAACTTCGTGATGAGTCAATGACTATTTGAAAATGAATAATGTTACAACTCTAAATGTAATTTTTCTTGCTTTACAAACTTCCATGGAAAGAAACCTTTCTGAATCTTCGGTTCGTGAATATGTTTGTAATTACATTGCACTTTCTTGCAGGGCTTGTTGTTCCGGACGTTCCTCTGGAAGAGACTGAAATTTTGAGAAAAGAAGCTGTAAAGTACAACATCGAGCTGGTGAATTCCTTTTCTCATAATGGTTGTATTATCTAAATTGATTATTTGTTTTAGGTTTTTGATATTTATTTATGATTTTTACTTAAAGATATTGCACATAGTGGCAAAAACAACCTCTGAAATGGACCTAGCAAATGGAACAGTCCAAAGATCTTGATAACTTCCCCGTTGATTCCACACGTAAATTAGGGACATAATCTGCAGTGCTGAAGATTAGTATATTATTACTTGGTTGAACCTGCAGAGTATCCAGTTTTCTTGATCACGATTGTTAAGGCGGAAAACAGTTGCCTCGAGTACTGAAAATTATTTGATTGTTGAACTGTACTTCCCTGCATTCTTTTCATATCTGTAGAATGAAATTATTAAGGTAAAAAGTAGCCAATTCGACTCGTTTGTCTAAAGATAGGATGATTAGTTGTTATACATCATCCATTTGTTTGGTAATGCTTTGTTCACGAAATCAGAAAAACGGGCGAAATCTGAAGAACAGGTGGAGTTGTTATACATCATCATTAGTTGTTATACATCATCATTAGTTGTTATACATCATCCATTTGTGTGGTAATGCTTTGTTCACAAATTCAGAAGAACAGGCAGAGTGTATTGTTTCTAGATATTTGCTGGTTCTTATGAATTTTGTACTCTGCTAAAGGTACTCTTAACTACACCGACCACGCCTAAAGATAGGATGAAAGCGATCGTTGAAGCTTCAGAGGGATTTGTGTATCTTGTAAGACCTTTTTCTGTTTTTGTCTCTTTATATGCAAATAAGTTGTAGCTTTTTCTTGTTGTTCATGGTGTCATTGAACTTGAAATTGTCTTGCTTGTAACATTACCATGACGGCACATCTAGAGTGTTCCAAAATTATTTTTCAGAATGGTATTTTAACAATGTGATTATTTTCAGAACCCTCTTTTTGATGGAGTTAAGTTATAGAACAACAACAGAATTGTGTAGGAAGAAGAGAGATCGTTTTCGGTTTTGTTGGAGCATATTGCTTTAATCGCTTTGTTTTCGTGCACAAACGGAATGATAGATTGCATTGAAAGAACAAGGAGTTTTGGTGAAGATAGTAAATTACAGTTATTCTCTATGTTACTTCCTCTGTATTATACCATTGAGATCGAGTCGAAATTACGATGTCCTTCTCTGTCAGACTTGCAATATGAAATTTGTTTTCGTTCGATTATAGGTGAGCTCCGTAGGAGTTACCGGTGCCCGTACATCAGTGAGTGATCGAGTTCAAACTCTCCTTGAGGAAATCAAAGAGGTGCATCTTCTTCAGTCTTAATAACTATCTAGGATGTACTTGTAATAGCTACAAATTTGAAAGCTGATGACTTTGAAACCAATCAATAAAATAAGCCTTACACTCTCTACTTTGTTTGGCAGGCAACAGAAAAACCAGTGGCAGTAGGTTTCGGTATATCAAAACCCGAGCACGTGAAACAGGTAAAAGAATTTCGTCATACACTGAAACAGTTTACTTCTCCTGCATTTTTTCTGGATAATATGTTGTTGTGTTCGTCCATAGGTGGCCAACTGGGGGGCTGATGGGATCATAGTTGGTAGTGCTATGGTGAAGCTGTTGGGAGAAGCTCAGACTCCTGAAGAAGGATTGAAGGCACTAGAAAGCTTCACCAAATCCTTAAAATCTGCTCTCTCCTAATCAAATTTTGATGGAATAAGAGGTCAGCTAGCTCTATCACTGAAGCCTGCTAGTGTTTTACAGTCATCTTTAAATGATACTTAAAACATTTCTCTTTCTTTTTAGCTGAATAAGACTGTCAGTTTAGTTCTGTTTAAGGATATTGCTTGGTGTTTTAGCTAATATAAGTTTTGTTCTTTCTGGTTCAAAAGGTTCCACTCTCATGCCTGCATTTTTGTTAAGGTTTTGAGTATAGGAAGCTCTTTAGTTGAAGGACGTTTCAAAC

mRNA sequence

ATGGACATTGCTTTCAATTCTTCGTCGTTACTTCGATTGAACAAGATTCCCACTGCCCTTGTCTTTCCCACTCATCCTCGTAAGATTTCAGTCGTCCAATCCAAGCGGTTTGTTCCAATGGCGGCCCTTACAGTTTCCAATGCTATAGGACTGTCGGAAACATTCAGCAAATTGAAGGAACAGGGCAAGGTCGCATTTATCCCCTACATAACTGCTGGTGATCCTGATCTTTCCACCACGGCTGAGGCATTGAAGGTTCTTTCCAACCATGGATCAGATATAATTGAACTTGGTGTTCCATATTCAGATCCCTTGGCAGATGGCCCTGTTATACAGGCTGCAGCGACTCGGTCCTTGGCTAGGGGGACAAACTTTAGTGCAATCATTTCTATGCTGAAGGAGGTTATTCCTGAACTGTCTTGCCCAATTGCCCTTTTTTCATACTATAACCCAATTCTTAAGCGTGGCGTCGAGAACTTCATGATGACAATAAGAGATGCTGGTGTACATGGGCTTGTTGTTCCGGACGTTCCTCTGGAAGAGACTGAAATTTTGAGAAAAGAAGCTGTAAAGTACAACATCGAGCTGGTACTCTTAACTACACCGACCACGCCTAAAGATAGGATGAAAGCGATCGTTGAAGCTTCAGAGGGATTTGTGTATCTTGTGAGCTCCGTAGGAGTTACCGGTGCCCGTACATCAGTGAGTGATCGAGTTCAAACTCTCCTTGAGGAAATCAAAGAGGCAACAGAAAAACCAGTGGCAGTAGGTTTCGGTATATCAAAACCCGAGCACGTGAAACAGGTGGCCAACTGGGGGGCTGATGGGATCATAGTTGGTAGTGCTATGGTGAAGCTGTTGGGAGAAGCTCAGACTCCTGAAGAAGGATTGAAGGCACTAGAAAGCTTCACCAAATCCTTAAAATCTGCTCTCTCCTAATCAAATTTTGATGGAATAAGAGGTCAGCTAGCTCTATCACTGAAGCCTGCTAGTGTTTTACAGTCATCTTTAAATGATACTTAAAACATTTCTCTTTCTTTTTAGCTGAATAAGACTGTCAGTTTAGTTCTGTTTAAGGATATTGCTTGGTGTTTTAGCTAATATAAGTTTTGTTCTTTCTGGTTCAAAAGGTTCCACTCTCATGCCTGCATTTTTGTTAAGGTTTTGAGTATAGGAAGCTCTTTAGTTGAAGGACGTTTCAAAC

Coding sequence (CDS)

ATGGACATTGCTTTCAATTCTTCGTCGTTACTTCGATTGAACAAGATTCCCACTGCCCTTGTCTTTCCCACTCATCCTCGTAAGATTTCAGTCGTCCAATCCAAGCGGTTTGTTCCAATGGCGGCCCTTACAGTTTCCAATGCTATAGGACTGTCGGAAACATTCAGCAAATTGAAGGAACAGGGCAAGGTCGCATTTATCCCCTACATAACTGCTGGTGATCCTGATCTTTCCACCACGGCTGAGGCATTGAAGGTTCTTTCCAACCATGGATCAGATATAATTGAACTTGGTGTTCCATATTCAGATCCCTTGGCAGATGGCCCTGTTATACAGGCTGCAGCGACTCGGTCCTTGGCTAGGGGGACAAACTTTAGTGCAATCATTTCTATGCTGAAGGAGGTTATTCCTGAACTGTCTTGCCCAATTGCCCTTTTTTCATACTATAACCCAATTCTTAAGCGTGGCGTCGAGAACTTCATGATGACAATAAGAGATGCTGGTGTACATGGGCTTGTTGTTCCGGACGTTCCTCTGGAAGAGACTGAAATTTTGAGAAAAGAAGCTGTAAAGTACAACATCGAGCTGGTACTCTTAACTACACCGACCACGCCTAAAGATAGGATGAAAGCGATCGTTGAAGCTTCAGAGGGATTTGTGTATCTTGTGAGCTCCGTAGGAGTTACCGGTGCCCGTACATCAGTGAGTGATCGAGTTCAAACTCTCCTTGAGGAAATCAAAGAGGCAACAGAAAAACCAGTGGCAGTAGGTTTCGGTATATCAAAACCCGAGCACGTGAAACAGGTGGCCAACTGGGGGGCTGATGGGATCATAGTTGGTAGTGCTATGGTGAAGCTGTTGGGAGAAGCTCAGACTCCTGAAGAAGGATTGAAGGCACTAGAAAGCTTCACCAAATCCTTAAAATCTGCTCTCTCCTAA

Homology

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BLAST of CmoCh19G000540 vs. Swiss-Prot
Match: TRPA1_ARATH (Tryptophan synthase alpha chain OS=Arabidopsis thaliana GN=TRPA1 PE=1 SV=2)

HSP 1 Score: 430.3 bits (1105), Expect = 1.9e-119
Identity = 215/268 (80.22%), Postives = 246/268 (91.79%), Query Frame = 1


Query: 44  TVSNAIGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSD 103
           T S+ +GLSETF++LK QGKVA IPYITAGDPDLSTTA+ALKVL + GSDIIELGVPYSD
Sbjct: 6   TPSSTVGLSETFARLKSQGKVALIPYITAGDPDLSTTAKALKVLDSCGSDIIELGVPYSD 65

Query: 104 PLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMT 163
           PLADGP IQAAA RSL +GTNF++IISMLKEVIP+LSCPIALF+YYNPIL+RGVEN+M  
Sbjct: 66  PLADGPAIQAAARRSLLKGTNFNSIISMLKEVIPQLSCPIALFTYYNPILRRGVENYMTV 125

Query: 164 IRDAGVHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLV 223
           I++AGVHGL+VPDVPLEETE LR EA K+ IELVLLTTPTTPK+RM AIVEASEGF+YLV
Sbjct: 126 IKNAGVHGLLVPDVPLEETETLRNEARKHQIELVLLTTPTTPKERMNAIVEASEGFIYLV 185

Query: 224 SSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAM 283
           SSVGVTG R SV+++VQ+LL++IKEAT KPVAVGFGISKPEHVKQVA WGADG+IVGSAM
Sbjct: 186 SSVGVTGTRESVNEKVQSLLQQIKEATSKPVAVGFGISKPEHVKQVAEWGADGVIVGSAM 245

Query: 284 VKLLGEAQTPEEGLKALESFTKSLKSAL 312
           VK+LGE+++PE+GLK LE FTKSLKSAL
Sbjct: 246 VKILGESESPEQGLKELEFFTKSLKSAL 273

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BLAST of CmoCh19G000540 vs. Swiss-Prot
Match: TRPA2_ARATH (Tryptophan synthase alpha chain, chloroplastic OS=Arabidopsis thaliana GN=TSA1 PE=1 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 1.7e-117
Identity = 214/283 (75.62%), Postives = 252/283 (89.05%), Query Frame = 1


Query: 30  SVVQSKRFVPMAALTVSN-AIGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLS 89
           S +  KRF PMA+L+ S+  +GL++TF++LK+QGKVAFIPYITAGDPDLSTTAEALKVL 
Sbjct: 29  SSLSFKRFTPMASLSTSSPTLGLADTFTQLKKQGKVAFIPYITAGDPDLSTTAEALKVLD 88

Query: 90  NHGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSY 149
             GSDIIELGVPYSDPLADGPVIQAAATRSL RGTN  +I+ ML +V+P++SCPI+LF+Y
Sbjct: 89  ACGSDIIELGVPYSDPLADGPVIQAAATRSLERGTNLDSILEMLDKVVPQISCPISLFTY 148

Query: 150 YNPILKRGVENFMMTIRDAGVHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDR 209
           YNPILKRG+  FM +IR  GV GLVVPDVPLEETE+LRKEA+  +IELVLLTTPTTP +R
Sbjct: 149 YNPILKRGLGKFMSSIRAVGVQGLVVPDVPLEETEMLRKEALNNDIELVLLTTPTTPTER 208

Query: 210 MKAIVEASEGFVYLVSSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQ 269
           MK IV+ASEGF+YLVSS+GVTGAR+SVS +VQ+LL++IKEAT+KPVAVGFGISKPEHVKQ
Sbjct: 209 MKLIVDASEGFIYLVSSIGVTGARSSVSGKVQSLLKDIKEATDKPVAVGFGISKPEHVKQ 268

Query: 270 VANWGADGIIVGSAMVKLLGEAQTPEEGLKALESFTKSLKSAL 312
           +A WGADG+IVGSAMVKLLG+A++P EGLK LE  TKSLKSAL
Sbjct: 269 IAGWGADGVIVGSAMVKLLGDAKSPTEGLKELEKLTKSLKSAL 311

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BLAST of CmoCh19G000540 vs. Swiss-Prot
Match: TRPA_MAIZE (Indole-3-glycerol phosphate lyase, chloroplastic OS=Zea mays GN=BX1 PE=1 SV=2)

HSP 1 Score: 322.8 bits (826), Expect = 4.2e-87
Identity = 156/261 (59.77%), Postives = 202/261 (77.39%), Query Frame = 1


Query: 51  LSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPV 110
           +S+T + L  +GK AFIPYITAGDPDL+TTAEAL++L   G+D+IELGVP SDP  DGP+
Sbjct: 90  VSDTMAALMAKGKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPI 149

Query: 111 IQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVH 170
           IQA+  R+LA GT   A++ ML+EV PELSCP+ L SYY PI+ R +      +++AGVH
Sbjct: 150 IQASVARALASGTTMDAVLEMLREVTPELSCPVVLLSYYKPIMSRSLAE----MKEAGVH 209

Query: 171 GLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTG 230
           GL+VPD+P      L  EA   N+ELVLLTTP  P+DRMK I +ASEGFVYLVS  GVTG
Sbjct: 210 GLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTG 269

Query: 231 ARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEA 290
            R +V+ RV++L++E+K+ T KPVAVGFGISKPEHVKQ+A WGADG+I+GSAMV+ LGEA
Sbjct: 270 PRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVRQLGEA 329

Query: 291 QTPEEGLKALESFTKSLKSAL 312
            +P++GL+ LE + + +K+AL
Sbjct: 330 ASPKQGLRRLEEYARGMKNAL 346

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BLAST of CmoCh19G000540 vs. Swiss-Prot
Match: TRPA_CYAP8 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 8801) GN=trpA PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 4.8e-83
Identity = 154/261 (59.00%), Postives = 196/261 (75.10%), Query Frame = 1


Query: 51  LSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPV 110
           +S+ F  L+++ + A IP+ITAGDPDL TTA+AL++L   G+D+IELGVPYSDPLADGPV
Sbjct: 4   VSDCFQSLRDRRQCALIPFITAGDPDLETTAKALRLLDASGADLIELGVPYSDPLADGPV 63

Query: 111 IQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVH 170
           IQAAATR+L RG     ++ ++KEV PE+  PI LF+YYNPI  RGVE F+  ++ AGV 
Sbjct: 64  IQAAATRALGRGVKLEDVLGVVKEVSPEIKAPIILFTYYNPIFYRGVEAFLQQVKAAGVQ 123

Query: 171 GLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTG 230
           GLVVPD+PLEE E L K A +  I + LL  PT+P +R++AI   S+GF+YLVS  GVTG
Sbjct: 124 GLVVPDLPLEEAESLLKPAHEVGIAVTLLVAPTSPIERIEAIARQSQGFIYLVSVTGVTG 183

Query: 231 ARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEA 290
            R+ V+ RV+ LL  ++ AT+KP+ VGFGISKPEH  QV NWGAD +IVGSAMVK L E 
Sbjct: 184 MRSQVTSRVKELLTSLRSATDKPIGVGFGISKPEHALQVKNWGADAVIVGSAMVKRLAEG 243

Query: 291 QTPEEGLKALESFTKSLKSAL 312
            TPEEGLKA+ +F + LK AL
Sbjct: 244 -TPEEGLKAIGAFCQDLKQAL 263

[Close]

BLAST of CmoCh19G000540 vs. Swiss-Prot
Match: TRPA_CYAP4 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=trpA PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 2.6e-81
Identity = 149/264 (56.44%), Postives = 191/264 (72.35%), Query Frame = 1


Query: 49  IGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADG 108
           + +S  FS L+++ + A IP+ITAGDP L  TA+AL+VL   G+D+IELGVPYSDPLADG
Sbjct: 2   VSVSTCFSALRDRAQCALIPFITAGDPSLEITAKALQVLDQQGADLIELGVPYSDPLADG 61

Query: 109 PVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAG 168
           P IQAAATR+L +GT   A++ M+  V P L  P+ LF+YYNPI  RGVE F+  +  AG
Sbjct: 62  PTIQAAATRALQKGTRLDAVLEMISHVAPNLRSPLILFTYYNPIFHRGVEPFLQQVAQAG 121

Query: 169 VHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGV 228
           V GLVVPD+PLEE + +  +A    IEL LL  PTTP+ R+ AI E S+GF+YLVS+ GV
Sbjct: 122 VQGLVVPDLPLEEADTVLTQAAAVGIELTLLVAPTTPRSRIAAIAERSQGFIYLVSTTGV 181

Query: 229 TGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLG 288
           TG R+ V  RV  LL E+++ T+KP+ VGFGIS+PEH +QV  WGAD  IVGSA VK L 
Sbjct: 182 TGMRSKVEGRVHELLLELQQVTDKPIGVGFGISQPEHARQVMEWGADAAIVGSAFVKRLA 241

Query: 289 EAQTPEEGLKALESFTKSLKSALS 313
           E  TPE+GL A+  F +SLK+AL+
Sbjct: 242 EG-TPEQGLAAIADFCRSLKTALT 264

[Close]

BLAST of CmoCh19G000540 vs. TrEMBL
Match: A0A0A0LKV4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G225330 PE=3 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 6.0e-149
Identity = 276/311 (88.75%), Postives = 293/311 (94.21%), Query Frame = 1


Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTVSNAIGLSETFSKLKE 60
           MDI  NSS L + NKIPT L+FP HP KISV QSKR VPMA+LT S+A+GLSETFSKLKE
Sbjct: 1   MDIVLNSSRLFQFNKIPTTLIFPPHPCKISVFQSKRVVPMASLTASSAVGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLS  GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRG+ NFM+TI+DAGV GLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMLTIKDAGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETEILRKEAVK++IELVLLTTPTTP+DRMKAIVEASEGFVYLVSSVGVTGAR SVS++VQ
Sbjct: 181 ETEILRKEAVKHSIELVLLTTPTTPRDRMKAIVEASEGFVYLVSSVGVTGARASVSNKVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEEIKE TEKPVAVGFGISKPEHVKQV++WGADGIIVGSAMVKLLGEAQ+PEEGLKAL
Sbjct: 241 TLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIVGSAMVKLLGEAQSPEEGLKAL 300

Query: 301 ESFTKSLKSAL 312
           E+FTKSL SAL
Sbjct: 301 ENFTKSLTSAL 311

[Close]

BLAST of CmoCh19G000540 vs. TrEMBL
Match: A0A0A0LD81_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G843770 PE=3 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 1.9e-139
Identity = 262/312 (83.97%), Postives = 279/312 (89.42%), Query Frame = 1


Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTVSNAIGLSETFSKLKE 60
           MDIAF SS +L LNKIP  L+F   P KISV QSKRF PMAAL     +GLSETF  L+E
Sbjct: 1   MDIAFKSSRILPLNKIPNTLIFSPRPCKISVSQSKRFAPMAALAAYPVVGLSETFKNLRE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVA IPYITAGDPDLSTTAEALKVLS  GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVALIPYITAGDPDLSTTAEALKVLSKCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           R TNF+AIISMLK VIPELS PI+LF+YYNPILKRGVENFMM I+D GV GLVVPDVPLE
Sbjct: 121 RETNFNAIISMLKGVIPELSRPISLFTYYNPILKRGVENFMMIIKDTGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETE+LRKEAVK+NIELVLLTTPTTPK+RMK IVEASEGFVYLVSS+GVTG RTSVS RVQ
Sbjct: 181 ETEVLRKEAVKHNIELVLLTTPTTPKERMKNIVEASEGFVYLVSSIGVTGTRTSVSSRVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEE+KE TEKPVAVGFGISKPEHVKQVA WGADGII+GSAMVKLLGEAQ+PEEGLK L
Sbjct: 241 TLLEEVKEVTEKPVAVGFGISKPEHVKQVAEWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300

Query: 301 ESFTKSLKSALS 313
           E+FT+SLKSALS
Sbjct: 301 ENFTRSLKSALS 312

[Close]

BLAST of CmoCh19G000540 vs. TrEMBL
Match: A0A067JC03_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21847 PE=3 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 9.0e-129
Identity = 241/305 (79.02%), Postives = 271/305 (88.85%), Query Frame = 1


Query: 7   SSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTVSNAIGLSETFSKLKEQGKVAF 66
           ++S L L K  T L     P K +VV ++R   MAALTV+ ++GL+ETFS LK++GKVAF
Sbjct: 8   TASFLHLRKPETHLFIRFPPYKSAVVSTRRIAEMAALTVTPSLGLAETFSNLKKEGKVAF 67

Query: 67  IPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFS 126
           IPYITAGDPDLSTTAEALKVL + GSDIIELGVPYSDPLADGPVIQAAATRSLA+GTNF 
Sbjct: 68  IPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLAKGTNFD 127

Query: 127 AIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLEETEILR 186
           A+ISMLKEVIP+LS P+ALF+YYNPILKRG+E FM T++D GVHGLVVPDVPLEETE+LR
Sbjct: 128 AVISMLKEVIPQLSSPVALFTYYNPILKRGIEKFMSTVKDVGVHGLVVPDVPLEETELLR 187

Query: 187 KEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQTLLEEI 246
           KEAVK NIELVLLTTPTTPK RMKAIV+ASEGFVYLVSSVGVTGAR SVSDRVQTLL+EI
Sbjct: 188 KEAVKNNIELVLLTTPTTPKGRMKAIVKASEGFVYLVSSVGVTGARASVSDRVQTLLQEI 247

Query: 247 KEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKALESFTKS 306
           KE T KPVAVGFGISKPEHVKQVA WGADG+IVGSA+VK+LG+A++PEEGLK LE+ TKS
Sbjct: 248 KEETTKPVAVGFGISKPEHVKQVAGWGADGVIVGSAIVKVLGDAKSPEEGLKELENLTKS 307

Query: 307 LKSAL 312
           LKSAL
Sbjct: 308 LKSAL 312

[Close]

BLAST of CmoCh19G000540 vs. TrEMBL
Match: A0A061DQA0_THECC (Aldolase-type TIM barrel family protein OS=Theobroma cacao GN=TCM_004218 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 7.6e-128
Identity = 234/281 (83.27%), Postives = 259/281 (92.17%), Query Frame = 1


Query: 32  VQSKRFVPMAALTVSNAIGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHG 91
           V +KRF PMA +T +  +GL++TFSKLK QGKVA IPYITAGDPDLSTT EALKVL + G
Sbjct: 32  VSTKRFTPMATVTTATTLGLADTFSKLKTQGKVALIPYITAGDPDLSTTTEALKVLDSCG 91

Query: 92  SDIIELGVPYSDPLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNP 151
           +DIIELGVPYSDPLADGPVIQAAATRSLARGTNF+AI+SMLKEV+PELSCPIALF+YYNP
Sbjct: 92  ADIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPELSCPIALFTYYNP 151

Query: 152 ILKRGVENFMMTIRDAGVHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKA 211
           ILKRGVE F+ T++D G+HGLVVPDVPLEETEILR+EA+K  IELVLLTTPTTP DRMKA
Sbjct: 152 ILKRGVEKFLSTVKDVGIHGLVVPDVPLEETEILRREALKNKIELVLLTTPTTPIDRMKA 211

Query: 212 IVEASEGFVYLVSSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVAN 271
           IVEASEGFVYLVSS+GVTGAR SVSDRVQTL+ EIKEAT KPVAVGFGISKPEHVKQVA 
Sbjct: 212 IVEASEGFVYLVSSIGVTGARASVSDRVQTLIGEIKEATTKPVAVGFGISKPEHVKQVAG 271

Query: 272 WGADGIIVGSAMVKLLGEAQTPEEGLKALESFTKSLKSALS 313
           WGADG+IVGSAMVKLLGEA++PE+GLKALE FTKSLKSAL+
Sbjct: 272 WGADGVIVGSAMVKLLGEAESPEDGLKALEIFTKSLKSALA 312

[Close]

BLAST of CmoCh19G000540 vs. TrEMBL
Match: B9S4R8_RICCO (Trytophan synthase alpha subunit, putative OS=Ricinus communis GN=RCOM_0991580 PE=3 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 3.8e-127
Identity = 237/306 (77.45%), Postives = 268/306 (87.58%), Query Frame = 1


Query: 6   NSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTVSNAIGLSETFSKLKEQGKVA 65
           +++S L   K  T L+  +   K +V+ ++RF PMA LT +  + LSETFS LK++GKVA
Sbjct: 7   STTSFLHDRKPETHLLIRSPSYKPTVISTRRFAPMATLTAAKNLSLSETFSNLKKRGKVA 66

Query: 66  FIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNF 125
           FIPYITAGDPDLSTTAEALK+L + GSDIIELGVPYSDPLADGPVIQAAATRSLARGTNF
Sbjct: 67  FIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNF 126

Query: 126 SAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLEETEIL 185
            AI SMLKEV+P+LSCPIALF+YYNPILKRG+E FM T++D GVHGLVVPDVPLEETE+L
Sbjct: 127 DAITSMLKEVVPQLSCPIALFTYYNPILKRGIEKFMSTVKDIGVHGLVVPDVPLEETELL 186

Query: 186 RKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQTLLEE 245
           R EA K NIELVLLTTPTTP +RMKAIVEA+EGFVYLVSSVGVTGAR SVSDRVQTLL+E
Sbjct: 187 RNEAAKKNIELVLLTTPTTPTERMKAIVEAAEGFVYLVSSVGVTGARASVSDRVQTLLQE 246

Query: 246 IKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKALESFTK 305
           IKEAT KPVAVGFGISKPEHVKQVA WGADG+IVGSAMVK+LGEA++PEEGL+ L + TK
Sbjct: 247 IKEATAKPVAVGFGISKPEHVKQVAGWGADGVIVGSAMVKVLGEAKSPEEGLEELATLTK 306

Query: 306 SLKSAL 312
           SLKSAL
Sbjct: 307 SLKSAL 312

[Close]

BLAST of CmoCh19G000540 vs. TAIR10
Match: AT4G02610.1 (AT4G02610.1 Aldolase-type TIM barrel family protein)

HSP 1 Score: 430.3 bits (1105), Expect = 1.0e-120
Identity = 215/268 (80.22%), Postives = 246/268 (91.79%), Query Frame = 1


Query: 44  TVSNAIGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSD 103
           T S+ +GLSETF++LK QGKVA IPYITAGDPDLSTTA+ALKVL + GSDIIELGVPYSD
Sbjct: 6   TPSSTVGLSETFARLKSQGKVALIPYITAGDPDLSTTAKALKVLDSCGSDIIELGVPYSD 65

Query: 104 PLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMT 163
           PLADGP IQAAA RSL +GTNF++IISMLKEVIP+LSCPIALF+YYNPIL+RGVEN+M  
Sbjct: 66  PLADGPAIQAAARRSLLKGTNFNSIISMLKEVIPQLSCPIALFTYYNPILRRGVENYMTV 125

Query: 164 IRDAGVHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLV 223
           I++AGVHGL+VPDVPLEETE LR EA K+ IELVLLTTPTTPK+RM AIVEASEGF+YLV
Sbjct: 126 IKNAGVHGLLVPDVPLEETETLRNEARKHQIELVLLTTPTTPKERMNAIVEASEGFIYLV 185

Query: 224 SSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAM 283
           SSVGVTG R SV+++VQ+LL++IKEAT KPVAVGFGISKPEHVKQVA WGADG+IVGSAM
Sbjct: 186 SSVGVTGTRESVNEKVQSLLQQIKEATSKPVAVGFGISKPEHVKQVAEWGADGVIVGSAM 245

Query: 284 VKLLGEAQTPEEGLKALESFTKSLKSAL 312
           VK+LGE+++PE+GLK LE FTKSLKSAL
Sbjct: 246 VKILGESESPEQGLKELEFFTKSLKSAL 273

[Close]

BLAST of CmoCh19G000540 vs. TAIR10
Match: AT3G54640.1 (AT3G54640.1 tryptophan synthase alpha chain)

HSP 1 Score: 423.7 bits (1088), Expect = 9.8e-119
Identity = 214/283 (75.62%), Postives = 252/283 (89.05%), Query Frame = 1


Query: 30  SVVQSKRFVPMAALTVSN-AIGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLS 89
           S +  KRF PMA+L+ S+  +GL++TF++LK+QGKVAFIPYITAGDPDLSTTAEALKVL 
Sbjct: 29  SSLSFKRFTPMASLSTSSPTLGLADTFTQLKKQGKVAFIPYITAGDPDLSTTAEALKVLD 88

Query: 90  NHGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSY 149
             GSDIIELGVPYSDPLADGPVIQAAATRSL RGTN  +I+ ML +V+P++SCPI+LF+Y
Sbjct: 89  ACGSDIIELGVPYSDPLADGPVIQAAATRSLERGTNLDSILEMLDKVVPQISCPISLFTY 148

Query: 150 YNPILKRGVENFMMTIRDAGVHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDR 209
           YNPILKRG+  FM +IR  GV GLVVPDVPLEETE+LRKEA+  +IELVLLTTPTTP +R
Sbjct: 149 YNPILKRGLGKFMSSIRAVGVQGLVVPDVPLEETEMLRKEALNNDIELVLLTTPTTPTER 208

Query: 210 MKAIVEASEGFVYLVSSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQ 269
           MK IV+ASEGF+YLVSS+GVTGAR+SVS +VQ+LL++IKEAT+KPVAVGFGISKPEHVKQ
Sbjct: 209 MKLIVDASEGFIYLVSSIGVTGARSSVSGKVQSLLKDIKEATDKPVAVGFGISKPEHVKQ 268

Query: 270 VANWGADGIIVGSAMVKLLGEAQTPEEGLKALESFTKSLKSAL 312
           +A WGADG+IVGSAMVKLLG+A++P EGLK LE  TKSLKSAL
Sbjct: 269 IAGWGADGVIVGSAMVKLLGDAKSPTEGLKELEKLTKSLKSAL 311

[Close]

BLAST of CmoCh19G000540 vs. NCBI nr
Match: gi|659096912|ref|XP_008449352.1| (PREDICTED: tryptophan synthase alpha chain-like isoform X1 [Cucumis melo])

HSP 1 Score: 538.5 bits (1386), Expect = 7.7e-150
Identity = 278/312 (89.10%), Postives = 294/312 (94.23%), Query Frame = 1


Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTVSNAIGLSETFSKLKE 60
           MD   NSS L + NKIPT L+FP HP KISV QSKR VPMA+LT S+A+GLSETFSKLKE
Sbjct: 1   MDTVLNSSRLFQFNKIPTTLIFPPHPCKISVFQSKRVVPMASLTASSAVGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLS  GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRG+ NFM+TI+DAGV GLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMLTIKDAGVQGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETEILRKEAVK+NIELVLLTTPTTP+DRMKAIVEASEGFVYLVSSVGVTGAR SVS++VQ
Sbjct: 181 ETEILRKEAVKHNIELVLLTTPTTPRDRMKAIVEASEGFVYLVSSVGVTGARASVSNKVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEEIKE TEKPVAVGFGISKPEHVKQV++WGADGIIVGSAMVKLLGEAQ+PEEGLKAL
Sbjct: 241 TLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIVGSAMVKLLGEAQSPEEGLKAL 300

Query: 301 ESFTKSLKSALS 313
           E+FTKSLKSALS
Sbjct: 301 ENFTKSLKSALS 312

[Close]

BLAST of CmoCh19G000540 vs. NCBI nr
Match: gi|449455268|ref|XP_004145375.1| (PREDICTED: tryptophan synthase alpha chain-like isoform X1 [Cucumis sativus])

HSP 1 Score: 535.0 bits (1377), Expect = 8.6e-149
Identity = 276/311 (88.75%), Postives = 293/311 (94.21%), Query Frame = 1


Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTVSNAIGLSETFSKLKE 60
           MDI  NSS L + NKIPT L+FP HP KISV QSKR VPMA+LT S+A+GLSETFSKLKE
Sbjct: 1   MDIVLNSSRLFQFNKIPTTLIFPPHPCKISVFQSKRVVPMASLTASSAVGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLS  GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRG+ NFM+TI+DAGV GLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMLTIKDAGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETEILRKEAVK++IELVLLTTPTTP+DRMKAIVEASEGFVYLVSSVGVTGAR SVS++VQ
Sbjct: 181 ETEILRKEAVKHSIELVLLTTPTTPRDRMKAIVEASEGFVYLVSSVGVTGARASVSNKVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEEIKE TEKPVAVGFGISKPEHVKQV++WGADGIIVGSAMVKLLGEAQ+PEEGLKAL
Sbjct: 241 TLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIVGSAMVKLLGEAQSPEEGLKAL 300

Query: 301 ESFTKSLKSAL 312
           E+FTKSL SAL
Sbjct: 301 ENFTKSLTSAL 311

[Close]

BLAST of CmoCh19G000540 vs. NCBI nr
Match: gi|659130730|ref|XP_008465320.1| (PREDICTED: tryptophan synthase alpha chain-like [Cucumis melo])

HSP 1 Score: 508.1 bits (1307), Expect = 1.1e-140
Identity = 263/312 (84.29%), Postives = 280/312 (89.74%), Query Frame = 1


Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTVSNAIGLSETFSKLKE 60
           MDIAF  S +L LNKIP  L+F   P KISV Q+KRF PMAAL     +GLSETF KL+E
Sbjct: 1   MDIAFKPSRILPLNKIPNTLIFSPRPCKISVSQTKRFAPMAALAAYPVVGLSETFKKLRE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVA IPYITAGDPDLSTTAEALKVLS  GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           R TNF+AIISMLK VIPELSCPI+LF+YYNPILKRGVENFMM I+D GV GLVVPDVPLE
Sbjct: 121 RETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGVENFMMIIKDTGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETE+LRKEAVK+NIELVLLTTPTTPK+RMK IVEASEGFVYLVSS+GVTG RTSVS RVQ
Sbjct: 181 ETEVLRKEAVKHNIELVLLTTPTTPKERMKKIVEASEGFVYLVSSIGVTGTRTSVSGRVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEE+KE TEKPVAVGFGISKPEHVKQVA WGADGII+GSAMVKLLGEAQ+PEEGLK L
Sbjct: 241 TLLEEVKEVTEKPVAVGFGISKPEHVKQVAEWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300

Query: 301 ESFTKSLKSALS 313
           E+FTKSLKSALS
Sbjct: 301 ENFTKSLKSALS 312

[Close]

BLAST of CmoCh19G000540 vs. NCBI nr
Match: gi|449446897|ref|XP_004141207.1| (PREDICTED: tryptophan synthase alpha chain [Cucumis sativus])

HSP 1 Score: 503.4 bits (1295), Expect = 2.8e-139
Identity = 262/312 (83.97%), Postives = 279/312 (89.42%), Query Frame = 1


Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTVSNAIGLSETFSKLKE 60
           MDIAF SS +L LNKIP  L+F   P KISV QSKRF PMAAL     +GLSETF  L+E
Sbjct: 1   MDIAFKSSRILPLNKIPNTLIFSPRPCKISVSQSKRFAPMAALAAYPVVGLSETFKNLRE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVA IPYITAGDPDLSTTAEALKVLS  GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVALIPYITAGDPDLSTTAEALKVLSKCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           R TNF+AIISMLK VIPELS PI+LF+YYNPILKRGVENFMM I+D GV GLVVPDVPLE
Sbjct: 121 RETNFNAIISMLKGVIPELSRPISLFTYYNPILKRGVENFMMIIKDTGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETE+LRKEAVK+NIELVLLTTPTTPK+RMK IVEASEGFVYLVSS+GVTG RTSVS RVQ
Sbjct: 181 ETEVLRKEAVKHNIELVLLTTPTTPKERMKNIVEASEGFVYLVSSIGVTGTRTSVSSRVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEE+KE TEKPVAVGFGISKPEHVKQVA WGADGII+GSAMVKLLGEAQ+PEEGLK L
Sbjct: 241 TLLEEVKEVTEKPVAVGFGISKPEHVKQVAEWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300

Query: 301 ESFTKSLKSALS 313
           E+FT+SLKSALS
Sbjct: 301 ENFTRSLKSALS 312

[Close]

BLAST of CmoCh19G000540 vs. NCBI nr
Match: gi|659096914|ref|XP_008449353.1| (PREDICTED: tryptophan synthase alpha chain-like isoform X2 [Cucumis melo])

HSP 1 Score: 488.8 bits (1257), Expect = 7.0e-135
Identity = 252/273 (92.31%), Postives = 266/273 (97.44%), Query Frame = 1


Query: 40  MAALTVSNAIGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGV 99
           MA+LT S+A+GLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLS  GSDIIELGV
Sbjct: 1   MASLTASSAVGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGV 60

Query: 100 PYSDPLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVEN 159
           PYSDPLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRG+ N
Sbjct: 61  PYSDPLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGN 120

Query: 160 FMMTIRDAGVHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGF 219
           FM+TI+DAGV GLVVPDVPLEETEILRKEAVK+NIELVLLTTPTTP+DRMKAIVEASEGF
Sbjct: 121 FMLTIKDAGVQGLVVPDVPLEETEILRKEAVKHNIELVLLTTPTTPRDRMKAIVEASEGF 180

Query: 220 VYLVSSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIV 279
           VYLVSSVGVTGAR SVS++VQTLLEEIKE TEKPVAVGFGISKPEHVKQV++WGADGIIV
Sbjct: 181 VYLVSSVGVTGARASVSNKVQTLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIV 240

Query: 280 GSAMVKLLGEAQTPEEGLKALESFTKSLKSALS 313
           GSAMVKLLGEAQ+PEEGLKALE+FTKSLKSALS
Sbjct: 241 GSAMVKLLGEAQSPEEGLKALENFTKSLKSALS 273

The following BLAST results are available for this feature:

BLAST of CmoCh19G000540 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TRPA1_ARATH	1.9e-119	80.22	Tryptophan synthase alpha chain OS=Arabidopsis thaliana GN=TRPA1 PE=1 SV=2	[more]
TRPA2_ARATH	1.7e-117	75.62	Tryptophan synthase alpha chain, chloroplastic OS=Arabidopsis thaliana GN=TSA1 P...	[more]
TRPA_MAIZE	4.2e-87	59.77	Indole-3-glycerol phosphate lyase, chloroplastic OS=Zea mays GN=BX1 PE=1 SV=2	[more]
TRPA_CYAP8	4.8e-83	59.00	Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 8801) GN=trpA PE=3...	[more]
TRPA_CYAP4	2.6e-81	56.44	Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141)...	[more]

BLAST of CmoCh19G000540 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKV4_CUCSA	6.0e-149	88.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G225330 PE=3 SV=1	[more]
A0A0A0LD81_CUCSA	1.9e-139	83.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G843770 PE=3 SV=1	[more]
A0A067JC03_JATCU	9.0e-129	79.02	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21847 PE=3 SV=1	[more]
A0A061DQA0_THECC	7.6e-128	83.27	Aldolase-type TIM barrel family protein OS=Theobroma cacao GN=TCM_004218 PE=3 SV...	[more]
B9S4R8_RICCO	3.8e-127	77.45	Trytophan synthase alpha subunit, putative OS=Ricinus communis GN=RCOM_0991580 P...	[more]

BLAST of CmoCh19G000540 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02610.1	1.0e-120	80.22	Aldolase-type TIM barrel family protein	[more]
AT3G54640.1	9.8e-119	75.62	tryptophan synthase alpha chain	[more]

BLAST of CmoCh19G000540 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096912\|ref\|XP_008449352.1\|	7.7e-150	89.10	PREDICTED: tryptophan synthase alpha chain-like isoform X1 [Cucumis melo]	[more]
gi\|449455268\|ref\|XP_004145375.1\|	8.6e-149	88.75	PREDICTED: tryptophan synthase alpha chain-like isoform X1 [Cucumis sativus]	[more]
gi\|659130730\|ref\|XP_008465320.1\|	1.1e-140	84.29	PREDICTED: tryptophan synthase alpha chain-like [Cucumis melo]	[more]
gi\|449446897\|ref\|XP_004141207.1\|	2.8e-139	83.97	PREDICTED: tryptophan synthase alpha chain [Cucumis sativus]	[more]
gi\|659096914\|ref\|XP_008449353.1\|	7.0e-135	92.31	PREDICTED: tryptophan synthase alpha chain-like isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002028	Trp_synthase_suA
IPR011060	RibuloseP-bd_barrel
IPR013785	Aldolase_TIM
IPR018204	Trp_synthase_alpha_AS

Vocabulary: **Molecular Function**
Term	Definition
GO:0004834	tryptophan synthase activity
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006568	tryptophan metabolic process
GO:0008152	metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009094	L-phenylalanine biosynthetic process
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0006571	tyrosine biosynthetic process
biological_process	GO:0008152	metabolic process
biological_process	GO:0006568	tryptophan metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004834	tryptophan synthase activity
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G000540.1	CmoCh19G000540.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002028	Tryptophan synthase, alpha chain	HAMAP	MF_00131	Trp_synth_alpha	coord: 61..310 score: 37
IPR002028	Tryptophan synthase, alpha chain	PFAM	PF00290	Trp_syntA	coord: 55..310 score: 7.6
IPR002028	Tryptophan synthase, alpha chain	TIGRFAMs	TIGR00262	TIGR00262	coord: 55..308 score: 1.4
IPR011060	Ribulose-phosphate binding barrel	unknown	SSF51366	Ribulose-phoshate binding barrel	coord: 51..292 score: 1.22
IPR013785	Aldolase-type TIM barrel	GENE3D	G3DSA:3.20.20.70		coord: 51..311 score: 1.5E
IPR018204	Tryptophan synthase, alpha chain, active site	PROSITE	PS00167	TRP_SYNTHASE_ALPHA	coord: 95..108 scor
None	No IPR available	unknown	Coil	Coil	coord: 232..252 scor
None	No IPR available	PANTHER	PTHR10314	SER/THR DEHYDRATASE, TRP SYNTHASE	coord: 44..98 score: 1.3E-54coord: 121..199 score: 1.3
None	No IPR available	PANTHER	PTHR10314:SF88	TRYPTOPHAN SYNTHASE ALPHA CHAIN-RELATED	coord: 44..98 score: 1.3E-54coord: 121..199 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G000540	CmaCh19G000550	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G000540	Cla006022	Watermelon (97103) v1	cmowmB485
CmoCh19G000540	Csa2G225330	Cucumber (Chinese Long) v2	cmocuB498
CmoCh19G000540	MELO3C014311	Melon (DHL92) v3.5.1	cmomeB464
CmoCh19G000540	ClCG07G000590	Watermelon (Charleston Gray)	cmowcgB466
CmoCh19G000540	CSPI02G11250	Wild cucumber (PI 183967)	cmocpiB504
CmoCh19G000540	Lsi05G009710	Bottle gourd (USVL1VR-Ls)	cmolsiB470
CmoCh19G000540	Cp4.1LG15g00470	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G000540	MELO3C014311.2	Melon (DHL92) v3.6.1	cmomedB537
CmoCh19G000540	CsaV3_2G013730	Cucumber (Chinese Long) v3	cmocucB0596
CmoCh19G000540	Cla97C07G128890	Watermelon (97103) v2	cmowmbB521
CmoCh19G000540	Bhi05G000202	Wax gourd	cmowgoB0654
CmoCh19G000540	CsGy2G011290	Cucumber (Gy14) v2	cgybcmoB207
CmoCh19G000540	Carg16853	Silver-seed gourd	carcmoB1021

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G000540	Cucurbita pepo (Zucchini)	cmocpeB498
CmoCh19G000540	Cucumber (Gy14) v2	cgybcmoB765
CmoCh19G000540	Cucumber (Chinese Long) v3	cmocucB0620
CmoCh19G000540	Cucurbita moschata (Rifu)	cmocmoB387
CmoCh19G000540	Cucurbita maxima (Rimu)	cmacmoB598