Carg16853 (gene) Silver-seed gourd

Overview
NameCarg16853
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptiontryptophan synthase alpha chain
LocationCucurbita_argyrosperma_scaffold_105 : 310857 .. 315047 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAATCCAGCCGCCAAAATTTCTCGCGCAGCTGTCCTTCATTTTTCGGACAGAACGAGGTCGATGCGCCGGAGAGATTTCTTCATTTTTGATGCAGCCATTGGATATCGAAACTGAACTTCTCAGGTTCAAGGTAAGATTTCATTTTCTTTCTTATATTTGAATTTCAAAAGTTTTTGATCGCAACTGGACTGTAATCGGAGACAAACCCATTTGTCAATCCAAAAATTCCACCAAACCTTCTCTTGTTTTGATTCGAATTTGAAATTCAGTGAACTCCCGACCGTCATTTACCCCAAATGGACATTGCTTTCAATTCTTCGTCGTTACTTCGATTGAACAAGATTCCCACTGCCCTTGTCTTTCCCACTCATCCTCGTAAGATTTCAGTCGTCCAATCCAAGCGGTTTGTTCCAATGGCGGCCCTTACAGCCTCCAATGCTATAGGACTGTCGGAAACATTCAGCAAATTGAAGGAACAGGGCAAGGTAAATTTGTTCAACCGTTTATGATCTCCAACTTTAATTTTTTGACATTTCGTTTCTGGGTTGTTTGTTTATATTTGCTCTTGTTTTGTTGAATTATACTTCTTCTGAATTTTGGTGTTCACTGTTTGATACTCTTGAGAGTCCTCATTTCAATTCAATCTAATCAATCCAAGTCTTTACTGGGTTAAATTCTTTCACCAATGCTTAATTGGGATTGATCACGAGATGGGTTAGAGTTCTTCATTCATCAATGTTGTTCTAAATTCATACATGTTTTAAAGGTCGCATTTATCCCCTACATAACTGCTGGTGATCCTGATCTTTCCACCACGGCTGAGGCATTGAAGGTTCTTTCCAACCATGGATCAGATATAATTGAACTTGGTGTTCCATATTCAGATCCCTTGGCAGATGGCCCTGTTATACAGGTTGAATATCTCTCTATCTCTCTTCATTTTTTTCATTCTTAATGTATTGTTCCTTATTCAATTGTCTTTGAATGCGTTCTGTAGGCTGCAGCGACTCGGTCCTTGGCTAGGGGGACAAACTTTAGTGCAATCATTTCTATGCTGAAGGAGGTACTCTCGTTGTACCATGAAACGTGCTGTATATAATATTAATAGTTTTTCCTCTTCCAATTTTGATCTCAAATTATTTTAGGTAATAGAAAGAATAACCCAAAATTATTTCATTTGTCACTTATATAACGACTTAACGCACACCAAATGTGTTATTTTGCGAACTAGGTATAATGAGGTATAGTAACCTAGTCATTAAAATTTAAGGTTGTCGTTTGAGAATTTGTTTAATTAGATAATACTGGAACGGAGTCACACTAGAAGCTGCATTTCACCAGGCTGTAAAATTTGTCTTTCCTTTAACGAAGAAATAGGTACGTGTATACTTAAATTAGCTCTTGCACTTCTTTTTCGTTAGGAAACTTGAGTTCTCGTGCACGGCATCATCAAATTAAATGTCTTTTGGAATAAGCTTCTGTCTCTATATGCTTCACTGCCATTTAGTTTCTCATTAATGGAATTGAAAGTTGACATATTTTTGTTTTGTTTCCGGCTGCTTAGGTTATTCCTGAACTGTCTTGCCCAATTGCCCTTTTTTCATACTATAACCCAATTCTTAAGCGTGGCGTCGAGAACTTCATGATGACAATAAGAGATGCTGGTGTACATGGTAATTAATGAATTAACCCAATCTTTTACAATGAATTATGTTCAAACTTTTTATCAATTTTTTTTGCCCTACTTTCAAGATAACATGACAATTAGGTCAATTGTCTGGTACTAAATGTTATGGGTTGGCATTTGTTCTAACTTGCATAGAAACATTGGTTTATTTACTAGAACATCATTAAATTGTCATTTTCTTTAACCCAGAGAACGGTACAAAACTGAAGTATGTATTAAATTGTCATTATATCATTGCTTAATGAACATGATATTCCAAAATCCTTGTTTCAAATTTATATGTGCACTTGGTGTGAGGTTCTAATGAGCTTGTTTCTGAAATCATGAACTTTGCGAACAACTTCTTGTCTCTTAATGAGAAAAGAGAGGACAGAGGCATATAGGAAGATTATCTGTCTGCTTCACTATTATGTGATTATCTAACTTAATATCATCAACTTCGTGATGAGTCAATGACTATTTGAAAGTGAATAATGTTACAACTCTAAATGTAATTTTTCTTGCTTTACAAACTTCCATGGAAAGAAACCTTTCTGAATCTTCGGTTCGTGAATATGTTTGTAATTACATTGCACTTTCTTGCAGGGCTTGTTGTTCCGGACGTTCCTCTGGAAGAGACTGAAATTTTGAGAAAAGAAGCTGTAAAGTACAACATCGAGCTGGTGAATTCCTTTTCTCATAATGGTTGTATTATCTAAATTGATTATTAGTTTTAGGTTTTTGATATTTATTTATGATTTTTACTTAAAGATATTGCACATAGTGGCAAAAACAACCTCTGAAATGGACCTAGCAAATGGAACAGTCCAAAGATCTTGATAACTTCCCCGTTGATTCCACACGTAAATTAGGGACATAATCTGCAGTGCTGAAGATTAGTATATTATTACTTGGTTGAACCTGCAGAGTATCCAGTTTTCTTGATCAGGATTGTTAAGGCGGAAAACAGTTGCCTTGAGTACTGAAAATTATTTGATTGTTGAACTGTACTTCCCTGCATTCTTTTCATATCTATAGAATGAAATTATTAAGGTAAAAAGTAGCCAATCCGACTCGTTTGTCTAAAGATAGGATGATTAGTTGTTATATATCATCCATTTGTGTGGTAATGCTTTGTTCACGAAATCAGAAAAACGGGCGAAATCTGAAGAACAGGTGGAGTTGTTATACATCATCATTAGTTGTTATACATCATCCATTTGTGTGGTAATGCTTTGTTCACAAATTCAGAAGAACAGGCAGAGTGTATTGTTTCTAGATATTTGCTGGTTCTTATGGATTTTGTACTCTGCTAAAGGTACTCTTAACTACACCGACCACGCCTAAAGATAGGATGAAAGCGATCGTTGAAGCTTCAGAGGGATTTGTGTATCTTGTAAGACCTTTTTCTGTTTTTGTCTCTTTATATGCAAATAAGTTGTAGCTTTTTCTTGTTGTTCATGGTGTCATTGAACTTGAAATTGTCTTGCTTGTAACATTACCATGACGGCACATCTAGAGTGTTCCAAGATTATTTTTCAGACTGGTATTTTAACAATGTGATTATTTTCAGAACCCTCTTTTTGATGGAGTTAAGTTATAGAACAACAATAGAATTGTGTAGGAAGAAGAGAGATCGTTTTCGGTTTTGTTGGAGCATATTGCTTTAATCGCTTTGTTTTCGTGCACAAACGGAATGATAGATTGCATTGAAAGAACAAGGAGTTTTGGTGAAGATAGTAAATTACAGTTATTCTCTATGTTACTTCCTCTGTATTATACCATTGAGATCGAGTCGAAATTTCGATGTCCTTCTCTGTCAGACTTGCAATATGAAATTTGTTTTCGTTCGATTATAGGTGAGCTCCGTAGGAGTTACCGGTGCACGTACATCAGTGAGTGATCGAGTTCAAACTCTCCTTGAGGAAATCAAAGAGGTGCATCTTCTTCAGTCTTAATAACTATCTAGGATGTACTTGTAATAGCTACAGATTTGAAAGCTGATGACTTTGAAACCAATCAATAACATAAGCCTCACACTCTCTACTCTGTTTGGCAGGCAACAGAAAAACCAGTGGCAGTAGGTTTCGGTATATCAAAGCCCGAGCACGTGAAACAGGTAAAAGAATTTCGTCATACACTGAAACAGTTTACTTCTCCTGCATTTTTTCTGGATAATATGTTGTCGTGTTCGTCCATAGGTGGCCAACTGGGGGGCTGATGGGATCATAGTTGGTAGTGCTATGGTGAAGCTGTTGGGAGAAGCTCAGACTCCTGAAGAAGGATTGAAGGCACTAGAAAGCTTCACCAAATCCTTAAAATCTGCTCTCTCCTAATCAAATTTTGATGGAATAAGAGGTCAGCTAGCTCTATCACTGAAGCCTGCTAGTGTTTTACAGTCATCTTTAAATGATACTTAAAACATTTCTCTTTCTTTTTAGCTGAATAAGACTGTCAGTTTAGTTCTGTTTAAGGATATTGCTTGGTGTTTTAGCTAATATAAGTTTTGTTCTTTCTGGTTC

mRNA sequence

AATAATCCAGCCGCCAAAATTTCTCGCGCAGCTGTCCTTCATTTTTCGGACAGAACGAGGTCGATGCGCCGGAGAGATTTCTTCATTTTTGATGCAGCCATTGGATATCGAAACTGAACTTCTCAGGTTCAAGTGAACTCCCGACCGTCATTTACCCCAAATGGACATTGCTTTCAATTCTTCGTCGTTACTTCGATTGAACAAGATTCCCACTGCCCTTGTCTTTCCCACTCATCCTCGTAAGATTTCAGTCGTCCAATCCAAGCGGTTTGTTCCAATGGCGGCCCTTACAGCCTCCAATGCTATAGGACTGTCGGAAACATTCAGCAAATTGAAGGAACAGGGCAAGGTCGCATTTATCCCCTACATAACTGCTGGTGATCCTGATCTTTCCACCACGGCTGAGGCATTGAAGGTTCTTTCCAACCATGGATCAGATATAATTGAACTTGGTGTTCCATATTCAGATCCCTTGGCAGATGGCCCTGTTATACAGGCTGCAGCGACTCGGTCCTTGGCTAGGGGGACAAACTTTAGTGCAATCATTTCTATGCTGAAGGAGGTTATTCCTGAACTGTCTTGCCCAATTGCCCTTTTTTCATACTATAACCCAATTCTTAAGCGTGGCGTCGAGAACTTCATGATGACAATAAGAGATGCTGGTGTACATGGGCTTGTTGTTCCGGACGTTCCTCTGGAAGAGACTGAAATTTTGAGAAAAGAAGCTGTAAAGTACAACATCGAGCTGGTACTCTTAACTACACCGACCACGCCTAAAGATAGGATGAAAGCGATCGTTGAAGCTTCAGAGGGATTTGTGTATCTTGTGAGCTCCGTAGGAGTTACCGGTGCACGTACATCAGTGAGTGATCGAGTTCAAACTCTCCTTGAGGAAATCAAAGAGGCAACAGAAAAACCAGTGGCAGTAGGTTTCGGTATATCAAAGCCCGAGCACGTGAAACAGGTGGCCAACTGGGGGGCTGATGGGATCATAGTTGGTAGTGCTATGGTGAAGCTGTTGGGAGAAGCTCAGACTCCTGAAGAAGGATTGAAGGCACTAGAAAGCTTCACCAAATCCTTAAAATCTGCTCTCTCCTAATCAAATTTTGATGGAATAAGAGGTCAGCTAGCTCTATCACTGAAGCCTGCTAGTGTTTTACAGTCATCTTTAAATGATACTTAAAACATTTCTCTTTCTTTTTAGCTGAATAAGACTGTCAGTTTAGTTCTGTTTAAGGATATTGCTTGGTGTTTTAGCTAATATAAGTTTTGTTCTTTCTGGTTC

Coding sequence (CDS)

ATGGACATTGCTTTCAATTCTTCGTCGTTACTTCGATTGAACAAGATTCCCACTGCCCTTGTCTTTCCCACTCATCCTCGTAAGATTTCAGTCGTCCAATCCAAGCGGTTTGTTCCAATGGCGGCCCTTACAGCCTCCAATGCTATAGGACTGTCGGAAACATTCAGCAAATTGAAGGAACAGGGCAAGGTCGCATTTATCCCCTACATAACTGCTGGTGATCCTGATCTTTCCACCACGGCTGAGGCATTGAAGGTTCTTTCCAACCATGGATCAGATATAATTGAACTTGGTGTTCCATATTCAGATCCCTTGGCAGATGGCCCTGTTATACAGGCTGCAGCGACTCGGTCCTTGGCTAGGGGGACAAACTTTAGTGCAATCATTTCTATGCTGAAGGAGGTTATTCCTGAACTGTCTTGCCCAATTGCCCTTTTTTCATACTATAACCCAATTCTTAAGCGTGGCGTCGAGAACTTCATGATGACAATAAGAGATGCTGGTGTACATGGGCTTGTTGTTCCGGACGTTCCTCTGGAAGAGACTGAAATTTTGAGAAAAGAAGCTGTAAAGTACAACATCGAGCTGGTACTCTTAACTACACCGACCACGCCTAAAGATAGGATGAAAGCGATCGTTGAAGCTTCAGAGGGATTTGTGTATCTTGTGAGCTCCGTAGGAGTTACCGGTGCACGTACATCAGTGAGTGATCGAGTTCAAACTCTCCTTGAGGAAATCAAAGAGGCAACAGAAAAACCAGTGGCAGTAGGTTTCGGTATATCAAAGCCCGAGCACGTGAAACAGGTGGCCAACTGGGGGGCTGATGGGATCATAGTTGGTAGTGCTATGGTGAAGCTGTTGGGAGAAGCTCAGACTCCTGAAGAAGGATTGAAGGCACTAGAAAGCTTCACCAAATCCTTAAAATCTGCTCTCTCCTAA

Protein sequence

MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTASNAIGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKALESFTKSLKSALS
Homology
[Close]
BLAST of Carg16853 vs. NCBI nr
Match: XP_022963508.1 (tryptophan synthase alpha chain isoform X1 [Cucurbita moschata])

HSP 1 Score: 595.9 bits (1535), Expect = 8.0e-167
Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0 

Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALT SNAIGLSETFSKLKE
Sbjct: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTVSNAIGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ
Sbjct: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL
Sbjct: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300

Query: 301 ESFTKSLKSALS 313
           ESFTKSLKSALS
Sbjct: 301 ESFTKSLKSALS 312

[Close]
BLAST of Carg16853 vs. NCBI nr
Match: XP_022967507.1 (tryptophan synthase alpha chain isoform X1 [Cucurbita maxima])

HSP 1 Score: 593.2 bits (1528), Expect = 5.2e-166
Identity = 310/312 (99.36%), Postives = 311/312 (99.68%), Query Frame = 0 

Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MDIAFNSSSLLRLNKIPTALVFPTH RKISVVQSKRFVPMAALTASNAIGLSETFSKLKE
Sbjct: 1   MDIAFNSSSLLRLNKIPTALVFPTHLRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCP+ALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ
Sbjct: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL
Sbjct: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300

Query: 301 ESFTKSLKSALS 313
           ESFTKSLKSALS
Sbjct: 301 ESFTKSLKSALS 312

[Close]
BLAST of Carg16853 vs. NCBI nr
Match: XP_023554753.1 (tryptophan synthase alpha chain-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 592.8 bits (1527), Expect = 6.7e-166
Identity = 310/312 (99.36%), Postives = 311/312 (99.68%), Query Frame = 0 

Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTASNAIGLSETFSKLK+
Sbjct: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTASNAIGLSETFSKLKK 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGV GLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVQGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ
Sbjct: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL
Sbjct: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300

Query: 301 ESFTKSLKSALS 313
           ESFTKSLKSALS
Sbjct: 301 ESFTKSLKSALS 312

[Close]
BLAST of Carg16853 vs. NCBI nr
Match: XP_023554752.1 (tryptophan synthase alpha chain-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 579.7 bits (1493), Expect = 5.9e-162
Identity = 310/335 (92.54%), Postives = 311/335 (92.84%), Query Frame = 0 

Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTASNAIGLSETFSKLK+
Sbjct: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTASNAIGLSETFSKLKK 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGV GLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVQGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIEL-----------------------VLLTTPTTPKDRMKAIVEASE 240
           ETEILRKEAVKYNIEL                       VLLTTPTTPKDRMKAIVEASE
Sbjct: 181 ETEILRKEAVKYNIELAKSEEQVELLYIIISCYTSSICGVLLTTPTTPKDRMKAIVEASE 240

Query: 241 GFVYLVSSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGI 300
           GFVYLVSSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGI
Sbjct: 241 GFVYLVSSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGI 300

Query: 301 IVGSAMVKLLGEAQTPEEGLKALESFTKSLKSALS 313
           IVGSAMVKLLGEAQTPEEGLKALESFTKSLKSALS
Sbjct: 301 IVGSAMVKLLGEAQTPEEGLKALESFTKSLKSALS 335

[Close]
BLAST of Carg16853 vs. NCBI nr
Match: XP_008449352.1 (PREDICTED: tryptophan synthase alpha chain-like isoform X1 [Cucumis melo])

HSP 1 Score: 540.0 bits (1390), Expect = 5.2e-150
Identity = 279/312 (89.42%), Postives = 295/312 (94.55%), Query Frame = 0 

Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MD   NSS L + NKIPT L+FP HP KISV QSKR VPMA+LTAS+A+GLSETFSKLKE
Sbjct: 1   MDTVLNSSRLFQFNKIPTTLIFPPHPCKISVFQSKRVVPMASLTASSAVGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLS  GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRG+ NFM+TI+DAGV GLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMLTIKDAGVQGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETEILRKEAVK+NIELVLLTTPTTP+DRMKAIVEASEGFVYLVSSVGVTGAR SVS++VQ
Sbjct: 181 ETEILRKEAVKHNIELVLLTTPTTPRDRMKAIVEASEGFVYLVSSVGVTGARASVSNKVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEEIKE TEKPVAVGFGISKPEHVKQV++WGADGIIVGSAMVKLLGEAQ+PEEGLKAL
Sbjct: 241 TLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIVGSAMVKLLGEAQSPEEGLKAL 300

Query: 301 ESFTKSLKSALS 313
           E+FTKSLKSALS
Sbjct: 301 ENFTKSLKSALS 312

[Close]
BLAST of Carg16853 vs. TAIR10
Match: AT4G02610.1 (Aldolase-type TIM barrel family protein)

HSP 1 Score: 430.6 bits (1106), Expect = 8.0e-121
Identity = 215/268 (80.22%), Postives = 246/268 (91.79%), Query Frame = 0 

Query: 44  TASNAIGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSD 103
           T S+ +GLSETF++LK QGKVA IPYITAGDPDLSTTA+ALKVL + GSDIIELGVPYSD
Sbjct: 6   TPSSTVGLSETFARLKSQGKVALIPYITAGDPDLSTTAKALKVLDSCGSDIIELGVPYSD 65

Query: 104 PLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMT 163
           PLADGP IQAAA RSL +GTNF++IISMLKEVIP+LSCPIALF+YYNPIL+RGVEN+M  
Sbjct: 66  PLADGPAIQAAARRSLLKGTNFNSIISMLKEVIPQLSCPIALFTYYNPILRRGVENYMTV 125

Query: 164 IRDAGVHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLV 223
           I++AGVHGL+VPDVPLEETE LR EA K+ IELVLLTTPTTPK+RM AIVEASEGF+YLV
Sbjct: 126 IKNAGVHGLLVPDVPLEETETLRNEARKHQIELVLLTTPTTPKERMNAIVEASEGFIYLV 185

Query: 224 SSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAM 283
           SSVGVTG R SV+++VQ+LL++IKEAT KPVAVGFGISKPEHVKQVA WGADG+IVGSAM
Sbjct: 186 SSVGVTGTRESVNEKVQSLLQQIKEATSKPVAVGFGISKPEHVKQVAEWGADGVIVGSAM 245

Query: 284 VKLLGEAQTPEEGLKALESFTKSLKSAL 312
           VK+LGE+++PE+GLK LE FTKSLKSAL
Sbjct: 246 VKILGESESPEQGLKELEFFTKSLKSAL 273

[Close]
BLAST of Carg16853 vs. TAIR10
Match: AT3G54640.1 (tryptophan synthase alpha chain)

HSP 1 Score: 424.1 bits (1089), Expect = 7.5e-119
Identity = 215/283 (75.97%), Postives = 252/283 (89.05%), Query Frame = 0 

Query: 30  SVVQSKRFVPMAAL-TASNAIGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLS 89
           S +  KRF PMA+L T+S  +GL++TF++LK+QGKVAFIPYITAGDPDLSTTAEALKVL 
Sbjct: 29  SSLSFKRFTPMASLSTSSPTLGLADTFTQLKKQGKVAFIPYITAGDPDLSTTAEALKVLD 88

Query: 90  NHGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSY 149
             GSDIIELGVPYSDPLADGPVIQAAATRSL RGTN  +I+ ML +V+P++SCPI+LF+Y
Sbjct: 89  ACGSDIIELGVPYSDPLADGPVIQAAATRSLERGTNLDSILEMLDKVVPQISCPISLFTY 148

Query: 150 YNPILKRGVENFMMTIRDAGVHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDR 209
           YNPILKRG+  FM +IR  GV GLVVPDVPLEETE+LRKEA+  +IELVLLTTPTTP +R
Sbjct: 149 YNPILKRGLGKFMSSIRAVGVQGLVVPDVPLEETEMLRKEALNNDIELVLLTTPTTPTER 208

Query: 210 MKAIVEASEGFVYLVSSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQ 269
           MK IV+ASEGF+YLVSS+GVTGAR+SVS +VQ+LL++IKEAT+KPVAVGFGISKPEHVKQ
Sbjct: 209 MKLIVDASEGFIYLVSSIGVTGARSSVSGKVQSLLKDIKEATDKPVAVGFGISKPEHVKQ 268

Query: 270 VANWGADGIIVGSAMVKLLGEAQTPEEGLKALESFTKSLKSAL 312
           +A WGADG+IVGSAMVKLLG+A++P EGLK LE  TKSLKSAL
Sbjct: 269 IAGWGADGVIVGSAMVKLLGDAKSPTEGLKELEKLTKSLKSAL 311

[Close]
BLAST of Carg16853 vs. Swiss-Prot
Match: sp|O22765|TRPA1_ARATH (Tryptophan synthase alpha chain OS=Arabidopsis thaliana OX=3702 GN=TRPA1 PE=1 SV=2)

HSP 1 Score: 430.6 bits (1106), Expect = 1.4e-119
Identity = 215/268 (80.22%), Postives = 246/268 (91.79%), Query Frame = 0 

Query: 44  TASNAIGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSD 103
           T S+ +GLSETF++LK QGKVA IPYITAGDPDLSTTA+ALKVL + GSDIIELGVPYSD
Sbjct: 6   TPSSTVGLSETFARLKSQGKVALIPYITAGDPDLSTTAKALKVLDSCGSDIIELGVPYSD 65

Query: 104 PLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMT 163
           PLADGP IQAAA RSL +GTNF++IISMLKEVIP+LSCPIALF+YYNPIL+RGVEN+M  
Sbjct: 66  PLADGPAIQAAARRSLLKGTNFNSIISMLKEVIPQLSCPIALFTYYNPILRRGVENYMTV 125

Query: 164 IRDAGVHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLV 223
           I++AGVHGL+VPDVPLEETE LR EA K+ IELVLLTTPTTPK+RM AIVEASEGF+YLV
Sbjct: 126 IKNAGVHGLLVPDVPLEETETLRNEARKHQIELVLLTTPTTPKERMNAIVEASEGFIYLV 185

Query: 224 SSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAM 283
           SSVGVTG R SV+++VQ+LL++IKEAT KPVAVGFGISKPEHVKQVA WGADG+IVGSAM
Sbjct: 186 SSVGVTGTRESVNEKVQSLLQQIKEATSKPVAVGFGISKPEHVKQVAEWGADGVIVGSAM 245

Query: 284 VKLLGEAQTPEEGLKALESFTKSLKSAL 312
           VK+LGE+++PE+GLK LE FTKSLKSAL
Sbjct: 246 VKILGESESPEQGLKELEFFTKSLKSAL 273

[Close]
BLAST of Carg16853 vs. Swiss-Prot
Match: sp|Q42529|TRPA2_ARATH (Tryptophan synthase alpha chain, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TSA1 PE=1 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 1.4e-117
Identity = 215/283 (75.97%), Postives = 252/283 (89.05%), Query Frame = 0 

Query: 30  SVVQSKRFVPMAAL-TASNAIGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLS 89
           S +  KRF PMA+L T+S  +GL++TF++LK+QGKVAFIPYITAGDPDLSTTAEALKVL 
Sbjct: 29  SSLSFKRFTPMASLSTSSPTLGLADTFTQLKKQGKVAFIPYITAGDPDLSTTAEALKVLD 88

Query: 90  NHGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSY 149
             GSDIIELGVPYSDPLADGPVIQAAATRSL RGTN  +I+ ML +V+P++SCPI+LF+Y
Sbjct: 89  ACGSDIIELGVPYSDPLADGPVIQAAATRSLERGTNLDSILEMLDKVVPQISCPISLFTY 148

Query: 150 YNPILKRGVENFMMTIRDAGVHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDR 209
           YNPILKRG+  FM +IR  GV GLVVPDVPLEETE+LRKEA+  +IELVLLTTPTTP +R
Sbjct: 149 YNPILKRGLGKFMSSIRAVGVQGLVVPDVPLEETEMLRKEALNNDIELVLLTTPTTPTER 208

Query: 210 MKAIVEASEGFVYLVSSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQ 269
           MK IV+ASEGF+YLVSS+GVTGAR+SVS +VQ+LL++IKEAT+KPVAVGFGISKPEHVKQ
Sbjct: 209 MKLIVDASEGFIYLVSSIGVTGARSSVSGKVQSLLKDIKEATDKPVAVGFGISKPEHVKQ 268

Query: 270 VANWGADGIIVGSAMVKLLGEAQTPEEGLKALESFTKSLKSAL 312
           +A WGADG+IVGSAMVKLLG+A++P EGLK LE  TKSLKSAL
Sbjct: 269 IAGWGADGVIVGSAMVKLLGDAKSPTEGLKELEKLTKSLKSAL 311

[Close]
BLAST of Carg16853 vs. Swiss-Prot
Match: sp|P42390|TRPA_MAIZE (Indole-3-glycerol phosphate lyase, chloroplastic OS=Zea mays OX=4577 GN=BX1 PE=1 SV=2)

HSP 1 Score: 322.4 bits (825), Expect = 5.6e-87
Identity = 156/261 (59.77%), Postives = 202/261 (77.39%), Query Frame = 0 

Query: 51  LSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPV 110
           +S+T + L  +GK AFIPYITAGDPDL+TTAEAL++L   G+D+IELGVP SDP  DGP+
Sbjct: 90  VSDTMAALMAKGKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPI 149

Query: 111 IQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVH 170
           IQA+  R+LA GT   A++ ML+EV PELSCP+ L SYY PI+ R     +  +++AGVH
Sbjct: 150 IQASVARALASGTTMDAVLEMLREVTPELSCPVVLLSYYKPIMSRS----LAEMKEAGVH 209

Query: 171 GLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTG 230
           GL+VPD+P      L  EA   N+ELVLLTTP  P+DRMK I +ASEGFVYLVS  GVTG
Sbjct: 210 GLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTG 269

Query: 231 ARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEA 290
            R +V+ RV++L++E+K+ T KPVAVGFGISKPEHVKQ+A WGADG+I+GSAMV+ LGEA
Sbjct: 270 PRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVRQLGEA 329

Query: 291 QTPEEGLKALESFTKSLKSAL 312
            +P++GL+ LE + + +K+AL
Sbjct: 330 ASPKQGLRRLEEYARGMKNAL 346

[Close]
BLAST of Carg16853 vs. Swiss-Prot
Match: sp|B7JUK2|TRPA_CYAP8 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 8801) OX=41431 GN=trpA PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 4.9e-83
Identity = 154/261 (59.00%), Postives = 196/261 (75.10%), Query Frame = 0 

Query: 51  LSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPV 110
           +S+ F  L+++ + A IP+ITAGDPDL TTA+AL++L   G+D+IELGVPYSDPLADGPV
Sbjct: 4   VSDCFQSLRDRRQCALIPFITAGDPDLETTAKALRLLDASGADLIELGVPYSDPLADGPV 63

Query: 111 IQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVH 170
           IQAAATR+L RG     ++ ++KEV PE+  PI LF+YYNPI  RGVE F+  ++ AGV 
Sbjct: 64  IQAAATRALGRGVKLEDVLGVVKEVSPEIKAPIILFTYYNPIFYRGVEAFLQQVKAAGVQ 123

Query: 171 GLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTG 230
           GLVVPD+PLEE E L K A +  I + LL  PT+P +R++AI   S+GF+YLVS  GVTG
Sbjct: 124 GLVVPDLPLEEAESLLKPAHEVGIAVTLLVAPTSPIERIEAIARQSQGFIYLVSVTGVTG 183

Query: 231 ARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEA 290
            R+ V+ RV+ LL  ++ AT+KP+ VGFGISKPEH  QV NWGAD +IVGSAMVK L E 
Sbjct: 184 MRSQVTSRVKELLTSLRSATDKPIGVGFGISKPEHALQVKNWGADAVIVGSAMVKRLAEG 243

Query: 291 QTPEEGLKALESFTKSLKSAL 312
            TPEEGLKA+ +F + LK AL
Sbjct: 244 -TPEEGLKAIGAFCQDLKQAL 263

[Close]
BLAST of Carg16853 vs. Swiss-Prot
Match: sp|B8HPH2|TRPA_CYAP4 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=trpA PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 2.7e-81
Identity = 149/264 (56.44%), Postives = 191/264 (72.35%), Query Frame = 0 

Query: 49  IGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADG 108
           + +S  FS L+++ + A IP+ITAGDP L  TA+AL+VL   G+D+IELGVPYSDPLADG
Sbjct: 2   VSVSTCFSALRDRAQCALIPFITAGDPSLEITAKALQVLDQQGADLIELGVPYSDPLADG 61

Query: 109 PVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAG 168
           P IQAAATR+L +GT   A++ M+  V P L  P+ LF+YYNPI  RGVE F+  +  AG
Sbjct: 62  PTIQAAATRALQKGTRLDAVLEMISHVAPNLRSPLILFTYYNPIFHRGVEPFLQQVAQAG 121

Query: 169 VHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGV 228
           V GLVVPD+PLEE + +  +A    IEL LL  PTTP+ R+ AI E S+GF+YLVS+ GV
Sbjct: 122 VQGLVVPDLPLEEADTVLTQAAAVGIELTLLVAPTTPRSRIAAIAERSQGFIYLVSTTGV 181

Query: 229 TGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLG 288
           TG R+ V  RV  LL E+++ T+KP+ VGFGIS+PEH +QV  WGAD  IVGSA VK L 
Sbjct: 182 TGMRSKVEGRVHELLLELQQVTDKPIGVGFGISQPEHARQVMEWGADAAIVGSAFVKRLA 241

Query: 289 EAQTPEEGLKALESFTKSLKSALS 313
           E  TPE+GL A+  F +SLK+AL+
Sbjct: 242 EG-TPEQGLAAIADFCRSLKTALT 264

[Close]
BLAST of Carg16853 vs. TrEMBL
Match: tr|A0A1S3BMG6|A0A1S3BMG6_CUCME (tryptophan synthase alpha chain-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491257 PE=3 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 3.4e-150
Identity = 279/312 (89.42%), Postives = 295/312 (94.55%), Query Frame = 0 

Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MD   NSS L + NKIPT L+FP HP KISV QSKR VPMA+LTAS+A+GLSETFSKLKE
Sbjct: 1   MDTVLNSSRLFQFNKIPTTLIFPPHPCKISVFQSKRVVPMASLTASSAVGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLS  GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRG+ NFM+TI+DAGV GLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMLTIKDAGVQGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETEILRKEAVK+NIELVLLTTPTTP+DRMKAIVEASEGFVYLVSSVGVTGAR SVS++VQ
Sbjct: 181 ETEILRKEAVKHNIELVLLTTPTTPRDRMKAIVEASEGFVYLVSSVGVTGARASVSNKVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEEIKE TEKPVAVGFGISKPEHVKQV++WGADGIIVGSAMVKLLGEAQ+PEEGLKAL
Sbjct: 241 TLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIVGSAMVKLLGEAQSPEEGLKAL 300

Query: 301 ESFTKSLKSALS 313
           E+FTKSLKSALS
Sbjct: 301 ENFTKSLKSALS 312

[Close]
BLAST of Carg16853 vs. TrEMBL
Match: tr|A0A0A0LKV4|A0A0A0LKV4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G225330 PE=3 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 4.9e-149
Identity = 277/311 (89.07%), Postives = 294/311 (94.53%), Query Frame = 0 

Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MDI  NSS L + NKIPT L+FP HP KISV QSKR VPMA+LTAS+A+GLSETFSKLKE
Sbjct: 1   MDIVLNSSRLFQFNKIPTTLIFPPHPCKISVFQSKRVVPMASLTASSAVGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLS  GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRG+ NFM+TI+DAGV GLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMLTIKDAGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETEILRKEAVK++IELVLLTTPTTP+DRMKAIVEASEGFVYLVSSVGVTGAR SVS++VQ
Sbjct: 181 ETEILRKEAVKHSIELVLLTTPTTPRDRMKAIVEASEGFVYLVSSVGVTGARASVSNKVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEEIKE TEKPVAVGFGISKPEHVKQV++WGADGIIVGSAMVKLLGEAQ+PEEGLKAL
Sbjct: 241 TLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIVGSAMVKLLGEAQSPEEGLKAL 300

Query: 301 ESFTKSLKSAL 312
           E+FTKSL SAL
Sbjct: 301 ENFTKSLTSAL 311

[Close]
BLAST of Carg16853 vs. TrEMBL
Match: tr|A0A1S3CNL8|A0A1S3CNL8_CUCME (tryptophan synthase alpha chain-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502969 PE=3 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 5.0e-141
Identity = 264/312 (84.62%), Postives = 281/312 (90.06%), Query Frame = 0 

Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MDIAF  S +L LNKIP  L+F   P KISV Q+KRF PMAAL A   +GLSETF KL+E
Sbjct: 1   MDIAFKPSRILPLNKIPNTLIFSPRPCKISVSQTKRFAPMAALAAYPVVGLSETFKKLRE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVA IPYITAGDPDLSTTAEALKVLS  GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           R TNF+AIISMLK VIPELSCPI+LF+YYNPILKRGVENFMM I+D GV GLVVPDVPLE
Sbjct: 121 RETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGVENFMMIIKDTGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETE+LRKEAVK+NIELVLLTTPTTPK+RMK IVEASEGFVYLVSS+GVTG RTSVS RVQ
Sbjct: 181 ETEVLRKEAVKHNIELVLLTTPTTPKERMKKIVEASEGFVYLVSSIGVTGTRTSVSGRVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEE+KE TEKPVAVGFGISKPEHVKQVA WGADGII+GSAMVKLLGEAQ+PEEGLK L
Sbjct: 241 TLLEEVKEVTEKPVAVGFGISKPEHVKQVAEWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300

Query: 301 ESFTKSLKSALS 313
           E+FTKSLKSALS
Sbjct: 301 ENFTKSLKSALS 312

[Close]
BLAST of Carg16853 vs. TrEMBL
Match: tr|A0A0A0LD81|A0A0A0LD81_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G843770 PE=3 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 1.2e-139
Identity = 263/312 (84.29%), Postives = 280/312 (89.74%), Query Frame = 0 

Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MDIAF SS +L LNKIP  L+F   P KISV QSKRF PMAAL A   +GLSETF  L+E
Sbjct: 1   MDIAFKSSRILPLNKIPNTLIFSPRPCKISVSQSKRFAPMAALAAYPVVGLSETFKNLRE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVA IPYITAGDPDLSTTAEALKVLS  GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVALIPYITAGDPDLSTTAEALKVLSKCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           R TNF+AIISMLK VIPELS PI+LF+YYNPILKRGVENFMM I+D GV GLVVPDVPLE
Sbjct: 121 RETNFNAIISMLKGVIPELSRPISLFTYYNPILKRGVENFMMIIKDTGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETE+LRKEAVK+NIELVLLTTPTTPK+RMK IVEASEGFVYLVSS+GVTG RTSVS RVQ
Sbjct: 181 ETEVLRKEAVKHNIELVLLTTPTTPKERMKNIVEASEGFVYLVSSIGVTGTRTSVSSRVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEE+KE TEKPVAVGFGISKPEHVKQVA WGADGII+GSAMVKLLGEAQ+PEEGLK L
Sbjct: 241 TLLEEVKEVTEKPVAVGFGISKPEHVKQVAEWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300

Query: 301 ESFTKSLKSALS 313
           E+FT+SLKSALS
Sbjct: 301 ENFTRSLKSALS 312

[Close]
BLAST of Carg16853 vs. TrEMBL
Match: tr|A0A1S4E560|A0A1S4E560_CUCME (tryptophan synthase alpha chain-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502969 PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 3.9e-138
Identity = 262/312 (83.97%), Postives = 279/312 (89.42%), Query Frame = 0 

Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MDIAF  S +L LNKIP  L+F   P KISV Q+KRF PMAAL A   +GLSETF KL+E
Sbjct: 1   MDIAFKPSRILPLNKIPNTLIFSPRPCKISVSQTKRFAPMAALAAYPVVGLSETFKKLRE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVA IPYITAGDPDLSTTAEALKVLS  GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           R TNF+AIISMLK VIPELSCPI+LF+YYNPILKRGVENFMM I+D    GLVVPDVPLE
Sbjct: 121 RETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGVENFMMIIKDT---GLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETE+LRKEAVK+NIELVLLTTPTTPK+RMK IVEASEGFVYLVSS+GVTG RTSVS RVQ
Sbjct: 181 ETEVLRKEAVKHNIELVLLTTPTTPKERMKKIVEASEGFVYLVSSIGVTGTRTSVSGRVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEE+KE TEKPVAVGFGISKPEHVKQVA WGADGII+GSAMVKLLGEAQ+PEEGLK L
Sbjct: 241 TLLEEVKEVTEKPVAVGFGISKPEHVKQVAEWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300

Query: 301 ESFTKSLKSALS 313
           E+FTKSLKSALS
Sbjct: 301 ENFTKSLKSALS 309

The following BLAST results are available for this feature:
BLAST of Carg16853 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022963508.18.0e-16799.68tryptophan synthase alpha chain isoform X1 [Cucurbita moschata][more]
XP_022967507.15.2e-16699.36tryptophan synthase alpha chain isoform X1 [Cucurbita maxima][more]
XP_023554753.16.7e-16699.36tryptophan synthase alpha chain-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023554752.15.9e-16292.54tryptophan synthase alpha chain-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_008449352.15.2e-15089.42PREDICTED: tryptophan synthase alpha chain-like isoform X1 [Cucumis melo][more]
BLAST of Carg16853 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G02610.18.0e-12180.22Aldolase-type TIM barrel family protein[more]
AT3G54640.17.5e-11975.97tryptophan synthase alpha chain[more]
BLAST of Carg16853 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O22765|TRPA1_ARATH1.4e-11980.22Tryptophan synthase alpha chain OS=Arabidopsis thaliana OX=3702 GN=TRPA1 PE=1 SV... [more]
sp|Q42529|TRPA2_ARATH1.4e-11775.97Tryptophan synthase alpha chain, chloroplastic OS=Arabidopsis thaliana OX=3702 G... [more]
sp|P42390|TRPA_MAIZE5.6e-8759.77Indole-3-glycerol phosphate lyase, chloroplastic OS=Zea mays OX=4577 GN=BX1 PE=1... [more]
sp|B7JUK2|TRPA_CYAP84.9e-8359.00Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 8801) OX=41431 GN=... [more]
sp|B8HPH2|TRPA_CYAP42.7e-8156.44Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141)... [more]
BLAST of Carg16853 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BMG6|A0A1S3BMG6_CUCME3.4e-15089.42tryptophan synthase alpha chain-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0LKV4|A0A0A0LKV4_CUCSA4.9e-14989.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G225330 PE=3 SV=1[more]
tr|A0A1S3CNL8|A0A1S3CNL8_CUCME5.0e-14184.62tryptophan synthase alpha chain-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0LD81|A0A0A0LD81_CUCSA1.2e-13984.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G843770 PE=3 SV=1[more]
tr|A0A1S4E560|A0A1S4E560_CUCME3.9e-13883.97tryptophan synthase alpha chain-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0006568tryptophan metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004834tryptophan synthase activity
Vocabulary: INTERPRO
TermDefinition
IPR011060RibuloseP-bd_barrel
IPR018204Trp_synthase_alpha_AS
IPR013785Aldolase_TIM
IPR002028Trp_synthase_suA
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0006568 tryptophan metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004834 tryptophan synthase activity
molecular_function GO:0003824 catalytic activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16853-RACarg16853-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 232..252
NoneNo IPR availablePANTHERPTHR43406:SF4TRYPTOPHAN SYNTHASE ALPHA CHAINcoord: 1..312
NoneNo IPR availablePANTHERPTHR43406FAMILY NOT NAMEDcoord: 1..312
IPR002028Tryptophan synthase, alpha chainPFAMPF00290Trp_syntAcoord: 55..310
e-value: 7.8E-96
score: 319.8
IPR002028Tryptophan synthase, alpha chainTIGRFAMTIGR00262TIGR00262coord: 55..308
e-value: 1.4E-95
score: 316.9
IPR002028Tryptophan synthase, alpha chainHAMAPMF_00131Trp_synth_alphacoord: 61..310
score: 37.037
IPR002028Tryptophan synthase, alpha chainCDDcd04724Tryptophan_synthase_alphacoord: 65..308
e-value: 7.19733E-117
score: 339.067
IPR013785Aldolase-type TIM barrelGENE3DG3DSA:3.20.20.70coord: 50..312
e-value: 2.2E-109
score: 366.4
IPR018204Tryptophan synthase, alpha chain, active sitePROSITEPS00167TRP_SYNTHASE_ALPHAcoord: 95..108
IPR011060Ribulose-phosphate binding barrelSUPERFAMILYSSF51366Ribulose-phoshate binding barrelcoord: 51..292

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg16853Cla006022Watermelon (97103) v1carwmB0750
Carg16853Csa2G225330Cucumber (Chinese Long) v2carcuB0765
Carg16853MELO3C014311Melon (DHL92) v3.5.1carmeB0746
Carg16853ClCG07G000590Watermelon (Charleston Gray)carwcgB0730
Carg16853CSPI02G11250Wild cucumber (PI 183967)carcpiB0782
Carg16853CmaCh19G000550Cucurbita maxima (Rimu)carcmaB1049
Carg16853CmoCh19G000540Cucurbita moschata (Rifu)carcmoB1021
Carg16853Lsi05G009710Bottle gourd (USVL1VR-Ls)carlsiB689
Carg16853Cp4.1LG15g00470Cucurbita pepo (Zucchini)carcpeB1057
Carg16853CsGy2G011290Cucumber (Gy14) v2carcgybB0744
Carg16853MELO3C014311.2Melon (DHL92) v3.6.1carmedB0759
Carg16853CsaV3_2G013730Cucumber (Chinese Long) v3carcucB0785
Carg16853Cla97C07G128890Watermelon (97103) v2carwmbB0788
Carg16853Bhi05G000202Wax gourdcarwgoB0888
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg16853Silver-seed gourdcarcarB262
Carg16853Silver-seed gourdcarcarB599
Carg16853Cucumber (Gy14) v2carcgybB0749
Carg16853Cucurbita maxima (Rimu)carcmaB1052
Carg16853Cucurbita maxima (Rimu)carcmaB1051
Carg16853Cucurbita moschata (Rifu)carcmoB1023
Carg16853Cucurbita moschata (Rifu)carcmoB1025
Carg16853Cucurbita pepo (Zucchini)carcpeB1058
Carg16853Cucurbita pepo (Zucchini)carcpeB1062
Carg16853Wild cucumber (PI 183967)carcpiB0789
Carg16853Cucumber (Chinese Long) v2carcuB0771
Carg16853Cucumber (Chinese Long) v3carcucB0792
Carg16853Bottle gourd (USVL1VR-Ls)carlsiB687
Carg16853Watermelon (Charleston Gray)carwcgB0728
Carg16853Watermelon (97103) v1carwmB0753
Carg16853Watermelon (97103) v2carwmbB0787