CmoCh18G013490 (gene) Cucurbita moschata (Rifu)

NameCmoCh18G013490
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr18 : 12751855 .. 12752373 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCAAAAATGGAGGCTTTTTGCACCATTCCTCGCTTTCCCCTCATCTGGGTTATCTCGTCTTTGCATCTCCTTTCTCTCATCTGGGTTATCTCTTCTTTGCATCTTCTTTCTCTCATCTGGGTTATCTCTTCTTTGCACGTTTAAGCATTAAACTGAGCGGTATTGTAAAACAGTAGCCGCCATTTGTGCTGCAAAACTGTGTAATGTGGAAGTTAACAGGTGGGATAACGAGGAAGGAAAGAGGCTGGAATTTCTATTGTTAATGTAAATGGTAATGAATGGTCAATGATTGTTGATGATTTAATGTGGTTTATAAATGGAAAGAGACCCATTCTTTTGTTTTGTCTGTGGATAACTTGTCGCCTATTTTAGAATGCAAAAGTTGTCAGCCTCAGAATGGATTCCGCCATTGTCTAATATTGCAAGCTTAGTGAACGGTGCTCCGTTCACCGTCTTCCCCCATCCTAATCTCCGATATTTTCACTACTATTTCGTCGATGGCTTCTGTAGATAA

mRNA sequence

ATGTTGCAAAAATGGAGGCTTTTTGCACCATTCCTCGCTTTCCCCTCATCTGGGTTATCTCGTCTTTGCATCTCCTTTCTCTCATCTGGGTTATCTCTTCTTTGCATCTTCTTTCTCTCATCTGGGTTATCTCTTCTTTGCACGTGGGATAACGAGGAAGGAAAGAGGCTGGAATTTCTATTGTTAATAATGCAAAAGTTGTCAGCCTCAGAATGGATTCCGCCATTGTCTAATATTGCAAGCTTAGTGAACGGTGCTCCGTTCACCGTCTTCCCCCATCCTAATCTCCGATATTTTCACTACTATTTCGTCGATGGCTTCTGTAGATAA

Coding sequence (CDS)

ATGTTGCAAAAATGGAGGCTTTTTGCACCATTCCTCGCTTTCCCCTCATCTGGGTTATCTCGTCTTTGCATCTCCTTTCTCTCATCTGGGTTATCTCTTCTTTGCATCTTCTTTCTCTCATCTGGGTTATCTCTTCTTTGCACGTGGGATAACGAGGAAGGAAAGAGGCTGGAATTTCTATTGTTAATAATGCAAAAGTTGTCAGCCTCAGAATGGATTCCGCCATTGTCTAATATTGCAAGCTTAGTGAACGGTGCTCCGTTCACCGTCTTCCCCCATCCTAATCTCCGATATTTTCACTACTATTTCGTCGATGGCTTCTGTAGATAA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000488Death domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G013490.1CmoCh18G013490.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000488Death domainPROFILEPS50017DEATH_DOMAINcoord: 1..80
score: 8

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh18G013490CmaCh18G013190Cucurbita maxima (Rimu)cmacmoB406
CmoCh18G013490Carg20339Silver-seed gourdcarcmoB0732
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh18G013490Cucurbita moschata (Rifu)cmocmoB243
CmoCh18G013490Cucurbita moschata (Rifu)cmocmoB275
CmoCh18G013490Cucurbita moschata (Rifu)cmocmoB274
CmoCh18G013490Cucurbita moschata (Rifu)cmocmoB333
CmoCh18G013490Cucumber (Gy14) v1cgycmoB0008
CmoCh18G013490Cucumber (Gy14) v1cgycmoB0009
CmoCh18G013490Cucumber (Gy14) v1cgycmoB0602
CmoCh18G013490Cucurbita maxima (Rimu)cmacmoB292
CmoCh18G013490Cucurbita maxima (Rimu)cmacmoB326
CmoCh18G013490Cucurbita maxima (Rimu)cmacmoB327
CmoCh18G013490Cucurbita maxima (Rimu)cmacmoB591
CmoCh18G013490Wild cucumber (PI 183967)cmocpiB414
CmoCh18G013490Wild cucumber (PI 183967)cmocpiB402
CmoCh18G013490Wild cucumber (PI 183967)cmocpiB405
CmoCh18G013490Cucumber (Chinese Long) v2cmocuB399
CmoCh18G013490Cucumber (Chinese Long) v2cmocuB401
CmoCh18G013490Cucumber (Chinese Long) v2cmocuB409
CmoCh18G013490Melon (DHL92) v3.5.1cmomeB341
CmoCh18G013490Melon (DHL92) v3.5.1cmomeB369
CmoCh18G013490Melon (DHL92) v3.5.1cmomeB368
CmoCh18G013490Watermelon (Charleston Gray)cmowcgB344
CmoCh18G013490Watermelon (Charleston Gray)cmowcgB359
CmoCh18G013490Watermelon (Charleston Gray)cmowcgB362
CmoCh18G013490Watermelon (97103) v1cmowmB366
CmoCh18G013490Watermelon (97103) v1cmowmB369
CmoCh18G013490Watermelon (97103) v1cmowmB380
CmoCh18G013490Cucurbita pepo (Zucchini)cmocpeB376
CmoCh18G013490Cucurbita pepo (Zucchini)cmocpeB384
CmoCh18G013490Cucurbita pepo (Zucchini)cmocpeB385
CmoCh18G013490Cucurbita pepo (Zucchini)cmocpeB386
CmoCh18G013490Cucurbita pepo (Zucchini)cmocpeB414
CmoCh18G013490Bottle gourd (USVL1VR-Ls)cmolsiB373
CmoCh18G013490Bottle gourd (USVL1VR-Ls)cmolsiB351
CmoCh18G013490Bottle gourd (USVL1VR-Ls)cmolsiB370
CmoCh18G013490Cucumber (Gy14) v2cgybcmoB326
CmoCh18G013490Cucumber (Gy14) v2cgybcmoB328
CmoCh18G013490Cucumber (Gy14) v2cgybcmoB607
CmoCh18G013490Melon (DHL92) v3.6.1cmomedB390
CmoCh18G013490Melon (DHL92) v3.6.1cmomedB422
CmoCh18G013490Melon (DHL92) v3.6.1cmomedB423
CmoCh18G013490Silver-seed gourdcarcmoB0693
CmoCh18G013490Silver-seed gourdcarcmoB1327
CmoCh18G013490Silver-seed gourdcarcmoB1328
CmoCh18G013490Cucumber (Chinese Long) v3cmocucB0478
CmoCh18G013490Cucumber (Chinese Long) v3cmocucB0480
CmoCh18G013490Cucumber (Chinese Long) v3cmocucB0490
CmoCh18G013490Watermelon (97103) v2cmowmbB385
CmoCh18G013490Watermelon (97103) v2cmowmbB404
CmoCh18G013490Watermelon (97103) v2cmowmbB409
CmoCh18G013490Wax gourdcmowgoB0499
CmoCh18G013490Wax gourdcmowgoB0504
CmoCh18G013490Wax gourdcmowgoB0507