CmoCh18G011260 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh18G011260
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat-containing family protein
LocationCmo_Chr18 : 11610277 .. 11612244 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAAAAGAGCTGTGTGTTCGATTCCTCGCAGGTTGTTTTCTTCTACACCAGAAGTCTCATCGCTCTACTCCTTCCTCCAACCCTCCCTCTTCGCCCCAAAGCGAGCACCATTTTCGCCATCTCAAGAATCCACCGACCTCCGTCAGAATCAAACTCCTCAAATTTTGACTACAGACCGTGTCGCCGCCGTAGAAACGACGCTCCACAAGTCCCTTCTCACCAGCGACACTGACGAGGCATGGAAATCCTTCAAACTGCTCACGAAAAGCTCCGTTTTCCCATGTAAGTCTCTCACTAATTCACTTATTGCCCACTTATCCTCAATCGGGGGCGTTCATAATCTGAAAAGAGCCTTTGCATCTGCGGTGTTTGTTATTGAAAAGAAACCCGAATTATTGGATTTTGGATCTGTCAAAACCCTATTAGCTTCTATGAAATGTGCCAACACTGCTGCCCCTGCTGTTTCTTTGATTAAATGCATGTTGAGGAATCGATGTTTTGTGCCTTTTGAATTCTGGGGCAATGAACTTGTTAGTATTTGCAGGCAGAGTGGTAGTTTGATTCCCTTTTTAAGAGTGTTTGAAGAGATTTGTAGGATTGTTTTAAACGAGAGGTTAGATTCTATGAAACCAGATCTCAATGCGTGTAATGCAGCACTTGAGGGCTGTTGCCATGAGCTTGAATCTGTAACGGATGCCGAGCACGTCGTTGAAACGATGTCGCTTTTGAATCTTCGGCCTGATGAAGTGACTTTTGGTGCTCTTGCTCATTTGTATGCATTGAAGGGGCTTGAACAGAAGATAATTGAGTTAAAACGTTTGATGGGAAGTTTTGGTTTTGCATCTAAGAGTCTGTTCTTTAATAATTTGGTAAGTGGATACGTTAATTCAGGCGACTTAGCTGCTGTTTCGAAGACTATGTTGGATGGTTTGAAAGATGAATGTGGAGAACATGTAAGATTTGAGGAAAAAACGTATTTGGAAGTGGTTAAGGCTTTTGTTCAGAGTGGAAATCTGAAGGAATTATCTTCATTGATTGTTGATGCTCAGAATTTAGAGTCTTTAACGGACGTCGATGGATCGATCGGATTCGGTATCATTAATGCTTGTGTTAATATTGGATGGTTAGATAATGTGCATGCCATTCTGAAAGAAATCAATTCCCAGGGAGTTTCTGTAGGCCTTGGAGTCTATATGCCGATCCTGAAGGCGTACCAGAAGGAGCGTCGAACAGCTGAAGCCACCCAATTAATCATGGATGTTAGCAGTTCCGGGCTACAGTTGGTTGCAGAAACTTTTGATGCTCTTATAGAAGCATCGATGTCGAATCAAGATTTTCAGTCGGCTTTCGCTTTGTTCAGGAAAATGAGGGAAACGAGAAAATCCAACACGAACGCTAGCTATCTAACTATTATGACTGGCTTAATGGAGAGCCATAGGCCTGAGTTGATGGCTGCCTTCTTAGACGAAGTTGTCGAGGATCCTCTCGTTGAAGTTGGAACTCATGATTGGAACTCTATTATACATGCCTTTTGCAAAGCTGGAAGGCTCGAGGATGCGAGAAGAACGTTTCGAAGAATGAAGTTTCTGCAGTTTGAACCGAACGAACAAACGTTCTTGTCTCTAATTAATGGCTATGTGTCGGGAGAGAGATATTTCTGTGTTTTGATGCTGTGGAACGAACTTAAGTGGAAGATTACTGCAAATGGGGAGAGAGGTTTCAAACTCGATAGCAACTTGGTTGACGCGTTCTTGTATGCTCTGGTCAAGGGAGGTTTCTTCGACGCCGTGATGCAAGTTGTCGAAAAAACTAAGGATTCGAAGACCTTCGTCGATAAGTGGAAATATAAGCAAGCATTCATGGAGACTCATAAGAAACTCAAAGTGGCAAAATTGAGGAGGAGGAACCACAGGAAAATGCAATCACTTATTGATTTCAAGAACTGGGTTGGTTTGAATGCTTGA

mRNA sequence

ATGTGGAAAAGAGCTGTGTGTTCGATTCCTCGCAGGTTGTTTTCTTCTACACCAGAAGTCTCATCGCTCTACTCCTTCCTCCAACCCTCCCTCTTCGCCCCAAAGCGAGCACCATTTTCGCCATCTCAAGAATCCACCGACCTCCGTCAGAATCAAACTCCTCAAATTTTGACTACAGACCGTGTCGCCGCCGTAGAAACGACGCTCCACAAGTCCCTTCTCACCAGCGACACTGACGAGGCATGGAAATCCTTCAAACTGCTCACGAAAAGCTCCGTTTTCCCATGTAAGTCTCTCACTAATTCACTTATTGCCCACTTATCCTCAATCGGGGGCGTTCATAATCTGAAAAGAGCCTTTGCATCTGCGGTGTTTGTTATTGAAAAGAAACCCGAATTATTGGATTTTGGATCTGTCAAAACCCTATTAGCTTCTATGAAATGTGCCAACACTGCTGCCCCTGCTGTTTCTTTGATTAAATGCATGTTGAGGAATCGATGTTTTGTGCCTTTTGAATTCTGGGGCAATGAACTTGTTAGTATTTGCAGGCAGAGTGGTAGTTTGATTCCCTTTTTAAGAGTGTTTGAAGAGATTTGTAGGATTGTTTTAAACGAGAGGTTAGATTCTATGAAACCAGATCTCAATGCGTGTAATGCAGCACTTGAGGGCTGTTGCCATGAGCTTGAATCTGTAACGGATGCCGAGCACGTCGTTGAAACGATGTCGCTTTTGAATCTTCGGCCTGATGAAGTGACTTTTGGTGCTCTTGCTCATTTGTATGCATTGAAGGGGCTTGAACAGAAGATAATTGAGTTAAAACGTTTGATGGGAAGTTTTGGTTTTGCATCTAAGAGTCTGTTCTTTAATAATTTGGTAAGTGGATACGTTAATTCAGGCGACTTAGCTGCTGTTTCGAAGACTATGTTGGATGGTTTGAAAGATGAATGTGGAGAACATGTAAGATTTGAGGAAAAAACGTATTTGGAAGTGGTTAAGGCTTTTGTTCAGAGTGGAAATCTGAAGGAATTATCTTCATTGATTGTTGATGCTCAGAATTTAGAGTCTTTAACGGACGTCGATGGATCGATCGGATTCGGTATCATTAATGCTTGTGTTAATATTGGATGGTTAGATAATGTGCATGCCATTCTGAAAGAAATCAATTCCCAGGGAGTTTCTGTAGGCCTTGGAGTCTATATGCCGATCCTGAAGGCGTACCAGAAGGAGCGTCGAACAGCTGAAGCCACCCAATTAATCATGGATGTTAGCAGTTCCGGGCTACAGTTGGTTGCAGAAACTTTTGATGCTCTTATAGAAGCATCGATGTCGAATCAAGATTTTCAGTCGGCTTTCGCTTTGTTCAGGAAAATGAGGGAAACGAGAAAATCCAACACGAACGCTAGCTATCTAACTATTATGACTGGCTTAATGGAGAGCCATAGGCCTGAGTTGATGGCTGCCTTCTTAGACGAAGTTGTCGAGGATCCTCTCGTTGAAGTTGGAACTCATGATTGGAACTCTATTATACATGCCTTTTGCAAAGCTGGAAGGCTCGAGGATGCGAGAAGAACGTTTCGAAGAATGAAGTTTCTGCAGTTTGAACCGAACGAACAAACGTTCTTGTCTCTAATTAATGGCTATGTGTCGGGAGAGAGATATTTCTGTGTTTTGATGCTGTGGAACGAACTTAAGTGGAAGATTACTGCAAATGGGGAGAGAGGTTTCAAACTCGATAGCAACTTGGTTGACGCGTTCTTGTATGCTCTGGTCAAGGGAGGTTTCTTCGACGCCGTGATGCAAGTTGTCGAAAAAACTAAGGATTCGAAGACCTTCGTCGATAAGTGGAAATATAAGCAAGCATTCATGGAGACTCATAAGAAACTCAAAGTGGCAAAATTGAGGAGGAGGAACCACAGGAAAATGCAATCACTTATTGATTTCAAGAACTGGGTTGGTTTGAATGCTTGA

Coding sequence (CDS)

ATGTGGAAAAGAGCTGTGTGTTCGATTCCTCGCAGGTTGTTTTCTTCTACACCAGAAGTCTCATCGCTCTACTCCTTCCTCCAACCCTCCCTCTTCGCCCCAAAGCGAGCACCATTTTCGCCATCTCAAGAATCCACCGACCTCCGTCAGAATCAAACTCCTCAAATTTTGACTACAGACCGTGTCGCCGCCGTAGAAACGACGCTCCACAAGTCCCTTCTCACCAGCGACACTGACGAGGCATGGAAATCCTTCAAACTGCTCACGAAAAGCTCCGTTTTCCCATGTAAGTCTCTCACTAATTCACTTATTGCCCACTTATCCTCAATCGGGGGCGTTCATAATCTGAAAAGAGCCTTTGCATCTGCGGTGTTTGTTATTGAAAAGAAACCCGAATTATTGGATTTTGGATCTGTCAAAACCCTATTAGCTTCTATGAAATGTGCCAACACTGCTGCCCCTGCTGTTTCTTTGATTAAATGCATGTTGAGGAATCGATGTTTTGTGCCTTTTGAATTCTGGGGCAATGAACTTGTTAGTATTTGCAGGCAGAGTGGTAGTTTGATTCCCTTTTTAAGAGTGTTTGAAGAGATTTGTAGGATTGTTTTAAACGAGAGGTTAGATTCTATGAAACCAGATCTCAATGCGTGTAATGCAGCACTTGAGGGCTGTTGCCATGAGCTTGAATCTGTAACGGATGCCGAGCACGTCGTTGAAACGATGTCGCTTTTGAATCTTCGGCCTGATGAAGTGACTTTTGGTGCTCTTGCTCATTTGTATGCATTGAAGGGGCTTGAACAGAAGATAATTGAGTTAAAACGTTTGATGGGAAGTTTTGGTTTTGCATCTAAGAGTCTGTTCTTTAATAATTTGGTAAGTGGATACGTTAATTCAGGCGACTTAGCTGCTGTTTCGAAGACTATGTTGGATGGTTTGAAAGATGAATGTGGAGAACATGTAAGATTTGAGGAAAAAACGTATTTGGAAGTGGTTAAGGCTTTTGTTCAGAGTGGAAATCTGAAGGAATTATCTTCATTGATTGTTGATGCTCAGAATTTAGAGTCTTTAACGGACGTCGATGGATCGATCGGATTCGGTATCATTAATGCTTGTGTTAATATTGGATGGTTAGATAATGTGCATGCCATTCTGAAAGAAATCAATTCCCAGGGAGTTTCTGTAGGCCTTGGAGTCTATATGCCGATCCTGAAGGCGTACCAGAAGGAGCGTCGAACAGCTGAAGCCACCCAATTAATCATGGATGTTAGCAGTTCCGGGCTACAGTTGGTTGCAGAAACTTTTGATGCTCTTATAGAAGCATCGATGTCGAATCAAGATTTTCAGTCGGCTTTCGCTTTGTTCAGGAAAATGAGGGAAACGAGAAAATCCAACACGAACGCTAGCTATCTAACTATTATGACTGGCTTAATGGAGAGCCATAGGCCTGAGTTGATGGCTGCCTTCTTAGACGAAGTTGTCGAGGATCCTCTCGTTGAAGTTGGAACTCATGATTGGAACTCTATTATACATGCCTTTTGCAAAGCTGGAAGGCTCGAGGATGCGAGAAGAACGTTTCGAAGAATGAAGTTTCTGCAGTTTGAACCGAACGAACAAACGTTCTTGTCTCTAATTAATGGCTATGTGTCGGGAGAGAGATATTTCTGTGTTTTGATGCTGTGGAACGAACTTAAGTGGAAGATTACTGCAAATGGGGAGAGAGGTTTCAAACTCGATAGCAACTTGGTTGACGCGTTCTTGTATGCTCTGGTCAAGGGAGGTTTCTTCGACGCCGTGATGCAAGTTGTCGAAAAAACTAAGGATTCGAAGACCTTCGTCGATAAGTGGAAATATAAGCAAGCATTCATGGAGACTCATAAGAAACTCAAAGTGGCAAAATTGAGGAGGAGGAACCACAGGAAAATGCAATCACTTATTGATTTCAAGAACTGGGTTGGTTTGAATGCTTGA
Homology
[Close]
BLAST of CmoCh18G011260 vs. Swiss-Prot
Match: PP110_ARATH (Pentatricopeptide repeat-containing protein At1g69290 OS=Arabidopsis thaliana GN=At1g69290 PE=2 SV=1)

HSP 1 Score: 780.0 bits (2013), Expect = 2.0e-224
Identity = 408/663 (61.54%), Postives = 517/663 (77.98%), Query Frame = 1 

Query: 1   MWKRAVCSIPRRLFSST-PEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTT 60
           M+++ + SI RR FSS+ PE  SLYSFL+PSLF+ K    SPS     L   Q P+ LT 
Sbjct: 1   MFRKTLNSISRRHFSSSSPESPSLYSFLKPSLFSHKPITLSPS-----LSPPQNPKTLTP 60

Query: 61  DRVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGV-----H 120
           D+ ++ E+TLH SL    TDEAWK+F+ LT +S  P K L NSLI HLS + G      H
Sbjct: 61  DQKSSFESTLHDSLNAHYTDEAWKAFRSLTAASSLPEKRLINSLITHLSGVEGSGESISH 120

Query: 121 NLKRAFASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFW 180
            LKRAFASA +VIEK P LL+F +V+TLL SMK A  A PA++L+KCM +NR FVPF+ W
Sbjct: 121 RLKRAFASAAYVIEKDPILLEFETVRTLLESMKLAKAAGPALALVKCMFKNRYFVPFDLW 180

Query: 181 GNELVSICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDA 240
           G+ ++ ICR++GSL PFL+VF+E CRI ++E+L+ MKPDL A NAALE CC ++ES+ DA
Sbjct: 181 GHLVIDICRENGSLAPFLKVFKESCRISVDEKLEFMKPDLVASNAALEACCRQMESLADA 240

Query: 241 EHVVETMSLLNLRPDEVTFGALAHLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSG 300
           E+V+E+M++L ++PDE++FG LA+LYA KGL +KI EL+ LM  FGFAS+ + ++N++SG
Sbjct: 241 ENVIESMAVLGVKPDELSFGFLAYLYARKGLREKISELENLMDGFGFASRRILYSNMISG 300

Query: 301 YVNSGDLAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLE 360
           YV SGDL +VS  +L  LK E GE   F  +TY E+VK F++S ++K L+ +I++AQ LE
Sbjct: 301 YVKSGDLDSVSDVILHSLK-EGGEESSFSVETYCELVKGFIESKSVKSLAKVILEAQKLE 360

Query: 361 S-LTDVDGSIGFGIINACVNIGWLDNVHAILKEINSQGV-SVGLGVYMPILKAYQKERRT 420
           S    VD S+GFGIINACVN+G+ D  H+IL+E+ +QG  SVG+GVY+PILKAY KE RT
Sbjct: 361 SSYVGVDSSVGFGIINACVNLGFSDKAHSILEEMIAQGGGSVGIGVYVPILKAYCKEYRT 420

Query: 421 AEATQLIMDVSSSGLQLVAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTI 480
           AEATQL+ ++SSSGLQL  E  +ALIEASM+NQDF SAF LFR MRE R  +   SYLTI
Sbjct: 421 AEATQLVTEISSSGLQLDVEISNALIEASMTNQDFISAFTLFRDMRENRVVDLKGSYLTI 480

Query: 481 MTGLMESHRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQ 540
           MTGL+E+ RPELMAAFLDEVVEDP VEV +HDWNSIIHAFCK+GRLEDARRTFRRM FL+
Sbjct: 481 MTGLLENQRPELMAAFLDEVVEDPRVEVNSHDWNSIIHAFCKSGRLEDARRTFRRMVFLR 540

Query: 541 FEPNEQTFLSLINGYVSGERYFCVLMLWNELKWKITA-NGERGFKLDSNLVDAFLYALVK 600
           +EPN QT+LSLINGYVSGE+YF VL+LWNE+K KI++   E+  +LD  LVDAFLYALVK
Sbjct: 541 YEPNNQTYLSLINGYVSGEKYFNVLLLWNEIKGKISSVEAEKRSRLDHALVDAFLYALVK 600

Query: 601 GGFFDAVMQVVEKTKDSKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWV 655
           GGFFDA MQVVEK+++ K FVDKW+YKQAFMETHKKL++ KLR+RN++KM+SL+ FKNW 
Sbjct: 601 GGFFDAAMQVVEKSQEMKIFVDKWRYKQAFMETHKKLRLPKLRKRNYKKMESLVAFKNWA 657

[Close]
BLAST of CmoCh18G011260 vs. Swiss-Prot
Match: PP109_ARATH (Pentatricopeptide repeat-containing protein At1g68980, mitochondrial OS=Arabidopsis thaliana GN=At1g68980 PE=2 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 6.3e-186
Identity = 338/623 (54.25%), Postives = 450/623 (72.23%), Query Frame = 1 

Query: 36  RAPFSPSQESTDLRQNQTPQILTTDRVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFP 95
           R PFS     T          LT  + ++ E+TLH SL+T DTD+AWK F+    +S  P
Sbjct: 12  RRPFSSIPSKT----------LTPHQKSSFESTLHHSLITHDTDQAWKVFRSFAAASSLP 71

Query: 96  CKSLTNSLIAHLSSIGGV-------HNLKRAFASAVFVIEKKPELLDFGSVKTLLASMKC 155
            K L NSLI HLSS           H LKRAF S  +VIEK P LL+F +V+T+L SMK 
Sbjct: 72  DKRLLNSLITHLSSFHNTDQNTSLRHRLKRAFVSTTYVIEKDPILLEFETVRTVLESMKL 131

Query: 156 ANTAAPAVSLIKCMLRNRCFVPFEFWGNELVSICRQSGSLIPFLRVFEEICRIVLNERLD 215
           A  + PA++L++CM +NR FVPF+ WG+ L+ +CR++GSL  FL+VF E CRI ++E+LD
Sbjct: 132 AKASGPALALVECMFKNRYFVPFDLWGDLLIDVCRENGSLAAFLKVFRESCRIAVDEKLD 191

Query: 216 SMKPDLNACNAALEGCCHELESVTDAEHVVETMSLLNLRPDEVTFGALAHLYALKGLEQK 275
            MKPDL A NAALE CC ++ES+ DAE+++E+M +L ++PDE++FG LA+LYA KGL +K
Sbjct: 192 FMKPDLVASNAALEACCRQMESLADAENLIESMDVLGVKPDELSFGFLAYLYARKGLREK 251

Query: 276 IIELKRLMGSFGFASKSLFFNNLVSGYVNSGDLAAVSKTMLDGLKDECGEHVRFEEKTYL 335
           I EL+ LM   GFAS+ + +++++SGYV SGDL + S  +L  LK   GE   F E+TY 
Sbjct: 252 ISELEDLMDGLGFASRRILYSSMISGYVKSGDLDSASDVILCSLKG-VGEASSFSEETYC 311

Query: 336 EVVKAFVQSGNLKELSSLIVDAQNLESL-TDVDGSIGFGIINACVNIGWLDNVHAILKEI 395
           E+V+ F++S +++ L+ LI++AQ LES+ TDV GS+GFGI+NACV +G+     +IL E+
Sbjct: 312 ELVRGFIESKSVESLAKLIIEAQKLESMSTDVGGSVGFGIVNACVKLGFSGK--SILDEL 371

Query: 396 NSQGVSVGLGVYMPILKAYQKERRTAEATQLIMDVSSSGLQLVAETFDALIEASMSNQDF 455
           N+QG S G+GVY+PILKAY KE RT+EATQL+ ++SSSGLQL  ET++ +IEASM+  DF
Sbjct: 372 NAQGGSGGIGVYVPILKAYCKEGRTSEATQLVTEISSSGLQLDVETYNTMIEASMTKHDF 431

Query: 456 QSAFALFRKMRETRKSNTNASYLTIMTGLMESHRPELMAAFLDEVVEDPLVEVGTHDWNS 515
            SA  LFR MRETR ++    YLTIMTGL+E+ RPELMA F++EV+EDP VEV +HDWNS
Sbjct: 432 LSALTLFRDMRETRVADLKRCYLTIMTGLLENQRPELMAEFVEEVMEDPRVEVKSHDWNS 491

Query: 516 IIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTFLSLINGYVSGERYFCVLMLWNELKWKI 575
           IIHAFCK+GRL DA+ TFRRM FLQ+EPN QT+LSLINGYVS E+YF V+++W E K   
Sbjct: 492 IIHAFCKSGRLGDAKSTFRRMTFLQYEPNNQTYLSLINGYVSCEKYFEVVVIWKEFK--- 551

Query: 576 TANGERGFKLDSNLVDAFLYALVKGGFFDAVMQVVEKTKDSKTFVDKWKYKQAFMETHKK 635
               ++  KL+  L DAFL ALVKGGFF   +QV+EK ++ K FVDKW+YK  FMET K 
Sbjct: 552 ----DKKAKLEHALADAFLNALVKGGFFGTALQVIEKCQEMKIFVDKWRYKATFMETQKN 611

Query: 636 LKVAKLRRRNHRKMQSLIDFKNW 651
           L++ KLR+R  +K++ L  FKNW
Sbjct: 612 LRLPKLRKRKMKKIEFLDAFKNW 614

[Close]
BLAST of CmoCh18G011260 vs. Swiss-Prot
Match: PPR6_ARATH (Pentatricopeptide repeat-containing protein At1g03100, mitochondrial OS=Arabidopsis thaliana GN=At1g03100 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.6e-56
Identity = 120/337 (35.61%), Postives = 193/337 (57.27%), Query Frame = 1 

Query: 324 EKTYLEVVKAFVQSGNLKELSSLIVDAQNLESLTDVDGSIGFGIINACVNIGWLDNVHAI 383
           E+ Y+++ KAF++SG +KEL+  ++ A++ +S    D S+   +INAC+++G LD  H +
Sbjct: 459 EEIYVKLAKAFLESGKMKELAKFLLKAEHEDSPVSSDNSMLINVINACISLGMLDQAHDL 518

Query: 384 LKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIMDVSSSGLQLVAETFDALIEASMS 443
           L E+   GV  G  VY  +LKAY    +T E T L+ D   +G+QL +  ++ALI++ + 
Sbjct: 519 LDEMRMAGVRTGSSVYSSLLKAYCNTNQTREVTSLLRDAQKAGIQLDSSCYEALIQSQVI 578

Query: 444 NQDFQSAFALFRKMRETR-KSNTNASYLTIMTGLMESHRPELMAAFLDEVVEDPLVEVGT 503
             D   A  +F++M+E +     N  +  ++ G   +    LM+  L E+ E   ++ G 
Sbjct: 579 QNDTHGALNVFKEMKEAKILRGGNQKFEKLLKGCEGNAEAGLMSKLLREIREVQSLDAGV 638

Query: 504 HDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTFLSLINGYVS-GERYFCVLMLWN 563
           HDWN++IH F K G ++DA +  +RM+ L   PN QTF S++ GY + G +Y  V  LW 
Sbjct: 639 HDWNNVIHFFSKKGLMQDAEKALKRMRSLGHSPNAQTFHSMVTGYAAIGSKYTEVTELWG 698

Query: 564 ELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVMQVVEKTKDSKTFVDKWKYKQAF 623
           E+  K  A      K D  L+DA LY  V+GGFF    +VVE  +    FVDK+KY+  F
Sbjct: 699 EM--KSIAAATSSMKFDQELLDAVLYTFVRGGFFSRANEVVEMMEKKNMFVDKYKYRMLF 758

Query: 624 METHK---KLKVAKLRRRNH-RKMQSLIDFKNWVGLN 655
           ++ HK   K K  K++  +  +K ++ + FK W+GL+
Sbjct: 759 LKYHKTAYKGKAPKVQSESQLKKREAGLVFKKWLGLS 793

[Close]
BLAST of CmoCh18G011260 vs. Swiss-Prot
Match: PP317_ARATH (Pentatricopeptide repeat-containing protein At4g17616 OS=Arabidopsis thaliana GN=At4g17616 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-20
Identity = 74/304 (24.34%), Postives = 139/304 (45.72%), Query Frame = 1 

Query: 325 KTYLEVVKAFVQSGNLKELSSLIVDAQNLESLTDVDGSIGFGIINACVNIGWLDNVHAIL 384
           KT  ++V  + +  NL ELS L+          DV        I+ACV IGWL+  H IL
Sbjct: 382 KTLAKLVYGYKRHDNLPELSKLLFSLGGSRLCADV--------IDACVAIGWLEAAHDIL 441

Query: 385 KEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIMDVSSSGLQLVAETFDALIEASMSN 444
            ++NS G  + L  Y  +L  Y K +    A  L+  ++ +GL +   + + ++      
Sbjct: 442 DDMNSAGYPMELATYRMVLSGYYKSKMLRNAEVLLKQMTKAGL-ITDPSNEIVVSPETEE 501

Query: 445 QDFQSAFALFRKMRETRKSNTNASYLTIMTGLMESHRPELMAAFLDEVVEDPLVEVGTHD 504
           +D ++      ++R+      NA          +   P ++                 ++
Sbjct: 502 KDSENT-----ELRDLLVQEINAG--------KQMKAPSML-----------------YE 561

Query: 505 WNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTFLSLINGYVSGERYFCVLMLWNELK 564
            NS ++ FCKA    DA  T+R++  ++  P  Q+F  LI+ Y S   Y  + ++W ++K
Sbjct: 562 LNSSLYYFCKAKMQGDALITYRKIPKMKIPPTVQSFWILIDMYSSLGMYREITIVWGDIK 621

Query: 565 WKITANGERGFKLDSNLVDAFLYALVKGGFFDAVMQVVEKTKDSKTFVDKWKYKQAFMET 624
             I +   +  K   +L++  +   ++GG+F+ VM+++   K++  + D   YK  +++ 
Sbjct: 622 RNIAS---KNLKTTQDLLEKLVVNFLRGGYFERVMELISYMKENDMYNDLTMYKNEYLKL 643

Query: 625 HKKL 629
           HK L
Sbjct: 682 HKNL 643

[Close]
BLAST of CmoCh18G011260 vs. Swiss-Prot
Match: PPR93_ARATH (Pentatricopeptide repeat-containing protein At1g62720 OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.9e-17
Identity = 97/419 (23.15%), Postives = 179/419 (42.72%), Query Frame = 1 

Query: 131 PELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELV--SICRQSGSL 190
           P ++DF  V + +A  K  +     +SL   M    C +  + +   +V   +CR S  +
Sbjct: 67  PSIVDFSKVLSKIAKSKNYDLV---ISLFHHM--EVCGIGHDLYSYNIVINCLCRCSRFV 126

Query: 191 IPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVETMSLLNLRP 250
           I  L V  ++ +          +PD+   ++ + G C     V DA  +V  M  +  RP
Sbjct: 127 IA-LSVVGKMMKF-------GYEPDVVTVSSLINGFCQG-NRVFDAIDLVSKMEEMGFRP 186

Query: 251 DEVTFGALAHLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSGDLAAVSKTM 310
           D V +  +       GL    +EL   M   G  + ++ +N+LV+G   SG  +  ++ M
Sbjct: 187 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 246

Query: 311 LDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESLTDVDGSIGFGII 370
            D +  +   +V     T+  V+  FV+ G   E   L  +        D D      +I
Sbjct: 247 RDMVMRDIVPNVI----TFTAVIDVFVKEGKFSEAMKLYEEMTR--RCVDPDVFTYNSLI 306

Query: 371 NACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIMDVSSSGLQ 430
           N     G +D    +L  + ++G    +  Y  ++  + K +R  E T+L  +++  GL 
Sbjct: 307 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 366

Query: 431 LVAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMESHRPELMAAF 490
               T++ +I+         +A  +F +M       T   Y  ++ GL  + R E  A  
Sbjct: 367 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRT---YSILLYGLCMNWRVE-KALV 426

Query: 491 LDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTFLSLINGY 548
           L E ++   +E+    +N +IH  CK G +EDA   FR +     +P+  ++ ++I+G+
Sbjct: 427 LFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461

[Close]
BLAST of CmoCh18G011260 vs. TrEMBL
Match: A0A0A0KSW9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606690 PE=4 SV=1)

HSP 1 Score: 1093.2 bits (2826), Expect = 0.0e+00
Identity = 552/656 (84.15%), Postives = 591/656 (90.09%), Query Frame = 1 

Query: 1   MWKRAVCSIPRRLFSSTPE-VSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTT 60
           MWKR +C IP R FSS PE   SLYSFLQPSLFA KR PFSPSQ+STDLRQ+ TPQ LT 
Sbjct: 1   MWKRVLCLIPHRSFSSVPENPPSLYSFLQPSLFARKRTPFSPSQDSTDLRQDPTPQNLTP 60

Query: 61  DRVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRA 120
           D VA VET LHKSLLTSDTDEAWKSFKLLT+SS FP KSLTNSLIAHLSSIG VHNLKRA
Sbjct: 61  DGVAVVETALHKSLLTSDTDEAWKSFKLLTRSSAFPSKSLTNSLIAHLSSIGDVHNLKRA 120

Query: 121 FASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELV 180
           FAS VFVIEKKPELLDFGSVK LLASMKCANTAAPA+SLIKCM +NRCFVPF  WG ELV
Sbjct: 121 FASVVFVIEKKPELLDFGSVKALLASMKCANTAAPALSLIKCMFKNRCFVPFSVWGKELV 180

Query: 181 SICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVE 240
            ICRQSGSLIPFLRVFEE CRI L+ERLD +KPDL ACNAALEGCCHELESVTDAE V+E
Sbjct: 181 DICRQSGSLIPFLRVFEENCRIALDERLDFLKPDLIACNAALEGCCHELESVTDAEKVIE 240

Query: 241 TMSLLNLRPDEVTFGALAHLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSG 300
           TMSLL LRPDEV+FGALA+LYALKGL+QKIIEL+ LMGSFGF  K LFF+NLVSGYVN+ 
Sbjct: 241 TMSLLYLRPDEVSFGALAYLYALKGLDQKIIELEVLMGSFGFTCKDLFFSNLVSGYVNAS 300

Query: 301 DLAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESLTDV 360
           + AAVSKTML  LKDECG HV F EKTYLE+VK F+QSGNLKELS+LI+DAQNLES + V
Sbjct: 301 NFAAVSKTMLRSLKDECGSHVHFGEKTYLEMVKGFIQSGNLKELSALIIDAQNLESSSAV 360

Query: 361 DGSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLI 420
           DGSIGFGIINACVNIGWLD    IL E+NSQGVS+GLGVY+PILKAY+KE RTA ATQLI
Sbjct: 361 DGSIGFGIINACVNIGWLDKAQYILDEMNSQGVSLGLGVYLPILKAYRKEHRTAAATQLI 420

Query: 421 MDVSSSGLQLVAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMES 480
           MD+SSSG+QL AE +DALIEASMSNQDFQSAF LFR MRETRKS+T ASYLTIMTGLME+
Sbjct: 421 MDISSSGIQLDAENYDALIEASMSNQDFQSAFTLFRSMRETRKSDTKASYLTIMTGLMEN 480

Query: 481 HRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQT 540
           HRPELMAAFLDE+VEDPLVEVGTHDWNSIIHAFCKAGRLEDARRT+RRMKFLQFEPNEQT
Sbjct: 481 HRPELMAAFLDEIVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTYRRMKFLQFEPNEQT 540

Query: 541 FLSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVM 600
           FLSLINGYVS ERYFCVLMLWNELKWK+T NGE G KLD+NLVDAFLYALVKGGFFDAVM
Sbjct: 541 FLSLINGYVSAERYFCVLMLWNELKWKVTPNGESGIKLDNNLVDAFLYALVKGGFFDAVM 600

Query: 601 QVVEKTKDSKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 656
           QVVEKTKD+K F+DKWKYKQAFMETHKKLKVAKLRRRN++KM+SLI FKNW GLNA
Sbjct: 601 QVVEKTKDTKIFIDKWKYKQAFMETHKKLKVAKLRRRNYKKMESLIAFKNWAGLNA 656

[Close]
BLAST of CmoCh18G011260 vs. TrEMBL
Match: M5XK61_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002589mg PE=4 SV=1)

HSP 1 Score: 875.5 bits (2261), Expect = 3.9e-251
Identity = 440/656 (67.07%), Postives = 539/656 (82.16%), Query Frame = 1 

Query: 1   MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTTD 60
           MW++A+  +P R FSSTPE+ +LYSFLQPS+FA KR    PSQ+S        P+ L  D
Sbjct: 1   MWRKALTLLPHRPFSSTPEIPTLYSFLQPSVFALKR-DLPPSQKSHSDLPTPPPKTLAPD 60

Query: 61  RVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRAF 120
            +  +E TLHKSL+T +TDEAWKSFK LT SS FP KSLTNSLI HLSS+G +HNLKRAF
Sbjct: 61  HITTLEATLHKSLITHNTDEAWKSFKTLTGSSAFPSKSLTNSLITHLSSLGDIHNLKRAF 120

Query: 121 ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELVS 180
           A+ V+V+EK P  LDF +V TLL +MKCANTAAPA +LIK + +NR F+PF  WGN L+ 
Sbjct: 121 ATVVYVVEKNPGFLDFETVGTLLDAMKCANTAAPAFALIKSVFKNRFFLPFSVWGNVLIE 180

Query: 181 ICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVET 240
           I R++G+ + FLRVFEE CRI L+E+L+SMKPDL ACNAALEGCC ELESV+DAE VVET
Sbjct: 181 ISRKNGNFVAFLRVFEENCRIALDEKLESMKPDLAACNAALEGCCRELESVSDAEKVVET 240

Query: 241 MSLLNLRPDEVTFGALAHLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSGD 300
           M++L +RPDE +FG LA+LYALKGLE+KI EL+ LMG FGF++K +F +NL++GYV SG 
Sbjct: 241 MAVLGVRPDESSFGFLAYLYALKGLEEKITELEGLMGGFGFSNKRVFQSNLINGYVKSGK 300

Query: 301 LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESLTDV- 360
           L +VS T+L  L++  G+ +   E+TY EVVK ++ S ++KEL++LI++AQ LES T V 
Sbjct: 301 LESVSATILRILREGDGDFLNLGEETYCEVVKGYLMSASVKELATLIIEAQKLESSTVVV 360

Query: 361 DGSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLI 420
           D S+G+GI+NACV+IG  D  H IL E+N+QG S+GLGVY+PILKAY KE RTAEATQL+
Sbjct: 361 DRSVGYGIVNACVHIGLSDKAHGILDEMNAQGGSLGLGVYVPILKAYCKEHRTAEATQLV 420

Query: 421 MDVSSSGLQLVAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMES 480
           MDVS+SGLQL   T+DALIE+SMS+QDFQSAF+L+R MRE R S+   SYLTIMTGLME+
Sbjct: 421 MDVSNSGLQLDTGTYDALIESSMSSQDFQSAFSLYRDMREARISDLKGSYLTIMTGLMEN 480

Query: 481 HRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQT 540
           HRPELMAAFLDEVVEDP +EVGTHDWNSIIHAFCKAGRLEDARRTFRRM FLQ +PNEQT
Sbjct: 481 HRPELMAAFLDEVVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMIFLQHKPNEQT 540

Query: 541 FLSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVM 600
           +LSLI+GYVS E+YFCVLMLW+E+K  ++ +GE+G K D N+VDAFLYALVKGGFFDAVM
Sbjct: 541 YLSLISGYVSVEKYFCVLMLWHEVKRNVSVDGEKGIKFDHNMVDAFLYALVKGGFFDAVM 600

Query: 601 QVVEKTKDSKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 656
           QVVEK+++ K FVDKW+YKQAFMETHKKLKV+KLR+RN RKM++L+ FKNW GLNA
Sbjct: 601 QVVEKSQEMKVFVDKWRYKQAFMETHKKLKVSKLRKRNFRKMEALVAFKNWAGLNA 655

[Close]
BLAST of CmoCh18G011260 vs. TrEMBL
Match: W9QNW1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000401 PE=4 SV=1)

HSP 1 Score: 839.3 bits (2167), Expect = 3.1e-240
Identity = 433/660 (65.61%), Postives = 524/660 (79.39%), Query Frame = 1 

Query: 1   MWKRAVCSIPRRLFSSTP--EVSSLYSFLQPSLFAPKRAPFSP--SQESTDLRQNQTPQI 60
           M ++A   +P R FSST   E+ +LYSFLQPS+FA +R    P  SQ +      + P+ 
Sbjct: 1   MLRKAFSFLPNRKFSSTSKNEIPTLYSFLQPSVFALRRESHPPPSSQHAAANLPTEPPKT 60

Query: 61  LTTDRVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNL 120
           LT D V ++ET L KSLLTSDTDEAWKSFK LT  S FP KSLTNSLIAHLSS+  VHNL
Sbjct: 61  LTLDDVNSLETNLQKSLLTSDTDEAWKSFKTLTSGSAFPSKSLTNSLIAHLSSLDDVHNL 120

Query: 121 KRAFASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGN 180
           KRAFAS V+V+EK PELL+F +++ LL S K ANTAAPA +L+KCM +NR FVPF  WGN
Sbjct: 121 KRAFASVVYVVEKNPELLEFETIEALLNSFKRANTAAPAFALVKCMFKNRYFVPFSVWGN 180

Query: 181 ELVSICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEH 240
            +V I R++GS   FLRVF E CRI  +E+LD MKPDL+ACNAALEGCC++L+SV+DAE 
Sbjct: 181 AIVEISRKNGSFAAFLRVFSENCRIATDEKLDFMKPDLDACNAALEGCCYQLQSVSDAEK 240

Query: 241 VVETMSLLNLRPDEVTFGALAHLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYV 300
           VV TMS+L +RPDE TFG L +LYA KGLE+KI E++RLM  F F S+  F +NL+SGYV
Sbjct: 241 VVGTMSVLGVRPDESTFGFLGYLYAFKGLEEKITEVERLMVWFCFKSRVGFRSNLISGYV 300

Query: 301 NSGDLAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESL 360
            SG+L +VS T+L GL++  GE+    E+TY EVVK F+Q+G +K L++LI++AQ LE  
Sbjct: 301 KSGNLDSVSATILRGLREGGGEYFELGEETYCEVVKGFLQNGGIKALATLIIEAQKLEPS 360

Query: 361 TD-VDGSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEA 420
            D VD S+G+GIINACVN+G  D  H+IL E+N+Q   +GLGVY+PILKAY KE RTAEA
Sbjct: 361 ADMVDRSVGYGIINACVNVGLSDKAHSILDEMNAQKGFLGLGVYLPILKAYCKEHRTAEA 420

Query: 421 TQLIMDVSSSGLQLVAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTG 480
           TQL+MD+ +SGL+L   T+D+LIEASMS+QDFQSA  LFR MRE R S+   SYLTIMTG
Sbjct: 421 TQLVMDIRNSGLELDVGTYDSLIEASMSSQDFQSALTLFRDMREARVSDLKGSYLTIMTG 480

Query: 481 LMESHRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEP 540
           LME++RPELMAAFLD+ VEDP V+VGTHDWNSIIHAFCKAGRLEDARRTFRRM FLQF+P
Sbjct: 481 LMENNRPELMAAFLDDAVEDPRVKVGTHDWNSIIHAFCKAGRLEDARRTFRRMIFLQFKP 540

Query: 541 NEQTFLSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFF 600
           NEQT+LSLI+GYVS E+YF VLMLWNE+K  ++ +GE+G K D NLVDAFLYALVKGGFF
Sbjct: 541 NEQTYLSLISGYVSAEKYFNVLMLWNEVKRNVSIDGEKGIKFDHNLVDAFLYALVKGGFF 600

Query: 601 DAVMQVVEKTKDSKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 656
           DAVMQVVEK+++ K FVDKW+YK AFMETHKKLKV+KLRRRN RKM++LI FKNW GL A
Sbjct: 601 DAVMQVVEKSQEMKIFVDKWRYKHAFMETHKKLKVSKLRRRNFRKMEALIAFKNWAGLTA 660

[Close]
BLAST of CmoCh18G011260 vs. TrEMBL
Match: A0A061EBF1_THECC (Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_011534 PE=4 SV=1)

HSP 1 Score: 837.4 bits (2162), Expect = 1.2e-239
Identity = 430/658 (65.35%), Postives = 528/658 (80.24%), Query Frame = 1 

Query: 1   MWKRAVCSIPRRLFSS--TPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILT 60
           MW +++ S+  R FSS  T E+ +LYSFLQP++FA K  P    +++ D   +QT + LT
Sbjct: 1   MWSKSLYSLTHRPFSSSSTTEIPTLYSFLQPTVFALK--PNQQPKQAQDSTNSQT-KTLT 60

Query: 61  TDRVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKR 120
            D+   +ETTL KSLL  +TDEAWKSFK LT +S+FP K LTNSLI +LSS+   HNLKR
Sbjct: 61  QDQKTTLETTLEKSLLAQNTDEAWKSFKALTTNSIFPNKPLTNSLITYLSSLKDTHNLKR 120

Query: 121 AFASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNEL 180
           AFAS VFVIEK P+ L F +V ++L SMK ANTAAPA +LIKCML+NR F+PF  WG+ L
Sbjct: 121 AFASVVFVIEKNPKSLSFETVTSVLRSMKIANTAAPAFALIKCMLKNRYFMPFVLWGDML 180

Query: 181 VSICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVV 240
           V I R++GS + FLRVFEE CRI ++E+LD MKPDL ACNAALE CC+EL+SV+DAE VV
Sbjct: 181 VDISRKNGSFVAFLRVFEECCRIAIDEKLDYMKPDLAACNAALECCCYELKSVSDAEKVV 240

Query: 241 ETMSLLNLRPDEVTFGALAHLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNS 300
           ETMS+L +RPDE +FG L++LYALKGLE+KI ELK LM  FG ++K + +++L+ GY  S
Sbjct: 241 ETMSVLGVRPDESSFGFLSYLYALKGLEEKIDELKNLMLEFGLSNKKMVYSSLIGGYAKS 300

Query: 301 GDLAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLES-LT 360
           G +  VS T+L  L++  G  + F ++TY EVVK ++Q+G +K L+ LI++AQ L+S + 
Sbjct: 301 GKIDLVSATILRSLREGNGNDLDFSDETYCEVVKGYLQNGVIKSLACLIIEAQKLQSSVV 360

Query: 361 DVDGSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQ 420
           +VD SIG+GII+AC+N+G  D  H+IL E+N+QG SVGLGVY+PILKAY KE RTAEATQ
Sbjct: 361 EVDKSIGYGIISACINLGLSDKAHSILDEMNAQGGSVGLGVYVPILKAYCKEHRTAEATQ 420

Query: 421 LIMDVSSSGLQLVAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLM 480
           L+MD+SS  LQL AE +DALIEASM++QDFQSAF LFR MRE R  +   SYLTIMTGLM
Sbjct: 421 LVMDISSLALQLDAEMYDALIEASMTSQDFQSAFTLFRDMREARIPDLKGSYLTIMTGLM 480

Query: 481 ESHRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNE 540
           E+ RPELMAAFLDEVVEDP VEV THDWNSIIHAFCKAGRLEDARRTFRRM FLQFEPN+
Sbjct: 481 ENQRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDARRTFRRMTFLQFEPND 540

Query: 541 QTFLSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDA 600
           QT+LSLINGYV+ E+YF VLMLWNE+KWKI+ +GE+G K D NLVDAFLYALVKGGFFDA
Sbjct: 541 QTYLSLINGYVTAEKYFSVLMLWNEVKWKISGDGEKGIKFDHNLVDAFLYALVKGGFFDA 600

Query: 601 VMQVVEKTKDSKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 656
           VMQVVEK+++ K FVDKW+YKQAFME HKKLKV+KLRRR+ RKM++LI FKNW GLNA
Sbjct: 601 VMQVVEKSQEMKIFVDKWRYKQAFMEKHKKLKVSKLRRRSFRKMEALIAFKNWAGLNA 655

[Close]
BLAST of CmoCh18G011260 vs. TrEMBL
Match: A0A067G4K7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g038801mg PE=4 SV=1)

HSP 1 Score: 831.2 bits (2146), Expect = 8.5e-238
Identity = 427/663 (64.40%), Postives = 530/663 (79.94%), Query Frame = 1 

Query: 1   MWKRAVCS---IPRRLF----SSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQT 60
           MW R   S   I ++ F    S++PE  SLYSFLQPS+F+ KR        ++  +Q Q 
Sbjct: 1   MWWRKEASFMLIRKKFFCSSSSTSPETPSLYSFLQPSIFSLKRKSLQQDPPNSPTQQQQQ 60

Query: 61  PQILTTDRVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGV 120
            Q LT D + ++ET LHKSLLT++TDEAWKSFK LT +S+FP K +TNSLIAHLSS+   
Sbjct: 61  -QTLTQDNITSLETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDN 120

Query: 121 HNLKRAFASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEF 180
           HNLKRAFAS V+VIEK P+LLDF +V TLL SM+ ANTAAPA +L+KCM +NR F+PFE 
Sbjct: 121 HNLKRAFASVVYVIEKNPKLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFEL 180

Query: 181 WGNELVSICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTD 240
           WG  LV ICR++ + + FL+VFEE CRI L+E LD MKP++ ACNAALEGCC+ L+SV+D
Sbjct: 181 WGGFLVDICRKNSNFVAFLKVFEECCRIALDENLDFMKPNIYACNAALEGCCYGLQSVSD 240

Query: 241 AEHVVETMSLLNLRPDEVTFGALAHLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVS 300
           AE V+ETMS+L +RP+E +FG LA+LYALKGL++KI+EL+ LM  FGF+S+ +F+++L+S
Sbjct: 241 AEKVIETMSVLGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLIS 300

Query: 301 GYVNSGDLAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNL 360
           GYV  G+L + S+T+L  L     E   F ++TY EVVK F+Q+GN+K L++LI++AQ L
Sbjct: 301 GYVKLGNLESASRTILLCLGGGNMEQSDFSKETYCEVVKGFLQNGNVKGLANLIIEAQKL 360

Query: 361 E-SLTDVDGSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRT 420
           E S   VD S+GFGII+ACVN+G  D  H+IL E+N+ G SVGLGVY+P LKAY KE RT
Sbjct: 361 EPSGIVVDRSVGFGIISACVNLGLSDKAHSILDEMNACGCSVGLGVYVPTLKAYCKEHRT 420

Query: 421 AEATQLIMDVSSSGLQLVAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTI 480
           AEATQL+MD+SSSGLQL    +DALIEAS+++QDFQSAF+LFR MRE R  +   SYLTI
Sbjct: 421 AEATQLVMDISSSGLQLDVGNYDALIEASITSQDFQSAFSLFRDMREARIYDLKGSYLTI 480

Query: 481 MTGLMESHRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQ 540
           MTGLME+HRPELMAAFLDEVVEDP VEV THDWNSIIHAFCKAGRLEDA+RT RRM FLQ
Sbjct: 481 MTGLMENHRPELMAAFLDEVVEDPRVEVKTHDWNSIIHAFCKAGRLEDAKRTLRRMIFLQ 540

Query: 541 FEPNEQTFLSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKG 600
           FEPN+QT+LSLINGYV+ E+YF VLM+W+E+K KI+ +G++G K + NLVDAFLYALVKG
Sbjct: 541 FEPNDQTYLSLINGYVTAEQYFSVLMMWHEIKRKISTDGQKGIKFEHNLVDAFLYALVKG 600

Query: 601 GFFDAVMQVVEKTKDSKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVG 656
           GFFDAVMQVVEK+++ K FVDKWKYKQAFME HKKLKVAKLR+RN +KM++LI FKNW G
Sbjct: 601 GFFDAVMQVVEKSQEMKVFVDKWKYKQAFMENHKKLKVAKLRKRNFKKMEALIAFKNWAG 660

[Close]
BLAST of CmoCh18G011260 vs. TAIR10
Match: AT1G69290.1 (AT1G69290.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 780.0 bits (2013), Expect = 1.1e-225
Identity = 408/663 (61.54%), Postives = 517/663 (77.98%), Query Frame = 1 

Query: 1   MWKRAVCSIPRRLFSST-PEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTT 60
           M+++ + SI RR FSS+ PE  SLYSFL+PSLF+ K    SPS     L   Q P+ LT 
Sbjct: 1   MFRKTLNSISRRHFSSSSPESPSLYSFLKPSLFSHKPITLSPS-----LSPPQNPKTLTP 60

Query: 61  DRVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGV-----H 120
           D+ ++ E+TLH SL    TDEAWK+F+ LT +S  P K L NSLI HLS + G      H
Sbjct: 61  DQKSSFESTLHDSLNAHYTDEAWKAFRSLTAASSLPEKRLINSLITHLSGVEGSGESISH 120

Query: 121 NLKRAFASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFW 180
            LKRAFASA +VIEK P LL+F +V+TLL SMK A  A PA++L+KCM +NR FVPF+ W
Sbjct: 121 RLKRAFASAAYVIEKDPILLEFETVRTLLESMKLAKAAGPALALVKCMFKNRYFVPFDLW 180

Query: 181 GNELVSICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDA 240
           G+ ++ ICR++GSL PFL+VF+E CRI ++E+L+ MKPDL A NAALE CC ++ES+ DA
Sbjct: 181 GHLVIDICRENGSLAPFLKVFKESCRISVDEKLEFMKPDLVASNAALEACCRQMESLADA 240

Query: 241 EHVVETMSLLNLRPDEVTFGALAHLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSG 300
           E+V+E+M++L ++PDE++FG LA+LYA KGL +KI EL+ LM  FGFAS+ + ++N++SG
Sbjct: 241 ENVIESMAVLGVKPDELSFGFLAYLYARKGLREKISELENLMDGFGFASRRILYSNMISG 300

Query: 301 YVNSGDLAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLE 360
           YV SGDL +VS  +L  LK E GE   F  +TY E+VK F++S ++K L+ +I++AQ LE
Sbjct: 301 YVKSGDLDSVSDVILHSLK-EGGEESSFSVETYCELVKGFIESKSVKSLAKVILEAQKLE 360

Query: 361 S-LTDVDGSIGFGIINACVNIGWLDNVHAILKEINSQGV-SVGLGVYMPILKAYQKERRT 420
           S    VD S+GFGIINACVN+G+ D  H+IL+E+ +QG  SVG+GVY+PILKAY KE RT
Sbjct: 361 SSYVGVDSSVGFGIINACVNLGFSDKAHSILEEMIAQGGGSVGIGVYVPILKAYCKEYRT 420

Query: 421 AEATQLIMDVSSSGLQLVAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTI 480
           AEATQL+ ++SSSGLQL  E  +ALIEASM+NQDF SAF LFR MRE R  +   SYLTI
Sbjct: 421 AEATQLVTEISSSGLQLDVEISNALIEASMTNQDFISAFTLFRDMRENRVVDLKGSYLTI 480

Query: 481 MTGLMESHRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQ 540
           MTGL+E+ RPELMAAFLDEVVEDP VEV +HDWNSIIHAFCK+GRLEDARRTFRRM FL+
Sbjct: 481 MTGLLENQRPELMAAFLDEVVEDPRVEVNSHDWNSIIHAFCKSGRLEDARRTFRRMVFLR 540

Query: 541 FEPNEQTFLSLINGYVSGERYFCVLMLWNELKWKITA-NGERGFKLDSNLVDAFLYALVK 600
           +EPN QT+LSLINGYVSGE+YF VL+LWNE+K KI++   E+  +LD  LVDAFLYALVK
Sbjct: 541 YEPNNQTYLSLINGYVSGEKYFNVLLLWNEIKGKISSVEAEKRSRLDHALVDAFLYALVK 600

Query: 601 GGFFDAVMQVVEKTKDSKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWV 655
           GGFFDA MQVVEK+++ K FVDKW+YKQAFMETHKKL++ KLR+RN++KM+SL+ FKNW 
Sbjct: 601 GGFFDAAMQVVEKSQEMKIFVDKWRYKQAFMETHKKLRLPKLRKRNYKKMESLVAFKNWA 657

[Close]
BLAST of CmoCh18G011260 vs. TAIR10
Match: AT1G68980.1 (AT1G68980.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 652.1 bits (1681), Expect = 3.6e-187
Identity = 338/623 (54.25%), Postives = 450/623 (72.23%), Query Frame = 1 

Query: 36  RAPFSPSQESTDLRQNQTPQILTTDRVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFP 95
           R PFS     T          LT  + ++ E+TLH SL+T DTD+AWK F+    +S  P
Sbjct: 12  RRPFSSIPSKT----------LTPHQKSSFESTLHHSLITHDTDQAWKVFRSFAAASSLP 71

Query: 96  CKSLTNSLIAHLSSIGGV-------HNLKRAFASAVFVIEKKPELLDFGSVKTLLASMKC 155
            K L NSLI HLSS           H LKRAF S  +VIEK P LL+F +V+T+L SMK 
Sbjct: 72  DKRLLNSLITHLSSFHNTDQNTSLRHRLKRAFVSTTYVIEKDPILLEFETVRTVLESMKL 131

Query: 156 ANTAAPAVSLIKCMLRNRCFVPFEFWGNELVSICRQSGSLIPFLRVFEEICRIVLNERLD 215
           A  + PA++L++CM +NR FVPF+ WG+ L+ +CR++GSL  FL+VF E CRI ++E+LD
Sbjct: 132 AKASGPALALVECMFKNRYFVPFDLWGDLLIDVCRENGSLAAFLKVFRESCRIAVDEKLD 191

Query: 216 SMKPDLNACNAALEGCCHELESVTDAEHVVETMSLLNLRPDEVTFGALAHLYALKGLEQK 275
            MKPDL A NAALE CC ++ES+ DAE+++E+M +L ++PDE++FG LA+LYA KGL +K
Sbjct: 192 FMKPDLVASNAALEACCRQMESLADAENLIESMDVLGVKPDELSFGFLAYLYARKGLREK 251

Query: 276 IIELKRLMGSFGFASKSLFFNNLVSGYVNSGDLAAVSKTMLDGLKDECGEHVRFEEKTYL 335
           I EL+ LM   GFAS+ + +++++SGYV SGDL + S  +L  LK   GE   F E+TY 
Sbjct: 252 ISELEDLMDGLGFASRRILYSSMISGYVKSGDLDSASDVILCSLKG-VGEASSFSEETYC 311

Query: 336 EVVKAFVQSGNLKELSSLIVDAQNLESL-TDVDGSIGFGIINACVNIGWLDNVHAILKEI 395
           E+V+ F++S +++ L+ LI++AQ LES+ TDV GS+GFGI+NACV +G+     +IL E+
Sbjct: 312 ELVRGFIESKSVESLAKLIIEAQKLESMSTDVGGSVGFGIVNACVKLGFSGK--SILDEL 371

Query: 396 NSQGVSVGLGVYMPILKAYQKERRTAEATQLIMDVSSSGLQLVAETFDALIEASMSNQDF 455
           N+QG S G+GVY+PILKAY KE RT+EATQL+ ++SSSGLQL  ET++ +IEASM+  DF
Sbjct: 372 NAQGGSGGIGVYVPILKAYCKEGRTSEATQLVTEISSSGLQLDVETYNTMIEASMTKHDF 431

Query: 456 QSAFALFRKMRETRKSNTNASYLTIMTGLMESHRPELMAAFLDEVVEDPLVEVGTHDWNS 515
            SA  LFR MRETR ++    YLTIMTGL+E+ RPELMA F++EV+EDP VEV +HDWNS
Sbjct: 432 LSALTLFRDMRETRVADLKRCYLTIMTGLLENQRPELMAEFVEEVMEDPRVEVKSHDWNS 491

Query: 516 IIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTFLSLINGYVSGERYFCVLMLWNELKWKI 575
           IIHAFCK+GRL DA+ TFRRM FLQ+EPN QT+LSLINGYVS E+YF V+++W E K   
Sbjct: 492 IIHAFCKSGRLGDAKSTFRRMTFLQYEPNNQTYLSLINGYVSCEKYFEVVVIWKEFK--- 551

Query: 576 TANGERGFKLDSNLVDAFLYALVKGGFFDAVMQVVEKTKDSKTFVDKWKYKQAFMETHKK 635
               ++  KL+  L DAFL ALVKGGFF   +QV+EK ++ K FVDKW+YK  FMET K 
Sbjct: 552 ----DKKAKLEHALADAFLNALVKGGFFGTALQVIEKCQEMKIFVDKWRYKATFMETQKN 611

Query: 636 LKVAKLRRRNHRKMQSLIDFKNW 651
           L++ KLR+R  +K++ L  FKNW
Sbjct: 612 LRLPKLRKRKMKKIEFLDAFKNW 614

[Close]
BLAST of CmoCh18G011260 vs. TAIR10
Match: AT1G03100.1 (AT1G03100.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 222.2 bits (565), Expect = 9.1e-58
Identity = 120/337 (35.61%), Postives = 193/337 (57.27%), Query Frame = 1 

Query: 324 EKTYLEVVKAFVQSGNLKELSSLIVDAQNLESLTDVDGSIGFGIINACVNIGWLDNVHAI 383
           E+ Y+++ KAF++SG +KEL+  ++ A++ +S    D S+   +INAC+++G LD  H +
Sbjct: 459 EEIYVKLAKAFLESGKMKELAKFLLKAEHEDSPVSSDNSMLINVINACISLGMLDQAHDL 518

Query: 384 LKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIMDVSSSGLQLVAETFDALIEASMS 443
           L E+   GV  G  VY  +LKAY    +T E T L+ D   +G+QL +  ++ALI++ + 
Sbjct: 519 LDEMRMAGVRTGSSVYSSLLKAYCNTNQTREVTSLLRDAQKAGIQLDSSCYEALIQSQVI 578

Query: 444 NQDFQSAFALFRKMRETR-KSNTNASYLTIMTGLMESHRPELMAAFLDEVVEDPLVEVGT 503
             D   A  +F++M+E +     N  +  ++ G   +    LM+  L E+ E   ++ G 
Sbjct: 579 QNDTHGALNVFKEMKEAKILRGGNQKFEKLLKGCEGNAEAGLMSKLLREIREVQSLDAGV 638

Query: 504 HDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTFLSLINGYVS-GERYFCVLMLWN 563
           HDWN++IH F K G ++DA +  +RM+ L   PN QTF S++ GY + G +Y  V  LW 
Sbjct: 639 HDWNNVIHFFSKKGLMQDAEKALKRMRSLGHSPNAQTFHSMVTGYAAIGSKYTEVTELWG 698

Query: 564 ELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVMQVVEKTKDSKTFVDKWKYKQAF 623
           E+  K  A      K D  L+DA LY  V+GGFF    +VVE  +    FVDK+KY+  F
Sbjct: 699 EM--KSIAAATSSMKFDQELLDAVLYTFVRGGFFSRANEVVEMMEKKNMFVDKYKYRMLF 758

Query: 624 METHK---KLKVAKLRRRNH-RKMQSLIDFKNWVGLN 655
           ++ HK   K K  K++  +  +K ++ + FK W+GL+
Sbjct: 759 LKYHKTAYKGKAPKVQSESQLKKREAGLVFKKWLGLS 793

[Close]
BLAST of CmoCh18G011260 vs. TAIR10
Match: AT4G17616.1 (AT4G17616.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 103.2 bits (256), Expect = 6.2e-22
Identity = 74/304 (24.34%), Postives = 139/304 (45.72%), Query Frame = 1 

Query: 325 KTYLEVVKAFVQSGNLKELSSLIVDAQNLESLTDVDGSIGFGIINACVNIGWLDNVHAIL 384
           KT  ++V  + +  NL ELS L+          DV        I+ACV IGWL+  H IL
Sbjct: 382 KTLAKLVYGYKRHDNLPELSKLLFSLGGSRLCADV--------IDACVAIGWLEAAHDIL 441

Query: 385 KEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIMDVSSSGLQLVAETFDALIEASMSN 444
            ++NS G  + L  Y  +L  Y K +    A  L+  ++ +GL +   + + ++      
Sbjct: 442 DDMNSAGYPMELATYRMVLSGYYKSKMLRNAEVLLKQMTKAGL-ITDPSNEIVVSPETEE 501

Query: 445 QDFQSAFALFRKMRETRKSNTNASYLTIMTGLMESHRPELMAAFLDEVVEDPLVEVGTHD 504
           +D ++      ++R+      NA          +   P ++                 ++
Sbjct: 502 KDSENT-----ELRDLLVQEINAG--------KQMKAPSML-----------------YE 561

Query: 505 WNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTFLSLINGYVSGERYFCVLMLWNELK 564
            NS ++ FCKA    DA  T+R++  ++  P  Q+F  LI+ Y S   Y  + ++W ++K
Sbjct: 562 LNSSLYYFCKAKMQGDALITYRKIPKMKIPPTVQSFWILIDMYSSLGMYREITIVWGDIK 621

Query: 565 WKITANGERGFKLDSNLVDAFLYALVKGGFFDAVMQVVEKTKDSKTFVDKWKYKQAFMET 624
             I +   +  K   +L++  +   ++GG+F+ VM+++   K++  + D   YK  +++ 
Sbjct: 622 RNIAS---KNLKTTQDLLEKLVVNFLRGGYFERVMELISYMKENDMYNDLTMYKNEYLKL 643

Query: 625 HKKL 629
           HK L
Sbjct: 682 HKNL 643

[Close]
BLAST of CmoCh18G011260 vs. TAIR10
Match: AT1G62720.1 (AT1G62720.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 92.4 bits (228), Expect = 1.1e-18
Identity = 97/419 (23.15%), Postives = 179/419 (42.72%), Query Frame = 1 

Query: 131 PELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELV--SICRQSGSL 190
           P ++DF  V + +A  K  +     +SL   M    C +  + +   +V   +CR S  +
Sbjct: 67  PSIVDFSKVLSKIAKSKNYDLV---ISLFHHM--EVCGIGHDLYSYNIVINCLCRCSRFV 126

Query: 191 IPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVETMSLLNLRP 250
           I  L V  ++ +          +PD+   ++ + G C     V DA  +V  M  +  RP
Sbjct: 127 IA-LSVVGKMMKF-------GYEPDVVTVSSLINGFCQG-NRVFDAIDLVSKMEEMGFRP 186

Query: 251 DEVTFGALAHLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSGDLAAVSKTM 310
           D V +  +       GL    +EL   M   G  + ++ +N+LV+G   SG  +  ++ M
Sbjct: 187 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 246

Query: 311 LDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESLTDVDGSIGFGII 370
            D +  +   +V     T+  V+  FV+ G   E   L  +        D D      +I
Sbjct: 247 RDMVMRDIVPNVI----TFTAVIDVFVKEGKFSEAMKLYEEMTR--RCVDPDVFTYNSLI 306

Query: 371 NACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIMDVSSSGLQ 430
           N     G +D    +L  + ++G    +  Y  ++  + K +R  E T+L  +++  GL 
Sbjct: 307 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 366

Query: 431 LVAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMESHRPELMAAF 490
               T++ +I+         +A  +F +M       T   Y  ++ GL  + R E  A  
Sbjct: 367 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRT---YSILLYGLCMNWRVE-KALV 426

Query: 491 LDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTFLSLINGY 548
           L E ++   +E+    +N +IH  CK G +EDA   FR +     +P+  ++ ++I+G+
Sbjct: 427 LFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461

[Close]
BLAST of CmoCh18G011260 vs. NCBI nr
Match: gi|659091218|ref|XP_008446433.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g69290 [Cucumis melo])

HSP 1 Score: 1100.1 bits (2844), Expect = 0.0e+00
Identity = 550/655 (83.97%), Postives = 593/655 (90.53%), Query Frame = 1 

Query: 1   MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTTD 60
           MWKR +C IP R FSS PE  SLYSFLQPSLFA KR PFSPSQ+STDLRQ+ TPQ LT D
Sbjct: 1   MWKRVLCLIPHRSFSSVPETPSLYSFLQPSLFAKKRTPFSPSQDSTDLRQDPTPQTLTPD 60

Query: 61  RVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRAF 120
           RVAAVET LHKSLLTSDTDEAWKSFKLLT+SS+FP KSLTNSLIAHLSSIG VHNLKRAF
Sbjct: 61  RVAAVETALHKSLLTSDTDEAWKSFKLLTRSSIFPSKSLTNSLIAHLSSIGDVHNLKRAF 120

Query: 121 ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELVS 180
           AS VFVIEKKPELLDFGSVK LLASMKCANTAAPA+SLIKCM +NRCFVPF  WG ELV 
Sbjct: 121 ASVVFVIEKKPELLDFGSVKALLASMKCANTAAPALSLIKCMFKNRCFVPFSVWGKELVD 180

Query: 181 ICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVET 240
           ICRQSGSLIPFLRVFEE CRI L+ERLD +KPDL ACNAALEGCCHELESVTDAE VVET
Sbjct: 181 ICRQSGSLIPFLRVFEENCRIALDERLDFLKPDLIACNAALEGCCHELESVTDAEKVVET 240

Query: 241 MSLLNLRPDEVTFGALAHLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSGD 300
           MSLL LRPDEV+FGALA+LYALKGLEQKIIEL+ LMGSFGF  K L F+NLVSGYVN+ +
Sbjct: 241 MSLLYLRPDEVSFGALAYLYALKGLEQKIIELEVLMGSFGFTRKDLLFSNLVSGYVNASN 300

Query: 301 LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESLTDVD 360
            AAVSKTML  LKDECG HV F EKTYLE+VK F+QSGNLKELS+LI+DAQNLES + VD
Sbjct: 301 FAAVSKTMLRSLKDECGSHVHFGEKTYLEMVKGFIQSGNLKELSALIIDAQNLESSSAVD 360

Query: 361 GSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIM 420
           GSIG+GIINACVNIGWLD    +L EINSQGVS+GLGVYMPILKAY+ ERRT EATQL+M
Sbjct: 361 GSIGYGIINACVNIGWLDKAQYVLNEINSQGVSLGLGVYMPILKAYRTERRTTEATQLVM 420

Query: 421 DVSSSGLQLVAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMESH 480
           D+++SG+QL AE++D+LIEASMSNQDFQSAF LFR MRETRKS+T ASYLTIMTGLME+H
Sbjct: 421 DITNSGIQLDAESYDSLIEASMSNQDFQSAFTLFRNMRETRKSDTKASYLTIMTGLMENH 480

Query: 481 RPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTF 540
           RPELMAAFLDE+VEDPLVEVGTHDWNSIIHAFCKAGRLEDARRT+RRMKFLQFEPNEQTF
Sbjct: 481 RPELMAAFLDEIVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTYRRMKFLQFEPNEQTF 540

Query: 541 LSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVMQ 600
           LSLINGYVS ERYFCVLMLWNELKWK+T +GE G KLD+NLVDAFLYALVKGGFFDAVMQ
Sbjct: 541 LSLINGYVSAERYFCVLMLWNELKWKVTPDGESGIKLDNNLVDAFLYALVKGGFFDAVMQ 600

Query: 601 VVEKTKDSKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 656
           VVEKTKD+K F+DKWKYKQAFME HKKLKVAKLRRRNHRKM+SLI FKNW GL+A
Sbjct: 601 VVEKTKDTKIFIDKWKYKQAFMENHKKLKVAKLRRRNHRKMESLIAFKNWAGLSA 655

[Close]
BLAST of CmoCh18G011260 vs. NCBI nr
Match: gi|449434724|ref|XP_004135146.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g69290 [Cucumis sativus])

HSP 1 Score: 1093.2 bits (2826), Expect = 0.0e+00
Identity = 552/656 (84.15%), Postives = 591/656 (90.09%), Query Frame = 1 

Query: 1   MWKRAVCSIPRRLFSSTPE-VSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTT 60
           MWKR +C IP R FSS PE   SLYSFLQPSLFA KR PFSPSQ+STDLRQ+ TPQ LT 
Sbjct: 1   MWKRVLCLIPHRSFSSVPENPPSLYSFLQPSLFARKRTPFSPSQDSTDLRQDPTPQNLTP 60

Query: 61  DRVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRA 120
           D VA VET LHKSLLTSDTDEAWKSFKLLT+SS FP KSLTNSLIAHLSSIG VHNLKRA
Sbjct: 61  DGVAVVETALHKSLLTSDTDEAWKSFKLLTRSSAFPSKSLTNSLIAHLSSIGDVHNLKRA 120

Query: 121 FASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELV 180
           FAS VFVIEKKPELLDFGSVK LLASMKCANTAAPA+SLIKCM +NRCFVPF  WG ELV
Sbjct: 121 FASVVFVIEKKPELLDFGSVKALLASMKCANTAAPALSLIKCMFKNRCFVPFSVWGKELV 180

Query: 181 SICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVE 240
            ICRQSGSLIPFLRVFEE CRI L+ERLD +KPDL ACNAALEGCCHELESVTDAE V+E
Sbjct: 181 DICRQSGSLIPFLRVFEENCRIALDERLDFLKPDLIACNAALEGCCHELESVTDAEKVIE 240

Query: 241 TMSLLNLRPDEVTFGALAHLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSG 300
           TMSLL LRPDEV+FGALA+LYALKGL+QKIIEL+ LMGSFGF  K LFF+NLVSGYVN+ 
Sbjct: 241 TMSLLYLRPDEVSFGALAYLYALKGLDQKIIELEVLMGSFGFTCKDLFFSNLVSGYVNAS 300

Query: 301 DLAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESLTDV 360
           + AAVSKTML  LKDECG HV F EKTYLE+VK F+QSGNLKELS+LI+DAQNLES + V
Sbjct: 301 NFAAVSKTMLRSLKDECGSHVHFGEKTYLEMVKGFIQSGNLKELSALIIDAQNLESSSAV 360

Query: 361 DGSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLI 420
           DGSIGFGIINACVNIGWLD    IL E+NSQGVS+GLGVY+PILKAY+KE RTA ATQLI
Sbjct: 361 DGSIGFGIINACVNIGWLDKAQYILDEMNSQGVSLGLGVYLPILKAYRKEHRTAAATQLI 420

Query: 421 MDVSSSGLQLVAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMES 480
           MD+SSSG+QL AE +DALIEASMSNQDFQSAF LFR MRETRKS+T ASYLTIMTGLME+
Sbjct: 421 MDISSSGIQLDAENYDALIEASMSNQDFQSAFTLFRSMRETRKSDTKASYLTIMTGLMEN 480

Query: 481 HRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQT 540
           HRPELMAAFLDE+VEDPLVEVGTHDWNSIIHAFCKAGRLEDARRT+RRMKFLQFEPNEQT
Sbjct: 481 HRPELMAAFLDEIVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTYRRMKFLQFEPNEQT 540

Query: 541 FLSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVM 600
           FLSLINGYVS ERYFCVLMLWNELKWK+T NGE G KLD+NLVDAFLYALVKGGFFDAVM
Sbjct: 541 FLSLINGYVSAERYFCVLMLWNELKWKVTPNGESGIKLDNNLVDAFLYALVKGGFFDAVM 600

Query: 601 QVVEKTKDSKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 656
           QVVEKTKD+K F+DKWKYKQAFMETHKKLKVAKLRRRN++KM+SLI FKNW GLNA
Sbjct: 601 QVVEKTKDTKIFIDKWKYKQAFMETHKKLKVAKLRRRNYKKMESLIAFKNWAGLNA 656

[Close]
BLAST of CmoCh18G011260 vs. NCBI nr
Match: gi|645277609|ref|XP_008243851.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g69290 [Prunus mume])

HSP 1 Score: 875.5 bits (2261), Expect = 5.6e-251
Identity = 440/656 (67.07%), Postives = 542/656 (82.62%), Query Frame = 1 

Query: 1   MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTTD 60
           MW++A+  +P R FSSTPE+ +LYSFLQPS+FA KR    PSQ+S        P+ L  D
Sbjct: 1   MWRKALTLLPHRPFSSTPEIPTLYSFLQPSVFALKR-DLPPSQKSQCDLPTPPPKTLAPD 60

Query: 61  RVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRAF 120
            +A +ETTLHKSL+T +TDEAWKSFK LT SS FP KSLTNSLI HLSS+G +HNLKRAF
Sbjct: 61  HIATLETTLHKSLITHNTDEAWKSFKTLTGSSAFPSKSLTNSLITHLSSLGEIHNLKRAF 120

Query: 121 ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELVS 180
           A+ V+V+EK P  LDF +V TLL +MKCANTAAPA +LIK + +NR F+PF  WGN L+ 
Sbjct: 121 ATVVYVVEKNPGFLDFETVGTLLDAMKCANTAAPAFALIKSVFKNRFFLPFSVWGNVLIE 180

Query: 181 ICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVET 240
           I R++G+ + FLRVFEE CRI L+E+L+SMKPDL ACNAA+EGCC ELESV+DAE VVET
Sbjct: 181 ISRKNGNFVAFLRVFEENCRIALDEKLESMKPDLAACNAAMEGCCRELESVSDAEKVVET 240

Query: 241 MSLLNLRPDEVTFGALAHLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSGD 300
           M++L +RPDE +FG LA+LYALKGLE+KI EL+ LMG FGF++K +F +NL++GYV SG 
Sbjct: 241 MAVLGVRPDEWSFGFLAYLYALKGLEEKITELEGLMGGFGFSNKRVFQSNLINGYVKSGK 300

Query: 301 LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESLTD-V 360
           L +VS T+L  L++  GE +   E+TY EVVK ++ + ++KEL++LI++AQ LES T  V
Sbjct: 301 LESVSATILRILREGDGECLNLGEETYCEVVKGYLMNASVKELATLIIEAQKLESSTVMV 360

Query: 361 DGSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLI 420
           D S+G+GI+NACV+IG  D  H+IL E+N+QG S+GLGVY+PILKAY KE RTAEATQL+
Sbjct: 361 DRSVGYGIVNACVHIGLSDKAHSILDEMNAQGGSLGLGVYVPILKAYCKEHRTAEATQLV 420

Query: 421 MDVSSSGLQLVAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMES 480
           MD+S+SGLQL   T+DALIE+SMS+QDFQSAF+L+R MRE R S+   SYLTIMTGLME+
Sbjct: 421 MDISNSGLQLDMGTYDALIESSMSSQDFQSAFSLYRDMREARISDLKGSYLTIMTGLMEN 480

Query: 481 HRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQT 540
           HRPELMAAFLDEVVEDP +EVGTHDWNSIIHAFCKAGRLEDARRTFRRM FLQ +PNEQT
Sbjct: 481 HRPELMAAFLDEVVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMIFLQHKPNEQT 540

Query: 541 FLSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVM 600
           +LSLI+GYVS E+YFCVLMLW+E+K  ++ +GE+G K D N+VDAFLYALVKGGFFDAVM
Sbjct: 541 YLSLISGYVSVEKYFCVLMLWHEVKRNVSVDGEKGIKFDHNMVDAFLYALVKGGFFDAVM 600

Query: 601 QVVEKTKDSKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 656
           QVVEK+++ K FVDKW+YKQAFMETHKKLKV+KLR+RN RKM++L+ FKNW GLNA
Sbjct: 601 QVVEKSQEMKVFVDKWRYKQAFMETHKKLKVSKLRKRNFRKMEALVAFKNWAGLNA 655

[Close]
BLAST of CmoCh18G011260 vs. NCBI nr
Match: gi|596273770|ref|XP_007225125.1| (hypothetical protein PRUPE_ppa002589mg [Prunus persica])

HSP 1 Score: 875.5 bits (2261), Expect = 5.6e-251
Identity = 440/656 (67.07%), Postives = 539/656 (82.16%), Query Frame = 1 

Query: 1   MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTTD 60
           MW++A+  +P R FSSTPE+ +LYSFLQPS+FA KR    PSQ+S        P+ L  D
Sbjct: 1   MWRKALTLLPHRPFSSTPEIPTLYSFLQPSVFALKR-DLPPSQKSHSDLPTPPPKTLAPD 60

Query: 61  RVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRAF 120
            +  +E TLHKSL+T +TDEAWKSFK LT SS FP KSLTNSLI HLSS+G +HNLKRAF
Sbjct: 61  HITTLEATLHKSLITHNTDEAWKSFKTLTGSSAFPSKSLTNSLITHLSSLGDIHNLKRAF 120

Query: 121 ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELVS 180
           A+ V+V+EK P  LDF +V TLL +MKCANTAAPA +LIK + +NR F+PF  WGN L+ 
Sbjct: 121 ATVVYVVEKNPGFLDFETVGTLLDAMKCANTAAPAFALIKSVFKNRFFLPFSVWGNVLIE 180

Query: 181 ICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVET 240
           I R++G+ + FLRVFEE CRI L+E+L+SMKPDL ACNAALEGCC ELESV+DAE VVET
Sbjct: 181 ISRKNGNFVAFLRVFEENCRIALDEKLESMKPDLAACNAALEGCCRELESVSDAEKVVET 240

Query: 241 MSLLNLRPDEVTFGALAHLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSGD 300
           M++L +RPDE +FG LA+LYALKGLE+KI EL+ LMG FGF++K +F +NL++GYV SG 
Sbjct: 241 MAVLGVRPDESSFGFLAYLYALKGLEEKITELEGLMGGFGFSNKRVFQSNLINGYVKSGK 300

Query: 301 LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESLTDV- 360
           L +VS T+L  L++  G+ +   E+TY EVVK ++ S ++KEL++LI++AQ LES T V 
Sbjct: 301 LESVSATILRILREGDGDFLNLGEETYCEVVKGYLMSASVKELATLIIEAQKLESSTVVV 360

Query: 361 DGSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLI 420
           D S+G+GI+NACV+IG  D  H IL E+N+QG S+GLGVY+PILKAY KE RTAEATQL+
Sbjct: 361 DRSVGYGIVNACVHIGLSDKAHGILDEMNAQGGSLGLGVYVPILKAYCKEHRTAEATQLV 420

Query: 421 MDVSSSGLQLVAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMES 480
           MDVS+SGLQL   T+DALIE+SMS+QDFQSAF+L+R MRE R S+   SYLTIMTGLME+
Sbjct: 421 MDVSNSGLQLDTGTYDALIESSMSSQDFQSAFSLYRDMREARISDLKGSYLTIMTGLMEN 480

Query: 481 HRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQT 540
           HRPELMAAFLDEVVEDP +EVGTHDWNSIIHAFCKAGRLEDARRTFRRM FLQ +PNEQT
Sbjct: 481 HRPELMAAFLDEVVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMIFLQHKPNEQT 540

Query: 541 FLSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVM 600
           +LSLI+GYVS E+YFCVLMLW+E+K  ++ +GE+G K D N+VDAFLYALVKGGFFDAVM
Sbjct: 541 YLSLISGYVSVEKYFCVLMLWHEVKRNVSVDGEKGIKFDHNMVDAFLYALVKGGFFDAVM 600

Query: 601 QVVEKTKDSKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 656
           QVVEK+++ K FVDKW+YKQAFMETHKKLKV+KLR+RN RKM++L+ FKNW GLNA
Sbjct: 601 QVVEKSQEMKVFVDKWRYKQAFMETHKKLKVSKLRKRNFRKMEALVAFKNWAGLNA 655

[Close]
BLAST of CmoCh18G011260 vs. NCBI nr
Match: gi|1009154419|ref|XP_015895160.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g69290 [Ziziphus jujuba])

HSP 1 Score: 858.6 bits (2217), Expect = 7.1e-246
Identity = 433/658 (65.81%), Postives = 530/658 (80.55%), Query Frame = 1 

Query: 1   MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQT--PQILT 60
           MWK+ +  +P R FSSTPE+ +LYSFLQPS+FA K  P   S  S    +  T  P+ LT
Sbjct: 8   MWKKKLAWLPIRRFSSTPEIPTLYSFLQPSIFALKTDPSCSSSFSLPTTKLPTSPPKTLT 67

Query: 61  TDRVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKR 120
            D + ++ETT+H S+LT++ DEAWKSFK+LT SS FP KS+TN LIAHLSS+  VHNLKR
Sbjct: 68  PDHITSLETTIHNSILTNNIDEAWKSFKILTGSSAFPSKSITNFLIAHLSSLKDVHNLKR 127

Query: 121 AFASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNEL 180
           AFAS V+V+EK P LL+F +VK+LL S  CANTAAPA +LIKCM +NR FVPF  WGN L
Sbjct: 128 AFASVVYVVEKYPGLLEFETVKSLLDSFNCANTAAPAFALIKCMFKNRFFVPFSVWGNVL 187

Query: 181 VSICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVV 240
           V I R++G+   FLRVFEE CRI L+E+LD MKPDL ACNAALEGCC ELESV DAE V+
Sbjct: 188 VEISRKNGNFSAFLRVFEENCRIALDEKLDFMKPDLIACNAALEGCCRELESVDDAEKVI 247

Query: 241 ETMSLLNLRPDEVTFGALAHLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNS 300
           ETMS+L +RPDE++FG LA+LYALKGLE+KI EL+ LM  FGF+ K +F  NL+ GYV S
Sbjct: 248 ETMSILGVRPDELSFGYLAYLYALKGLEEKISELENLMIGFGFSDKRVFQRNLIGGYVKS 307

Query: 301 GDLAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESLTD 360
           G+  +V +T+L GL++  GE++   E+TY EVVK F+ +G +K L++L+++A+ LE  T 
Sbjct: 308 GNSESVLETILSGLREGNGEYLNLSEETYCEVVKGFLPNGGIKALANLVIEAEKLEPSTV 367

Query: 361 V-DGSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQ 420
           V D S+G+GII+ACVN+G LD  H+IL E+N+Q   +GLGVY+PILKAY KE RTAEATQ
Sbjct: 368 VADKSVGYGIISACVNLGLLDKAHSILDEMNAQEGYLGLGVYVPILKAYCKEHRTAEATQ 427

Query: 421 LIMDVSSSGLQLVAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLM 480
           L+MD+S+SGLQL   T+DALI+AS+S QDFQSA +LFR MR+ R S+   SYLTIMTGLM
Sbjct: 428 LVMDISNSGLQLDVGTYDALIDASISGQDFQSALSLFRDMRDARLSDLKGSYLTIMTGLM 487

Query: 481 ESHRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNE 540
           E+HRPELMAAFLD+VVEDP VEVGTHDWNSIIHAFCKAGRLEDARRTFRRM FLQF+PNE
Sbjct: 488 ENHRPELMAAFLDDVVEDPRVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMIFLQFKPNE 547

Query: 541 QTFLSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDA 600
           QT+LSLI+GYV  E+YF VLMLWNE+K  ++ +GE+G K D NLVDAFLYAL+KGGFFDA
Sbjct: 548 QTYLSLISGYVLAEKYFSVLMLWNEVKRNLSVDGEKGLKFDQNLVDAFLYALIKGGFFDA 607

Query: 601 VMQVVEKTKDSKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 656
            MQVVEK+++ K FVDKW+YKQAFMETHKKLKVAKLR+RN RKM++L+ FKNW GLNA
Sbjct: 608 AMQVVEKSQEMKIFVDKWRYKQAFMETHKKLKVAKLRKRNFRKMEALVAFKNWAGLNA 665

The following BLAST results are available for this feature:
BLAST of CmoCh18G011260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP110_ARATH2.0e-22461.54Pentatricopeptide repeat-containing protein At1g69290 OS=Arabidopsis thaliana GN... [more]
PP109_ARATH6.3e-18654.25Pentatricopeptide repeat-containing protein At1g68980, mitochondrial OS=Arabidop... [more]
PPR6_ARATH1.6e-5635.61Pentatricopeptide repeat-containing protein At1g03100, mitochondrial OS=Arabidop... [more]
PP317_ARATH1.1e-2024.34Pentatricopeptide repeat-containing protein At4g17616 OS=Arabidopsis thaliana GN... [more]
PPR93_ARATH1.9e-1723.15Pentatricopeptide repeat-containing protein At1g62720 OS=Arabidopsis thaliana GN... [more]
BLAST of CmoCh18G011260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSW9_CUCSA0.0e+0084.15Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606690 PE=4 SV=1[more]
M5XK61_PRUPE3.9e-25167.07Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002589mg PE=4 SV=1[more]
W9QNW1_9ROSA3.1e-24065.61Uncharacterized protein OS=Morus notabilis GN=L484_000401 PE=4 SV=1[more]
A0A061EBF1_THECC1.2e-23965.35Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_011... [more]
A0A067G4K7_CITSI8.5e-23864.40Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g038801mg PE=4 SV=1[more]
BLAST of CmoCh18G011260 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G69290.11.1e-22561.54 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G68980.13.6e-18754.25 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G03100.19.1e-5835.61 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G17616.16.2e-2224.34 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G62720.11.1e-1823.15 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
BLAST of CmoCh18G011260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659091218|ref|XP_008446433.1|0.0e+0083.97PREDICTED: pentatricopeptide repeat-containing protein At1g69290 [Cucumis melo][more]
gi|449434724|ref|XP_004135146.1|0.0e+0084.15PREDICTED: pentatricopeptide repeat-containing protein At1g69290 [Cucumis sativu... [more]
gi|645277609|ref|XP_008243851.1|5.6e-25167.07PREDICTED: pentatricopeptide repeat-containing protein At1g69290 [Prunus mume][more]
gi|596273770|ref|XP_007225125.1|5.6e-25167.07hypothetical protein PRUPE_ppa002589mg [Prunus persica][more]
gi|1009154419|ref|XP_015895160.1|7.1e-24665.81PREDICTED: pentatricopeptide repeat-containing protein At1g69290 [Ziziphus jujub... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0030247 polysaccharide binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G011260.1CmoCh18G011260.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 505..548
score: 9.6
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 418..469
score: 0.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 505..537
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 536..566
score: 5.667coord: 501..535
score: 11.915coord: 323..353
score: 5.075coord: 360..394
score: 5.733coord: 213..248
score: 7.837coord: 430..460
score: 6.873coord: 465..499
score: 5.557coord: 249..283
score: 6.895coord: 578..612
score: 5.601coord: 284..315
score: 5.338coord: 395..429
score: 6
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 322..577
score: 1.2E-211coord: 12..304
score: 1.2E
NoneNo IPR availablePANTHERPTHR24015:SF304SUBFAMILY NOT NAMEDcoord: 322..577
score: 1.2E-211coord: 12..304
score: 1.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh18G011260Cucsa.284500Cucumber (Gy14) v1cgycmoB0789
CmoCh18G011260CmaCh18G011050Cucurbita maxima (Rimu)cmacmoB406
CmoCh18G011260Cla000389Watermelon (97103) v1cmowmB365
CmoCh18G011260Csa5G606690Cucumber (Chinese Long) v2cmocuB406
CmoCh18G011260MELO3C012153Melon (DHL92) v3.5.1cmomeB344
CmoCh18G011260ClCG05G023710Watermelon (Charleston Gray)cmowcgB358
CmoCh18G011260CSPI05G24310Wild cucumber (PI 183967)cmocpiB411
CmoCh18G011260Lsi04G003620Bottle gourd (USVL1VR-Ls)cmolsiB364
CmoCh18G011260Cp4.1LG09g02090Cucurbita pepo (Zucchini)cmocpeB376
CmoCh18G011260MELO3C012153.2Melon (DHL92) v3.6.1cmomedB395
CmoCh18G011260CsaV3_5G033320Cucumber (Chinese Long) v3cmocucB0487
CmoCh18G011260Cla97C05G105680Watermelon (97103) v2cmowmbB403
CmoCh18G011260Bhi07G001222Wax gourdcmowgoB0535
CmoCh18G011260CsGy5G023840Cucumber (Gy14) v2cgybcmoB603
CmoCh18G011260Carg17311Silver-seed gourdcarcmoB0140
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh18G011260Cucumber (Gy14) v2cgybcmoB092
CmoCh18G011260Melon (DHL92) v3.6.1cmomedB401
CmoCh18G011260Melon (DHL92) v3.6.1cmomedB412
CmoCh18G011260Melon (DHL92) v3.6.1cmomedB420
CmoCh18G011260Silver-seed gourdcarcmoB0340
CmoCh18G011260Silver-seed gourdcarcmoB0811
CmoCh18G011260Cucumber (Chinese Long) v3cmocucB0466
CmoCh18G011260Watermelon (97103) v2cmowmbB397
CmoCh18G011260Watermelon (97103) v2cmowmbB411
CmoCh18G011260Watermelon (97103) v2cmowmbB417
CmoCh18G011260Wax gourdcmowgoB0503
CmoCh18G011260Wax gourdcmowgoB0525
CmoCh18G011260Cucurbita moschata (Rifu)cmocmoB340
CmoCh18G011260Cucumber (Gy14) v1cgycmoB0265
CmoCh18G011260Cucurbita maxima (Rimu)cmacmoB709
CmoCh18G011260Wild cucumber (PI 183967)cmocpiB391
CmoCh18G011260Cucumber (Chinese Long) v2cmocuB391
CmoCh18G011260Melon (DHL92) v3.5.1cmomeB351
CmoCh18G011260Melon (DHL92) v3.5.1cmomeB367
CmoCh18G011260Watermelon (Charleston Gray)cmowcgB354
CmoCh18G011260Watermelon (Charleston Gray)cmowcgB364
CmoCh18G011260Watermelon (Charleston Gray)cmowcgB372
CmoCh18G011260Watermelon (97103) v1cmowmB386
CmoCh18G011260Watermelon (97103) v1cmowmB359
CmoCh18G011260Watermelon (97103) v1cmowmB396
CmoCh18G011260Cucurbita pepo (Zucchini)cmocpeB395
CmoCh18G011260Bottle gourd (USVL1VR-Ls)cmolsiB374
CmoCh18G011260Bottle gourd (USVL1VR-Ls)cmolsiB360
CmoCh18G011260Bottle gourd (USVL1VR-Ls)cmolsiB382