Carg17311 (gene) Silver-seed gourd

Overview
NameCarg17311
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat
LocationCucurbita_argyrosperma_scaffold_135 : 510353 .. 512320 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAAAAGAGCTGTGTGTTCGATTCCTCGCAGGTTGTTTTCTTCTACACCAGAAGTCTCATCGCTCTACTCCTTCCTCCAACCCTCCCTCTTCGCCCCAAAGCGAGCACCATTTTCGCCATCTCAAGAATCCACCGACCTCCGTCAGAATCAAACTCCTCAAATTTTGACTACAGACCGTGTCGCCGCCGTAGAAACGACGCTCCACAAGTCCCTTCTCACCAGCGACACTGACGAGGCATGGAAATCCTTCAAACTGCTCACGAAAAGCTCCGTTTTCCCATGTAAGTCTCTCACTAATTCACTTATTGCCCACTTATCCTCAATCGGGGGCGTTCATAATCTGAAAAGAGCCTTTGCATCTGCGGTGTTTGTTATTGAAAAGAAACCCGAATTATTGGATTTTGGATCTGTCAAAACCCTATTAGCTTCTATGAAATGTGCCAACACTGCTGCCCCTGCTGTTTCTTTGATTAAATGCATGTTGAGGAATCGATGTTTTGTGCCTTTTGAATTCTGGGGCAATGAACTTGTTAGTATTTGCAGGCAGAGTGGTAGTTTGATTCCCTTTTTAAGAGTGTTTGAAGAGATTTGTAGGATTGTTTTAAATGAGAGGTTAGATTCTATGAAACCAGATCTCAATGCGTGTAATGCAGCACTTGAGGGGTGTTGCCATGAGCTTGAATCTGTAACAGATGCCGAGCACGTCGTTGAAACGATGTCGCTTTTGAATCTTCGGCCTGATGAAGTTACTTTTGGTACTCTTGCTTATTTGTATGCATTGAAGGGGCTTGAACAGAAGATAATCGAGTTAAAACGTTTGATGGGAAGTTTTGGTTTTGCATCTAAGAGTCTGTTCTTTAATAATTTGGTAAGTGGATACGTTAATTCGGGCGACTTAGCTGCTGTTTCGAAGACTATGTTGGATGGTTTGAAAGATGAATGTGGAGAACATGTAAGATTTGAGGAAAAAACGTATTTGGAAGTGGTTAAGGCTTTTGTTCAGAGTGGAAATCTGAAGGAATTATCTTCATTGATTGTTGATGCTCAGAATTTAGAGTCTTCAACGGACGTTGATGGATCGATCGGATTCGGTATCATTAATGCTTGTGTTAATATTGGATGGTTAGATAATGTGCACGCCATTCTGAAAGAAATCAATTCCCAGGGAGTTTCTGTAGGCCTTGGAGTCTATATGCCGATCCTGAAGGCGTACCAGAAGGAGCGTCGAACAGCTGAAGCCACCCAATTAATCATGGATGTTAGCAGTTCCGGGCTACAGTTGGATGCAGAAACTTTTGATGCTCTTATAGAAGCATCGATGTCGAATCAAGATTTTCAGTCGGCTTTCGCTTTGTTCAGGAAAATGAGGGAAACGAGAAAATCCAACACGAACGCTAGCTATCTAACTATTATGACTGGCTTAATGGAGAGCCATAGGCCTGAGTTGATGGCTGCCTTCTTAGACGAAGTTGTCGAGGATCCTCTCGTTGAAGTTGGAACTCATGATTGGAACTCTATTATACATGCCTTTTGCAAAGCTGGAAGGCTCGAGGATGCGAGAAGAACGTTTCGAAGAATGAAGTTTCTGCAGTTTGAACCGAATGAACAAACGTTCTTGTCTCTAATTAATGGCTATGTGTCGGGAGAGAGATATTTCTGTGTTTTGATGCTGTGGAACGAACTTAAGTGGAAGATTACTGCAAATGGGGAGAGAGGTTTCAAACTCGATAGCAACTTGGTTGACGCGTTCTTGTATGCTTTGGTTAAGGGAGGTTTCTTCGACGCCGTGATGCAAGTTGTCGAAAAAACTAAGGATACGAAGACCTTCGTCGATAAGTGGAAATATAAGCAAGCATTCATGGAGACTCATAAGAAACTCAAAGTGGCAAAATTGAGGAGGAGGAACCACAGGAAAATGCAATCACTTATTGATTTCAAGAACTGGGTTGGTTTGAATGCTTGA

mRNA sequence

ATGTGGAAAAGAGCTGTGTGTTCGATTCCTCGCAGGTTGTTTTCTTCTACACCAGAAGTCTCATCGCTCTACTCCTTCCTCCAACCCTCCCTCTTCGCCCCAAAGCGAGCACCATTTTCGCCATCTCAAGAATCCACCGACCTCCGTCAGAATCAAACTCCTCAAATTTTGACTACAGACCGTGTCGCCGCCGTAGAAACGACGCTCCACAAGTCCCTTCTCACCAGCGACACTGACGAGGCATGGAAATCCTTCAAACTGCTCACGAAAAGCTCCGTTTTCCCATGTAAGTCTCTCACTAATTCACTTATTGCCCACTTATCCTCAATCGGGGGCGTTCATAATCTGAAAAGAGCCTTTGCATCTGCGGTGTTTGTTATTGAAAAGAAACCCGAATTATTGGATTTTGGATCTGTCAAAACCCTATTAGCTTCTATGAAATGTGCCAACACTGCTGCCCCTGCTGTTTCTTTGATTAAATGCATGTTGAGGAATCGATGTTTTGTGCCTTTTGAATTCTGGGGCAATGAACTTGTTAGTATTTGCAGGCAGAGTGGTAGTTTGATTCCCTTTTTAAGAGTGTTTGAAGAGATTTGTAGGATTGTTTTAAATGAGAGGTTAGATTCTATGAAACCAGATCTCAATGCGTGTAATGCAGCACTTGAGGGGTGTTGCCATGAGCTTGAATCTGTAACAGATGCCGAGCACGTCGTTGAAACGATGTCGCTTTTGAATCTTCGGCCTGATGAAGTTACTTTTGGTACTCTTGCTTATTTGTATGCATTGAAGGGGCTTGAACAGAAGATAATCGAGTTAAAACGTTTGATGGGAAGTTTTGGTTTTGCATCTAAGAGTCTGTTCTTTAATAATTTGGTAAGTGGATACGTTAATTCGGGCGACTTAGCTGCTGTTTCGAAGACTATGTTGGATGGTTTGAAAGATGAATGTGGAGAACATGTAAGATTTGAGGAAAAAACGTATTTGGAAGTGGTTAAGGCTTTTGTTCAGAGTGGAAATCTGAAGGAATTATCTTCATTGATTGTTGATGCTCAGAATTTAGAGTCTTCAACGGACGTTGATGGATCGATCGGATTCGGTATCATTAATGCTTGTGTTAATATTGGATGGTTAGATAATGTGCACGCCATTCTGAAAGAAATCAATTCCCAGGGAGTTTCTGTAGGCCTTGGAGTCTATATGCCGATCCTGAAGGCGTACCAGAAGGAGCGTCGAACAGCTGAAGCCACCCAATTAATCATGGATGTTAGCAGTTCCGGGCTACAGTTGGATGCAGAAACTTTTGATGCTCTTATAGAAGCATCGATGTCGAATCAAGATTTTCAGTCGGCTTTCGCTTTGTTCAGGAAAATGAGGGAAACGAGAAAATCCAACACGAACGCTAGCTATCTAACTATTATGACTGGCTTAATGGAGAGCCATAGGCCTGAGTTGATGGCTGCCTTCTTAGACGAAGTTGTCGAGGATCCTCTCGTTGAAGTTGGAACTCATGATTGGAACTCTATTATACATGCCTTTTGCAAAGCTGGAAGGCTCGAGGATGCGAGAAGAACGTTTCGAAGAATGAAGTTTCTGCAGTTTGAACCGAATGAACAAACGTTCTTGTCTCTAATTAATGGCTATGTGTCGGGAGAGAGATATTTCTGTGTTTTGATGCTGTGGAACGAACTTAAGTGGAAGATTACTGCAAATGGGGAGAGAGGTTTCAAACTCGATAGCAACTTGGTTGACGCGTTCTTGTATGCTTTGGTTAAGGGAGGTTTCTTCGACGCCGTGATGCAAGTTGTCGAAAAAACTAAGGATACGAAGACCTTCGTCGATAAGTGGAAATATAAGCAAGCATTCATGGAGACTCATAAGAAACTCAAAGTGGCAAAATTGAGGAGGAGGAACCACAGGAAAATGCAATCACTTATTGATTTCAAGAACTGGGTTGGTTTGAATGCTTGA

Coding sequence (CDS)

ATGTGGAAAAGAGCTGTGTGTTCGATTCCTCGCAGGTTGTTTTCTTCTACACCAGAAGTCTCATCGCTCTACTCCTTCCTCCAACCCTCCCTCTTCGCCCCAAAGCGAGCACCATTTTCGCCATCTCAAGAATCCACCGACCTCCGTCAGAATCAAACTCCTCAAATTTTGACTACAGACCGTGTCGCCGCCGTAGAAACGACGCTCCACAAGTCCCTTCTCACCAGCGACACTGACGAGGCATGGAAATCCTTCAAACTGCTCACGAAAAGCTCCGTTTTCCCATGTAAGTCTCTCACTAATTCACTTATTGCCCACTTATCCTCAATCGGGGGCGTTCATAATCTGAAAAGAGCCTTTGCATCTGCGGTGTTTGTTATTGAAAAGAAACCCGAATTATTGGATTTTGGATCTGTCAAAACCCTATTAGCTTCTATGAAATGTGCCAACACTGCTGCCCCTGCTGTTTCTTTGATTAAATGCATGTTGAGGAATCGATGTTTTGTGCCTTTTGAATTCTGGGGCAATGAACTTGTTAGTATTTGCAGGCAGAGTGGTAGTTTGATTCCCTTTTTAAGAGTGTTTGAAGAGATTTGTAGGATTGTTTTAAATGAGAGGTTAGATTCTATGAAACCAGATCTCAATGCGTGTAATGCAGCACTTGAGGGGTGTTGCCATGAGCTTGAATCTGTAACAGATGCCGAGCACGTCGTTGAAACGATGTCGCTTTTGAATCTTCGGCCTGATGAAGTTACTTTTGGTACTCTTGCTTATTTGTATGCATTGAAGGGGCTTGAACAGAAGATAATCGAGTTAAAACGTTTGATGGGAAGTTTTGGTTTTGCATCTAAGAGTCTGTTCTTTAATAATTTGGTAAGTGGATACGTTAATTCGGGCGACTTAGCTGCTGTTTCGAAGACTATGTTGGATGGTTTGAAAGATGAATGTGGAGAACATGTAAGATTTGAGGAAAAAACGTATTTGGAAGTGGTTAAGGCTTTTGTTCAGAGTGGAAATCTGAAGGAATTATCTTCATTGATTGTTGATGCTCAGAATTTAGAGTCTTCAACGGACGTTGATGGATCGATCGGATTCGGTATCATTAATGCTTGTGTTAATATTGGATGGTTAGATAATGTGCACGCCATTCTGAAAGAAATCAATTCCCAGGGAGTTTCTGTAGGCCTTGGAGTCTATATGCCGATCCTGAAGGCGTACCAGAAGGAGCGTCGAACAGCTGAAGCCACCCAATTAATCATGGATGTTAGCAGTTCCGGGCTACAGTTGGATGCAGAAACTTTTGATGCTCTTATAGAAGCATCGATGTCGAATCAAGATTTTCAGTCGGCTTTCGCTTTGTTCAGGAAAATGAGGGAAACGAGAAAATCCAACACGAACGCTAGCTATCTAACTATTATGACTGGCTTAATGGAGAGCCATAGGCCTGAGTTGATGGCTGCCTTCTTAGACGAAGTTGTCGAGGATCCTCTCGTTGAAGTTGGAACTCATGATTGGAACTCTATTATACATGCCTTTTGCAAAGCTGGAAGGCTCGAGGATGCGAGAAGAACGTTTCGAAGAATGAAGTTTCTGCAGTTTGAACCGAATGAACAAACGTTCTTGTCTCTAATTAATGGCTATGTGTCGGGAGAGAGATATTTCTGTGTTTTGATGCTGTGGAACGAACTTAAGTGGAAGATTACTGCAAATGGGGAGAGAGGTTTCAAACTCGATAGCAACTTGGTTGACGCGTTCTTGTATGCTTTGGTTAAGGGAGGTTTCTTCGACGCCGTGATGCAAGTTGTCGAAAAAACTAAGGATACGAAGACCTTCGTCGATAAGTGGAAATATAAGCAAGCATTCATGGAGACTCATAAGAAACTCAAAGTGGCAAAATTGAGGAGGAGGAACCACAGGAAAATGCAATCACTTATTGATTTCAAGAACTGGGTTGGTTTGAATGCTTGA

Protein sequence

MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTTDRVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRAFASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELVSICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVETMSLLNLRPDEVTFGTLAYLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSGDLAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESSTDVDGSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIMDVSSSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMESHRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTFLSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVMQVVEKTKDTKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA
Homology
[Close]
BLAST of Carg17311 vs. NCBI nr
Match: XP_022945947.1 (pentatricopeptide repeat-containing protein At1g69290 [Cucurbita moschata])

HSP 1 Score: 1277.3 bits (3304), Expect = 0.0e+00
Identity = 650/655 (99.24%), Postives = 652/655 (99.54%), Query Frame = 0 

Query: 1   MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTTD 60
           MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTTD
Sbjct: 1   MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTTD 60

Query: 61  RVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRAF 120
           RVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRAF
Sbjct: 61  RVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRAF 120

Query: 121 ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELVS 180
           ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELVS
Sbjct: 121 ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELVS 180

Query: 181 ICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVET 240
           ICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVET
Sbjct: 181 ICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVET 240

Query: 241 MSLLNLRPDEVTFGTLAYLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSGD 300
           MSLLNLRPDEVTFG LA+LYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSGD
Sbjct: 241 MSLLNLRPDEVTFGALAHLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSGD 300

Query: 301 LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESSTDVD 360
           LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLES TDVD
Sbjct: 301 LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESLTDVD 360

Query: 361 GSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIM 420
           GSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIM
Sbjct: 361 GSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIM 420

Query: 421 DVSSSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMESH 480
           DVSSSGLQL AETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMESH
Sbjct: 421 DVSSSGLQLVAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMESH 480

Query: 481 RPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTF 540
           RPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTF
Sbjct: 481 RPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTF 540

Query: 541 LSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVMQ 600
           LSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVMQ
Sbjct: 541 LSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVMQ 600

Query: 601 VVEKTKDTKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 656
           VVEKTKD+KTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA
Sbjct: 601 VVEKTKDSKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 655

[Close]
BLAST of Carg17311 vs. NCBI nr
Match: XP_023541058.1 (pentatricopeptide repeat-containing protein At1g69290 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1275.0 bits (3298), Expect = 0.0e+00
Identity = 649/655 (99.08%), Postives = 651/655 (99.39%), Query Frame = 0 

Query: 1   MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTTD 60
           MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTTD
Sbjct: 1   MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTTD 60

Query: 61  RVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRAF 120
           RVAAVETTLH SLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIG VHNLKRAF
Sbjct: 61  RVAAVETTLHNSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGDVHNLKRAF 120

Query: 121 ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELVS 180
           ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCML+NRCFVPFEFWGNELVS
Sbjct: 121 ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLKNRCFVPFEFWGNELVS 180

Query: 181 ICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVET 240
           ICRQSGSLIPFLRVFEEICRIVLNERL SMKPDLNACNAALEGCCHELESVTDAEHVVET
Sbjct: 181 ICRQSGSLIPFLRVFEEICRIVLNERLYSMKPDLNACNAALEGCCHELESVTDAEHVVET 240

Query: 241 MSLLNLRPDEVTFGTLAYLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSGD 300
           MSLLNLRPDEVTFG+LAYLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGY NSGD
Sbjct: 241 MSLLNLRPDEVTFGSLAYLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYGNSGD 300

Query: 301 LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESSTDVD 360
           LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESSTDVD
Sbjct: 301 LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESSTDVD 360

Query: 361 GSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIM 420
           GSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIM
Sbjct: 361 GSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIM 420

Query: 421 DVSSSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMESH 480
           DVSSSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMESH
Sbjct: 421 DVSSSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMESH 480

Query: 481 RPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTF 540
           RPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTF
Sbjct: 481 RPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTF 540

Query: 541 LSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVMQ 600
           LSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVMQ
Sbjct: 541 LSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVMQ 600

Query: 601 VVEKTKDTKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 656
           VVEKTKDTKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA
Sbjct: 601 VVEKTKDTKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 655

[Close]
BLAST of Carg17311 vs. NCBI nr
Match: XP_022968525.1 (pentatricopeptide repeat-containing protein At1g69290 [Cucurbita maxima])

HSP 1 Score: 1254.6 bits (3245), Expect = 0.0e+00
Identity = 638/655 (97.40%), Postives = 645/655 (98.47%), Query Frame = 0 

Query: 1   MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTTD 60
           MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFA KRAPFSPSQESTDLRQNQTPQ LTTD
Sbjct: 1   MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFATKRAPFSPSQESTDLRQNQTPQSLTTD 60

Query: 61  RVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRAF 120
           RVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIG VHNLKRAF
Sbjct: 61  RVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGDVHNLKRAF 120

Query: 121 ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELVS 180
           ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPA+SLIKCML+NRCFVPFE WGNELVS
Sbjct: 121 ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPALSLIKCMLKNRCFVPFECWGNELVS 180

Query: 181 ICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVET 240
           ICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVET
Sbjct: 181 ICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVET 240

Query: 241 MSLLNLRPDEVTFGTLAYLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSGD 300
           MSLLNLRPDEVT G LAYLYALKGLEQKIIELK LMGSFGF SKSLFFNNLVSGYVNSGD
Sbjct: 241 MSLLNLRPDEVTIGALAYLYALKGLEQKIIELKCLMGSFGFTSKSLFFNNLVSGYVNSGD 300

Query: 301 LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESSTDVD 360
           LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLES TDVD
Sbjct: 301 LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESLTDVD 360

Query: 361 GSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIM 420
           GSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIM
Sbjct: 361 GSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIM 420

Query: 421 DVSSSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMESH 480
           DVSSSG+QLDAE+FDALIEASMSNQDFQSAFALFRKMRETRKS+TNASYLTIMTGLMESH
Sbjct: 421 DVSSSGIQLDAESFDALIEASMSNQDFQSAFALFRKMRETRKSDTNASYLTIMTGLMESH 480

Query: 481 RPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTF 540
           RPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTF
Sbjct: 481 RPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTF 540

Query: 541 LSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVMQ 600
           LSLI+GYVSGERYFCVLMLWNELKWKIT NGE+GFKLDSNLVDAFLYALVKGGFFDAVMQ
Sbjct: 541 LSLIHGYVSGERYFCVLMLWNELKWKITPNGEKGFKLDSNLVDAFLYALVKGGFFDAVMQ 600

Query: 601 VVEKTKDTKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 656
           VVEKTKDTKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA
Sbjct: 601 VVEKTKDTKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 655

[Close]
BLAST of Carg17311 vs. NCBI nr
Match: XP_022149103.1 (pentatricopeptide repeat-containing protein At1g69290 [Momordica charantia])

HSP 1 Score: 1111.3 bits (2873), Expect = 0.0e+00
Identity = 564/655 (86.11%), Postives = 599/655 (91.45%), Query Frame = 0 

Query: 1   MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTTD 60
           MWK A+ SIPRR FSS PE+ +LYSFLQPSLFA KR P S SQESTDLRQN TPQ LT D
Sbjct: 1   MWKTALYSIPRRSFSSAPEIPTLYSFLQPSLFALKRTPLSSSQESTDLRQNPTPQTLTPD 60

Query: 61  RVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRAF 120
           RVAAVETTLHKSLLTSDTDEAWKSFKLLT+SS FPCKSLTNSLIAHLSSIG VHNLKRAF
Sbjct: 61  RVAAVETTLHKSLLTSDTDEAWKSFKLLTRSSAFPCKSLTNSLIAHLSSIGDVHNLKRAF 120

Query: 121 ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELVS 180
           AS VFVIEKKPELL+F SVKTLLASMKCANTAAPA+SLIKCM +NRCFVPF  WGNELV 
Sbjct: 121 ASVVFVIEKKPELLEFESVKTLLASMKCANTAAPALSLIKCMFKNRCFVPFSVWGNELVD 180

Query: 181 ICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVET 240
           ICRQSGSLIPFLRVFEE CRI L+ERLD MKPDL ACNAALEGCCHELESV DAE VVET
Sbjct: 181 ICRQSGSLIPFLRVFEENCRIALDERLDFMKPDLIACNAALEGCCHELESVMDAEKVVET 240

Query: 241 MSLLNLRPDEVTFGTLAYLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSGD 300
           MSLLNLRPDE +FG LAYLYALKGLEQKI+EL+ LMGSFGFA KS FF NLV  YVNSG+
Sbjct: 241 MSLLNLRPDEASFGALAYLYALKGLEQKIMELEGLMGSFGFACKSFFFANLVGAYVNSGN 300

Query: 301 LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESSTDVD 360
            AAVS+TML  LKDE G HV F E+TY+EVVK FVQSGNLKELS+LIVDAQNLESS++VD
Sbjct: 301 FAAVSRTMLRSLKDERGAHVNFGERTYMEVVKGFVQSGNLKELSALIVDAQNLESSSEVD 360

Query: 361 GSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIM 420
           GSIGFGIINACVNIG LD  H+IL EINSQGV +GLGVY+PILKAYQKE RTAEATQLIM
Sbjct: 361 GSIGFGIINACVNIGRLDKAHSILNEINSQGVPLGLGVYLPILKAYQKEHRTAEATQLIM 420

Query: 421 DVSSSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMESH 480
           D+SSSGLQLDAE++DALIEASMS+QDFQSAFALFR MRETRKS+T ASYLTIMTGLME+H
Sbjct: 421 DISSSGLQLDAESYDALIEASMSSQDFQSAFALFRSMRETRKSDTRASYLTIMTGLMENH 480

Query: 481 RPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTF 540
           RPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTF
Sbjct: 481 RPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTF 540

Query: 541 LSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVMQ 600
           LSLINGYVS ERYFCVLMLW+E+KWK+T +GERG KLDSNLVDAFLYALVKGGFFD+VMQ
Sbjct: 541 LSLINGYVSAERYFCVLMLWHEVKWKVTTDGERGIKLDSNLVDAFLYALVKGGFFDSVMQ 600

Query: 601 VVEKTKDTKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 656
           VVEKTKDTK FVDKWKYKQAFMETHKKLKVAKLR+RN+RKM+SLI FKNW GLNA
Sbjct: 601 VVEKTKDTKIFVDKWKYKQAFMETHKKLKVAKLRKRNYRKMESLIAFKNWAGLNA 655

[Close]
BLAST of Carg17311 vs. NCBI nr
Match: XP_008446433.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g69290 [Cucumis melo])

HSP 1 Score: 1106.7 bits (2861), Expect = 0.0e+00
Identity = 553/655 (84.43%), Postives = 594/655 (90.69%), Query Frame = 0 

Query: 1   MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTTD 60
           MWKR +C IP R FSS PE  SLYSFLQPSLFA KR PFSPSQ+STDLRQ+ TPQ LT D
Sbjct: 1   MWKRVLCLIPHRSFSSVPETPSLYSFLQPSLFAKKRTPFSPSQDSTDLRQDPTPQTLTPD 60

Query: 61  RVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRAF 120
           RVAAVET LHKSLLTSDTDEAWKSFKLLT+SS+FP KSLTNSLIAHLSSIG VHNLKRAF
Sbjct: 61  RVAAVETALHKSLLTSDTDEAWKSFKLLTRSSIFPSKSLTNSLIAHLSSIGDVHNLKRAF 120

Query: 121 ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELVS 180
           AS VFVIEKKPELLDFGSVK LLASMKCANTAAPA+SLIKCM +NRCFVPF  WG ELV 
Sbjct: 121 ASVVFVIEKKPELLDFGSVKALLASMKCANTAAPALSLIKCMFKNRCFVPFSVWGKELVD 180

Query: 181 ICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVET 240
           ICRQSGSLIPFLRVFEE CRI L+ERLD +KPDL ACNAALEGCCHELESVTDAE VVET
Sbjct: 181 ICRQSGSLIPFLRVFEENCRIALDERLDFLKPDLIACNAALEGCCHELESVTDAEKVVET 240

Query: 241 MSLLNLRPDEVTFGTLAYLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSGD 300
           MSLL LRPDEV+FG LAYLYALKGLEQKIIEL+ LMGSFGF  K L F+NLVSGYVN+ +
Sbjct: 241 MSLLYLRPDEVSFGALAYLYALKGLEQKIIELEVLMGSFGFTRKDLLFSNLVSGYVNASN 300

Query: 301 LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESSTDVD 360
            AAVSKTML  LKDECG HV F EKTYLE+VK F+QSGNLKELS+LI+DAQNLESS+ VD
Sbjct: 301 FAAVSKTMLRSLKDECGSHVHFGEKTYLEMVKGFIQSGNLKELSALIIDAQNLESSSAVD 360

Query: 361 GSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIM 420
           GSIG+GIINACVNIGWLD    +L EINSQGVS+GLGVYMPILKAY+ ERRT EATQL+M
Sbjct: 361 GSIGYGIINACVNIGWLDKAQYVLNEINSQGVSLGLGVYMPILKAYRTERRTTEATQLVM 420

Query: 421 DVSSSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMESH 480
           D+++SG+QLDAE++D+LIEASMSNQDFQSAF LFR MRETRKS+T ASYLTIMTGLME+H
Sbjct: 421 DITNSGIQLDAESYDSLIEASMSNQDFQSAFTLFRNMRETRKSDTKASYLTIMTGLMENH 480

Query: 481 RPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTF 540
           RPELMAAFLDE+VEDPLVEVGTHDWNSIIHAFCKAGRLEDARRT+RRMKFLQFEPNEQTF
Sbjct: 481 RPELMAAFLDEIVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTYRRMKFLQFEPNEQTF 540

Query: 541 LSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVMQ 600
           LSLINGYVS ERYFCVLMLWNELKWK+T +GE G KLD+NLVDAFLYALVKGGFFDAVMQ
Sbjct: 541 LSLINGYVSAERYFCVLMLWNELKWKVTPDGESGIKLDNNLVDAFLYALVKGGFFDAVMQ 600

Query: 601 VVEKTKDTKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 656
           VVEKTKDTK F+DKWKYKQAFME HKKLKVAKLRRRNHRKM+SLI FKNW GL+A
Sbjct: 601 VVEKTKDTKIFIDKWKYKQAFMENHKKLKVAKLRRRNHRKMESLIAFKNWAGLSA 655

[Close]
BLAST of Carg17311 vs. TAIR10
Match: AT1G69290.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 786.2 bits (2029), Expect = 1.6e-227
Identity = 411/663 (61.99%), Postives = 519/663 (78.28%), Query Frame = 0 

Query: 1   MWKRAVCSIPRRLF-SSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTT 60
           M+++ + SI RR F SS+PE  SLYSFL+PSLF+ K    SPS     L   Q P+ LT 
Sbjct: 1   MFRKTLNSISRRHFSSSSPESPSLYSFLKPSLFSHKPITLSPS-----LSPPQNPKTLTP 60

Query: 61  DRVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGG-----VH 120
           D+ ++ E+TLH SL    TDEAWK+F+ LT +S  P K L NSLI HLS + G      H
Sbjct: 61  DQKSSFESTLHDSLNAHYTDEAWKAFRSLTAASSLPEKRLINSLITHLSGVEGSGESISH 120

Query: 121 NLKRAFASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFW 180
            LKRAFASA +VIEK P LL+F +V+TLL SMK A  A PA++L+KCM +NR FVPF+ W
Sbjct: 121 RLKRAFASAAYVIEKDPILLEFETVRTLLESMKLAKAAGPALALVKCMFKNRYFVPFDLW 180

Query: 181 GNELVSICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDA 240
           G+ ++ ICR++GSL PFL+VF+E CRI ++E+L+ MKPDL A NAALE CC ++ES+ DA
Sbjct: 181 GHLVIDICRENGSLAPFLKVFKESCRISVDEKLEFMKPDLVASNAALEACCRQMESLADA 240

Query: 241 EHVVETMSLLNLRPDEVTFGTLAYLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSG 300
           E+V+E+M++L ++PDE++FG LAYLYA KGL +KI EL+ LM  FGFAS+ + ++N++SG
Sbjct: 241 ENVIESMAVLGVKPDELSFGFLAYLYARKGLREKISELENLMDGFGFASRRILYSNMISG 300

Query: 301 YVNSGDLAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLE 360
           YV SGDL +VS  +L  LK E GE   F  +TY E+VK F++S ++K L+ +I++AQ LE
Sbjct: 301 YVKSGDLDSVSDVILHSLK-EGGEESSFSVETYCELVKGFIESKSVKSLAKVILEAQKLE 360

Query: 361 SS-TDVDGSIGFGIINACVNIGWLDNVHAILKEINSQ-GVSVGLGVYMPILKAYQKERRT 420
           SS   VD S+GFGIINACVN+G+ D  H+IL+E+ +Q G SVG+GVY+PILKAY KE RT
Sbjct: 361 SSYVGVDSSVGFGIINACVNLGFSDKAHSILEEMIAQGGGSVGIGVYVPILKAYCKEYRT 420

Query: 421 AEATQLIMDVSSSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTI 480
           AEATQL+ ++SSSGLQLD E  +ALIEASM+NQDF SAF LFR MRE R  +   SYLTI
Sbjct: 421 AEATQLVTEISSSGLQLDVEISNALIEASMTNQDFISAFTLFRDMRENRVVDLKGSYLTI 480

Query: 481 MTGLMESHRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQ 540
           MTGL+E+ RPELMAAFLDEVVEDP VEV +HDWNSIIHAFCK+GRLEDARRTFRRM FL+
Sbjct: 481 MTGLLENQRPELMAAFLDEVVEDPRVEVNSHDWNSIIHAFCKSGRLEDARRTFRRMVFLR 540

Query: 541 FEPNEQTFLSLINGYVSGERYFCVLMLWNELKWKITA-NGERGFKLDSNLVDAFLYALVK 600
           +EPN QT+LSLINGYVSGE+YF VL+LWNE+K KI++   E+  +LD  LVDAFLYALVK
Sbjct: 541 YEPNNQTYLSLINGYVSGEKYFNVLLLWNEIKGKISSVEAEKRSRLDHALVDAFLYALVK 600

Query: 601 GGFFDAVMQVVEKTKDTKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWV 655
           GGFFDA MQVVEK+++ K FVDKW+YKQAFMETHKKL++ KLR+RN++KM+SL+ FKNW 
Sbjct: 601 GGFFDAAMQVVEKSQEMKIFVDKWRYKQAFMETHKKLRLPKLRKRNYKKMESLVAFKNWA 657

[Close]
BLAST of Carg17311 vs. TAIR10
Match: AT1G68980.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 657.5 bits (1695), Expect = 8.5e-189
Identity = 341/623 (54.74%), Postives = 452/623 (72.55%), Query Frame = 0 

Query: 36  RAPFSPSQESTDLRQNQTPQILTTDRVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFP 95
           R PFS     T          LT  + ++ E+TLH SL+T DTD+AWK F+    +S  P
Sbjct: 12  RRPFSSIPSKT----------LTPHQKSSFESTLHHSLITHDTDQAWKVFRSFAAASSLP 71

Query: 96  CKSLTNSLIAHLSSIGGV-------HNLKRAFASAVFVIEKKPELLDFGSVKTLLASMKC 155
            K L NSLI HLSS           H LKRAF S  +VIEK P LL+F +V+T+L SMK 
Sbjct: 72  DKRLLNSLITHLSSFHNTDQNTSLRHRLKRAFVSTTYVIEKDPILLEFETVRTVLESMKL 131

Query: 156 ANTAAPAVSLIKCMLRNRCFVPFEFWGNELVSICRQSGSLIPFLRVFEEICRIVLNERLD 215
           A  + PA++L++CM +NR FVPF+ WG+ L+ +CR++GSL  FL+VF E CRI ++E+LD
Sbjct: 132 AKASGPALALVECMFKNRYFVPFDLWGDLLIDVCRENGSLAAFLKVFRESCRIAVDEKLD 191

Query: 216 SMKPDLNACNAALEGCCHELESVTDAEHVVETMSLLNLRPDEVTFGTLAYLYALKGLEQK 275
            MKPDL A NAALE CC ++ES+ DAE+++E+M +L ++PDE++FG LAYLYA KGL +K
Sbjct: 192 FMKPDLVASNAALEACCRQMESLADAENLIESMDVLGVKPDELSFGFLAYLYARKGLREK 251

Query: 276 IIELKRLMGSFGFASKSLFFNNLVSGYVNSGDLAAVSKTMLDGLKDECGEHVRFEEKTYL 335
           I EL+ LM   GFAS+ + +++++SGYV SGDL + S  +L  LK   GE   F E+TY 
Sbjct: 252 ISELEDLMDGLGFASRRILYSSMISGYVKSGDLDSASDVILCSLKG-VGEASSFSEETYC 311

Query: 336 EVVKAFVQSGNLKELSSLIVDAQNLES-STDVDGSIGFGIINACVNIGWLDNVHAILKEI 395
           E+V+ F++S +++ L+ LI++AQ LES STDV GS+GFGI+NACV +G+  +  +IL E+
Sbjct: 312 ELVRGFIESKSVESLAKLIIEAQKLESMSTDVGGSVGFGIVNACVKLGF--SGKSILDEL 371

Query: 396 NSQGVSVGLGVYMPILKAYQKERRTAEATQLIMDVSSSGLQLDAETFDALIEASMSNQDF 455
           N+QG S G+GVY+PILKAY KE RT+EATQL+ ++SSSGLQLD ET++ +IEASM+  DF
Sbjct: 372 NAQGGSGGIGVYVPILKAYCKEGRTSEATQLVTEISSSGLQLDVETYNTMIEASMTKHDF 431

Query: 456 QSAFALFRKMRETRKSNTNASYLTIMTGLMESHRPELMAAFLDEVVEDPLVEVGTHDWNS 515
            SA  LFR MRETR ++    YLTIMTGL+E+ RPELMA F++EV+EDP VEV +HDWNS
Sbjct: 432 LSALTLFRDMRETRVADLKRCYLTIMTGLLENQRPELMAEFVEEVMEDPRVEVKSHDWNS 491

Query: 516 IIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTFLSLINGYVSGERYFCVLMLWNELKWKI 575
           IIHAFCK+GRL DA+ TFRRM FLQ+EPN QT+LSLINGYVS E+YF V+++W E K   
Sbjct: 492 IIHAFCKSGRLGDAKSTFRRMTFLQYEPNNQTYLSLINGYVSCEKYFEVVVIWKEFK--- 551

Query: 576 TANGERGFKLDSNLVDAFLYALVKGGFFDAVMQVVEKTKDTKTFVDKWKYKQAFMETHKK 635
               ++  KL+  L DAFL ALVKGGFF   +QV+EK ++ K FVDKW+YK  FMET K 
Sbjct: 552 ----DKKAKLEHALADAFLNALVKGGFFGTALQVIEKCQEMKIFVDKWRYKATFMETQKN 611

Query: 636 LKVAKLRRRNHRKMQSLIDFKNW 651
           L++ KLR+R  +K++ L  FKNW
Sbjct: 612 LRLPKLRKRKMKKIEFLDAFKNW 614

[Close]
BLAST of Carg17311 vs. TAIR10
Match: AT1G03100.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 149.8 bits (377), Expect = 5.7e-36
Identity = 97/337 (28.78%), Postives = 154/337 (45.70%), Query Frame = 0 

Query: 324 EKTYLEVVKAFVQSGNLKELSSLIVDAQNLESSTDVDGSIGFGIINACVNIGWLDNVHAI 383
           E+ Y+++ KAF++SG +KEL+  ++ A++ +S    D S+   +INAC+++G LD  H +
Sbjct: 459 EEIYVKLAKAFLESGKMKELAKFLLKAEHEDSPVSSDNSMLINVINACISLGMLDQAHDL 518

Query: 384 LKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIMDVSSSGLQLDAETFDALIEASMS 443
           L E+   GV                                                   
Sbjct: 519 LDEMRMAGVRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 578

Query: 444 NQDFQSAFALFRKMRETR-KSNTNASYLTIMTGLMESHRPELMAAFLDEVVEDPLVEVGT 503
                                  N  +  ++ G   +    LM+  L E+ E   ++ G 
Sbjct: 579 XXXXXXXXXXXXXXXXXXILRGGNQKFEKLLKGCEGNAEAGLMSKLLREIREVQSLDAGV 638

Query: 504 HDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTFLSLINGYVS-GERYFCVLMLWN 563
           HDWN++IH F K G ++DA +  +RM+ L   PN QTF S++ GY + G +Y  V  LW 
Sbjct: 639 HDWNNVIHFFSKKGLMQDAEKALKRMRSLGHSPNAQTFHSMVTGYAAIGSKYTEVTELWG 698

Query: 564 ELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVMQVVEKTKDTKTFVDKWKYKQAF 623
           E+  K  A      K D  L+DA LY  V+GGFF    +VVE  +    FVDK+KY+  F
Sbjct: 699 EM--KSIAAATSSMKFDQELLDAVLYTFVRGGFFSRANEVVEMMEKKNMFVDKYKYRMLF 758

Query: 624 METHK---KLKVAKLRRRNH-RKMQSLIDFKNWVGLN 655
           ++ HK   K K  K++  +  +K ++ + FK W+GL+
Sbjct: 759 LKYHKTAYKGKAPKVQSESQLKKREAGLVFKKWLGLS 793

[Close]
BLAST of Carg17311 vs. TAIR10
Match: AT3G09650.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 139.4 bits (350), Expect = 7.8e-33
Identity = 102/392 (26.02%), Postives = 173/392 (44.13%), Query Frame = 0 

Query: 281 FASKSLFFNNLVSGYVNSGDLAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNL 340
           FA  S  +  L+ GY+ +G +A  ++ ML+ ++ +   +   +E TY  VV AF      
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTAR-MLEAMRRQDDRNSHPDEVTYTTVVSAF------ 469

Query: 341 KELSSLIVDAQNLESSTDVDGSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYM 400
                                          VN G +D    +L E+   GV      Y 
Sbjct: 470 -------------------------------VNAGLMDRARQVLAEMARMGVPANRITYN 529

Query: 401 PILKAYQKERRTAEATQLIMDVS-SSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRE 460
            +LK Y K+ +   A  L+ +++  +G++ D  +++ +I+  +   D   A A F +MR 
Sbjct: 530 VLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRT 589

Query: 461 TRKSNTNASYLTIMTGLMESHRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLE 520
              + T  SY T+M     S +P+L     DE++ DP V+V    WN ++  +C+ G +E
Sbjct: 590 RGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIE 649

Query: 521 DARRTFRRMKFLQFEPNEQTFLSLINGYVSGERYFCVLMLWNELKWKITANGERG----- 580
           DA+R   RMK   F PN  T+ SL NG     +    L+LW E+K +     +       
Sbjct: 650 DAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSS 709

Query: 581 -------FKLDSNLVDAFLYALVKGGFFDAVMQVVEKTKDTKTFVDKWKYKQAFMETHKK 640
                   K D  L+D      V+  FF   ++++   ++     +K KYK+ ++E H +
Sbjct: 710 SDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSR 762

Query: 641 L------KVAKLRRRNHRKMQSLIDFKNWVGL 654
           +        A++ RR  RK ++   FK W+GL
Sbjct: 770 MFTSKHASQARIDRRVERK-RAAEAFKFWLGL 762

[Close]
BLAST of Carg17311 vs. TAIR10
Match: AT4G17616.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 116.3 bits (290), Expect = 7.0e-26
Identity = 129/629 (20.51%), Postives = 239/629 (38.00%), Query Frame = 0 

Query: 69  LHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRAFASAVFVIE 128
           L  +L     D+AW  FK   +   FP   + N  +  LS       L +A       ++
Sbjct: 61  LETALKDHRVDDAWDVFKDFKRLYGFPESVIMNRFVTVLSYSSDAGWLCKASDLTRLALK 120

Query: 129 KKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFE-------FWGNELVSI 188
           + P +L    +  L  S+  A     A S+++ ML     +  +             +  
Sbjct: 121 QNPGMLSGDVLTKLSLSLARAQMVESACSILRIMLEKGYVLTSDVLRLVVMHMVKTEIGT 180

Query: 189 CRQSGSLIPFLRVFEEICRIVLNERLDS----MKPDLNACNAALEGCCHELESVTDAEHV 248
           C  S  L+   +V +      + +R  S    +KPD    N  L G C         + +
Sbjct: 181 CLASNYLV---QVCDRFVEFNVGKRNSSPGNVVKPDTVLFNLVL-GSCVRFGFSLKGQEL 240

Query: 249 VETMSLLNLRPDEVTFGTLAYLYALKGLEQKIIELKRLMGSFG---FASKSLFFNNLVSG 308
           +E M+ +++  D  +   ++ +Y + G+  ++ + K  +G            FF+NL+S 
Sbjct: 241 IELMAKVDVVADAYSIVIMSCIYEMNGMRDELRKFKEHIGQVPPQLLGHYQHFFDNLLSL 300

Query: 309 YVNSGDLAAVSKTMLDGLKDEC--------------------GEHVR------------- 368
                D+ +  +  LD  K +                       H+R             
Sbjct: 301 EFKFDDIGSAGRLALDMCKSKVLVSVENLGFDSEKPRVLPVGSHHIRSGLKIHISPKLLQ 360

Query: 369 ----------------------FEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESSTDV 428
                                    KT  ++V  + +  NL ELS L+          DV
Sbjct: 361 RDSSLGVDTEATFVNYSNSKLGITNKTLAKLVYGYKRHDNLPELSKLLFSLGGSRLCADV 420

Query: 429 DGSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLI 488
                   I+ACV IGWL+  H IL ++NS G  + L  Y  +L  Y K +    A  L+
Sbjct: 421 --------IDACVAIGWLEAAHDILDDMNSAGYPMELATYRMVLSGYYKSKMLRNAEVLL 480

Query: 489 MDVSSSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMES 548
             ++ +GL  D    + ++      +D ++      ++R+      NA          + 
Sbjct: 481 KQMTKAGLITDPSN-EIVVSPETEEKDSENT-----ELRDLLVQEINAG--------KQM 540

Query: 549 HRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQT 608
             P ++                 ++ NS ++ FCKA    DA  T+R++  ++  P  Q+
Sbjct: 541 KAPSML-----------------YELNSSLYYFCKAKMQGDALITYRKIPKMKIPPTVQS 600

Query: 609 FLSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVM 629
           F  LI+ Y S   Y  + ++W ++K  I +   +  K   +L++  +   ++GG+F+ VM
Sbjct: 601 FWILIDMYSSLGMYREITIVWGDIKRNIAS---KNLKTTQDLLEKLVVNFLRGGYFERVM 643

[Close]
BLAST of Carg17311 vs. Swiss-Prot
Match: sp|P0C7R4|PP110_ARATH (Pentatricopeptide repeat-containing protein At1g69290 OS=Arabidopsis thaliana OX=3702 GN=At1g69290 PE=2 SV=1)

HSP 1 Score: 786.2 bits (2029), Expect = 2.8e-226
Identity = 411/663 (61.99%), Postives = 519/663 (78.28%), Query Frame = 0 

Query: 1   MWKRAVCSIPRRLF-SSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTT 60
           M+++ + SI RR F SS+PE  SLYSFL+PSLF+ K    SPS     L   Q P+ LT 
Sbjct: 1   MFRKTLNSISRRHFSSSSPESPSLYSFLKPSLFSHKPITLSPS-----LSPPQNPKTLTP 60

Query: 61  DRVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGG-----VH 120
           D+ ++ E+TLH SL    TDEAWK+F+ LT +S  P K L NSLI HLS + G      H
Sbjct: 61  DQKSSFESTLHDSLNAHYTDEAWKAFRSLTAASSLPEKRLINSLITHLSGVEGSGESISH 120

Query: 121 NLKRAFASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFW 180
            LKRAFASA +VIEK P LL+F +V+TLL SMK A  A PA++L+KCM +NR FVPF+ W
Sbjct: 121 RLKRAFASAAYVIEKDPILLEFETVRTLLESMKLAKAAGPALALVKCMFKNRYFVPFDLW 180

Query: 181 GNELVSICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDA 240
           G+ ++ ICR++GSL PFL+VF+E CRI ++E+L+ MKPDL A NAALE CC ++ES+ DA
Sbjct: 181 GHLVIDICRENGSLAPFLKVFKESCRISVDEKLEFMKPDLVASNAALEACCRQMESLADA 240

Query: 241 EHVVETMSLLNLRPDEVTFGTLAYLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSG 300
           E+V+E+M++L ++PDE++FG LAYLYA KGL +KI EL+ LM  FGFAS+ + ++N++SG
Sbjct: 241 ENVIESMAVLGVKPDELSFGFLAYLYARKGLREKISELENLMDGFGFASRRILYSNMISG 300

Query: 301 YVNSGDLAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLE 360
           YV SGDL +VS  +L  LK E GE   F  +TY E+VK F++S ++K L+ +I++AQ LE
Sbjct: 301 YVKSGDLDSVSDVILHSLK-EGGEESSFSVETYCELVKGFIESKSVKSLAKVILEAQKLE 360

Query: 361 SS-TDVDGSIGFGIINACVNIGWLDNVHAILKEINSQ-GVSVGLGVYMPILKAYQKERRT 420
           SS   VD S+GFGIINACVN+G+ D  H+IL+E+ +Q G SVG+GVY+PILKAY KE RT
Sbjct: 361 SSYVGVDSSVGFGIINACVNLGFSDKAHSILEEMIAQGGGSVGIGVYVPILKAYCKEYRT 420

Query: 421 AEATQLIMDVSSSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTI 480
           AEATQL+ ++SSSGLQLD E  +ALIEASM+NQDF SAF LFR MRE R  +   SYLTI
Sbjct: 421 AEATQLVTEISSSGLQLDVEISNALIEASMTNQDFISAFTLFRDMRENRVVDLKGSYLTI 480

Query: 481 MTGLMESHRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQ 540
           MTGL+E+ RPELMAAFLDEVVEDP VEV +HDWNSIIHAFCK+GRLEDARRTFRRM FL+
Sbjct: 481 MTGLLENQRPELMAAFLDEVVEDPRVEVNSHDWNSIIHAFCKSGRLEDARRTFRRMVFLR 540

Query: 541 FEPNEQTFLSLINGYVSGERYFCVLMLWNELKWKITA-NGERGFKLDSNLVDAFLYALVK 600
           +EPN QT+LSLINGYVSGE+YF VL+LWNE+K KI++   E+  +LD  LVDAFLYALVK
Sbjct: 541 YEPNNQTYLSLINGYVSGEKYFNVLLLWNEIKGKISSVEAEKRSRLDHALVDAFLYALVK 600

Query: 601 GGFFDAVMQVVEKTKDTKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWV 655
           GGFFDA MQVVEK+++ K FVDKW+YKQAFMETHKKL++ KLR+RN++KM+SL+ FKNW 
Sbjct: 601 GGFFDAAMQVVEKSQEMKIFVDKWRYKQAFMETHKKLRLPKLRKRNYKKMESLVAFKNWA 657

[Close]
BLAST of Carg17311 vs. Swiss-Prot
Match: sp|Q9CAA5|PP109_ARATH (Pentatricopeptide repeat-containing protein At1g68980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g68980 PE=2 SV=1)

HSP 1 Score: 657.5 bits (1695), Expect = 1.5e-187
Identity = 341/623 (54.74%), Postives = 452/623 (72.55%), Query Frame = 0 

Query: 36  RAPFSPSQESTDLRQNQTPQILTTDRVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFP 95
           R PFS     T          LT  + ++ E+TLH SL+T DTD+AWK F+    +S  P
Sbjct: 12  RRPFSSIPSKT----------LTPHQKSSFESTLHHSLITHDTDQAWKVFRSFAAASSLP 71

Query: 96  CKSLTNSLIAHLSSIGGV-------HNLKRAFASAVFVIEKKPELLDFGSVKTLLASMKC 155
            K L NSLI HLSS           H LKRAF S  +VIEK P LL+F +V+T+L SMK 
Sbjct: 72  DKRLLNSLITHLSSFHNTDQNTSLRHRLKRAFVSTTYVIEKDPILLEFETVRTVLESMKL 131

Query: 156 ANTAAPAVSLIKCMLRNRCFVPFEFWGNELVSICRQSGSLIPFLRVFEEICRIVLNERLD 215
           A  + PA++L++CM +NR FVPF+ WG+ L+ +CR++GSL  FL+VF E CRI ++E+LD
Sbjct: 132 AKASGPALALVECMFKNRYFVPFDLWGDLLIDVCRENGSLAAFLKVFRESCRIAVDEKLD 191

Query: 216 SMKPDLNACNAALEGCCHELESVTDAEHVVETMSLLNLRPDEVTFGTLAYLYALKGLEQK 275
            MKPDL A NAALE CC ++ES+ DAE+++E+M +L ++PDE++FG LAYLYA KGL +K
Sbjct: 192 FMKPDLVASNAALEACCRQMESLADAENLIESMDVLGVKPDELSFGFLAYLYARKGLREK 251

Query: 276 IIELKRLMGSFGFASKSLFFNNLVSGYVNSGDLAAVSKTMLDGLKDECGEHVRFEEKTYL 335
           I EL+ LM   GFAS+ + +++++SGYV SGDL + S  +L  LK   GE   F E+TY 
Sbjct: 252 ISELEDLMDGLGFASRRILYSSMISGYVKSGDLDSASDVILCSLKG-VGEASSFSEETYC 311

Query: 336 EVVKAFVQSGNLKELSSLIVDAQNLES-STDVDGSIGFGIINACVNIGWLDNVHAILKEI 395
           E+V+ F++S +++ L+ LI++AQ LES STDV GS+GFGI+NACV +G+  +  +IL E+
Sbjct: 312 ELVRGFIESKSVESLAKLIIEAQKLESMSTDVGGSVGFGIVNACVKLGF--SGKSILDEL 371

Query: 396 NSQGVSVGLGVYMPILKAYQKERRTAEATQLIMDVSSSGLQLDAETFDALIEASMSNQDF 455
           N+QG S G+GVY+PILKAY KE RT+EATQL+ ++SSSGLQLD ET++ +IEASM+  DF
Sbjct: 372 NAQGGSGGIGVYVPILKAYCKEGRTSEATQLVTEISSSGLQLDVETYNTMIEASMTKHDF 431

Query: 456 QSAFALFRKMRETRKSNTNASYLTIMTGLMESHRPELMAAFLDEVVEDPLVEVGTHDWNS 515
            SA  LFR MRETR ++    YLTIMTGL+E+ RPELMA F++EV+EDP VEV +HDWNS
Sbjct: 432 LSALTLFRDMRETRVADLKRCYLTIMTGLLENQRPELMAEFVEEVMEDPRVEVKSHDWNS 491

Query: 516 IIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTFLSLINGYVSGERYFCVLMLWNELKWKI 575
           IIHAFCK+GRL DA+ TFRRM FLQ+EPN QT+LSLINGYVS E+YF V+++W E K   
Sbjct: 492 IIHAFCKSGRLGDAKSTFRRMTFLQYEPNNQTYLSLINGYVSCEKYFEVVVIWKEFK--- 551

Query: 576 TANGERGFKLDSNLVDAFLYALVKGGFFDAVMQVVEKTKDTKTFVDKWKYKQAFMETHKK 635
               ++  KL+  L DAFL ALVKGGFF   +QV+EK ++ K FVDKW+YK  FMET K 
Sbjct: 552 ----DKKAKLEHALADAFLNALVKGGFFGTALQVIEKCQEMKIFVDKWRYKATFMETQKN 611

Query: 636 LKVAKLRRRNHRKMQSLIDFKNW 651
           L++ KLR+R  +K++ L  FKNW
Sbjct: 612 LRLPKLRKRKMKKIEFLDAFKNW 614

[Close]
BLAST of Carg17311 vs. Swiss-Prot
Match: sp|Q9SA60|PPR6_ARATH (Pentatricopeptide repeat-containing protein At1g03100, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g03100 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.0e-34
Identity = 97/337 (28.78%), Postives = 154/337 (45.70%), Query Frame = 0 

Query: 324 EKTYLEVVKAFVQSGNLKELSSLIVDAQNLESSTDVDGSIGFGIINACVNIGWLDNVHAI 383
           E+ Y+++ KAF++SG +KEL+  ++ A++ +S    D S+   +INAC+++G LD  H +
Sbjct: 459 EEIYVKLAKAFLESGKMKELAKFLLKAEHEDSPVSSDNSMLINVINACISLGMLDQAHDL 518

Query: 384 LKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIMDVSSSGLQLDAETFDALIEASMS 443
           L E+   GV                                                   
Sbjct: 519 LDEMRMAGVRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 578

Query: 444 NQDFQSAFALFRKMRETR-KSNTNASYLTIMTGLMESHRPELMAAFLDEVVEDPLVEVGT 503
                                  N  +  ++ G   +    LM+  L E+ E   ++ G 
Sbjct: 579 XXXXXXXXXXXXXXXXXXILRGGNQKFEKLLKGCEGNAEAGLMSKLLREIREVQSLDAGV 638

Query: 504 HDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTFLSLINGYVS-GERYFCVLMLWN 563
           HDWN++IH F K G ++DA +  +RM+ L   PN QTF S++ GY + G +Y  V  LW 
Sbjct: 639 HDWNNVIHFFSKKGLMQDAEKALKRMRSLGHSPNAQTFHSMVTGYAAIGSKYTEVTELWG 698

Query: 564 ELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVMQVVEKTKDTKTFVDKWKYKQAF 623
           E+  K  A      K D  L+DA LY  V+GGFF    +VVE  +    FVDK+KY+  F
Sbjct: 699 EM--KSIAAATSSMKFDQELLDAVLYTFVRGGFFSRANEVVEMMEKKNMFVDKYKYRMLF 758

Query: 624 METHK---KLKVAKLRRRNH-RKMQSLIDFKNWVGLN 655
           ++ HK   K K  K++  +  +K ++ + FK W+GL+
Sbjct: 759 LKYHKTAYKGKAPKVQSESQLKKREAGLVFKKWLGLS 793

[Close]
BLAST of Carg17311 vs. Swiss-Prot
Match: sp|Q9SF38|PP222_ARATH (Pentatricopeptide repeat-containing protein At3g09650, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HCF152 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.4e-31
Identity = 102/392 (26.02%), Postives = 173/392 (44.13%), Query Frame = 0 

Query: 281 FASKSLFFNNLVSGYVNSGDLAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNL 340
           FA  S  +  L+ GY+ +G +A  ++ ML+ ++ +   +   +E TY  VV AF      
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTAR-MLEAMRRQDDRNSHPDEVTYTTVVSAF------ 469

Query: 341 KELSSLIVDAQNLESSTDVDGSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYM 400
                                          VN G +D    +L E+   GV      Y 
Sbjct: 470 -------------------------------VNAGLMDRARQVLAEMARMGVPANRITYN 529

Query: 401 PILKAYQKERRTAEATQLIMDVS-SSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRE 460
            +LK Y K+ +   A  L+ +++  +G++ D  +++ +I+  +   D   A A F +MR 
Sbjct: 530 VLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRT 589

Query: 461 TRKSNTNASYLTIMTGLMESHRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLE 520
              + T  SY T+M     S +P+L     DE++ DP V+V    WN ++  +C+ G +E
Sbjct: 590 RGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIE 649

Query: 521 DARRTFRRMKFLQFEPNEQTFLSLINGYVSGERYFCVLMLWNELKWKITANGERG----- 580
           DA+R   RMK   F PN  T+ SL NG     +    L+LW E+K +     +       
Sbjct: 650 DAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSS 709

Query: 581 -------FKLDSNLVDAFLYALVKGGFFDAVMQVVEKTKDTKTFVDKWKYKQAFMETHKK 640
                   K D  L+D      V+  FF   ++++   ++     +K KYK+ ++E H +
Sbjct: 710 SDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSR 762

Query: 641 L------KVAKLRRRNHRKMQSLIDFKNWVGL 654
           +        A++ RR  RK ++   FK W+GL
Sbjct: 770 MFTSKHASQARIDRRVERK-RAAEAFKFWLGL 762

[Close]
BLAST of Carg17311 vs. Swiss-Prot
Match: sp|B3H672|PP317_ARATH (Pentatricopeptide repeat-containing protein At4g17616 OS=Arabidopsis thaliana OX=3702 GN=At4g17616 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.3e-24
Identity = 129/629 (20.51%), Postives = 239/629 (38.00%), Query Frame = 0 

Query: 69  LHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRAFASAVFVIE 128
           L  +L     D+AW  FK   +   FP   + N  +  LS       L +A       ++
Sbjct: 61  LETALKDHRVDDAWDVFKDFKRLYGFPESVIMNRFVTVLSYSSDAGWLCKASDLTRLALK 120

Query: 129 KKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFE-------FWGNELVSI 188
           + P +L    +  L  S+  A     A S+++ ML     +  +             +  
Sbjct: 121 QNPGMLSGDVLTKLSLSLARAQMVESACSILRIMLEKGYVLTSDVLRLVVMHMVKTEIGT 180

Query: 189 CRQSGSLIPFLRVFEEICRIVLNERLDS----MKPDLNACNAALEGCCHELESVTDAEHV 248
           C  S  L+   +V +      + +R  S    +KPD    N  L G C         + +
Sbjct: 181 CLASNYLV---QVCDRFVEFNVGKRNSSPGNVVKPDTVLFNLVL-GSCVRFGFSLKGQEL 240

Query: 249 VETMSLLNLRPDEVTFGTLAYLYALKGLEQKIIELKRLMGSFG---FASKSLFFNNLVSG 308
           +E M+ +++  D  +   ++ +Y + G+  ++ + K  +G            FF+NL+S 
Sbjct: 241 IELMAKVDVVADAYSIVIMSCIYEMNGMRDELRKFKEHIGQVPPQLLGHYQHFFDNLLSL 300

Query: 309 YVNSGDLAAVSKTMLDGLKDEC--------------------GEHVR------------- 368
                D+ +  +  LD  K +                       H+R             
Sbjct: 301 EFKFDDIGSAGRLALDMCKSKVLVSVENLGFDSEKPRVLPVGSHHIRSGLKIHISPKLLQ 360

Query: 369 ----------------------FEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESSTDV 428
                                    KT  ++V  + +  NL ELS L+          DV
Sbjct: 361 RDSSLGVDTEATFVNYSNSKLGITNKTLAKLVYGYKRHDNLPELSKLLFSLGGSRLCADV 420

Query: 429 DGSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLI 488
                   I+ACV IGWL+  H IL ++NS G  + L  Y  +L  Y K +    A  L+
Sbjct: 421 --------IDACVAIGWLEAAHDILDDMNSAGYPMELATYRMVLSGYYKSKMLRNAEVLL 480

Query: 489 MDVSSSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMES 548
             ++ +GL  D    + ++      +D ++      ++R+      NA          + 
Sbjct: 481 KQMTKAGLITDPSN-EIVVSPETEEKDSENT-----ELRDLLVQEINAG--------KQM 540

Query: 549 HRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQT 608
             P ++                 ++ NS ++ FCKA    DA  T+R++  ++  P  Q+
Sbjct: 541 KAPSML-----------------YELNSSLYYFCKAKMQGDALITYRKIPKMKIPPTVQS 600

Query: 609 FLSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVM 629
           F  LI+ Y S   Y  + ++W ++K  I +   +  K   +L++  +   ++GG+F+ VM
Sbjct: 601 FWILIDMYSSLGMYREITIVWGDIKRNIAS---KNLKTTQDLLEKLVVNFLRGGYFERVM 643

[Close]
BLAST of Carg17311 vs. TrEMBL
Match: tr|A0A1S3BF23|A0A1S3BF23_CUCME (pentatricopeptide repeat-containing protein At1g69290 OS=Cucumis melo OX=3656 GN=LOC103489182 PE=4 SV=1)

HSP 1 Score: 1106.7 bits (2861), Expect = 0.0e+00
Identity = 553/655 (84.43%), Postives = 594/655 (90.69%), Query Frame = 0 

Query: 1   MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTTD 60
           MWKR +C IP R FSS PE  SLYSFLQPSLFA KR PFSPSQ+STDLRQ+ TPQ LT D
Sbjct: 1   MWKRVLCLIPHRSFSSVPETPSLYSFLQPSLFAKKRTPFSPSQDSTDLRQDPTPQTLTPD 60

Query: 61  RVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRAF 120
           RVAAVET LHKSLLTSDTDEAWKSFKLLT+SS+FP KSLTNSLIAHLSSIG VHNLKRAF
Sbjct: 61  RVAAVETALHKSLLTSDTDEAWKSFKLLTRSSIFPSKSLTNSLIAHLSSIGDVHNLKRAF 120

Query: 121 ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELVS 180
           AS VFVIEKKPELLDFGSVK LLASMKCANTAAPA+SLIKCM +NRCFVPF  WG ELV 
Sbjct: 121 ASVVFVIEKKPELLDFGSVKALLASMKCANTAAPALSLIKCMFKNRCFVPFSVWGKELVD 180

Query: 181 ICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVET 240
           ICRQSGSLIPFLRVFEE CRI L+ERLD +KPDL ACNAALEGCCHELESVTDAE VVET
Sbjct: 181 ICRQSGSLIPFLRVFEENCRIALDERLDFLKPDLIACNAALEGCCHELESVTDAEKVVET 240

Query: 241 MSLLNLRPDEVTFGTLAYLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSGD 300
           MSLL LRPDEV+FG LAYLYALKGLEQKIIEL+ LMGSFGF  K L F+NLVSGYVN+ +
Sbjct: 241 MSLLYLRPDEVSFGALAYLYALKGLEQKIIELEVLMGSFGFTRKDLLFSNLVSGYVNASN 300

Query: 301 LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESSTDVD 360
            AAVSKTML  LKDECG HV F EKTYLE+VK F+QSGNLKELS+LI+DAQNLESS+ VD
Sbjct: 301 FAAVSKTMLRSLKDECGSHVHFGEKTYLEMVKGFIQSGNLKELSALIIDAQNLESSSAVD 360

Query: 361 GSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLIM 420
           GSIG+GIINACVNIGWLD    +L EINSQGVS+GLGVYMPILKAY+ ERRT EATQL+M
Sbjct: 361 GSIGYGIINACVNIGWLDKAQYVLNEINSQGVSLGLGVYMPILKAYRTERRTTEATQLVM 420

Query: 421 DVSSSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMESH 480
           D+++SG+QLDAE++D+LIEASMSNQDFQSAF LFR MRETRKS+T ASYLTIMTGLME+H
Sbjct: 421 DITNSGIQLDAESYDSLIEASMSNQDFQSAFTLFRNMRETRKSDTKASYLTIMTGLMENH 480

Query: 481 RPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQTF 540
           RPELMAAFLDE+VEDPLVEVGTHDWNSIIHAFCKAGRLEDARRT+RRMKFLQFEPNEQTF
Sbjct: 481 RPELMAAFLDEIVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTYRRMKFLQFEPNEQTF 540

Query: 541 LSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVMQ 600
           LSLINGYVS ERYFCVLMLWNELKWK+T +GE G KLD+NLVDAFLYALVKGGFFDAVMQ
Sbjct: 541 LSLINGYVSAERYFCVLMLWNELKWKVTPDGESGIKLDNNLVDAFLYALVKGGFFDAVMQ 600

Query: 601 VVEKTKDTKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 656
           VVEKTKDTK F+DKWKYKQAFME HKKLKVAKLRRRNHRKM+SLI FKNW GL+A
Sbjct: 601 VVEKTKDTKIFIDKWKYKQAFMENHKKLKVAKLRRRNHRKMESLIAFKNWAGLSA 655

[Close]
BLAST of Carg17311 vs. TrEMBL
Match: tr|A0A0A0KSW9|A0A0A0KSW9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606690 PE=4 SV=1)

HSP 1 Score: 1099.7 bits (2843), Expect = 0.0e+00
Identity = 555/656 (84.60%), Postives = 592/656 (90.24%), Query Frame = 0 

Query: 1   MWKRAVCSIPRRLFSSTPE-VSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTT 60
           MWKR +C IP R FSS PE   SLYSFLQPSLFA KR PFSPSQ+STDLRQ+ TPQ LT 
Sbjct: 1   MWKRVLCLIPHRSFSSVPENPPSLYSFLQPSLFARKRTPFSPSQDSTDLRQDPTPQNLTP 60

Query: 61  DRVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRA 120
           D VA VET LHKSLLTSDTDEAWKSFKLLT+SS FP KSLTNSLIAHLSSIG VHNLKRA
Sbjct: 61  DGVAVVETALHKSLLTSDTDEAWKSFKLLTRSSAFPSKSLTNSLIAHLSSIGDVHNLKRA 120

Query: 121 FASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELV 180
           FAS VFVIEKKPELLDFGSVK LLASMKCANTAAPA+SLIKCM +NRCFVPF  WG ELV
Sbjct: 121 FASVVFVIEKKPELLDFGSVKALLASMKCANTAAPALSLIKCMFKNRCFVPFSVWGKELV 180

Query: 181 SICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVE 240
            ICRQSGSLIPFLRVFEE CRI L+ERLD +KPDL ACNAALEGCCHELESVTDAE V+E
Sbjct: 181 DICRQSGSLIPFLRVFEENCRIALDERLDFLKPDLIACNAALEGCCHELESVTDAEKVIE 240

Query: 241 TMSLLNLRPDEVTFGTLAYLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSG 300
           TMSLL LRPDEV+FG LAYLYALKGL+QKIIEL+ LMGSFGF  K LFF+NLVSGYVN+ 
Sbjct: 241 TMSLLYLRPDEVSFGALAYLYALKGLDQKIIELEVLMGSFGFTCKDLFFSNLVSGYVNAS 300

Query: 301 DLAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESSTDV 360
           + AAVSKTML  LKDECG HV F EKTYLE+VK F+QSGNLKELS+LI+DAQNLESS+ V
Sbjct: 301 NFAAVSKTMLRSLKDECGSHVHFGEKTYLEMVKGFIQSGNLKELSALIIDAQNLESSSAV 360

Query: 361 DGSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLI 420
           DGSIGFGIINACVNIGWLD    IL E+NSQGVS+GLGVY+PILKAY+KE RTA ATQLI
Sbjct: 361 DGSIGFGIINACVNIGWLDKAQYILDEMNSQGVSLGLGVYLPILKAYRKEHRTAAATQLI 420

Query: 421 MDVSSSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMES 480
           MD+SSSG+QLDAE +DALIEASMSNQDFQSAF LFR MRETRKS+T ASYLTIMTGLME+
Sbjct: 421 MDISSSGIQLDAENYDALIEASMSNQDFQSAFTLFRSMRETRKSDTKASYLTIMTGLMEN 480

Query: 481 HRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQT 540
           HRPELMAAFLDE+VEDPLVEVGTHDWNSIIHAFCKAGRLEDARRT+RRMKFLQFEPNEQT
Sbjct: 481 HRPELMAAFLDEIVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTYRRMKFLQFEPNEQT 540

Query: 541 FLSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVM 600
           FLSLINGYVS ERYFCVLMLWNELKWK+T NGE G KLD+NLVDAFLYALVKGGFFDAVM
Sbjct: 541 FLSLINGYVSAERYFCVLMLWNELKWKVTPNGESGIKLDNNLVDAFLYALVKGGFFDAVM 600

Query: 601 QVVEKTKDTKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 656
           QVVEKTKDTK F+DKWKYKQAFMETHKKLKVAKLRRRN++KM+SLI FKNW GLNA
Sbjct: 601 QVVEKTKDTKIFIDKWKYKQAFMETHKKLKVAKLRRRNYKKMESLIAFKNWAGLNA 656

[Close]
BLAST of Carg17311 vs. TrEMBL
Match: tr|A0A2I4H895|A0A2I4H895_9ROSI (pentatricopeptide repeat-containing protein At1g69290 OS=Juglans regia OX=51240 GN=LOC109014373 PE=4 SV=1)

HSP 1 Score: 894.4 bits (2310), Expect = 1.5e-256
Identity = 451/655 (68.85%), Postives = 547/655 (83.51%), Query Frame = 0 

Query: 1   MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTTD 60
           M +R +  +PRR FSSTPEV SLYSFLQPS+FA K+ P  P   S D    Q P+ LT D
Sbjct: 1   MLRRPLSFLPRRPFSSTPEVPSLYSFLQPSIFALKKTPSPPPPTSPD----QPPRALTPD 60

Query: 61  RVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRAF 120
            +A +ETTLH+SLLTS+TDEAWKSFK LT ++VFP KSLTNSL+ HLSS+  +HNLKRAF
Sbjct: 61  HIATLETTLHQSLLTSNTDEAWKSFKALTSNTVFPSKSLTNSLVTHLSSLNDIHNLKRAF 120

Query: 121 ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELVS 180
           AS V++IEKKP+LLDF ++  LL++MKCANTAAPA +LIKCML+NR FVPF  WG+ LV 
Sbjct: 121 ASVVYLIEKKPKLLDFETLGNLLSAMKCANTAAPAFALIKCMLKNRYFVPFGLWGSALVE 180

Query: 181 ICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVET 240
           I R++G+ + FLRVFEE CRI L+E+LD MKPDL ACNAALEGCC ELESV+DAE+VVET
Sbjct: 181 ISRKNGNFVAFLRVFEENCRIALDEKLDFMKPDLPACNAALEGCCRELESVSDAENVVET 240

Query: 241 MSLLNLRPDEVTFGTLAYLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSGD 300
           MS+L +RPDE +FG+LAYLYALKGL +KIIEL+ LM  FGF++KS FF NLVSGY+ SG+
Sbjct: 241 MSILGIRPDESSFGSLAYLYALKGLGEKIIELEGLMDGFGFSNKSAFFINLVSGYIKSGN 300

Query: 301 LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLE-SSTDV 360
           L +VS T+L      C E  +F E+TY EVV  F+ +G++K L++LI++AQ LE SS  V
Sbjct: 301 LESVSATIL-----HCCEDSKFGEETYREVVNGFLNNGSVKSLATLIIEAQKLEPSSVLV 360

Query: 361 DGSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLI 420
           D S+G+GI+NACVN+G  D  H+IL+E+++QG SVGLGVY+PILKAY+KE RTAEATQL+
Sbjct: 361 DRSVGYGIVNACVNLGLSDKAHSILEEMDAQGGSVGLGVYVPILKAYRKEHRTAEATQLV 420

Query: 421 MDVSSSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMES 480
           M++++SG+QLD ET+D+LIEASMS+QDFQSAF+LFR MRE R  +   SYLTIMTGLME+
Sbjct: 421 MEITNSGIQLDVETYDSLIEASMSSQDFQSAFSLFRDMREARIPDLKGSYLTIMTGLMEN 480

Query: 481 HRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQT 540
           HRPELMAAFLDEVVEDP +EV THDWNSIIHAFCKAGRLEDARRTFRRM FLQFEPN+QT
Sbjct: 481 HRPELMAAFLDEVVEDPRIEVATHDWNSIIHAFCKAGRLEDARRTFRRMIFLQFEPNDQT 540

Query: 541 FLSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVM 600
           +LS INGYV+ E+YF VLMLWNE+K K++ +G++G K D NLVDAFLYALVKGGFFDAVM
Sbjct: 541 YLSQINGYVTTEKYFSVLMLWNEVKRKVSNDGQKGVKFDHNLVDAFLYALVKGGFFDAVM 600

Query: 601 QVVEKTKDTKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLN 655
           QVVEKT++ K FVDKW+YKQAFMETHKKLKVAKLR+RN RKM++L+ FKNW GLN
Sbjct: 601 QVVEKTQEMKIFVDKWRYKQAFMETHKKLKVAKLRKRNFRKMEALVAFKNWAGLN 646

[Close]
BLAST of Carg17311 vs. TrEMBL
Match: tr|M5XK61|M5XK61_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G286800 PE=4 SV=1)

HSP 1 Score: 882.1 bits (2278), Expect = 7.7e-253
Identity = 443/656 (67.53%), Postives = 541/656 (82.47%), Query Frame = 0 

Query: 1   MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTTD 60
           MW++A+  +P R FSSTPE+ +LYSFLQPS+FA KR    PSQ+S        P+ L  D
Sbjct: 1   MWRKALTLLPHRPFSSTPEIPTLYSFLQPSVFALKR-DLPPSQKSHSDLPTPPPKTLAPD 60

Query: 61  RVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRAF 120
            +  +E TLHKSL+T +TDEAWKSFK LT SS FP KSLTNSLI HLSS+G +HNLKRAF
Sbjct: 61  HITTLEATLHKSLITHNTDEAWKSFKTLTGSSAFPSKSLTNSLITHLSSLGDIHNLKRAF 120

Query: 121 ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELVS 180
           A+ V+V+EK P  LDF +V TLL +MKCANTAAPA +LIK + +NR F+PF  WGN L+ 
Sbjct: 121 ATVVYVVEKNPGFLDFETVGTLLDAMKCANTAAPAFALIKSVFKNRFFLPFSVWGNVLIE 180

Query: 181 ICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVET 240
           I R++G+ + FLRVFEE CRI L+E+L+SMKPDL ACNAALEGCC ELESV+DAE VVET
Sbjct: 181 ISRKNGNFVAFLRVFEENCRIALDEKLESMKPDLAACNAALEGCCRELESVSDAEKVVET 240

Query: 241 MSLLNLRPDEVTFGTLAYLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSGD 300
           M++L +RPDE +FG LAYLYALKGLE+KI EL+ LMG FGF++K +F +NL++GYV SG 
Sbjct: 241 MAVLGVRPDESSFGFLAYLYALKGLEEKITELEGLMGGFGFSNKRVFQSNLINGYVKSGK 300

Query: 301 LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESST-DV 360
           L +VS T+L  L++  G+ +   E+TY EVVK ++ S ++KEL++LI++AQ LESST  V
Sbjct: 301 LESVSATILRILREGDGDFLNLGEETYCEVVKGYLMSASVKELATLIIEAQKLESSTVVV 360

Query: 361 DGSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLI 420
           D S+G+GI+NACV+IG  D  H IL E+N+QG S+GLGVY+PILKAY KE RTAEATQL+
Sbjct: 361 DRSVGYGIVNACVHIGLSDKAHGILDEMNAQGGSLGLGVYVPILKAYCKEHRTAEATQLV 420

Query: 421 MDVSSSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMES 480
           MDVS+SGLQLD  T+DALIE+SMS+QDFQSAF+L+R MRE R S+   SYLTIMTGLME+
Sbjct: 421 MDVSNSGLQLDTGTYDALIESSMSSQDFQSAFSLYRDMREARISDLKGSYLTIMTGLMEN 480

Query: 481 HRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQT 540
           HRPELMAAFLDEVVEDP +EVGTHDWNSIIHAFCKAGRLEDARRTFRRM FLQ +PNEQT
Sbjct: 481 HRPELMAAFLDEVVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMIFLQHKPNEQT 540

Query: 541 FLSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVM 600
           +LSLI+GYVS E+YFCVLMLW+E+K  ++ +GE+G K D N+VDAFLYALVKGGFFDAVM
Sbjct: 541 YLSLISGYVSVEKYFCVLMLWHEVKRNVSVDGEKGIKFDHNMVDAFLYALVKGGFFDAVM 600

Query: 601 QVVEKTKDTKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 656
           QVVEK+++ K FVDKW+YKQAFMETHKKLKV+KLR+RN RKM++L+ FKNW GLNA
Sbjct: 601 QVVEKSQEMKVFVDKWRYKQAFMETHKKLKVSKLRKRNFRKMEALVAFKNWAGLNA 655

[Close]
BLAST of Carg17311 vs. TrEMBL
Match: tr|A0A2P6R2Q5|A0A2P6R2Q5_ROSCH (Putative pentatricopeptide OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0438351 PE=4 SV=1)

HSP 1 Score: 875.9 bits (2262), Expect = 5.5e-251
Identity = 441/656 (67.23%), Postives = 541/656 (82.47%), Query Frame = 0 

Query: 1   MWKRAVCSIPRRLFSSTPEVSSLYSFLQPSLFAPKRAPFSPSQESTDLRQNQTPQILTTD 60
           MW++A   + RR FSS+PE+ +LYSFLQPS+FA K  P S S  S DL     P+ LT D
Sbjct: 1   MWRKAFTLLQRRPFSSSPEIPTLYSFLQPSIFALKNPPSSSSSHS-DL-PTSPPKTLTPD 60

Query: 61  RVAAVETTLHKSLLTSDTDEAWKSFKLLTKSSVFPCKSLTNSLIAHLSSIGGVHNLKRAF 120
            V  ++TTLHKSLLT +TDEAWKSFK LT SSVFP KSLTNSLI HL+S+G +HNLKRAF
Sbjct: 61  HVTTLQTTLHKSLLTHNTDEAWKSFKSLTGSSVFPSKSLTNSLITHLASLGDIHNLKRAF 120

Query: 121 ASAVFVIEKKPELLDFGSVKTLLASMKCANTAAPAVSLIKCMLRNRCFVPFEFWGNELVS 180
           AS V+V+EK PELL+F +V ++L +MKCANTAAPA +LI+CM +NR F+PF  WG+ +V 
Sbjct: 121 ASVVYVVEKSPELLEFETVGSVLGAMKCANTAAPAFALIQCMFKNRFFLPFSVWGSVVVE 180

Query: 181 ICRQSGSLIPFLRVFEEICRIVLNERLDSMKPDLNACNAALEGCCHELESVTDAEHVVET 240
           I R++G+   FLRVFEE CR+ L+E+++ MKPDL ACNAALEGCC ELESV+ AE VVET
Sbjct: 181 ISRKNGNFAAFLRVFEENCRVALDEKMEFMKPDLAACNAALEGCCCELESVSGAEKVVET 240

Query: 241 MSLLNLRPDEVTFGTLAYLYALKGLEQKIIELKRLMGSFGFASKSLFFNNLVSGYVNSGD 300
           M++L +RPDE +FG LAYLYALKGL +KI EL+ LMG FGF+ K +F NNL++GYV SG 
Sbjct: 241 MAVLGVRPDESSFGFLAYLYALKGLGEKISELEGLMGGFGFSDKRVFRNNLINGYVKSGK 300

Query: 301 LAAVSKTMLDGLKDECGEHVRFEEKTYLEVVKAFVQSGNLKELSSLIVDAQNLESST-DV 360
           L  VS T+L GL++  GE +  + +TY  VVK F+ +G +KEL++LI++AQNLESST  V
Sbjct: 301 LEFVSATILQGLREGDGECLDLDGETYCRVVKGFLDNGKVKELATLIIEAQNLESSTVVV 360

Query: 361 DGSIGFGIINACVNIGWLDNVHAILKEINSQGVSVGLGVYMPILKAYQKERRTAEATQLI 420
           D S+G+GI+NACV IG  D  H+IL E+N+QG ++GLGV++PILKAY KE RTAEATQL+
Sbjct: 361 DRSVGYGIVNACVGIGLSDKAHSILDEMNAQGGTLGLGVHVPILKAYCKEHRTAEATQLV 420

Query: 421 MDVSSSGLQLDAETFDALIEASMSNQDFQSAFALFRKMRETRKSNTNASYLTIMTGLMES 480
           MD+S+SGL+LD ET+D LIEASMS+QDFQSAF+LFR MRE R  +   SYLTIMTGLME+
Sbjct: 421 MDISNSGLKLDMETYDTLIEASMSSQDFQSAFSLFRDMREARTPDLKGSYLTIMTGLMEN 480

Query: 481 HRPELMAAFLDEVVEDPLVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMKFLQFEPNEQT 540
           HRPELMAAFLDEVVEDP +EVGTHDWNSIIHAFCKAGRLEDARRTFRRM FLQ++PN+QT
Sbjct: 481 HRPELMAAFLDEVVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMIFLQYKPNDQT 540

Query: 541 FLSLINGYVSGERYFCVLMLWNELKWKITANGERGFKLDSNLVDAFLYALVKGGFFDAVM 600
           +LSLI+GYVS E+YFCVLMLW+E+K  I+ +GERG K D N+VDAFLYALVKGGFFDAVM
Sbjct: 541 YLSLISGYVSVEKYFCVLMLWHEVKRNISVDGERGLKFDHNMVDAFLYALVKGGFFDAVM 600

Query: 601 QVVEKTKDTKTFVDKWKYKQAFMETHKKLKVAKLRRRNHRKMQSLIDFKNWVGLNA 656
           QVVEK+++ K FVDKW+YKQAFMETHKKLKV+KLR+R+ RKM++L+ FKNW GLNA
Sbjct: 601 QVVEKSQEMKIFVDKWRYKQAFMETHKKLKVSKLRKRSFRKMEALVAFKNWAGLNA 654

The following BLAST results are available for this feature:
BLAST of Carg17311 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022945947.10.0e+0099.24pentatricopeptide repeat-containing protein At1g69290 [Cucurbita moschata][more]
XP_023541058.10.0e+0099.08pentatricopeptide repeat-containing protein At1g69290 [Cucurbita pepo subsp. pep... [more]
XP_022968525.10.0e+0097.40pentatricopeptide repeat-containing protein At1g69290 [Cucurbita maxima][more]
XP_022149103.10.0e+0086.11pentatricopeptide repeat-containing protein At1g69290 [Momordica charantia][more]
XP_008446433.10.0e+0084.43PREDICTED: pentatricopeptide repeat-containing protein At1g69290 [Cucumis melo][more]
BLAST of Carg17311 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G69290.11.6e-22761.99Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G68980.18.5e-18954.74Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G03100.15.7e-3628.78Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G09650.17.8e-3326.02Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G17616.17.0e-2620.51Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Carg17311 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P0C7R4|PP110_ARATH2.8e-22661.99Pentatricopeptide repeat-containing protein At1g69290 OS=Arabidopsis thaliana OX... [more]
sp|Q9CAA5|PP109_ARATH1.5e-18754.74Pentatricopeptide repeat-containing protein At1g68980, mitochondrial OS=Arabidop... [more]
sp|Q9SA60|PPR6_ARATH1.0e-3428.78Pentatricopeptide repeat-containing protein At1g03100, mitochondrial OS=Arabidop... [more]
sp|Q9SF38|PP222_ARATH1.4e-3126.02Pentatricopeptide repeat-containing protein At3g09650, chloroplastic OS=Arabidop... [more]
sp|B3H672|PP317_ARATH1.3e-2420.51Pentatricopeptide repeat-containing protein At4g17616 OS=Arabidopsis thaliana OX... [more]
BLAST of Carg17311 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BF23|A0A1S3BF23_CUCME0.0e+0084.43pentatricopeptide repeat-containing protein At1g69290 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A0A0KSW9|A0A0A0KSW9_CUCSA0.0e+0084.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606690 PE=4 SV=1[more]
tr|A0A2I4H895|A0A2I4H895_9ROSI1.5e-25668.85pentatricopeptide repeat-containing protein At1g69290 OS=Juglans regia OX=51240 ... [more]
tr|M5XK61|M5XK61_PRUPE7.7e-25367.53Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G286800 PE=4 SV=1[more]
tr|A0A2P6R2Q5|A0A2P6R2Q5_ROSCH5.5e-25167.23Putative pentatricopeptide OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0438351 P... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17311-RACarg17311-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 463..630
e-value: 3.4E-17
score: 64.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 366..462
e-value: 4.1E-13
score: 51.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 155..362
e-value: 1.2E-15
score: 59.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 505..548
e-value: 7.1E-12
score: 45.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 505..537
e-value: 2.8E-8
score: 31.5
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 418..470
e-value: 1.4E-4
score: 21.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 284..315
score: 5.338
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 323..357
score: 5.283
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 360..394
score: 5.733
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 430..460
score: 8.046
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 249..283
score: 6.566
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 465..499
score: 5.557
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 578..612
score: 5.36
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 395..429
score: 6.818
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 501..535
score: 11.915
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 536..566
score: 5.667
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 213..248
score: 7.837
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 9..651
NoneNo IPR availablePANTHERPTHR24015:SF304SUBFAMILY NOT NAMEDcoord: 9..651

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg17311Cla000389Watermelon (97103) v1carwmB0097
Carg17311Csa5G606690Cucumber (Chinese Long) v2carcuB0108
Carg17311MELO3C012153Melon (DHL92) v3.5.1carmeB0101
Carg17311ClCG05G023710Watermelon (Charleston Gray)carwcgB0099
Carg17311CSPI05G24310Wild cucumber (PI 183967)carcpiB0113
Carg17311Cucsa.284500Cucumber (Gy14) v1carcgyB0122
Carg17311CmaCh18G011050Cucurbita maxima (Rimu)carcmaB0131
Carg17311CmoCh18G011260Cucurbita moschata (Rifu)carcmoB0140
Carg17311Lsi04G003620Bottle gourd (USVL1VR-Ls)carlsiB091
Carg17311Cp4.1LG09g02090Cucurbita pepo (Zucchini)carcpeB0146
Carg17311CsGy5G023840Cucumber (Gy14) v2carcgybB0108
Carg17311MELO3C012153.2Melon (DHL92) v3.6.1carmedB0103
Carg17311CsaV3_5G033320Cucumber (Chinese Long) v3carcucB0117
Carg17311Cla97C05G105680Watermelon (97103) v2carwmbB0100
Carg17311Bhi07G001222Wax gourdcarwgoB0115
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg17311Silver-seed gourdcarcarB114
Carg17311Silver-seed gourdcarcarB110
Carg17311Silver-seed gourdcarcarB112
Carg17311Cucumber (Gy14) v2carcgybB0106
Carg17311Cucumber (Gy14) v1carcgyB0118
Carg17311Cucumber (Gy14) v1carcgyB0120
Carg17311Cucurbita maxima (Rimu)carcmaB0133
Carg17311Cucurbita moschata (Rifu)carcmoB0142
Carg17311Cucurbita pepo (Zucchini)carcpeB0148
Carg17311Wild cucumber (PI 183967)carcpiB0111
Carg17311Cucumber (Chinese Long) v2carcuB0106
Carg17311Cucumber (Chinese Long) v3carcucB0115
Carg17311Bottle gourd (USVL1VR-Ls)carlsiB089
Carg17311Bottle gourd (USVL1VR-Ls)carlsiB093
Carg17311Melon (DHL92) v3.5.1carmeB0102
Carg17311Melon (DHL92) v3.5.1carmeB0103
Carg17311Melon (DHL92) v3.6.1carmedB0104
Carg17311Melon (DHL92) v3.6.1carmedB0105
Carg17311Watermelon (Charleston Gray)carwcgB0098
Carg17311Watermelon (Charleston Gray)carwcgB0101
Carg17311Watermelon (97103) v1carwmB0096
Carg17311Watermelon (97103) v1carwmB0099
Carg17311Watermelon (97103) v2carwmbB0099
Carg17311Watermelon (97103) v2carwmbB0102
Carg17311Watermelon (97103) v2carwmbB0103
Carg17311Wax gourdcarwgoB0114