CmoCh18G008790 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh18G008790
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(S-ribonuclease) (S7-RNase)
LocationCmo_Chr18 : 10060506 .. 10061366 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGAGGTGCATATCCTTCCACACTATAAGTATGGATGGGTTGCTGCCATGTTCATCACCCCATCTCCCTCTCCTTCTTTCTCTACTTCTTCTGCTATGGCCTTCATTTCCTCCAATCTTCTCCCCATTTGCATCTCACTCCTTTTGTTTTTCAATTCTGTGTATTCCTTCGACTACTTTCAAATGGTTTTACAATGGCCGCCCGCTACTTGTAAGACTAAAGATGTAGTCTGTTATACTGCACCTCCTAAGATGTTCACCATACATGGTCTCTGGCCTAGTTATTTCTCGGGGGATATGGTTGTTTGTACTTCTAAGCCAAAATTGGACCCAACAAAACAGGTATCTTCTGTGTCATTACAACTCATTAGTGTTTATGATTTGATTTAATTTAATTAGTGCATCCTAAGTGGATTTTTTATTTTTGTTTACAGCTTGCTCCACTCAAAACACAGCTAGAAATGTATTGGCCAGACGTGATAAGCGGCGACCATGAAACATTTTGGAAACACGAATGGGATAAGCACGGTAAATGTTCATTATTTACCCAATATCAATATTTTGAAGTATCTCTCCGTATTCGATTGAACTCTACCTTCAATATAATTAGCCATCTTGAATGCCGCCCATCTTAACCCGGATGTCAACATATCTCTGAATTATCTTGTTGTTGAAAATGCTATTAAGATTGCAATAGGAAAAAGGCCTGCCCTCCACTGCAACAAGGATACATCTAAACAGAAACAATTATTCGAAATTATTTTATGTTTTGATACGGATGCGGTGACTTTGATCGATTGTAGCCCAGAACTTAGAACAAGTTGCATAACTCCTTCCACGATTCACGATGAATTGTAG

mRNA sequence

ATGAGTGAGGTGCATATCCTTCCACACTATAAGTATGGATGGGTTGCTGCCATGTTCATCACCCCATCTCCCTCTCCTTCTTTCTCTACTTCTTCTGCTATGGCCTTCATTTCCTCCAATCTTCTCCCCATTTGCATCTCACTCCTTTTGTTTTTCAATTCTGTGTATTCCTTCGACTACTTTCAAATGGTTTTACAATGGCCGCCCGCTACTTGTAAGACTAAAGATGTAGTCTGTTATACTGCACCTCCTAAGATGTTCACCATACATGGTCTCTGGCCTAGTTATTTCTCGGGGGATATGGTTGTTTGTACTTCTAAGCCAAAATTGGACCCAACAAAACAGCTTGCTCCACTCAAAACACAGCTAGAAATGTATTGGCCAGACGTGATAAGCGGCGACCATGAAACATTTTGGAAACACGAATGGGATAAGCACGCCATCTTGAATGCCGCCCATCTTAACCCGGATGTCAACATATCTCTGAATTATCTTGTTGTTGAAAATGCTATTAAGATTGCAATAGGAAAAAGGCCTGCCCTCCACTGCAACAAGGATACATCTAAACAGAAACAATTATTCGAAATTATTTTATGTTTTGATACGGATGCGGTGACTTTGATCGATTGTAGCCCAGAACTTAGAACAAGTTGCATAACTCCTTCCACGATTCACGATGAATTGTAG

Coding sequence (CDS)

ATGAGTGAGGTGCATATCCTTCCACACTATAAGTATGGATGGGTTGCTGCCATGTTCATCACCCCATCTCCCTCTCCTTCTTTCTCTACTTCTTCTGCTATGGCCTTCATTTCCTCCAATCTTCTCCCCATTTGCATCTCACTCCTTTTGTTTTTCAATTCTGTGTATTCCTTCGACTACTTTCAAATGGTTTTACAATGGCCGCCCGCTACTTGTAAGACTAAAGATGTAGTCTGTTATACTGCACCTCCTAAGATGTTCACCATACATGGTCTCTGGCCTAGTTATTTCTCGGGGGATATGGTTGTTTGTACTTCTAAGCCAAAATTGGACCCAACAAAACAGCTTGCTCCACTCAAAACACAGCTAGAAATGTATTGGCCAGACGTGATAAGCGGCGACCATGAAACATTTTGGAAACACGAATGGGATAAGCACGCCATCTTGAATGCCGCCCATCTTAACCCGGATGTCAACATATCTCTGAATTATCTTGTTGTTGAAAATGCTATTAAGATTGCAATAGGAAAAAGGCCTGCCCTCCACTGCAACAAGGATACATCTAAACAGAAACAATTATTCGAAATTATTTTATGTTTTGATACGGATGCGGTGACTTTGATCGATTGTAGCCCAGAACTTAGAACAAGTTGCATAACTCCTTCCACGATTCACGATGAATTGTAG
Homology
[Close]
BLAST of CmoCh18G008790 vs. Swiss-Prot
Match: RNLE_SOLLC (Extracellular ribonuclease LE OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 1.5e-22
Identity = 70/220 (31.82%), Postives = 100/220 (45.45%), Query Frame = 1 

Query: 29  STSSAMAFISSNLLPICISLLLFFNSVYSFDYFQMVLQWPPATCKTKDVVCYTA---PPK 88
           S S+   F+   ++  C+S+L   N+   FD+F  V QWP + C TK   CY     P  
Sbjct: 3   SNSAFSLFLILLIITQCLSVL---NAAKDFDFFYFVQQWPGSYCDTKQSCCYPTTGKPAA 62

Query: 89  MFTIHGLWPSYFSGDMVVCTSKPKLDPTK-----QLAPLKTQLEMYWPDVI--SGDHETF 148
            F IHGLWP+   G     T     DP       Q++ L + ++  WP +   SG   TF
Sbjct: 63  DFGIHGLWPNNNDG-----TYPSNCDPNSPYDQSQISDLISSMQQNWPTLACPSGSGSTF 122

Query: 149 WKHEWDKH----------------------------AILNAAHLNPDVNISLNYLVVENA 208
           W HEW+KH                            +IL  A ++PD   S + + + NA
Sbjct: 123 WSHEWEKHGTCAESVLTNQHAYFKKALDLKNQIDLLSILQGADIHPDGE-SYDLVNIRNA 182

Query: 209 IKIAIGKRPALHCNKDTSKQKQLFEIILCFDTDAVTLIDC 211
           IK AIG  P + CN D S   QL+++ +C D    +LI+C
Sbjct: 183 IKSAIGYTPWIQCNVDQSGNSQLYQVYICVDGSGSSLIEC 213

[Close]
BLAST of CmoCh18G008790 vs. Swiss-Prot
Match: RNS1_ARATH (Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.9e-21
Identity = 68/210 (32.38%), Postives = 95/210 (45.24%), Query Frame = 1 

Query: 41  LLPIC-ISLLLFFNSVYS-------FDYFQMVLQWPPATCKTKDVVCYT---APPKMFTI 100
           L  +C ISLL+   SV+S       FD+F  V QWP + C T+   CY     P   F I
Sbjct: 5   LASLCLISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGI 64

Query: 101 HGLWPSYFSGDMVVCTSKPKLDPTKQLAPLKTQLEMYWPDVI--SGDHETFWKHEWDKHA 160
           HGLWP+Y  G         K   +  ++ L T ++  WP +   SG  E FW+HEW+KH 
Sbjct: 65  HGLWPNYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHG 124

Query: 161 I---------------------------LNAAHLNPDVNISLNYLVVENAIKIAIGKRPA 211
                                       L  A +NPD   S +   + ++IK +IG  P 
Sbjct: 125 TCSESVIDQHEYFQTALNLKQKTNLLGALTKAGINPDGK-SYSLESIRDSIKESIGFTPW 184

[Close]
BLAST of CmoCh18G008790 vs. Swiss-Prot
Match: RNS3_ARATH (Ribonuclease 3 OS=Arabidopsis thaliana GN=RNS3 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.0e-21
Identity = 62/186 (33.33%), Postives = 83/186 (44.62%), Query Frame = 1 

Query: 58  FDYFQMVLQWPPATCKTKDVVCYTA---PPKMFTIHGLWPSYFSGDMVV-CTSKPKLDPT 117
           FD+F  VLQWP A C ++   CY     P   F IHGLWP+Y +G     C    + D  
Sbjct: 22  FDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLWPNYKTGGWPQNCNPDSRFDDL 81

Query: 118 KQLAPLKTQLEMYWPDVI--SGDHETFWKHEWDKHAI----------------------- 177
           + ++ L + L+  WP +   S D   FW HEW+KH                         
Sbjct: 82  R-VSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESELDQHDYFEAGLKLKQKAN 141

Query: 178 ----LNAAHLNPDVNISLNYLVVENAIKIAIGKRPALHCNKDTSKQKQLFEIILCFDTDA 211
               L  A + PD         +EN IK  +G  P + CNKD+S   QL++I LC DT A
Sbjct: 142 LLHALTNAGIKPDDKF-YEMKDIENTIKQVVGFAPGIECNKDSSHNSQLYQIYLCVDTSA 201

[Close]
BLAST of CmoCh18G008790 vs. Swiss-Prot
Match: RNS2_ANTHI (Ribonuclease S-2 OS=Antirrhinum hispanicum GN=S2 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.7e-11
Identity = 63/205 (30.73%), Postives = 82/205 (40.00%), Query Frame = 1 

Query: 41  LLPICISLLLFFNSVYS--FDYFQMVLQWPPATCKTKDVVC-YTAPPKMFTIHGLWPSYF 100
           LL  CI  L  F S  +  FDYF++VLQWP + C  K   C  T  P  FTIHGLWP   
Sbjct: 14  LLVGCIVHLSNFCSTTTAQFDYFKLVLQWPNSYCSLKTTHCPRTRLPSQFTIHGLWPDNK 73

Query: 101 SGDMVVC--TSKPKLDPTKQLAPLKTQLEMYWPDVISGDH----ETFWKHEWDKHA---- 160
           S  +  C  TS   L  T +   L   L ++WPD+         + FW  +W KH     
Sbjct: 74  SWPLSNCRDTSADVLKITDK--GLIQDLAVHWPDLTRRQRKVPGQKFWVTQWKKHGACAL 133

Query: 161 --------ILNAAHLNPDVNI--------------SLNYLVVENAIKIAIGKRPALHCNK 211
                    + A  L    N+               ++   V  AI    G    L C  
Sbjct: 134 PMYSFNDYFVKALELKKRNNVLDMLSRKSLTPGDQRVDVSDVNGAITKVTGGIAILKC-- 193

[Close]
BLAST of CmoCh18G008790 vs. Swiss-Prot
Match: RNT2_HUMAN (Ribonuclease T2 OS=Homo sapiens GN=RNASET2 PE=1 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-09
Identity = 37/88 (42.05%), Postives = 44/88 (50.00%), Query Frame = 1 

Query: 63  MVLQWPPATCKTKDVVCYTAPPKMFTIHGLWPSYFSGDMVVCT-SKP-KLDPTKQLAPLK 122
           MV  WP   C+     C   PP  +TIHGLWP    G    C  S P  L+  K L P  
Sbjct: 39  MVQHWPETVCEKIQNDCRD-PPDYWTIHGLWPDKSEG----CNRSWPFNLEEIKDLLP-- 98

Query: 123 TQLEMYWPDVISG--DHETFWKHEWDKH 147
            ++  YWPDVI    +   FWKHEW+KH
Sbjct: 99  -EMRAYWPDVIHSFPNRSRFWKHEWEKH 118

[Close]
BLAST of CmoCh18G008790 vs. TrEMBL
Match: A0A0A0LAB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736680 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28
Identity = 79/213 (37.09%), Postives = 107/213 (50.23%), Query Frame = 1 

Query: 37  ISSNLLPICI-SLLLFFNSVYSFDYFQMVLQWPPATCKTKDVVCYTAPPKMFTIHGLWPS 96
           ++ ++  +C+ S LLF N +  FD+FQ+V QW P  C      CY  P  MFTIHGLWPS
Sbjct: 1   MAQHIFILCLLSSLLFVNGI-PFDFFQLVQQWGPNICSPAGSKCYAQPQPMFTIHGLWPS 60

Query: 97  YFSGDMVVCTSKPKLDPTKQLAPLKTQLEMYWPDVISGDHETFWKHEWDKHA-------- 156
            FS   ++C    KL P  ++  L+  L  YWPDVISG +  FW+HEW KHA        
Sbjct: 61  NFSTVPILCPRTKKLFPQGKVTSLEQHLNKYWPDVISGKNSNFWEHEWRKHADCIDPPFT 120

Query: 157 --------ILNAAHLNPDVNISLN----------YLVVENA---IKIAIGKRPALHCN-K 216
                   + +  +   D+   LN           L+ +N    IK A G  P + CN  
Sbjct: 121 IFWYFDISLRHRMNKTYDLLTILNDAGLSHQTHKDLISQNVLDPIKNATGMEPGIRCNIN 180

Query: 217 DTSKQKQLFEIILCFDTDAVTLIDCSPELRTSC 219
             +K+ QL EI+LCF  D  TLIDC   +  +C
Sbjct: 181 GITKKLQLKEIVLCFGNDGTTLIDCPSFVSNTC 212

[Close]
BLAST of CmoCh18G008790 vs. TrEMBL
Match: A0A0A0LAN6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G745530 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24
Identity = 74/210 (35.24%), Postives = 101/210 (48.10%), Query Frame = 1 

Query: 39  SNLLPICISLLLFFNSVYSFDYFQMVLQWPPATCKTKDVV--CYTAPPKMFTIHGLWPSY 98
           S L+   +SL++F N    F++FQ V QW P  C T   V  C+T P   FTIHGLWPS 
Sbjct: 4   SILIIYFLSLVVFVNGGVPFEFFQFVEQWGPNVCNTGARVSPCHTPPQAKFTIHGLWPSN 63

Query: 99  FSGDMVVCTSKPKLDPTKQLAPLKTQLEMYWPDVISGDHETFWKHEWDKH---------- 158
            S   ++C SK       ++  L+ QL + WPD+  G+++ FW HEWD H          
Sbjct: 64  HSNAHLLCQSKTIYS---KVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSL 123

Query: 159 -----------------AILNAAHLNPDVNISLNYLVVENAIKIAIGKRPALHCNKDTSK 218
                             IL AA LNP  + +L    +   I+    K P + CNK+   
Sbjct: 124 FQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLAIQNIMAPIQRTTKKYPGIRCNKNVKT 183

[Close]
BLAST of CmoCh18G008790 vs. TrEMBL
Match: G3C8T8_9ROSA (S-locus associated ribonuclease OS=Prunus speciosa GN=S-RNase PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.7e-24
Identity = 72/214 (33.64%), Postives = 102/214 (47.66%), Query Frame = 1 

Query: 34  MAFISSNLLPICISLLLFF---NSVYSFDYFQMVLQWPPATCKTKDVVCYTAPPKMFTIH 93
           MA + S+   + ++L+LF+    S  S+ YFQ V QWPP TC      CY  PP +FTIH
Sbjct: 1   MAMLKSSPAFLVLALVLFWCFSTSTGSYQYFQFVQQWPPTTCAISKKPCYQNPPSIFTIH 60

Query: 94  GLWPSYFSGDMVVCTSKPKLDPTKQLAPLKTQLEMYWPDVISGDHETFWKHEWDKHAILN 153
           GLWPS +S +  V    P          L+T+L++ WPDV SG++  FW+ EW+KH   +
Sbjct: 61  GLWPSNYSKNAWVANCSPTRFNNSLSPRLETKLKISWPDVESGNYTDFWEREWNKHGTCS 120

Query: 154 AAHLNPD---------------VNI-----------SLNYLVVENAIKIAIGKRPALHCN 212
              L+ +                NI             +Y  + + IK AI K PAL C 
Sbjct: 121 EQTLDQEQYFERSHDIWNAYNITNILKRAKILPTGGKWDYSDIVSPIKTAIRKMPALRCK 180

[Close]
BLAST of CmoCh18G008790 vs. TrEMBL
Match: Q40116_LUFAE (Ribonuclease (RNase LC2) OS=Luffa aegyptiaca PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.7e-24
Identity = 64/201 (31.84%), Postives = 99/201 (49.25%), Query Frame = 1 

Query: 44  ICISLLLFFNSVYSFDYFQMVLQWPPATCKTKDVVCYTAPPKMFTIHGLWPSYFSGDMVV 103
           + +++L       +FD+F  V QWPP TC+ +   C+  PP  F IHGLWP      +V 
Sbjct: 13  LLLTILFLGAESQTFDHFFFVQQWPPTTCQQQQKPCFQPPPATFKIHGLWPQKGPNSVVY 72

Query: 104 CTSKPKLDPTKQLAPLKTQLEMYWPDVISGDHETFWKHEWDKHAILNAAHLNPDV--NIS 163
           C      D T Q++ L+ QL++ WPDV++G++  FW+HEW+KH   + +  N  +    +
Sbjct: 73  CNK--NFDRT-QISSLENQLDVVWPDVVTGNNTGFWEHEWNKHGSCSESQFNQTLYFQTA 132

Query: 164 LNYLVVENAIK------------------------IAIGKRPALHCNKDTSKQKQLFEII 219
           +N +   N +K                           G +P L C K   +Q  L EI+
Sbjct: 133 INMMNKVNLLKALGKGGITSDERTKSSQTMQKVLLAQFGNQPFLRCKK-VGQQFWLLEIV 192

[Close]
BLAST of CmoCh18G008790 vs. TrEMBL
Match: A0A067L9R7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15612 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.8e-23
Identity = 71/193 (36.79%), Postives = 87/193 (45.08%), Query Frame = 1 

Query: 58  FDYFQMVLQWPPATCKTKDVVCYTA---PPKMFTIHGLWPSYFSGDMVVCTSKPKLDPTK 117
           FD+F  V QWP + C T+   CY     P   F IHGLWP+Y  G      +   +    
Sbjct: 26  FDFFYFVQQWPGSYCDTRHSCCYPKTGKPAADFGIHGLWPNYKDGGYPSNCNPDSVFDKS 85

Query: 118 QLAPLKTQLEMYWPDVI--SGDHETFWKHEWDKHA------------------------- 177
           Q++ L ++LE  WP +   SGD   FW HEW KH                          
Sbjct: 86  QISDLVSRLERNWPTLSCPSGDGNKFWSHEWVKHGTCAESELDQHDYFEAALKLKEKVNL 145

Query: 178 --ILNAAHLNPDVNISLNYLVVENAIKIAIGKRPALHCNKDTSKQKQLFEIILCFDTDAV 219
             IL  A + PD         +E AIK AIG  P L CNKD SK  QLF+I LC DT A 
Sbjct: 146 LKILTDAGIKPDDEF-YELETIEEAIKDAIGYTPGLECNKDGSKNTQLFQIYLCVDTSAS 205

[Close]
BLAST of CmoCh18G008790 vs. TAIR10
Match: AT2G02990.1 (AT2G02990.1 ribonuclease 1)

HSP 1 Score: 103.6 bits (257), Expect = 1.6e-22
Identity = 68/210 (32.38%), Postives = 95/210 (45.24%), Query Frame = 1 

Query: 41  LLPIC-ISLLLFFNSVYS-------FDYFQMVLQWPPATCKTKDVVCYT---APPKMFTI 100
           L  +C ISLL+   SV+S       FD+F  V QWP + C T+   CY     P   F I
Sbjct: 5   LASLCLISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGI 64

Query: 101 HGLWPSYFSGDMVVCTSKPKLDPTKQLAPLKTQLEMYWPDVI--SGDHETFWKHEWDKHA 160
           HGLWP+Y  G         K   +  ++ L T ++  WP +   SG  E FW+HEW+KH 
Sbjct: 65  HGLWPNYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHG 124

Query: 161 I---------------------------LNAAHLNPDVNISLNYLVVENAIKIAIGKRPA 211
                                       L  A +NPD   S +   + ++IK +IG  P 
Sbjct: 125 TCSESVIDQHEYFQTALNLKQKTNLLGALTKAGINPDGK-SYSLESIRDSIKESIGFTPW 184

[Close]
BLAST of CmoCh18G008790 vs. TAIR10
Match: AT1G26820.1 (AT1G26820.1 ribonuclease 3)

HSP 1 Score: 102.8 bits (255), Expect = 2.8e-22
Identity = 62/186 (33.33%), Postives = 83/186 (44.62%), Query Frame = 1 

Query: 58  FDYFQMVLQWPPATCKTKDVVCYTA---PPKMFTIHGLWPSYFSGDMVV-CTSKPKLDPT 117
           FD+F  VLQWP A C ++   CY     P   F IHGLWP+Y +G     C    + D  
Sbjct: 22  FDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLWPNYKTGGWPQNCNPDSRFDDL 81

Query: 118 KQLAPLKTQLEMYWPDVI--SGDHETFWKHEWDKHAI----------------------- 177
           + ++ L + L+  WP +   S D   FW HEW+KH                         
Sbjct: 82  R-VSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESELDQHDYFEAGLKLKQKAN 141

Query: 178 ----LNAAHLNPDVNISLNYLVVENAIKIAIGKRPALHCNKDTSKQKQLFEIILCFDTDA 211
               L  A + PD         +EN IK  +G  P + CNKD+S   QL++I LC DT A
Sbjct: 142 LLHALTNAGIKPDDKF-YEMKDIENTIKQVVGFAPGIECNKDSSHNSQLYQIYLCVDTSA 201

[Close]
BLAST of CmoCh18G008790 vs. TAIR10
Match: AT1G14210.1 (AT1G14210.1 Ribonuclease T2 family protein)

HSP 1 Score: 86.3 bits (212), Expect = 2.7e-17
Identity = 62/218 (28.44%), Postives = 91/218 (41.74%), Query Frame = 1 

Query: 44  ICISLLLFFNSVYS-------FDYFQMVLQWPPATCKTKDVVCYTAPPKM------FTIH 103
           I +SLL+  + V S       F++F  V  WP A C ++   C   PP        F IH
Sbjct: 5   IIVSLLILQSLVVSSSQTEPDFNFFYWVNYWPGAICDSQKGCC---PPTKGNTASDFIIH 64

Query: 104 GLWPSYFSGDMVVCTSKPKLDPTKQLAPLKTQLEMYWPD----VISGDHETFWKHEWDKH 163
           GLWP + +G       +  L    +++ L  Q+E  W +        +    W+HEW+KH
Sbjct: 65  GLWPQFNNGTWPAFCDQTNLFDISKISDLVCQMEKKWTEWGVWACPSNETNLWEHEWNKH 124

Query: 164 AILNAA----HLNPDVNIS-------LNYLV---------------VENAIKIAIGKRPA 219
                +    H     N+        LN L+               ++NAIK AIG  P 
Sbjct: 125 GTCVQSIFDQHSYFRTNLKFKHKVHLLNILIQKGIKPNDGFYSLDEIKNAIKCAIGFAPG 184

[Close]
BLAST of CmoCh18G008790 vs. NCBI nr
Match: gi|778683692|ref|XP_011651927.1| (PREDICTED: ribonuclease MC-like [Cucumis sativus])

HSP 1 Score: 134.8 bits (338), Expect = 1.9e-28
Identity = 79/213 (37.09%), Postives = 107/213 (50.23%), Query Frame = 1 

Query: 37  ISSNLLPICI-SLLLFFNSVYSFDYFQMVLQWPPATCKTKDVVCYTAPPKMFTIHGLWPS 96
           ++ ++  +C+ S LLF N +  FD+FQ+V QW P  C      CY  P  MFTIHGLWPS
Sbjct: 1   MAQHIFILCLLSSLLFVNGI-PFDFFQLVQQWGPNICSPAGSKCYAQPQPMFTIHGLWPS 60

Query: 97  YFSGDMVVCTSKPKLDPTKQLAPLKTQLEMYWPDVISGDHETFWKHEWDKHA-------- 156
            FS   ++C    KL P  ++  L+  L  YWPDVISG +  FW+HEW KHA        
Sbjct: 61  NFSTVPILCPRTKKLFPQGKVTSLEQHLNKYWPDVISGKNSNFWEHEWRKHADCIDPPFT 120

Query: 157 --------ILNAAHLNPDVNISLN----------YLVVENA---IKIAIGKRPALHCN-K 216
                   + +  +   D+   LN           L+ +N    IK A G  P + CN  
Sbjct: 121 IFWYFDISLRHRMNKTYDLLTILNDAGLSHQTHKDLISQNVLDPIKNATGMEPGIRCNIN 180

Query: 217 DTSKQKQLFEIILCFDTDAVTLIDCSPELRTSC 219
             +K+ QL EI+LCF  D  TLIDC   +  +C
Sbjct: 181 GITKKLQLKEIVLCFGNDGTTLIDCPSFVSNTC 212

[Close]
BLAST of CmoCh18G008790 vs. NCBI nr
Match: gi|659085730|ref|XP_008443571.1| (PREDICTED: ribonuclease MC-like [Cucumis melo])

HSP 1 Score: 128.6 bits (322), Expect = 1.4e-26
Identity = 78/211 (36.97%), Postives = 105/211 (49.76%), Query Frame = 1 

Query: 44  ICISLLLFFNSVYSFDYFQMVLQWPPATCKTKDVVCYTAPPKMFTIHGLWPSYFSGDMVV 103
           +C+  LL F + Y FD+FQ+V QW P TC      C+  P   FTIHGLWPS FS   + 
Sbjct: 8   LCLLSLLLFVNGYPFDFFQLVEQWGPNTCND-GTQCHAQPQPEFTIHGLWPSNFSNARLF 67

Query: 104 CTSKPKLDPTKQLAPLKTQLEMYWPDVISGDHETFWKHEWDKHA---------------- 163
           C ++ KL    Q++ L+  L+ YWPDVI+G++  FW +EW KH                 
Sbjct: 68  CATR-KLFDNGQISLLEGDLDRYWPDVINGNNRGFWSNEWKKHGACIDPPFNITQYFQLS 127

Query: 164 -----------ILNAA-HLNPDV-NISLNYLVVENAIKIAIGKRPALHCNKD-TSKQKQL 223
                      ILN   H N  + N  L    + N I  A  K   + CNK+  +K+ QL
Sbjct: 128 LDHHRTYDLLKILNGVWHRNRQMPNNGLAPKDILNPIFNATNKTAGIRCNKNGITKKLQL 187

Query: 224 FEIILCFDTDAVTLIDCSPELRTSCITPSTI 225
            EI+LCFD +  TLIDC   +  SC  P  +
Sbjct: 188 HEIVLCFDNNGTTLIDCPKFVSNSCNQPKFV 216

[Close]
BLAST of CmoCh18G008790 vs. NCBI nr
Match: gi|700203887|gb|KGN59020.1| (hypothetical protein Csa_3G745530 [Cucumis sativus])

HSP 1 Score: 121.7 bits (304), Expect = 1.7e-24
Identity = 74/210 (35.24%), Postives = 101/210 (48.10%), Query Frame = 1 

Query: 39  SNLLPICISLLLFFNSVYSFDYFQMVLQWPPATCKTKDVV--CYTAPPKMFTIHGLWPSY 98
           S L+   +SL++F N    F++FQ V QW P  C T   V  C+T P   FTIHGLWPS 
Sbjct: 4   SILIIYFLSLVVFVNGGVPFEFFQFVEQWGPNVCNTGARVSPCHTPPQAKFTIHGLWPSN 63

Query: 99  FSGDMVVCTSKPKLDPTKQLAPLKTQLEMYWPDVISGDHETFWKHEWDKH---------- 158
            S   ++C SK       ++  L+ QL + WPD+  G+++ FW HEWD H          
Sbjct: 64  HSNAHLLCQSKTIYS---KVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSL 123

Query: 159 -----------------AILNAAHLNPDVNISLNYLVVENAIKIAIGKRPALHCNKDTSK 218
                             IL AA LNP  + +L    +   I+    K P + CNK+   
Sbjct: 124 FQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLAIQNIMAPIQRTTKKYPGIRCNKNVKT 183

[Close]
BLAST of CmoCh18G008790 vs. NCBI nr
Match: gi|976233|dbj|BAA10892.1| (ribonuclease (RNase LC2) [Luffa aegyptiaca])

HSP 1 Score: 119.4 bits (298), Expect = 8.2e-24
Identity = 64/201 (31.84%), Postives = 99/201 (49.25%), Query Frame = 1 

Query: 44  ICISLLLFFNSVYSFDYFQMVLQWPPATCKTKDVVCYTAPPKMFTIHGLWPSYFSGDMVV 103
           + +++L       +FD+F  V QWPP TC+ +   C+  PP  F IHGLWP      +V 
Sbjct: 13  LLLTILFLGAESQTFDHFFFVQQWPPTTCQQQQKPCFQPPPATFKIHGLWPQKGPNSVVY 72

Query: 104 CTSKPKLDPTKQLAPLKTQLEMYWPDVISGDHETFWKHEWDKHAILNAAHLNPDV--NIS 163
           C      D T Q++ L+ QL++ WPDV++G++  FW+HEW+KH   + +  N  +    +
Sbjct: 73  CNK--NFDRT-QISSLENQLDVVWPDVVTGNNTGFWEHEWNKHGSCSESQFNQTLYFQTA 132

Query: 164 LNYLVVENAIK------------------------IAIGKRPALHCNKDTSKQKQLFEII 219
           +N +   N +K                           G +P L C K   +Q  L EI+
Sbjct: 133 INMMNKVNLLKALGKGGITSDERTKSSQTMQKVLLAQFGNQPFLRCKK-VGQQFWLLEIV 192

[Close]
BLAST of CmoCh18G008790 vs. NCBI nr
Match: gi|326535671|gb|ADZ76512.1| (S-locus associated ribonuclease [Prunus speciosa])

HSP 1 Score: 119.4 bits (298), Expect = 8.2e-24
Identity = 72/214 (33.64%), Postives = 102/214 (47.66%), Query Frame = 1 

Query: 34  MAFISSNLLPICISLLLFF---NSVYSFDYFQMVLQWPPATCKTKDVVCYTAPPKMFTIH 93
           MA + S+   + ++L+LF+    S  S+ YFQ V QWPP TC      CY  PP +FTIH
Sbjct: 1   MAMLKSSPAFLVLALVLFWCFSTSTGSYQYFQFVQQWPPTTCAISKKPCYQNPPSIFTIH 60

Query: 94  GLWPSYFSGDMVVCTSKPKLDPTKQLAPLKTQLEMYWPDVISGDHETFWKHEWDKHAILN 153
           GLWPS +S +  V    P          L+T+L++ WPDV SG++  FW+ EW+KH   +
Sbjct: 61  GLWPSNYSKNAWVANCSPTRFNNSLSPRLETKLKISWPDVESGNYTDFWEREWNKHGTCS 120

Query: 154 AAHLNPD---------------VNI-----------SLNYLVVENAIKIAIGKRPALHCN 212
              L+ +                NI             +Y  + + IK AI K PAL C 
Sbjct: 121 EQTLDQEQYFERSHDIWNAYNITNILKRAKILPTGGKWDYSDIVSPIKTAIRKMPALRCK 180

The following BLAST results are available for this feature:
BLAST of CmoCh18G008790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RNLE_SOLLC1.5e-2231.82Extracellular ribonuclease LE OS=Solanum lycopersicum PE=1 SV=2[more]
RNS1_ARATH2.9e-2132.38Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1[more]
RNS3_ARATH5.0e-2133.33Ribonuclease 3 OS=Arabidopsis thaliana GN=RNS3 PE=2 SV=1[more]
RNS2_ANTHI4.7e-1130.73Ribonuclease S-2 OS=Antirrhinum hispanicum GN=S2 PE=2 SV=1[more]
RNT2_HUMAN2.6e-0942.05Ribonuclease T2 OS=Homo sapiens GN=RNASET2 PE=1 SV=2[more]
BLAST of CmoCh18G008790 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAB0_CUCSA1.3e-2837.09Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736680 PE=3 SV=1[more]
A0A0A0LAN6_CUCSA1.2e-2435.24Uncharacterized protein OS=Cucumis sativus GN=Csa_3G745530 PE=3 SV=1[more]
G3C8T8_9ROSA5.7e-2433.64S-locus associated ribonuclease OS=Prunus speciosa GN=S-RNase PE=3 SV=1[more]
Q40116_LUFAE5.7e-2431.84Ribonuclease (RNase LC2) OS=Luffa aegyptiaca PE=2 SV=1[more]
A0A067L9R7_JATCU2.8e-2336.79Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15612 PE=3 SV=1[more]
BLAST of CmoCh18G008790 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G02990.11.6e-2232.38 ribonuclease 1[more]
AT1G26820.12.8e-2233.33 ribonuclease 3[more]
AT1G14210.12.7e-1728.44 Ribonuclease T2 family protein[more]
BLAST of CmoCh18G008790 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778683692|ref|XP_011651927.1|1.9e-2837.09PREDICTED: ribonuclease MC-like [Cucumis sativus][more]
gi|659085730|ref|XP_008443571.1|1.4e-2636.97PREDICTED: ribonuclease MC-like [Cucumis melo][more]
gi|700203887|gb|KGN59020.1|1.7e-2435.24hypothetical protein Csa_3G745530 [Cucumis sativus][more]
gi|976233|dbj|BAA10892.1|8.2e-2431.84ribonuclease (RNase LC2) [Luffa aegyptiaca][more]
gi|326535671|gb|ADZ76512.1|8.2e-2433.64S-locus associated ribonuclease [Prunus speciosa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001568RNase_T2-like
IPR018188RNase_T2_His_AS_1
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0033897ribonuclease T2 activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0033897 ribonuclease T2 activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G008790.1CmoCh18G008790.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001568Ribonuclease T2-likeGENE3DG3DSA:3.90.730.10coord: 58..147
score: 5.6E-28coord: 148..219
score: 1.0
IPR001568Ribonuclease T2-likePANTHERPTHR11240RIBONUCLEASE T2coord: 15..210
score: 1.1
IPR001568Ribonuclease T2-likePFAMPF00445Ribonuclease_T2coord: 60..147
score: 1.2E-21coord: 148..210
score: 2.
IPR001568Ribonuclease T2-likeunknownSSF55895Ribonuclease Rh-likecoord: 53..218
score: 3.4
IPR018188Ribonuclease T2, His active site 1PROSITEPS00530RNASE_T2_1coord: 87..94
scor

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh18G008790CmaCh18G008740Cucurbita maxima (Rimu)cmacmoB406
CmoCh18G008790Cp4.1LG09g04300Cucurbita pepo (Zucchini)cmocpeB376
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh18G008790Wax gourdcmowgoB0540
CmoCh18G008790Cucurbita moschata (Rifu)cmocmoB336
CmoCh18G008790Cucumber (Gy14) v1cgycmoB0847
CmoCh18G008790Cucurbita maxima (Rimu)cmacmoB706
CmoCh18G008790Wild cucumber (PI 183967)cmocpiB411
CmoCh18G008790Cucumber (Chinese Long) v2cmocuB406
CmoCh18G008790Melon (DHL92) v3.5.1cmomeB344
CmoCh18G008790Cucurbita pepo (Zucchini)cmocpeB392
CmoCh18G008790Bottle gourd (USVL1VR-Ls)cmolsiB364
CmoCh18G008790Cucumber (Gy14) v2cgybcmoB603
CmoCh18G008790Melon (DHL92) v3.6.1cmomedB395
CmoCh18G008790Silver-seed gourdcarcmoB0654
CmoCh18G008790Silver-seed gourdcarcmoB1135
CmoCh18G008790Cucumber (Chinese Long) v3cmocucB0487