CmoCh18G008710 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh18G008710
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	E3 ubiquitin-protein ligase (6.3.2.-)
Location	Cmo_Chr18 : 10014647 .. 10019209 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAGCGCTGCCGCTTTCCAACGCTCGTTTAAACTATAATTTTCTCTTTTTCTCTCTTCTGGGTATTTCGTTTGGCGATTGAAAAAGTTCAAAAAAGCTCTGAAAATTTCCCTTTCGATCATAATAAAATCAATTTTCAGAATTTCGAGGACACTGAAGCCGGCCTGCTTGTTGTGGGCAAGGAGAGAAGGGCCCGCACGTCTTAATTTCTCTCTTTTTCTTTCACTTTTTGTTCTTTCTCGAGAAATTTCCCTCTAATCCTCTAATCTCTTCTGTTCTTCATACGCTCCTCTTTCCTCTCTCTCCCTATCACCCTTTAATTTGAATTTTCGCGGCTCCCAAACGTGTAATATCTCTGTGTATTATCTCTTTTTATGCTGTTTCTTGTCGTATCACACCCCAAGTCTGATTATCTTTTGAGGTATTTCTTGTTTTTGTTTGTTCTTCTTTGATTTCTTATGGGGTTTTTGAGTCGTTATGATCTGGGGTTTGCGTTATTTCTGGTTTTATTATTGTCTTGTGTTGTTTGAGGCCTTTGATTTCGTATGTTCTAATCTGCATTCCGTTTGTTGGTTATCTCATTGTGACTCTGGATATTTGTTGTTCATGTTTTTTTTTTTGGTGTTGTTCTTCTTTTGGAGCTCTGGATTTAGAAAATTTGTTGATATCATAACATTGAAGTTTTGGGTAATGATAGTTATTTTGTGTTTTTCATTCATTTATTCCATCGGACTAAAGGGTTCCATTCTCATGATTCTGAACTTGGAGGTATTCCATAAATTGCTCGAGCTTCTTGTTCTTGTTCTTTTTCTCTGTTGGGTGTTCTGGTTTCTTGTCTAATGGCTTGAGATGCTTTCTTTTTCTTGTAGTGAAGCATCTTTGTGGTTAGTAATTCATAGTTTTTACGCTTTGGTTTGCAATTTGGTAAGTTTCGGTGAAAGTAATGTTGAGGATTGTTGGGAGGGAGTCCTACGTTGGCTAATCTAGGGAATGATCGTGGGTTTATAAGTGAGGAATACTTCTCCATTGGTATGAGGCCTTTTGGGGAAGCCCGAAGCAAAGCCATGAAAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGATCCGTGATTCCTAATAGGGTATTAGAGTCATGCCCTTAACTTAGTCATGTCAATAGAATTCTCAAATGTTGAACAAAGAAAGTTGTGAGCCTCGAAGGTGTAGTCAAAATTGACTCAAGTGTCGAACAAATGGTGTACTTTGTTCGAGGACTCCATAGGCCTCGGGGGAGACTCTATAGTGTACTTTGTTTGAGGAGAGGATTGTTGAGGATTGTTGGGAGGGAGTCCCACATTGGCTGTATGGTAATGATTGTGAGTTTATAAGTACGTAATATATCTCCATTGGTATGAGGCCTTTTAGGAAGCCTGAAGCAAAGCCATGAGAGTTTATACTCAACGTGGACAATATCATACCATTGGGGAGATCCGTGATTCTTAACATGGTATCAGAGTCATGCCTTTAACTTAGCCATGTCAATAGAATTCTCAAATGTCGAATAAAGAAAGTTGTGAGTCTCGAAGGTGTAGTCAAAAGTGACTCAAGTGTCGAACAAAGGGTGTTCTTTGTTCGAGGACTATAGAGAAGGAGTCGAGCCTCGATTAAGGGGAGGCTGTTTGAGGGCTCCATAGACCTTGGGGGAGGCTCTATAATGTACTTTGTTCGAGGAGAGGATTATTGAGGGTTATTGGGAGGGAGTCCCACGTTGGCTAATTTAGGGAATGATCATGGGTTTATAAGTAATACATCTTCATAAGTAATACATCTCCATTGTTATGAGGTCTTTTGGGGAAGCCCAAAGCAAAGCCAATGAGAACTTATACTCAAAGTGGACAATATCATACCATTGTGGAGAGTTGTTATTTTTAACAAGTAACCCTTAGTTCCTTATCGGTGGGTTTTGGCTTCTGATAGCCCCTAGAGATTTACTAGAACACGTCCTTATCTGGTGAAGCACTCTTCTCAAGAAGCCTAGTTAGTTGCTGTGAAGATGTTCTTATACTTGCAAGTTCTTGTTCATACTTTTCTTAACTCATGTTTATGGATGTAGGCATTCTATTGATTAAAATGTCATCTGCAAATCCTTATTTTGATGACGTTCGGACGAAACCGGAGGTAATCGATCCTCCCCAAGATGAGGACATGATGGATGTTAGCGAAAGTGTTAGTGATCCTACTCGAAATGGAGGAAAGCCTAATGTAGCTGTCTCTAGCAGCGTTCGTGAGCTGTTGGAGTGTCCTGTTTGCTTGAATGCTATGTACCCTCCCATTCATCAGGTCTGTTGCCATCTTTTCAAAATCTTTTGAACGAAATTGCTTACTTTTTTTAAATTCCTTTAATCTAATTTGTCGACACGATATTGGCCTTTTTCTTAAAGGCGTCTAAGGAAGGTACCATATAGGTGAACGTATTCAATAGTTTAAACGAACAACTAGAAGCCATACTGTACCTTGGAAGATAGATGATTTTGTGATAAGGAATCGCTACAAAAGAAGTAAGATTTGGATTATCTTATTGATCAAATATCACAAGCAACATTGATCATGTCAAGCTTGAATGATTCTAAACATGCAATCTAAACTACGAAGAATTGAAAAAAAAAAAAAAAAGAACTTAGCCCTCGGATAAAGAAAAGGTAAGAACTGCGAGATCTCTAGTGAGGACACTGGGCCCCGAAGTGGGGTTGATTGTGAGATCCCACATCGGATGGAGAGGGGAATAAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACACGTTTTAATGACCTTGAGGGGAACCCGAAAGGGAAAGCCCGAAGAAGACAATATCTGATAGTGGTGGGCTTGGGCTATTACAAAAACACTTAGCTCTGATGATGGAAACTAAAATTCGGATTACCTTGTTGATCAAATATCTCAAGGTAAGAACACTTGTTTGAGATACAAATCACTCCACAAACAAGATCGATCATGTCAAGCTTGAATGATTCTAAACATGCAATCTTAATTACGTAGAATTGCAAAGAAACTTAGTCATTGGCTAAAGGAAAGCACAAATGCTCTTTTTACTCGTCCCTTTCACAAAGACAACATACACCGCTCTATATAGCTTCAAAATAAAAACCTTAACCTTAGGCATTCCAAGAGCCATAACTTTCATAGTATAGCAGGTTAGACGTCTGATCTGGATGATATCTACCGTGTTAATACCACCTAAAATCAACGTTCAAATCTTACTTTCTTAATATAGTTGTGCTTTGCATGGATGTAGTCTGCTACTTACTCAGAACCTTCATTTTGGCATTTGAGCTTGCCTTGGTTCATATCGATTAACGTTCTGTCATTGCAGTGTTCGAATGGTCACACATTGTGTTCGGGTTGCAAGCCTAGGGTGCACAACCGGTGCCCGACCTGCAGGCATGAACTTGGCAATATCAGATGTCTTGCATTAGAGAAAGTGGCTGCATCTTTGGAACTTCCATGTACATATCAAACCTTTGGGTGCGCGGGCATATACCCGTACTATAGCAAGCTGAAACATGAATCTCAATGTGCATATCGACCCTATAACTGTCCGTATGCGGGGTCGGAATGCACAGTTGTTGGTGATATTCCATTTTTGGTAGCACACCTAAAGGATGATCACAAAGTCGACATGCATAGTGGGAGCACTTTCAATCATCGATACGTCAAGTCAAACCCGCAAGAGGTCGAAAATGCTACCTGGATGCTAACGGTACTATTCTACTTCATATAAATCATTTTTGGGTTAAACATGTATTCAAATGAAGCCTTCGTTATCAAGAACGAGCGTATTAGCTAGAAGAGGCTAACGAATCGAGTTCATAGGTTGTAAATATTGAGATGTCTGATACAAAACTGATACCGTTTTTTCGGTTGACTTGTAGGTTTTCAGCTGTTTTGGTCATTATTTTTGTTTACATTTCGAAGCTTTCCAGCTCGGAATGGCACCTGTCTATATAGCCTTCTTGCGCTTCATGGGTGACGATAACGAGGCAAAGAACTACAGTTATAGCCTTGAGGTTGGTGGAAATGGGAGGAAGATGGTTTGGCAAGGAGTGCCACGGAGTATTCGGGACAGTCATCGGAAGGTGCGAGACAGCTTTGACGGGCTTATTATCCAACGAAACATGGCTCTGTTCTTCTCGGGCGGAGATCGGAAGGAATTGAAGCTGAGGGTAACTGGTAGGATTTGGAAGGAGCAGTGAAAGTGTAGGTACGTTTAGGTGTCCTTAGAAAGTAAAGGAGGCTAAATAGAGAGAATGATACTATAGACGTCCAACCATGTAATGTAATATAGTTGTTCAAATACATCAACTGGAAAGCCTGTGTTCTTTACTCTTGTAAGAGAATTTCTACTTACTACTTTTTGCATTTTGCTCCCCACAAGAGTTCGATATTGCACTTTTAGGTCCATCCCGAGAAAAACTTAAAAAGTCTTACTCGTTAAACTATGCTTAAGTTGATACGAGCACTATGTCTTTATCTAAATGCAGTTTCTAT

mRNA sequence

CAGAGCGCTGCCGCTTTCCAACGCTCGTTTAAACTATAATTTTCTCTTTTTCTCTCTTCTGGGTATTTCGTTTGGCGATTGAAAAAGTTCAAAAAAGCTCTGAAAATTTCCCTTTCGATCATAATAAAATCAATTTTCAGAATTTCGAGGACACTGAAGCCGGCCTGCTTGTTGTGGGCAAGGAGAGAAGGGCCCGCACGTCTTAATTTCTCTCTTTTTCTTTCACTTTTTGTTCTTTCTCGAGAAATTTCCCTCTAATCCTCTAATCTCTTCTGTTCTTCATACGCTCCTCTTTCCTCTCTCTCCCTATCACCCTTTAATTTGAATTTTCGCGGCTCCCAAACGTGTAATATCTCTGTGTATTATCTCTTTTTATGCTGTTTCTTGTCGTATCACACCCCAAGTCTGATTATCTTTTGAGGCATTCTATTGATTAAAATGTCATCTGCAAATCCTTATTTTGATGACGTTCGGACGAAACCGGAGGTAATCGATCCTCCCCAAGATGAGGACATGATGGATGTTAGCGAAAGTGTTAGTGATCCTACTCGAAATGGAGGAAAGCCTAATGTAGCTGTCTCTAGCAGCGTTCGTGAGCTGTTGGAGTGTCCTGTTTGCTTGAATGCTATGTACCCTCCCATTCATCAGTGTTCGAATGGTCACACATTGTGTTCGGGTTGCAAGCCTAGGGTGCACAACCGGTGCCCGACCTGCAGGCATGAACTTGGCAATATCAGATGTCTTGCATTAGAGAAAGTGGCTGCATCTTTGGAACTTCCATGTACATATCAAACCTTTGGGTGCGCGGGCATATACCCGTACTATAGCAAGCTGAAACATGAATCTCAATGTGCATATCGACCCTATAACTGTCCGTATGCGGGGTCGGAATGCACAGTTGTTGGTGATATTCCATTTTTGGTAGCACACCTAAAGGATGATCACAAAGTCGACATGCATAGTGGGAGCACTTTCAATCATCGATACGTCAAGTCAAACCCGCAAGAGGTCGAAAATGCTACCTGGATGCTAACGGTTTTCAGCTGTTTTGGTCATTATTTTTGTTTACATTTCGAAGCTTTCCAGCTCGGAATGGCACCTGTCTATATAGCCTTCTTGCGCTTCATGGGTGACGATAACGAGGCAAAGAACTACAGTTATAGCCTTGAGGTTGGTGGAAATGGGAGGAAGATGGTTTGGCAAGGAGTGCCACGGAGTATTCGGGACAGTCATCGGAAGGTGCGAGACAGCTTTGACGGGCTTATTATCCAACGAAACATGGCTCTGTTCTTCTCGGGCGGAGATCGGAAGGAATTGAAGCTGAGGGTAACTGGTAGGATTTGGAAGGAGCAGTGAAAGTGTAGGTACGTTTAGGTGTCCTTAGAAAGTAAAGGAGGCTAAATAGAGAGAATGATACTATAGACGTCCAACCATGTAATGTAATATAGTTGTTCAAATACATCAACTGGAAAGCCTGTGTTCTTTACTCTTGTAAGAGAATTTCTACTTACTACTTTTTGCATTTTGCTCCCCACAAGAGTTCGATATTGCACTTTTAGGTCCATCCCGAGAAAAACTTAAAAAGTCTTACTCGTTAAACTATGCTTAAGTTGATACGAGCACTATGTCTTTATCTAAATGCAGTTTCTAT

Coding sequence (CDS)

ATGTCATCTGCAAATCCTTATTTTGATGACGTTCGGACGAAACCGGAGGTAATCGATCCTCCCCAAGATGAGGACATGATGGATGTTAGCGAAAGTGTTAGTGATCCTACTCGAAATGGAGGAAAGCCTAATGTAGCTGTCTCTAGCAGCGTTCGTGAGCTGTTGGAGTGTCCTGTTTGCTTGAATGCTATGTACCCTCCCATTCATCAGTGTTCGAATGGTCACACATTGTGTTCGGGTTGCAAGCCTAGGGTGCACAACCGGTGCCCGACCTGCAGGCATGAACTTGGCAATATCAGATGTCTTGCATTAGAGAAAGTGGCTGCATCTTTGGAACTTCCATGTACATATCAAACCTTTGGGTGCGCGGGCATATACCCGTACTATAGCAAGCTGAAACATGAATCTCAATGTGCATATCGACCCTATAACTGTCCGTATGCGGGGTCGGAATGCACAGTTGTTGGTGATATTCCATTTTTGGTAGCACACCTAAAGGATGATCACAAAGTCGACATGCATAGTGGGAGCACTTTCAATCATCGATACGTCAAGTCAAACCCGCAAGAGGTCGAAAATGCTACCTGGATGCTAACGGTTTTCAGCTGTTTTGGTCATTATTTTTGTTTACATTTCGAAGCTTTCCAGCTCGGAATGGCACCTGTCTATATAGCCTTCTTGCGCTTCATGGGTGACGATAACGAGGCAAAGAACTACAGTTATAGCCTTGAGGTTGGTGGAAATGGGAGGAAGATGGTTTGGCAAGGAGTGCCACGGAGTATTCGGGACAGTCATCGGAAGGTGCGAGACAGCTTTGACGGGCTTATTATCCAACGAAACATGGCTCTGTTCTTCTCGGGCGGAGATCGGAAGGAATTGAAGCTGAGGGTAACTGGTAGGATTTGGAAGGAGCAGTGA

Homology

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BLAST of CmoCh18G008710 vs. Swiss-Prot
Match: SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2)

HSP 1 Score: 482.6 bits (1241), Expect = 3.1e-135
Identity = 223/289 (77.16%), Postives = 246/289 (85.12%), Query Frame = 1


Query: 18  IDPPQDEDMMDVSESVSDPTRNGGKPNV-AVSSSVRELLECPVCLNAMYPPIHQCSNGHT 77
           ID   D+D +      S     GG   V + ++SV ELLECPVC N+MYPPIHQC NGHT
Sbjct: 6   IDSVIDDDEIHQKHQFSSTKSQGGATVVISPATSVYELLECPVCTNSMYPPIHQCHNGHT 65

Query: 78  LCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCTYQTFGCAGIYPYYSKLKHES 137
           LCS CK RVHNRCPTCR ELG+IRCLALEKVA SLELPC Y   GC GI+PYYSKLKHES
Sbjct: 66  LCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYNLGCLGIFPYYSKLKHES 125

Query: 138 QCAYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHSGSTFNHRYVKSNPQEVENATW 197
           QC +RPY+CPYAGSEC  VGDI FLVAHL+DDHKVDMH+G TFNHRYVKSNP+EVENATW
Sbjct: 126 QCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATW 185

Query: 198 MLTVFSCFGHYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQG 257
           MLTVF CFG YFCLHFEAFQLGMAPVY+AFLRFMGD+++A+NY+YSLEVGG+GRK  W+G
Sbjct: 186 MLTVFQCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEG 245

Query: 258 VPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 306
            PRS+RDSHRKVRDS DGLIIQRNMALFFSGGD+KELKLRVTGRIWKEQ
Sbjct: 246 TPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVTGRIWKEQ 294

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BLAST of CmoCh18G008710 vs. Swiss-Prot
Match: SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 1.2e-134
Identity = 215/258 (83.33%), Postives = 236/258 (91.47%), Query Frame = 1


Query: 48  SSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKV 107
           ++SV ELLECPVC N+MYPPIHQC NGHTLCS CK RVHNRCPTCR ELG+IRCLALEKV
Sbjct: 54  TTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKV 113

Query: 108 AASLELPCTYQTFGCAGIYPYYSKLKHESQCAYRPYNCPYAGSECTVVGDIPFLVAHLKD 167
           A SLELPC + + GC  I+PYYSKLKHE+ C +RPY+CPYAGSEC+V GDIPFLVAHL+D
Sbjct: 114 AESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRD 173

Query: 168 DHKVDMHSGSTFNHRYVKSNPQEVENATWMLTVFSCFGHYFCLHFEAFQLGMAPVYIAFL 227
           DHKVDMHSG TFNHRYVKSNP+EVENATWMLTVF CFG YFCLHFEAFQLGMAPVY+AFL
Sbjct: 174 DHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFL 233

Query: 228 RFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSG 287
           RFMGD+ EA+NY+YSLEVGG GRK++W+G PRS+RDSHRKVRDS DGLIIQRNMALFFSG
Sbjct: 234 RFMGDETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSG 293

Query: 288 GDRKELKLRVTGRIWKEQ 306
           GDRKELKLRVTGRIWKEQ
Sbjct: 294 GDRKELKLRVTGRIWKEQ 311

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BLAST of CmoCh18G008710 vs. Swiss-Prot
Match: SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 1.1e-132
Identity = 215/265 (81.13%), Postives = 236/265 (89.06%), Query Frame = 1


Query: 41  GKPNVAVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIR 100
           G    A ++SV ELLECPVC  +MYPPIHQC NGHTLCS CK RVHNRCPTCR ELG+IR
Sbjct: 48  GPTATAPATSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIR 107

Query: 101 CLALEKVAASLELPCTYQTFGCAGIYPYYSKLKHESQCAYRPYNCPYAGSECTVVGDIPF 160
           CLALEKVA SLELPC +   GC  I+PYYSKLKHES C +RPY+CPYAGSEC +VGDIPF
Sbjct: 108 CLALEKVAESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPF 167

Query: 161 LVAHLKDDHKVDMHSGSTFNHRYVKSNPQEVENATWMLTVFSCFGHYFCLHFEAFQLGMA 220
           LVAHL+DDHKVDMH+GSTFNHRYVKSNP+EVENATWMLTVF CFG YFCLHFEAFQLGM 
Sbjct: 168 LVAHLRDDHKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMG 227

Query: 221 PVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRN 280
           PVY+AFLRFMGD+ +A++YSYSLEVGG+GRK+ W+G PRSIRDSHRKVRDS DGLIIQRN
Sbjct: 228 PVYMAFLRFMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRN 287

Query: 281 MALFFSGGDRKELKLRVTGRIWKEQ 306
           MALFFSGGDRKELKLRVTG+IWKEQ
Sbjct: 288 MALFFSGGDRKELKLRVTGKIWKEQ 312

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BLAST of CmoCh18G008710 vs. Swiss-Prot
Match: SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=1 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 2.3e-130
Identity = 213/274 (77.74%), Postives = 233/274 (85.04%), Query Frame = 1


Query: 36  PTRNG----GKPNVAVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPT 95
           PT+ G    GK  +  ++ V ELLECPVC N MYPPIHQC NGHTLCS CK RV N CPT
Sbjct: 35  PTKPGSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPT 94

Query: 96  CRHELGNIRCLALEKVAASLELPCTYQTFGCAGIYPYYSKLKHESQCAYRPYNCPYAGSE 155
           CR+ELGNIRCLALEKVA SLE+PC YQ  GC  I+PYYSKLKHE  C +RPY CPYAGSE
Sbjct: 95  CRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSE 154

Query: 156 CTVVGDIPFLVAHLKDDHKVDMHSGSTFNHRYVKSNPQEVENATWMLTVFSCFGHYFCLH 215
           C+V GDIP LV HLKDDHKVDMH G TFNHRYVKSNP EVENATWMLTVF+CFG  FCLH
Sbjct: 155 CSVTGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLH 214

Query: 216 FEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDS 275
           FEAFQLGMAPVY+AFLRFMGD+NEAK +SYSLEVG +GRK+ WQG+PRSIRDSHRKVRDS
Sbjct: 215 FEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDS 274

Query: 276 FDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 306
            DGLII RN+AL+FSGGDR+ELKLRVTGRIWKE+
Sbjct: 275 QDGLIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308

[Close]

BLAST of CmoCh18G008710 vs. Swiss-Prot
Match: SINA1_ARATH (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE=3 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 1.8e-127
Identity = 210/277 (75.81%), Postives = 232/277 (83.75%), Query Frame = 1


Query: 31  ESVSDPTRNGGKP--NVAVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNR 90
           E+ S PT++G         S+ V ELLECPVC N MYPPIHQC NGHTLCS CK RV N 
Sbjct: 29  EANSKPTKSGSGSIGKFHSSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNT 88

Query: 91  CPTCRHELGNIRCLALEKVAASLELPCTYQTFGCAGIYPYYSKLKHESQCAYRPYNCPYA 150
           CPTCR+ELGNIRCLALEKVA SLE+PC YQ  GC  I+PYYSKLKHE  C +R Y+CPYA
Sbjct: 89  CPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYA 148

Query: 151 GSECTVVGDIPFLVAHLKDDHKVDMHSGSTFNHRYVKSNPQEVENATWMLTVFSCFGHYF 210
           GSEC+V GDIP LV HLKDDHKVDMH G TFNHRYVKSNP EVENATWMLTVF+CFG  F
Sbjct: 149 GSECSVTGDIPTLVDHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQF 208

Query: 211 CLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKV 270
           CLHFEAFQLGMAPVY+AFLRFMGD+NEAK +SYSLEVG + RK+ WQG+PRSIRDSHRKV
Sbjct: 209 CLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKV 268

Query: 271 RDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 306
           RDS DGLII RN+AL+FSG D++ELKLRVTGRIWKE+
Sbjct: 269 RDSQDGLIIPRNLALYFSGSDKEELKLRVTGRIWKEE 305

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BLAST of CmoCh18G008710 vs. TrEMBL
Match: E5GCK0_CUCME (E3 ubiquitin-protein ligase OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 624.4 bits (1609), Expect = 7.3e-176
Identity = 291/305 (95.41%), Postives = 297/305 (97.38%), Query Frame = 1


Query: 1   MSSANPYFDDVRTKPEVIDPPQDEDMMDVSESVSDPTRNGGKPNVAVSSSVRELLECPVC 60
           M+SANPYFDD+R KPEVIDPPQD+DMMDVSESVSDP R GGKPNV VSSSVRELLECPVC
Sbjct: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARAGGKPNV-VSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCTYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPC YQTF
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120

Query: 121 GCAGIYPYYSKLKHESQCAYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHSGSTFN 180
           GC GIYPYYSKLKHESQC YRPYNCPYAGSEC+V+GDIPFLVAHLKDDHKVDMH+GSTFN
Sbjct: 121 GCVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVAHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGHYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFG YFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 301 IWKEQ 304

[Close]

BLAST of CmoCh18G008710 vs. TrEMBL
Match: A0A0A0KRN7_CUCSA (E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_5G623730 PE=3 SV=1)

HSP 1 Score: 624.4 bits (1609), Expect = 7.3e-176
Identity = 290/305 (95.08%), Postives = 298/305 (97.70%), Query Frame = 1


Query: 1   MSSANPYFDDVRTKPEVIDPPQDEDMMDVSESVSDPTRNGGKPNVAVSSSVRELLECPVC 60
           M+SANPYFDD+R KPEVIDPPQD+DMMDVSESVSDP R+GGKPNV VSSSVRELLECPVC
Sbjct: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPNV-VSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCTYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPC YQTF
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120

Query: 121 GCAGIYPYYSKLKHESQCAYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHSGSTFN 180
           GC GIYPYYSKLKHESQC YRPYNCPYAGSEC+V+GDIPFLV+HLKDDHKVDMH+GSTFN
Sbjct: 121 GCVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGHYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFG YFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 301 IWKEQ 304

[Close]

BLAST of CmoCh18G008710 vs. TrEMBL
Match: A0A067KWI1_JATCU (E3 ubiquitin-protein ligase OS=Jatropha curcas GN=JCGZ_24516 PE=3 SV=1)

HSP 1 Score: 610.9 bits (1574), Expect = 8.4e-172
Identity = 281/305 (92.13%), Postives = 294/305 (96.39%), Query Frame = 1


Query: 1   MSSANPYFDDVRTKPEVIDPPQDEDMMDVSESVSDPTRNGGKPNVAVSSSVRELLECPVC 60
           M+S NP+F+D+R+KPEVIDPPQ+EDMMDVSESV+DP +   KPNV VSSSVRELLECPVC
Sbjct: 1   MASGNPFFEDMRSKPEVIDPPQNEDMMDVSESVNDPAQMALKPNVTVSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCTYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPC YQ+F
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSF 120

Query: 121 GCAGIYPYYSKLKHESQCAYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHSGSTFN 180
           GC GIYPYYSKLKHESQC YRPYNCPYAGSECTV+GDIP+LVAHLKDDHKVDMH+GSTFN
Sbjct: 121 GCLGIYPYYSKLKHESQCVYRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGHYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNP EVENATWMLTVFSCFG YFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRKM+WQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKMIWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 301 IWKEQ 305

[Close]

BLAST of CmoCh18G008710 vs. TrEMBL
Match: B9RGC2_RICCO (E3 ubiquitin-protein ligase OS=Ricinus communis GN=RCOM_1452850 PE=3 SV=1)

HSP 1 Score: 606.7 bits (1563), Expect = 1.6e-170
Identity = 278/305 (91.15%), Postives = 290/305 (95.08%), Query Frame = 1


Query: 1   MSSANPYFDDVRTKPEVIDPPQDEDMMDVSESVSDPTRNGGKPNVAVSSSVRELLECPVC 60
           M+S NP+FDD+R+KPEVIDPP  EDMMDV ESV+DP +   KPNV VSSSVRELLECPVC
Sbjct: 1   MASGNPFFDDLRSKPEVIDPPPSEDMMDVGESVNDPAQTAMKPNVTVSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCTYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPC Y +F
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYHSF 120

Query: 121 GCAGIYPYYSKLKHESQCAYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHSGSTFN 180
           GC GIYPYYSKLKHESQC YRPYNCPYAGSECTV+GDIP+LVAHLKDDHKVDMH+GSTFN
Sbjct: 121 GCVGIYPYYSKLKHESQCVYRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGHYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNP EVENATWMLTVFSCFG YFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNY+
Sbjct: 181 HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYT 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRKM+WQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKMIWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 301 IWKEQ 305

[Close]

BLAST of CmoCh18G008710 vs. TrEMBL
Match: A0A0A0KQG8_CUCSA (E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_5G456720 PE=3 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 4.6e-170
Identity = 278/305 (91.15%), Postives = 293/305 (96.07%), Query Frame = 1


Query: 1   MSSANPYFDDVRTKPEVIDPPQDEDMMDVSESVSDPTRNGGKPNVAVSSSVRELLECPVC 60
           M+S +PYFDD+R+KPEVIDPPQ+EDMMD+ E+V  P +N  KPNVAVSSSVRELLECPVC
Sbjct: 1   MASGSPYFDDLRSKPEVIDPPQNEDMMDIRETVDHPIQNELKPNVAVSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCTYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPC Y T+
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYHTY 120

Query: 121 GCAGIYPYYSKLKHESQCAYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHSGSTFN 180
           GC GIYPYYSK+KHESQC YRPY+CPYAGSEC++VGDIP+LVAHLKDDHKVDMHSGSTFN
Sbjct: 121 GCIGIYPYYSKVKHESQCVYRPYSCPYAGSECSIVGDIPYLVAHLKDDHKVDMHSGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGHYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFG YFCLHFEAFQLGMAPVYIAFLRFMGDDN+AKNYS
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNDAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 301 IWKEQ 305

[Close]

BLAST of CmoCh18G008710 vs. TAIR10
Match: AT3G61790.1 (AT3G61790.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 480.7 bits (1236), Expect = 6.6e-136
Identity = 215/258 (83.33%), Postives = 236/258 (91.47%), Query Frame = 1


Query: 48  SSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKV 107
           ++SV ELLECPVC N+MYPPIHQC NGHTLCS CK RVHNRCPTCR ELG+IRCLALEKV
Sbjct: 54  TTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKV 113

Query: 108 AASLELPCTYQTFGCAGIYPYYSKLKHESQCAYRPYNCPYAGSECTVVGDIPFLVAHLKD 167
           A SLELPC + + GC  I+PYYSKLKHE+ C +RPY+CPYAGSEC+V GDIPFLVAHL+D
Sbjct: 114 AESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRD 173

Query: 168 DHKVDMHSGSTFNHRYVKSNPQEVENATWMLTVFSCFGHYFCLHFEAFQLGMAPVYIAFL 227
           DHKVDMHSG TFNHRYVKSNP+EVENATWMLTVF CFG YFCLHFEAFQLGMAPVY+AFL
Sbjct: 174 DHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFL 233

Query: 228 RFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSG 287
           RFMGD+ EA+NY+YSLEVGG GRK++W+G PRS+RDSHRKVRDS DGLIIQRNMALFFSG
Sbjct: 234 RFMGDETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSG 293

Query: 288 GDRKELKLRVTGRIWKEQ 306
           GDRKELKLRVTGRIWKEQ
Sbjct: 294 GDRKELKLRVTGRIWKEQ 311

[Close]

BLAST of CmoCh18G008710 vs. TAIR10
Match: AT4G27880.1 (AT4G27880.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 474.2 bits (1219), Expect = 6.2e-134
Identity = 215/265 (81.13%), Postives = 236/265 (89.06%), Query Frame = 1


Query: 41  GKPNVAVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIR 100
           G    A ++SV ELLECPVC  +MYPPIHQC NGHTLCS CK RVHNRCPTCR ELG+IR
Sbjct: 48  GPTATAPATSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIR 107

Query: 101 CLALEKVAASLELPCTYQTFGCAGIYPYYSKLKHESQCAYRPYNCPYAGSECTVVGDIPF 160
           CLALEKVA SLELPC +   GC  I+PYYSKLKHES C +RPY+CPYAGSEC +VGDIPF
Sbjct: 108 CLALEKVAESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPF 167

Query: 161 LVAHLKDDHKVDMHSGSTFNHRYVKSNPQEVENATWMLTVFSCFGHYFCLHFEAFQLGMA 220
           LVAHL+DDHKVDMH+GSTFNHRYVKSNP+EVENATWMLTVF CFG YFCLHFEAFQLGM 
Sbjct: 168 LVAHLRDDHKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMG 227

Query: 221 PVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRN 280
           PVY+AFLRFMGD+ +A++YSYSLEVGG+GRK+ W+G PRSIRDSHRKVRDS DGLIIQRN
Sbjct: 228 PVYMAFLRFMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRN 287

Query: 281 MALFFSGGDRKELKLRVTGRIWKEQ 306
           MALFFSGGDRKELKLRVTG+IWKEQ
Sbjct: 288 MALFFSGGDRKELKLRVTGKIWKEQ 312

[Close]

BLAST of CmoCh18G008710 vs. TAIR10
Match: AT3G58040.1 (AT3G58040.1 seven in absentia of Arabidopsis 2)

HSP 1 Score: 466.5 bits (1199), Expect = 1.3e-131
Identity = 213/274 (77.74%), Postives = 233/274 (85.04%), Query Frame = 1


Query: 36  PTRNG----GKPNVAVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPT 95
           PT+ G    GK  +  ++ V ELLECPVC N MYPPIHQC NGHTLCS CK RV N CPT
Sbjct: 35  PTKPGSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPT 94

Query: 96  CRHELGNIRCLALEKVAASLELPCTYQTFGCAGIYPYYSKLKHESQCAYRPYNCPYAGSE 155
           CR+ELGNIRCLALEKVA SLE+PC YQ  GC  I+PYYSKLKHE  C +RPY CPYAGSE
Sbjct: 95  CRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSE 154

Query: 156 CTVVGDIPFLVAHLKDDHKVDMHSGSTFNHRYVKSNPQEVENATWMLTVFSCFGHYFCLH 215
           C+V GDIP LV HLKDDHKVDMH G TFNHRYVKSNP EVENATWMLTVF+CFG  FCLH
Sbjct: 155 CSVTGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLH 214

Query: 216 FEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDS 275
           FEAFQLGMAPVY+AFLRFMGD+NEAK +SYSLEVG +GRK+ WQG+PRSIRDSHRKVRDS
Sbjct: 215 FEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDS 274

Query: 276 FDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 306
            DGLII RN+AL+FSGGDR+ELKLRVTGRIWKE+
Sbjct: 275 QDGLIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308

[Close]

BLAST of CmoCh18G008710 vs. TAIR10
Match: AT2G41980.1 (AT2G41980.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 456.8 bits (1174), Expect = 1.0e-128
Identity = 210/277 (75.81%), Postives = 232/277 (83.75%), Query Frame = 1


Query: 31  ESVSDPTRNGGKP--NVAVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNR 90
           E+ S PT++G         S+ V ELLECPVC N MYPPIHQC NGHTLCS CK RV N 
Sbjct: 29  EANSKPTKSGSGSIGKFHSSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNT 88

Query: 91  CPTCRHELGNIRCLALEKVAASLELPCTYQTFGCAGIYPYYSKLKHESQCAYRPYNCPYA 150
           CPTCR+ELGNIRCLALEKVA SLE+PC YQ  GC  I+PYYSKLKHE  C +R Y+CPYA
Sbjct: 89  CPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYA 148

Query: 151 GSECTVVGDIPFLVAHLKDDHKVDMHSGSTFNHRYVKSNPQEVENATWMLTVFSCFGHYF 210
           GSEC+V GDIP LV HLKDDHKVDMH G TFNHRYVKSNP EVENATWMLTVF+CFG  F
Sbjct: 149 GSECSVTGDIPTLVDHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQF 208

Query: 211 CLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKV 270
           CLHFEAFQLGMAPVY+AFLRFMGD+NEAK +SYSLEVG + RK+ WQG+PRSIRDSHRKV
Sbjct: 209 CLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKV 268

Query: 271 RDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 306
           RDS DGLII RN+AL+FSG D++ELKLRVTGRIWKE+
Sbjct: 269 RDSQDGLIIPRNLALYFSGSDKEELKLRVTGRIWKEE 305

[Close]

BLAST of CmoCh18G008710 vs. TAIR10
Match: AT5G53360.1 (AT5G53360.1 TRAF-like superfamily protein)

HSP 1 Score: 378.6 bits (971), Expect = 3.5e-105
Identity = 170/204 (83.33%), Postives = 187/204 (91.67%), Query Frame = 1


Query: 102 LALEKVAASLELPCTYQTFGCAGIYPYYSKLKHESQCAYRPYNCPYAGSECTVVGDIPFL 161
           +ALEKVA SLELPC Y   GC GI+PYYSKLKHESQC +RPY+CPYAGSEC  VGDI FL
Sbjct: 15  IALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFL 74

Query: 162 VAHLKDDHKVDMHSGSTFNHRYVKSNPQEVENATWMLTVFSCFGHYFCLHFEAFQLGMAP 221
           VAHL+DDHKVDMH+G TFNHRYVKSNP+EVENATWMLTVF CFG YFCLHFEAFQLGMAP
Sbjct: 75  VAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAP 134

Query: 222 VYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNM 281
           VY+AFLRFMGD+++A+NY+YSLEVGG+GRK  W+G PRS+RDSHRKVRDS DGLIIQRNM
Sbjct: 135 VYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNM 194

Query: 282 ALFFSGGDRKELKLRVTGRIWKEQ 306
           ALFFSGGD+KELKLRVTGRIWKEQ
Sbjct: 195 ALFFSGGDKKELKLRVTGRIWKEQ 218

[Close]

BLAST of CmoCh18G008710 vs. NCBI nr
Match: gi|778706762|ref|XP_011655908.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Cucumis sativus])

HSP 1 Score: 624.4 bits (1609), Expect = 1.0e-175
Identity = 290/305 (95.08%), Postives = 298/305 (97.70%), Query Frame = 1


Query: 1   MSSANPYFDDVRTKPEVIDPPQDEDMMDVSESVSDPTRNGGKPNVAVSSSVRELLECPVC 60
           M+SANPYFDD+R KPEVIDPPQD+DMMDVSESVSDP R+GGKPNV VSSSVRELLECPVC
Sbjct: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPNV-VSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCTYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPC YQTF
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120

Query: 121 GCAGIYPYYSKLKHESQCAYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHSGSTFN 180
           GC GIYPYYSKLKHESQC YRPYNCPYAGSEC+V+GDIPFLV+HLKDDHKVDMH+GSTFN
Sbjct: 121 GCVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGHYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFG YFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 301 IWKEQ 304

[Close]

BLAST of CmoCh18G008710 vs. NCBI nr
Match: gi|659092182|ref|XP_008446940.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis melo])

HSP 1 Score: 624.4 bits (1609), Expect = 1.0e-175
Identity = 291/305 (95.41%), Postives = 297/305 (97.38%), Query Frame = 1


Query: 1   MSSANPYFDDVRTKPEVIDPPQDEDMMDVSESVSDPTRNGGKPNVAVSSSVRELLECPVC 60
           M+SANPYFDD+R KPEVIDPPQD+DMMDVSESVSDP R GGKPNV VSSSVRELLECPVC
Sbjct: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARAGGKPNV-VSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCTYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPC YQTF
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120

Query: 121 GCAGIYPYYSKLKHESQCAYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHSGSTFN 180
           GC GIYPYYSKLKHESQC YRPYNCPYAGSEC+V+GDIPFLVAHLKDDHKVDMH+GSTFN
Sbjct: 121 GCVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVAHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGHYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFG YFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 301 IWKEQ 304

[Close]

BLAST of CmoCh18G008710 vs. NCBI nr
Match: gi|802574062|ref|XP_012068638.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT5-like isoform X2 [Jatropha curcas])

HSP 1 Score: 610.9 bits (1574), Expect = 1.2e-171
Identity = 281/305 (92.13%), Postives = 294/305 (96.39%), Query Frame = 1


Query: 1   MSSANPYFDDVRTKPEVIDPPQDEDMMDVSESVSDPTRNGGKPNVAVSSSVRELLECPVC 60
           M+S NP+F+D+R+KPEVIDPPQ+EDMMDVSESV+DP +   KPNV VSSSVRELLECPVC
Sbjct: 1   MASGNPFFEDMRSKPEVIDPPQNEDMMDVSESVNDPAQMALKPNVTVSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCTYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPC YQ+F
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSF 120

Query: 121 GCAGIYPYYSKLKHESQCAYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHSGSTFN 180
           GC GIYPYYSKLKHESQC YRPYNCPYAGSECTV+GDIP+LVAHLKDDHKVDMH+GSTFN
Sbjct: 121 GCLGIYPYYSKLKHESQCVYRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGHYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNP EVENATWMLTVFSCFG YFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRKM+WQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKMIWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 301 IWKEQ 305

[Close]

BLAST of CmoCh18G008710 vs. NCBI nr
Match: gi|802574058|ref|XP_012068636.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT5-like isoform X1 [Jatropha curcas])

HSP 1 Score: 610.9 bits (1574), Expect = 1.2e-171
Identity = 281/305 (92.13%), Postives = 294/305 (96.39%), Query Frame = 1


Query: 1   MSSANPYFDDVRTKPEVIDPPQDEDMMDVSESVSDPTRNGGKPNVAVSSSVRELLECPVC 60
           M+S NP+F+D+R+KPEVIDPPQ+EDMMDVSESV+DP +   KPNV VSSSVRELLECPVC
Sbjct: 15  MASGNPFFEDMRSKPEVIDPPQNEDMMDVSESVNDPAQMALKPNVTVSSSVRELLECPVC 74

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCTYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPC YQ+F
Sbjct: 75  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSF 134

Query: 121 GCAGIYPYYSKLKHESQCAYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHSGSTFN 180
           GC GIYPYYSKLKHESQC YRPYNCPYAGSECTV+GDIP+LVAHLKDDHKVDMH+GSTFN
Sbjct: 135 GCLGIYPYYSKLKHESQCVYRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFN 194

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGHYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNP EVENATWMLTVFSCFG YFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 195 HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 254

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRKM+WQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 255 YSLEVGGNGRKMIWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 314

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 315 IWKEQ 319

[Close]

BLAST of CmoCh18G008710 vs. NCBI nr
Match: gi|1000979549|ref|XP_015570744.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT5 isoform X1 [Ricinus communis])

HSP 1 Score: 606.7 bits (1563), Expect = 2.3e-170
Identity = 278/305 (91.15%), Postives = 290/305 (95.08%), Query Frame = 1


Query: 1   MSSANPYFDDVRTKPEVIDPPQDEDMMDVSESVSDPTRNGGKPNVAVSSSVRELLECPVC 60
           M+S NP+FDD+R+KPEVIDPP  EDMMDV ESV+DP +   KPNV VSSSVRELLECPVC
Sbjct: 1   MASGNPFFDDLRSKPEVIDPPPSEDMMDVGESVNDPAQTAMKPNVTVSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCTYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPC Y +F
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYHSF 120

Query: 121 GCAGIYPYYSKLKHESQCAYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHSGSTFN 180
           GC GIYPYYSKLKHESQC YRPYNCPYAGSECTV+GDIP+LVAHLKDDHKVDMH+GSTFN
Sbjct: 121 GCVGIYPYYSKLKHESQCVYRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGHYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNP EVENATWMLTVFSCFG YFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNY+
Sbjct: 181 HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYT 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRKM+WQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKMIWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 306
           IWKEQ
Sbjct: 301 IWKEQ 305

The following BLAST results are available for this feature:

BLAST of CmoCh18G008710 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SINA5_ARATH	3.1e-135	77.16	E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2	[more]
SINA3_ARATH	1.2e-134	83.33	E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1	[more]
SINA4_ARATH	1.1e-132	81.13	E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1	[more]
SINA2_ARATH	2.3e-130	77.74	E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=1 SV=1	[more]
SINA1_ARATH	1.8e-127	75.81	Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE...	[more]

BLAST of CmoCh18G008710 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GCK0_CUCME	7.3e-176	95.41	E3 ubiquitin-protein ligase OS=Cucumis melo subsp. melo PE=3 SV=1	[more]
A0A0A0KRN7_CUCSA	7.3e-176	95.08	E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_5G623730 PE=3 SV=1	[more]
A0A067KWI1_JATCU	8.4e-172	92.13	E3 ubiquitin-protein ligase OS=Jatropha curcas GN=JCGZ_24516 PE=3 SV=1	[more]
B9RGC2_RICCO	1.6e-170	91.15	E3 ubiquitin-protein ligase OS=Ricinus communis GN=RCOM_1452850 PE=3 SV=1	[more]
A0A0A0KQG8_CUCSA	4.6e-170	91.15	E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_5G456720 PE=3 SV=1	[more]

BLAST of CmoCh18G008710 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61790.1	6.6e-136	83.33	Protein with RING/U-box and TRAF-like domains	[more]
AT4G27880.1	6.2e-134	81.13	Protein with RING/U-box and TRAF-like domains	[more]
AT3G58040.1	1.3e-131	77.74	seven in absentia of Arabidopsis 2	[more]
AT2G41980.1	1.0e-128	75.81	Protein with RING/U-box and TRAF-like domains	[more]
AT5G53360.1	3.5e-105	83.33	TRAF-like superfamily protein	[more]

BLAST of CmoCh18G008710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778706762\|ref\|XP_011655908.1\|	1.0e-175	95.08	PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Cucumis sativus]	[more]
gi\|659092182\|ref\|XP_008446940.1\|	1.0e-175	95.41	PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis melo]	[more]
gi\|802574062\|ref\|XP_012068638.1\|	1.2e-171	92.13	PREDICTED: E3 ubiquitin-protein ligase SINAT5-like isoform X2 [Jatropha curcas]	[more]
gi\|802574058\|ref\|XP_012068636.1\|	1.2e-171	92.13	PREDICTED: E3 ubiquitin-protein ligase SINAT5-like isoform X1 [Jatropha curcas]	[more]
gi\|1000979549\|ref\|XP_015570744.1\|	2.3e-170	91.15	PREDICTED: E3 ubiquitin-protein ligase SINAT5 isoform X1 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR004162	SINA-like
IPR008974	TRAF-like
IPR013010	Znf_SIAH
IPR013083	Znf_RING/FYVE/PHD
IPR013323	SIAH-type domain
IPR018121	7-in-absentia-prot_TRAF-dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding
GO:0004842	ubiquitin-protein transferase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006511	ubiquitin-dependent protein catabolic process
GO:0007275	multicellular organism development
GO:0016567	protein ubiquitination

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G008710.1	CmoCh18G008710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 57..93 score: 9
IPR004162	E3 ubiquitin-protein ligase SIN-like	PANTHER	PTHR10315	SEVEN IN ABSENTIA HOMOLOG	coord: 1..305 score: 1.9E
IPR008974	TRAF-like	GENE3D	G3DSA:2.60.210.10		coord: 176..302 score: 7.7
IPR008974	TRAF-like	unknown	SSF49599	TRAF domain-like	coord: 110..302 score: 4.18
IPR013010	Zinc finger, SIAH-type	PROFILE	PS51081	ZF_SIAH	coord: 110..170 score: 13
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 41..122 score: 1.
IPR013323	SIAH-type domain	GENE3D	G3DSA:3.90.890.10		coord: 123..165 score: 2.0
IPR018121	Seven-in-absentia protein, TRAF-like domain	PFAM	PF03145	Sina	coord: 99..298 score: 8.7
None	No IPR available	PANTHER	PTHR10315:SF29	SUBFAMILY NOT NAMED	coord: 1..305 score: 1.9E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 46..99 score: 6.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh18G008710	CmaCh18G008660	Cucurbita maxima (Rimu)	cmacmoB406
CmoCh18G008710	Csa5G623730	Cucumber (Chinese Long) v2	cmocuB405
CmoCh18G008710	CSPI05G27520	Wild cucumber (PI 183967)	cmocpiB410
CmoCh18G008710	Lsi04G000340	Bottle gourd (USVL1VR-Ls)	cmolsiB364
CmoCh18G008710	Cp4.1LG09g04450	Cucurbita pepo (Zucchini)	cmocpeB376
CmoCh18G008710	Carg20672	Silver-seed gourd	carcmoB0654

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh18G008710	Cucumber (Gy14) v2	cgybcmoB603
CmoCh18G008710	Melon (DHL92) v3.6.1	cmomedB395
CmoCh18G008710	Silver-seed gourd	carcmoB1135
CmoCh18G008710	Cucumber (Chinese Long) v3	cmocucB0487
CmoCh18G008710	Watermelon (97103) v2	cmowmbB407
CmoCh18G008710	Cucurbita moschata (Rifu)	cmocmoB336
CmoCh18G008710	Cucumber (Gy14) v1	cgycmoB0847
CmoCh18G008710	Cucurbita maxima (Rimu)	cmacmoB706
CmoCh18G008710	Wild cucumber (PI 183967)	cmocpiB411
CmoCh18G008710	Cucumber (Chinese Long) v2	cmocuB406
CmoCh18G008710	Melon (DHL92) v3.5.1	cmomeB344
CmoCh18G008710	Watermelon (Charleston Gray)	cmowcgB361
CmoCh18G008710	Watermelon (97103) v1	cmowmB368
CmoCh18G008710	Cucurbita pepo (Zucchini)	cmocpeB392