CmoCh18G008560 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCGGAAACGGAAATTTGACAGTAAAGCCCAAATTCATTGTTTAAAACCCACGAATTGTGCAGACCCAAAACTGAGTATCTGAAGTTCAGAGAGCTTTGAGAGTGACAACTATGGCGTCGGTAGGAGCAGCCGCAGGTGGAGGCGTAGAGTGGCATGTCAGGCCTCCTAACCCTAAGAATCCAATAGTTTTCTTCGACGTCACCATTGGCACTATTCCCGCTGGTCGTATCAAGATGGAGCTCTTCGCCGATATTGCTCCAAAAACCGCCGAGAATTTTCGGTATCCACACTGCTTTCTTCTGCTTGTTCTTCTTGTTATTCTTTAATGATCTTCGATTGCTGTGAAGCGATTTGAATCATTTACTAGTCGAAAGGGTTTTTTGTTGAAGTTTTAGCTTTGCTATGGAATATAAGTTTGCGTTAGCAGGAAGCCGGAGGTCTACTCTGCTCCGTTGCTCTATTAAAATCTACGGACAGCTCCATCGATTTTTCTAAAAATGAAAAAACTGATTTTCCTTGAGAAAAAAATAGAAGAATGCAAGGAAATACAAATCAAAGAGTTCACAAAAAAGTGAAGAAGAAGGGAAGCAAACTAAAGATTCATCGAGTTTAGCATGGGTGGAAATATCATATTTGTTTGTTAACTTGAATCCACGTTTGCTAATCGACCTGACGAATGGAAGCACCTTAGAAAGAAGATTATAAGTACCTTGAACTTGAACTCTCGTGGATTCAACTACTTTCTTCTCTTACCTCTATTTATATGTAACAATATTGCGTAGAATCATGTAGCTTTATGTATTTGTAACTATTTATGTCTTCCCCGAGACATTGCTTTCTCTTCTGTGTATTCAGTTTGTTTATTTAGCGTTACTTTTCCCATCTATTTCAGTCTCCTAATTTCGATTACTTTGTCTCTGACAGGCAGTTCTGCACCGGAGAATACAGGCAAGTAGAACTCTAAAACCAGAATTTTACAAGTATTTCTCTATTCGACCTAAAATAGGGTACTCTTTTTAAGTGTGAGGAAGTCATTTGAAATGGATAGTCTTTTTAGTATAATCTTGATAGAAAAAATCATGCTAGTGGTAGAACTTCTAGTGATCTTTTCTACTCATCTTCTAATGATTGTAACTATTTTAGAATTCTGTTAGTTCTATCTGCGTCAGCTTAGAGTTTAAAATGGTTTTGTTAACTAGTGTGAAATCTCAGCTACAGATTTCTGAAGAATCTATTGACTAAGAAATTCTAGTTTCATTCTTAAATTTGGGAAATTTTTGAGTTTTTTTTCCCCATTAAGGAACAATTGAACTTGTCACGTGTAAATATAGATAACATGCAAGAAGGCTATGATCCATTTCTTTTCCAAAAAAAAAAGATTTGCAACTGGTTAAACTTCGGAGTTAAAATATTAGGGAAACCTCTACGTACACAAGGTTTAGAGTTGAGAGTCGAAAGGGGCTTTGGGGTTAGCTTTACATTGAACTCCATCGTCTACCCTCTAGAGCTATTAAAATTACACTTTTTTTTTTGTTTCCACATGAACTATTGTGAGTCCAACGTCTCTTATAATATATTAATTTATTATTAAAATTTGTGGTCAACTTTTAAAGGTGGAAGTCTCCAATGCAAGCTCGTTTCATGTATGGTGAACTTATTTCAACATTTGGTCTCAATTGACAGGAAAGCTGGATTGCCTGTTGGTTATAAGGGATGCCAATTCCATAGAGTAATCAAGGATTTTATGATTCAAGCTGGTGACTTCGTCAAGGTAATCCAGTCTATTGGTCTGTTTAGGCAATGTAGGTATTAACTAATATGTGTATTATGTATTGATTATTATGTGCTGATGAGAACACTAAGTACCATCTATATCTTTAATTCTAGTATTCCGGCCCTTCGGTTAACTACAACAAGAATAGGAACATAGTTCTAAATTTCTTGTCTTGAAAGGAAAAGTGATCAAAATCTACCATTTTACAGTTATGTTTCTCCTGCTTTATCTTACTTTGAATCAAACTCTTCTGCTGTATATGATGATTGATCATTATAGTTTTCATTATTAAGGTTAATTCCCAGACAGAGATTACATTTGTCATTTCATTTAGGTTGAACACTTATTTTCATTGTCAGCATGGTTCCTTCCTGTTTTTTTTAATTTTTATTTTTTTATGTCGTTGTTTAAACATATCAACTTAGTCGTCTCTTTTTGTTTTAATGAAAATAAAGAAAACTCCCTCTACTCTGATTGCATCACTTTGTAGAGTGTTTCTTTACTCACTTTCACCTCATCATCTATAAGCATTTTCCGATCTCTTTGTTTTGCAGGGTGATGGCAGTGGATGTGTTTCCATTTACGGACATAAGTTTGAGGATGAAAATTTTGTTGCTAAGCACACTGGACCAGGTTTATTGTCAATGGTATGCTTTTCTATTGAAATGAGATTCAATGCTTTATATATGTTGTGTAATTGTACCTACGTTGCTTAATTTTATTCTCCGTAAATATTTGGCATGAGAGGAATAATGAGATTTTTAGGGAGAATGAGAAGTCGGGTGAAGAGATTTGGGTTGGAAGGTTGTTAGATTTCATGTTTCCTTGTGGTCGTTAGTCAATATTCTTTTTGTAATTATGGTATTGATCTTGTCTTTTATATGTCTTTGTATTTTTCCATTTTTTCAATGATCGTTCGGTTTCTTCCCAAAAAAAAAAAAACAAAAAAGAAAGAGCAGAAGAAAATACTATATTCACTGTAAAATTATGAATTTTGCACGGATGATAATATCGTCAGCAAATTAAACCTTCTGCCATCATAGTATTAAAGGTCTTTGAATCCTAATGGCTTTGATGTTAAGGGCAGGATGTTTGGAGATTCTCTCCAAAGTCCTAACAGTAAGTCTGTAGATGGAGAACTGTTGGCAGGGTGGAAAATTTATTCTTCATCCGTTTTTGTACTCGTTTATCGACTTAACACTGTGTTTCTTTAGATTGAGGTCTTAGGTAATAAATTCTACTCTACTAGTGGAAAAATCTCTGATGCTAGTAGATTAATTATCCACCATGTTTGTTTGTCAAATAATTGATATGCAAGTACAGATTTGCTTATGTTTTAGAGTATTATGTTTAGAAGGTCACTATTCACTATTTTTTTAATCTAGTGTTGTCATTGTATAATTCTTACTTACCATGATGTCTGCTTCTTCTACAGGCAAATAGTGGGCCTGGGACAAATGGATGTCAGGTACTTCAATAACGTTGCTGTCTCTCTCTCTCTCTCTCACACACACACACACATACACACACCCCTTCTTCCGGAATAAGTTCTATTTTCCAAAGAACTTAAATTTTTTGTCTCATAAAAAAAGAGTTTAAAACCTTTCAAGGATGGTAGTCTTTCAACTCTACTAAACAATTGGGTTTCTTTGTTGTAATCCACCTTTGATGACTCCTCATTTCATTCATCAATGAAATATCTTGATTACAATTTTCTCACGCTTTTGTACGTTTGTGTATGTGTTCAGAGTTATTTTGATGAGAGATGAATTGAACCTCCAGTCTTCCACATAGTTCCTACTTCTTTCTAATTTCCAATTTTATATCAGTATCAGAAAACATCCACACATGCTTTCTGGCCATTCTGATAAGAGATCTAATATAGATTTTAGAAGTTGGAACAATAATTTGTATTTCAACAGTCACAGATGGTGAATAACTATCTTTGATATGTTATGCCATAGTATTAAAGACGGTCTATATGATTTGTGCTGATGGGCATCTTTGTTAAAGCTGCTTTTACGTCATTTGGAATGGTAATTATTTTGTTCTTATAGTGATCGCGTTTTGCTGCAGTTCTTCCTTACTTGTGCCAAATGTGATTGGCTCGACAACAAGCACGTGGTGTTTGGGGTATGCTTCTAGTCCTTCAACCTTGTTGTTGCATATTATAATGATAACATATATGATATTTGAAAACGTAAAATTATCTGGTTGATGAGACTCATTGCTTAAATTTTTCCTGAGTCAATCCCTTGGGATGATTCATTGGAGGGAAACATCTCATTATTGTGATTTTTGAATTAAACATACCTCGAGATGTGTTCCCAACCCCCCAGAATGGAATGTTTCTAGCACTACCATAATCATCCACCGCTAATATCCCTCTGCAATCTAACGTACATGTTTTGCTGCTTGGAGAAATCCCAATTGAGGCTTCTGTGTTCATATCACTTTGATGCACCAAAATTCCGTTGATCCCTTCCCTTTCGTGGGAATCTGTAAACCAAATGATTCCTTGGGATTTTAACTTGTAACGTTTCTATACCATCACAAGTGTAAATTCTGAGTGCTAGATCAAAAACGGCCCTAAGAAGCTCAATGTGAACGCTTGCCTGGTTTTAATTGATCAGTTGACTAATGATAATTGAAATTGTGCATGTGTATTTTTCGCTTGCTTCCATGTTTATGTTTAAAATATTTAAGAATAAAAATACTTAAATATTTTAGAAAAAAGATTTAGATATTTTAGAAAAAAGATTTAGATATTTTAGGAGAAAAATTTAGATATTTGAGGAATAGATTGCGTAGCCTATACTATAAATACCTCTCCACTCTCTACGTAGCTCTGCATCCCAAAAAATACAAAGCACAGAATGTAGTAGTACCAAATGTCTTGTAATCTCTTCTCGATTGATGTTAATAAAAAGTGCTGAGTGTTTTCCACAAAAAGTTGTGTTCAACATGATATGTTTGTGTTCCTTGTCTTCATAGTTGTTCTCATCCCTGCATATTCTTTAATCATATTCAGTCGATTATGTTATGTTACTTATTAGAGATGTTTATAAGACGAGATGACTACTTTCCTAGCTTCATTTTGTAGTCTAGGCAGGAATTCTCGAATTTTGTCGTTTTTTATTTTCTGCTCCTAGGGTGCTAGTCTTATCATCTCTGTGGTGGTTTTTGCAGAGGGTACTGGGTGACGGCCTTTTGGTTGTCAGGAAGATTGAAAATGTAGCTACTGGCCCTAACAACCGACCAAAACTGGCTTGCGTTATCGCTGAATGTGGTGAAATGTAAAACTTGAGTTACACACTTCTACTCTGTTGCCCAAAATGTATACTTCTCTAATTGTCATTATAGAGTTTAACTTCCCTGCCAGTTTCTGCTGAAATGGAAAGCAGACCATGCTTTTTAAGGATGTGAATCTGTTCAATACAATGTGCCTTAGGTCCTTGATAGCATTTCGGACGTGTTGTCGGTGGGTGCATGTCAGTTATAACTCCCTTTTTTACCAAGCTTTCATTACGTCTTTCCTTTAGCATAGTTGTTTATTTTCTTTGTATTATGTAGGCGTACTCTCCTTCCTACCTTCCTACTTGAGTTATATGCTATGATCCTACTTGAGTTATATGCTACGAGTGTTGTTCTCGTCTCTATTTGCTTGCTAGCTTGCAACAAATGTTTTTTTAACGGTTTTCAAAACTTTTTCTCTAATTCC GCCGGAAACGGAAATTTGACAGTAAAGCCCAAATTCATTGTTTAAAACCCACGAATTGTGCAGACCCAAAACTGAGTATCTGAAGTTCAGAGAGCTTTGAGAGTGACAACTATGGCGTCGGTAGGAGCAGCCGCAGGTGGAGGCGTAGAGTGGCATGTCAGGCCTCCTAACCCTAAGAATCCAATAGTTTTCTTCGACGTCACCATTGGCACTATTCCCGCTGGTCGTATCAAGATGGAGCTCTTCGCCGATATTGCTCCAAAAACCGCCGAGAATTTTCGGCAGTTCTGCACCGGAGAATACAGGAAAGCTGGATTGCCTGTTGGTTATAAGGGATGCCAATTCCATAGAGTAATCAAGGATTTTATGATTCAAGCTGGTGACTTCGTCAAGGGTGATGGCAGTGGATGTGTTTCCATTTACGGACATAAGTTTGAGGATGAAAATTTTGTTGCTAAGCACACTGGACCAGGTTTATTGTCAATGGCAAATAGTGGGCCTGGGACAAATGGATGTCAGTTCTTCCTTACTTGTGCCAAATGTGATTGGCTCGACAACAAGCACGTGGTGTTTGGGAGGGTACTGGGTGACGGCCTTTTGGTTGTCAGGAAGATTGAAAATGTAGCTACTGGCCCTAACAACCGACCAAAACTGGCTTGCGTTATCGCTGAATGTGGTGAAATGTAAAACTTGAGTTACACACTTCTACTCTGTTGCCCAAAATGTATACTTCTCTAATTGTCATTATAGAGTTTAACTTCCCTGCCAGTTTCTGCTGAAATGGAAAGCAGACCATGCTTTTTAAGGATGTGAATCTGTTCAATACAATGTGCCTTAGGTCCTTGATAGCATTTCGGACGTGTTGTCGGTGGGTGCATGTCAGTTATAACTCCCTTTTTTACCAAGCTTTCATTACGTCTTTCCTTTAGCATAGTTGTTTATTTTCTTTGTATTATGTAGGCGTACTCTCCTTCCTACCTTCCTACTTGAGTTATATGCTATGATCCTACTTGAGTTATATGCTACGAGTGTTGTTCTCGTCTCTATTTGCTTGCTAGCTTGCAACAAATGTTTTTTTAACGGTTTTCAAAACTTTTTCTCTAATTCC ATGGCGTCGGTAGGAGCAGCCGCAGGTGGAGGCGTAGAGTGGCATGTCAGGCCTCCTAACCCTAAGAATCCAATAGTTTTCTTCGACGTCACCATTGGCACTATTCCCGCTGGTCGTATCAAGATGGAGCTCTTCGCCGATATTGCTCCAAAAACCGCCGAGAATTTTCGGCAGTTCTGCACCGGAGAATACAGGAAAGCTGGATTGCCTGTTGGTTATAAGGGATGCCAATTCCATAGAGTAATCAAGGATTTTATGATTCAAGCTGGTGACTTCGTCAAGGGTGATGGCAGTGGATGTGTTTCCATTTACGGACATAAGTTTGAGGATGAAAATTTTGTTGCTAAGCACACTGGACCAGGTTTATTGTCAATGGCAAATAGTGGGCCTGGGACAAATGGATGTCAGTTCTTCCTTACTTGTGCCAAATGTGATTGGCTCGACAACAAGCACGTGGTGTTTGGGAGGGTACTGGGTGACGGCCTTTTGGTTGTCAGGAAGATTGAAAATGTAGCTACTGGCCCTAACAACCGACCAAAACTGGCTTGCGTTATCGCTGAATGTGGTGAAATGTAA
BLAST of CmoCh18G008560 vs. Swiss-Prot
Match: CYP22_ARATH (Peptidyl-prolyl cis-trans isomerase CYP22 OS=Arabidopsis thaliana GN=CYP22 PE=2 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 2.6e-100 Identity = 164/190 (86.32%), Postives = 176/190 (92.63%), Query Frame = 1
BLAST of CmoCh18G008560 vs. Swiss-Prot
Match: PPIH_HUMAN (Peptidyl-prolyl cis-trans isomerase H OS=Homo sapiens GN=PPIH PE=1 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 3.8e-75 Identity = 125/172 (72.67%), Postives = 146/172 (84.88%), Query Frame = 1
BLAST of CmoCh18G008560 vs. Swiss-Prot
Match: PPIH_BOVIN (Peptidyl-prolyl cis-trans isomerase H OS=Bos taurus GN=PPIH PE=2 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 3.8e-75 Identity = 125/172 (72.67%), Postives = 146/172 (84.88%), Query Frame = 1
BLAST of CmoCh18G008560 vs. Swiss-Prot
Match: PPIH_RHIO9 (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=cyp7 PE=3 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 2.3e-72 Identity = 120/171 (70.18%), Postives = 144/171 (84.21%), Query Frame = 1
BLAST of CmoCh18G008560 vs. Swiss-Prot
Match: CYP11_CAEEL (Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorhabditis elegans GN=cyn-11 PE=2 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 2.6e-71 Identity = 121/172 (70.35%), Postives = 140/172 (81.40%), Query Frame = 1
BLAST of CmoCh18G008560 vs. TrEMBL
Match: A0A0A0KTS1_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_5G624450 PE=3 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 8.8e-111 Identity = 187/191 (97.91%), Postives = 188/191 (98.43%), Query Frame = 1
BLAST of CmoCh18G008560 vs. TrEMBL
Match: V4SDK8_9ROSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina GN=CICLE_v10002356mg PE=3 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 3.8e-106 Identity = 177/191 (92.67%), Postives = 182/191 (95.29%), Query Frame = 1
BLAST of CmoCh18G008560 vs. TrEMBL
Match: A0A059BJM7_EUCGR (Peptidyl-prolyl cis-trans isomerase OS=Eucalyptus grandis GN=EUGRSUZ_G032152 PE=3 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 5.0e-106 Identity = 174/183 (95.08%), Postives = 182/183 (99.45%), Query Frame = 1
BLAST of CmoCh18G008560 vs. TrEMBL
Match: A0A061FRN5_THECC (Peptidyl-prolyl cis-trans isomerase OS=Theobroma cacao GN=TCM_045023 PE=3 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 8.5e-106 Identity = 176/191 (92.15%), Postives = 183/191 (95.81%), Query Frame = 1
BLAST of CmoCh18G008560 vs. TrEMBL
Match: A0A0D2VPR5_GOSRA (Peptidyl-prolyl cis-trans isomerase OS=Gossypium raimondii GN=B456_011G218600 PE=3 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 8.5e-106 Identity = 175/191 (91.62%), Postives = 184/191 (96.34%), Query Frame = 1
BLAST of CmoCh18G008560 vs. TAIR10
Match: AT2G38730.1 (AT2G38730.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 365.9 bits (938), Expect = 1.5e-101 Identity = 164/190 (86.32%), Postives = 176/190 (92.63%), Query Frame = 1
BLAST of CmoCh18G008560 vs. TAIR10
Match: AT2G21130.1 (AT2G21130.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 209.1 bits (531), Expect = 2.3e-54 Identity = 101/171 (59.06%), Postives = 125/171 (73.10%), Query Frame = 1
BLAST of CmoCh18G008560 vs. TAIR10
Match: AT3G56070.1 (AT3G56070.1 rotamase cyclophilin 2) HSP 1 Score: 208.8 bits (530), Expect = 3.0e-54 Identity = 101/171 (59.06%), Postives = 121/171 (70.76%), Query Frame = 1
BLAST of CmoCh18G008560 vs. TAIR10
Match: AT3G62030.2 (AT3G62030.2 rotamase CYP 4) HSP 1 Score: 208.0 bits (528), Expect = 5.2e-54 Identity = 98/166 (59.04%), Postives = 119/166 (71.69%), Query Frame = 1
BLAST of CmoCh18G008560 vs. TAIR10
Match: AT2G16600.1 (AT2G16600.1 rotamase CYP 3) HSP 1 Score: 203.4 bits (516), Expect = 1.3e-52 Identity = 100/171 (58.48%), Postives = 121/171 (70.76%), Query Frame = 1
BLAST of CmoCh18G008560 vs. NCBI nr
Match: gi|778706895|ref|XP_011655929.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP22 isoform X1 [Cucumis sativus]) HSP 1 Score: 407.5 bits (1046), Expect = 1.3e-110 Identity = 187/191 (97.91%), Postives = 188/191 (98.43%), Query Frame = 1
BLAST of CmoCh18G008560 vs. NCBI nr
Match: gi|659092259|ref|XP_008446980.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase H [Cucumis melo]) HSP 1 Score: 407.5 bits (1046), Expect = 1.3e-110 Identity = 187/191 (97.91%), Postives = 188/191 (98.43%), Query Frame = 1
BLAST of CmoCh18G008560 vs. NCBI nr
Match: gi|1009153614|ref|XP_015894728.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP22 [Ziziphus jujuba]) HSP 1 Score: 398.7 bits (1023), Expect = 5.9e-108 Identity = 181/191 (94.76%), Postives = 186/191 (97.38%), Query Frame = 1
BLAST of CmoCh18G008560 vs. NCBI nr
Match: gi|567879729|ref|XP_006432423.1| (hypothetical protein CICLE_v10002356mg [Citrus clementina]) HSP 1 Score: 392.1 bits (1006), Expect = 5.5e-106 Identity = 177/191 (92.67%), Postives = 182/191 (95.29%), Query Frame = 1
BLAST of CmoCh18G008560 vs. NCBI nr
Match: gi|702425661|ref|XP_010067714.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP22 [Eucalyptus grandis]) HSP 1 Score: 391.7 bits (1005), Expect = 7.2e-106 Identity = 174/183 (95.08%), Postives = 182/183 (99.45%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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