CmoCh18G006750 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh18G006750
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Pollen Ole e 1 allergen and extensin family protein, putative
Location	Cmo_Chr18 : 8617361 .. 8619021 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCTTACTTTTAGCACTAATCAATGGCTTCTCTTAAGCTCTTCATTATTGCTTTTCTCTTGTTCATAGTTCTTGCAAGAACTCAACTTGCACAATGCAACACTTTGAAGGCCAGCATCTCTTGCCTTGATTGTCAATCCAACTATGATTTCTCAGGTCTTTGCAACCTTTTGACTTACGTTTCGTTTTTATTTCGTGTTGTTTGTATCGTGTTTTGTGAGATTCCATGTTGTTAGAGAGAAGAACTGAACATTTCTTATAAAGGTGTGGAAACCTCTCTCTAGTAGACACGTTTTAAAAATGTTGAGGGAGAGTCTAAAAAAGAGTCTATTAAGGGTGGATTTGGACTGTTACAAATGATATTAGAGCCTAGCACCGAGCGGTGTGCTAGTGAGCACACTAGGCCTCCAAAGGGGCGGGTGTGGAAACCTCTTACTCGTTGCCGCGTTTTAAAACCTTGAGAGGAAGCCCAAAGTGTGGAAACCTCCCCCTAGTACACGAATTTTAAAACTTTGAGGAAAAGCTCAAATAGGACAATATCTGCTAGTAATGGACTTGGACTGTTACAAAGGTAGTAGAGCCAAGCACCTAGCGGTCGACTAGTGAGGACGCTGGGTCCCAAGGGGGTGGGTGTGGAAGCCTTTCTATGGCAAACACGTTTTAAAACCTTGAGGGGAAGCCTAAAAGAAAAAACCCAAAAAGGATACTATCAGCTAGCTGTGAGCTTGGATTAATGTAAATGGTATCAGGACTAGAAATTGGACAGTGTGCCAGCCAGGACACACCCTGGACTGATATAAATGGTATAAGAACCATATTTTGGGCAGTGTGCCAGCTAGGACACTGGCACTAAAGGAGTTAGATGTGGAAACCTCTCCATAATAGACGAGGAAAAGCCCAAAGAAAACAACATCAGCTAACGATGGGCTTAGACTATTATATGTTTCTACAAGGAAAAACAAAAATTTATATGATAACTACTTAATGAACTCGTAGTATTTAAACAATTAAAAGTGTTTTTGAACCGTTAAAAAGTTTCTAAAAATGATTTATTTTTCTTTCAGGAAACATGGTCGAAGTAAACTGCAAGAACGTAAAGAACCTAAGCATTGCAATTACCGAAGCGAATGGATCATTCAAAACTACGCTTCCTTCCAACGCAGCCTCCGATGACTCCGAAACAGCTCCATCCAACTGCATAGCCAAGCTTATTGGGGGACCTCACCAGCTCTATGCTTCAAGGAAAGGCATGGCTTCCAGAGTCATCAAGGGAACCAACTCCAACTTCTTCACCCTTGCCAATGCTCTCACCTTCTCCACATGCAAACATAACACAAAGTGCTTATCCATCAAAAATTTTGTTGCTGATTCAAAGACCATTGATTTACCTCTGCCACCTGAGTGGGGCTTTCCACCTACAAGTTACTATTTTCCTGTGCTTCCCATCATAGGCATTCCTTGAAAGTGGTCGAGAGATTTGAATCTCGGAGCTCGTAAGAAAGTATAAGTGTTTTAGCATCGTGTTATATTCATGTTTAAGTAATATGATTAAGTGTTGTAGTTTAAATACGTTTGTAACCATGGAAAAGATGAATTATATATACTTGTTATTAATATATATGGTTGTCGGAATCTTCCCGAGATTTTCCACAAGTTGCCAA

mRNA sequence

GTTCTTACTTTTAGCACTAATCAATGGCTTCTCTTAAGCTCTTCATTATTGCTTTTCTCTTGTTCATAGTTCTTGCAAGAACTCAACTTGCACAATGCAACACTTTGAAGGCCAGCATCTCTTGCCTTGATTGTCAATCCAACTATGATTTCTCAGGAAACATGGTCGAAGTAAACTGCAAGAACGTAAAGAACCTAAGCATTGCAATTACCGAAGCGAATGGATCATTCAAAACTACGCTTCCTTCCAACGCAGCCTCCGATGACTCCGAAACAGCTCCATCCAACTGCATAGCCAAGCTTATTGGGGGACCTCACCAGCTCTATGCTTCAAGGAAAGGCATGGCTTCCAGAGTCATCAAGGGAACCAACTCCAACTTCTTCACCCTTGCCAATGCTCTCACCTTCTCCACATGCAAACATAACACAAAGTGCTTATCCATCAAAAATTTTGTTGCTGATTCAAAGACCATTGATTTACCTCTGCCACCTGAGTGGGGCTTTCCACCTACAAGTTACTATTTTCCTGTGCTTCCCATCATAGGCATTCCTTGAAAGTGGTCGAGAGATTTGAATCTCGGAGCTCGTAAGAAAGTATAAGTGTTTTAGCATCGTGTTATATTCATGTTTAAGTAATATGATTAAGTGTTGTAGTTTAAATACGTTTGTAACCATGGAAAAGATGAATTATATATACTTGTTATTAATATATATGGTTGTCGGAATCTTCCCGAGATTTTCCACAAGTTGCCAA

Coding sequence (CDS)

ATGGCTTCTCTTAAGCTCTTCATTATTGCTTTTCTCTTGTTCATAGTTCTTGCAAGAACTCAACTTGCACAATGCAACACTTTGAAGGCCAGCATCTCTTGCCTTGATTGTCAATCCAACTATGATTTCTCAGGAAACATGGTCGAAGTAAACTGCAAGAACGTAAAGAACCTAAGCATTGCAATTACCGAAGCGAATGGATCATTCAAAACTACGCTTCCTTCCAACGCAGCCTCCGATGACTCCGAAACAGCTCCATCCAACTGCATAGCCAAGCTTATTGGGGGACCTCACCAGCTCTATGCTTCAAGGAAAGGCATGGCTTCCAGAGTCATCAAGGGAACCAACTCCAACTTCTTCACCCTTGCCAATGCTCTCACCTTCTCCACATGCAAACATAACACAAAGTGCTTATCCATCAAAAATTTTGTTGCTGATTCAAAGACCATTGATTTACCTCTGCCACCTGAGTGGGGCTTTCCACCTACAAGTTACTATTTTCCTGTGCTTCCCATCATAGGCATTCCTTGA

Homology

[Close]

BLAST of CmoCh18G006750 vs. TrEMBL
Match: A0A0A0LYA1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G165730 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.4e-57
Identity = 124/179 (69.27%), Postives = 143/179 (79.89%), Query Frame = 1


Query: 1   MASLKLFIIAFLLFIVL-ARTQLAQCNTLKASISCLDCQSNYDFSGNMVEVNCKNVKNLS 60
           MASLKLFI  F +FIVL A TQ AQCNTLKA ISCLDCQSNYDFSGN++ V C+  KNL+
Sbjct: 1   MASLKLFISPFFMFIVLIASTQRAQCNTLKAKISCLDCQSNYDFSGNLIMVKCERAKNLT 60

Query: 61  IAITEANGSFKTTLPSNAASDDSETAPSNCIAKLIGGPHQLYASRKGMASRVIKGTNSNF 120
           IAIT+A+GSF+T+LPSN AS+ + ++P  CIAKL+GG HQL+ASRK M S +IK TNS F
Sbjct: 61  IAITKADGSFETSLPSNMASEAAPSSP-KCIAKLLGGSHQLFASRKEMVSTIIKETNSKF 120

Query: 121 FTLANALTFSTCKH-NTKCLSI-KNFVADSKTIDLPLPPEWGFPPTSYYFPVLPIIGIP 177
           FT+A AL FSTCK  +  C +I K  V DSKT D PLPPEWGFPPTSYY PVLPIIGIP
Sbjct: 121 FTIATALKFSTCKEISRNCKAIKKESVEDSKTFDFPLPPEWGFPPTSYYIPVLPIIGIP 178

[Close]

BLAST of CmoCh18G006750 vs. TrEMBL
Match: V7BZI2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G122600g PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 7.7e-37
Identity = 83/172 (48.26%), Postives = 109/172 (63.37%), Query Frame = 1


Query: 8   IIAFLLFIVLARTQLAQCNTLKASISCLDCQSNYDFSGNMVEVNCKNVKNLSIAITEANG 67
           I A L  + +AR   + C TL+  +SC DC  NYDFSG M+ V C+ VKNL++AITE  G
Sbjct: 7   ITALLFALTMARIIPSACQTLEGKVSCTDCTHNYDFSGIMISVKCEGVKNLAMAITEEKG 66

Query: 68  SFKTTLPSNAASDDSETAPSNCIAKLIGGPHQLYASRKGMASRVIKGTNSNFFTLANALT 127
            FK  LP     D ++    NC+ KL+GGP+ LYA++K   S ++KG   N +T++  L+
Sbjct: 67  FFKVDLP----RDHTKPPSVNCVVKLLGGPNHLYATKKNKVSEIVKGKEKNTYTISTPLS 126

Query: 128 FST-CKHNTKCLSIKNFVADSKTIDLPLPPEWGFPPTSYY--FPVLPIIGIP 177
           F T C  NT+C + KN    SKT+D PLPPEWG  P+SYY  FP  PIIGIP
Sbjct: 127 FLTSCPQNTECKATKNQFGSSKTLDFPLPPEWGLAPSSYYLPFPFYPIIGIP 174

[Close]

BLAST of CmoCh18G006750 vs. TrEMBL
Match: A0A0L9UNC2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g166700 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.0e-36
Identity = 83/171 (48.54%), Postives = 108/171 (63.16%), Query Frame = 1


Query: 8   IIAFLLFIVLARTQLAQCNTLKASISCLDCQSNYDFSGNMVEVNCKNVKNLSIAITEANG 67
           I A LL + + R + + C T++A +SC DC +NYDFSG MV V C+ VK L+ A TE  G
Sbjct: 7   ITALLLALTMLRIRPSACQTVEAKVSCTDCSNNYDFSGIMVSVKCEGVKKLATATTEEKG 66

Query: 68  SFKTTLPSNAASDDSETAPS-NCIAKLIGGPHQLYASRKGMASRVIKGTNSNFFTLANAL 127
            FK  LP      D   APS  C+ KL+GGP+ LYA++K   S ++KG   N +T++  L
Sbjct: 67  FFKVDLPR-----DHGKAPSVKCLVKLLGGPNHLYATKKNQVSEIVKGKEKNTYTISTPL 126

Query: 128 TF-STCKHNTKCLSIKNFVADSKTIDLPLPPEWGFPPTSYYFPVLPIIGIP 177
           +F  +C  N +C    N  + SKT+DLPLPPEWG  PTSYY P LPIIGIP
Sbjct: 127 SFLRSCPKNRECKVADNQFSSSKTLDLPLPPEWGLAPTSYYLPFLPIIGIP 172

[Close]

BLAST of CmoCh18G006750 vs. TrEMBL
Match: A0A0S3SH23_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G075600 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.0e-36
Identity = 83/171 (48.54%), Postives = 108/171 (63.16%), Query Frame = 1


Query: 8   IIAFLLFIVLARTQLAQCNTLKASISCLDCQSNYDFSGNMVEVNCKNVKNLSIAITEANG 67
           I A LL + + R + + C T++A +SC DC +NYDFSG MV V C+ VK L+ A TE  G
Sbjct: 7   ITALLLALTMLRIRPSACQTVEAKVSCTDCSNNYDFSGIMVSVKCEGVKKLATATTEEKG 66

Query: 68  SFKTTLPSNAASDDSETAPS-NCIAKLIGGPHQLYASRKGMASRVIKGTNSNFFTLANAL 127
            FK  LP      D   APS  C+ KL+GGP+ LYA++K   S ++KG   N +T++  L
Sbjct: 67  FFKVDLPR-----DHGKAPSVKCLVKLLGGPNHLYATKKNQVSEIVKGKEKNTYTISTPL 126

Query: 128 TF-STCKHNTKCLSIKNFVADSKTIDLPLPPEWGFPPTSYYFPVLPIIGIP 177
           +F  +C  N +C    N  + SKT+DLPLPPEWG  PTSYY P LPIIGIP
Sbjct: 127 SFLRSCPKNRECKVADNQFSSSKTLDLPLPPEWGLAPTSYYLPFLPIIGIP 172

[Close]

BLAST of CmoCh18G006750 vs. TrEMBL
Match: A5BY12_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00760 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.0e-36
Identity = 85/171 (49.71%), Postives = 115/171 (67.25%), Query Frame = 1


Query: 8   IIAFLLF-IVLARTQLAQCNTLKASISCLDCQSNYDFSGNMVEVNCKNVKNLSIAITEAN 67
           +IA L F +VLA   L+ C+ +K S++CLDC  ++DFSG  V V C  VK L++A TEA+
Sbjct: 6   VIAPLFFALVLATIDLSTCHVMKGSVTCLDCHRHHDFSGIKVLVKCDRVKKLAMATTEAD 65

Query: 68  GSFKTTLPSNAASDDSETAPSNCIAKLIGGPHQLYASRKGMASRVIKGTNSNFFTLANAL 127
           GSFKT LPS+     + + P NC+AKL+GGP+QLYA RK   S+++K  + + +T++  L
Sbjct: 66  GSFKTNLPSDT---QTSSPPLNCLAKLLGGPNQLYAFRKNTVSKIVKARDDSSYTISTPL 125

Query: 128 TFS-TCKHNTKCLSIKNFVADSKTIDLPLPPEWGFPPTSYYFPVLPIIGIP 177
           +FS TC  + K      F   SKT+DLPLPPEWG  P+SYY P  PIIGIP
Sbjct: 126 SFSTTCPSSVKGAKYGEF-GSSKTVDLPLPPEWGLAPSSYYIPFFPIIGIP 172

[Close]

BLAST of CmoCh18G006750 vs. TAIR10
Match: AT5G22430.1 (AT5G22430.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 107.5 bits (267), Expect = 8.8e-24
Identity = 67/170 (39.41%), Postives = 94/170 (55.29%), Query Frame = 1


Query: 10  AFLLFI--VLARTQLAQCNTLKASISCLDCQSNYDFSGNMVEVNCKNVKNLSIAITEANG 69
           AF LF   V +  +L+  + +   ISCLDC  ++DFSG  V + C   K    A+  A+G
Sbjct: 9   AFFLFALAVFSNLELSASSLVSGKISCLDCHRDFDFSGIKVLLKCDGEKKQITAVAAADG 68

Query: 70  SFKTTLPSNAASDDSETAPSNCIAKLIGGPHQLYASRKGMASRVIKGT-NSNFFTLANAL 129
           SF++ LP+       +    NC+AKL+GGP QLYA +  + S ++K   +S   T +N L
Sbjct: 69  SFRSVLPT-----ADKKGSINCLAKLLGGPEQLYAHKHNLVSELVKSKHDSKVLTTSNPL 128

Query: 130 TFSTCKHNTKCLSIKNFVADSKTIDLPLPPEWGFPPTSYYFPVLPIIGIP 177
            FS          I + + DSKTI+ P    +GFPP S +FP LPIIGIP
Sbjct: 129 AFSLSCPKPSRDDIGSMIGDSKTINFPGAGGFGFPPAS-FFPFLPIIGIP 172

[Close]

BLAST of CmoCh18G006750 vs. TAIR10
Match: AT2G27385.1 (AT2G27385.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-22
Identity = 62/176 (35.23%), Postives = 88/176 (50.00%), Query Frame = 1


Query: 1   MASLKLFIIAFLLFIVLARTQLAQCNTLKASISCLDCQSNYDFSGNMVEVNCKNVKNLSI 60
           MA    F+  FL    L+   +   + ++  +SC DC ++YD+SG  V V+C +      
Sbjct: 12  MALRSHFLAVFLFSATLSSCLVVSASLVEGKVSCFDCPNDYDYSGITVGVSCSHTNTRFT 71

Query: 61  AITEANGSFKTTLPSNAASDDSETAPSNCIAKLIGGPHQLYASRKGMASRVIKGTNSNFF 120
             T+  G F + LPS   S        NC A+L G   QLYAS+  + S+++K     + 
Sbjct: 72  VTTDKKGDFISELPSKIES--------NCEAELQGSVKQLYASKNNVKSKIVKLGGDKYG 131

Query: 121 TLANALTFSTCKHNTKCLSIKNFVADSKTIDLPLPPEWGFPPTSYYFPVLPIIGIP 177
             +      +C  +    S       SKT+DLP+PPEWG  PTSYY P LPIIGIP
Sbjct: 132 LSSKLFFLKSCPRSFGSFS------SSKTVDLPVPPEWGLAPTSYYVPFLPIIGIP 173

[Close]

BLAST of CmoCh18G006750 vs. NCBI nr
Match: gi|659071656|ref|XP_008461260.1| (PREDICTED: uncharacterized protein LOC103499896 [Cucumis melo])

HSP 1 Score: 238.4 bits (607), Expect = 9.3e-60
Identity = 129/181 (71.27%), Postives = 145/181 (80.11%), Query Frame = 1


Query: 1   MASLKLFIIAFLLFIVLARTQLAQCNTLKASISCLDCQSNYDFSGNMVEVNCKNVKNLSI 60
           MASLKLFI    LF+VLA TQLAQCNTLKA ISCLDCQSNYDFSGN++ V C+ VKNL+I
Sbjct: 4   MASLKLFIFPIFLFMVLASTQLAQCNTLKAKISCLDCQSNYDFSGNLIMVKCERVKNLTI 63

Query: 61  AITEANGSFKTTLPSNAASDDSETA--PSNCIAKLIGGPHQLYASRKGMASRVIKGTNSN 120
           AIT+A+GSF+T LPS+ AS DSE A  P  CIAKL+GG HQL+ASRK + S +IK TNS 
Sbjct: 64  AITKADGSFETPLPSDMASVDSEAAPPPPKCIAKLVGGSHQLFASRKELVSTIIKETNSK 123

Query: 121 FFTLANALTFSTCKH-NTKCLSI-KNFVADSKTIDLP-LPPEWGFPPTSYYFPVLPIIGI 177
           FFT+A AL FSTCK  N KC +I K  + DSKT DLP LPPEWGFPPTSYY PVLPIIGI
Sbjct: 124 FFTIATALRFSTCKEINRKCKAIKKESIEDSKTFDLPNLPPEWGFPPTSYYLPVLPIIGI 183

[Close]

BLAST of CmoCh18G006750 vs. NCBI nr
Match: gi|449443456|ref|XP_004139493.1| (PREDICTED: uncharacterized protein LOC101207654 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 1.9e-57
Identity = 124/179 (69.27%), Postives = 143/179 (79.89%), Query Frame = 1


Query: 1   MASLKLFIIAFLLFIVL-ARTQLAQCNTLKASISCLDCQSNYDFSGNMVEVNCKNVKNLS 60
           MASLKLFI  F +FIVL A TQ AQCNTLKA ISCLDCQSNYDFSGN++ V C+  KNL+
Sbjct: 1   MASLKLFISPFFMFIVLIASTQRAQCNTLKAKISCLDCQSNYDFSGNLIMVKCERAKNLT 60

Query: 61  IAITEANGSFKTTLPSNAASDDSETAPSNCIAKLIGGPHQLYASRKGMASRVIKGTNSNF 120
           IAIT+A+GSF+T+LPSN AS+ + ++P  CIAKL+GG HQL+ASRK M S +IK TNS F
Sbjct: 61  IAITKADGSFETSLPSNMASEAAPSSP-KCIAKLLGGSHQLFASRKEMVSTIIKETNSKF 120

Query: 121 FTLANALTFSTCKH-NTKCLSI-KNFVADSKTIDLPLPPEWGFPPTSYYFPVLPIIGIP 177
           FT+A AL FSTCK  +  C +I K  V DSKT D PLPPEWGFPPTSYY PVLPIIGIP
Sbjct: 121 FTIATALKFSTCKEISRNCKAIKKESVEDSKTFDFPLPPEWGFPPTSYYIPVLPIIGIP 178

[Close]

BLAST of CmoCh18G006750 vs. NCBI nr
Match: gi|593699184|ref|XP_007150057.1| (hypothetical protein PHAVU_005G122600g [Phaseolus vulgaris])

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-36
Identity = 83/172 (48.26%), Postives = 109/172 (63.37%), Query Frame = 1


Query: 8   IIAFLLFIVLARTQLAQCNTLKASISCLDCQSNYDFSGNMVEVNCKNVKNLSIAITEANG 67
           I A L  + +AR   + C TL+  +SC DC  NYDFSG M+ V C+ VKNL++AITE  G
Sbjct: 7   ITALLFALTMARIIPSACQTLEGKVSCTDCTHNYDFSGIMISVKCEGVKNLAMAITEEKG 66

Query: 68  SFKTTLPSNAASDDSETAPSNCIAKLIGGPHQLYASRKGMASRVIKGTNSNFFTLANALT 127
            FK  LP     D ++    NC+ KL+GGP+ LYA++K   S ++KG   N +T++  L+
Sbjct: 67  FFKVDLP----RDHTKPPSVNCVVKLLGGPNHLYATKKNKVSEIVKGKEKNTYTISTPLS 126

Query: 128 FST-CKHNTKCLSIKNFVADSKTIDLPLPPEWGFPPTSYY--FPVLPIIGIP 177
           F T C  NT+C + KN    SKT+D PLPPEWG  P+SYY  FP  PIIGIP
Sbjct: 127 FLTSCPQNTECKATKNQFGSSKTLDFPLPPEWGLAPSSYYLPFPFYPIIGIP 174

[Close]

BLAST of CmoCh18G006750 vs. NCBI nr
Match: gi|694405986|ref|XP_009377823.1| (PREDICTED: uncharacterized protein LOC103966390 [Pyrus x bretschneideri])

HSP 1 Score: 160.6 bits (405), Expect = 2.5e-36
Identity = 88/177 (49.72%), Postives = 115/177 (64.97%), Query Frame = 1


Query: 3   SLKLFIIAFLLFIVLARTQLAQCNTLKASISCLDCQSNYDFSGNMVEVNCKNVKNLSIAI 62
           +L   + A L  +VLA  +L+ C  LKA ++CLDC  NYDFSG  V V C  VK +++A+
Sbjct: 2   ALSWILPALLFALVLANVELSTCQVLKAKVTCLDCHQNYDFSGIKVLVKCDKVKKMAMAV 61

Query: 63  TEANGSFKTTLPSNAASDDSETAPSNCIAKLIGGPHQLYASRKGMASRVIKGTNSNFFTL 122
           TE +GSF+  LPSN  ++       NC+A+++GGP QLYASRK MAS ++K  +SN +T 
Sbjct: 62  TENDGSFEAKLPSN--NNTKSPDAKNCLARILGGPDQLYASRKFMASEIVKIQDSNSYTT 121

Query: 123 ANALTFST-CKHNTKCLSIK--NFVADSKTIDLPLPPEWGFPPTSYYFPVLPIIGIP 177
              L FST C  N K  + K  N    SKTI+LPLPPEWG  P+SYY P +PIIGIP
Sbjct: 122 TTPLGFSTSCPLNIKDAACKAMNKFGSSKTINLPLPPEWGLAPSSYYIPFIPIIGIP 176

[Close]

BLAST of CmoCh18G006750 vs. NCBI nr
Match: gi|225464902|ref|XP_002274217.1| (PREDICTED: uncharacterized protein LOC100258720 [Vitis vinifera])

HSP 1 Score: 159.1 bits (401), Expect = 7.2e-36
Identity = 85/171 (49.71%), Postives = 115/171 (67.25%), Query Frame = 1


Query: 8   IIAFLLF-IVLARTQLAQCNTLKASISCLDCQSNYDFSGNMVEVNCKNVKNLSIAITEAN 67
           +IA L F +VLA   L+ C+ +K S++CLDC  ++DFSG  V V C  VK L++A TEA+
Sbjct: 6   VIAPLFFALVLATIDLSTCHVMKGSVTCLDCHRHHDFSGIKVLVKCDRVKKLAMATTEAD 65

Query: 68  GSFKTTLPSNAASDDSETAPSNCIAKLIGGPHQLYASRKGMASRVIKGTNSNFFTLANAL 127
           GSFKT LPS+     + + P NC+AKL+GGP+QLYA RK   S+++K  + + +T++  L
Sbjct: 66  GSFKTNLPSDT---QTSSPPLNCLAKLLGGPNQLYAFRKNTVSKIVKARDDSSYTISTPL 125

Query: 128 TFS-TCKHNTKCLSIKNFVADSKTIDLPLPPEWGFPPTSYYFPVLPIIGIP 177
           +FS TC  + K      F   SKT+DLPLPPEWG  P+SYY P  PIIGIP
Sbjct: 126 SFSTTCPSSVKGAKYGEF-GSSKTVDLPLPPEWGLAPSSYYIPFFPIIGIP 172

The following BLAST results are available for this feature:

BLAST of CmoCh18G006750 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh18G006750 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYA1_CUCSA	1.4e-57	69.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G165730 PE=4 SV=1	[more]
V7BZI2_PHAVU	7.7e-37	48.26	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G122600g PE=4 SV=1	[more]
A0A0L9UNC2_PHAAN	5.0e-36	48.54	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g166700 PE=4 SV=1	[more]
A0A0S3SH23_PHAAN	5.0e-36	48.54	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G075600 PE=...	[more]
A5BY12_VITVI	5.0e-36	49.71	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00760 PE=4 SV=...	[more]

BLAST of CmoCh18G006750 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22430.1	8.8e-24	39.41	Pollen Ole e 1 allergen and extensin family protein	[more]
AT2G27385.1	1.3e-22	35.23	Pollen Ole e 1 allergen and extensin family protein	[more]

BLAST of CmoCh18G006750 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659071656\|ref\|XP_008461260.1\|	9.3e-60	71.27	PREDICTED: uncharacterized protein LOC103499896 [Cucumis melo]	[more]
gi\|449443456\|ref\|XP_004139493.1\|	1.9e-57	69.27	PREDICTED: uncharacterized protein LOC101207654 [Cucumis sativus]	[more]
gi\|593699184\|ref\|XP_007150057.1\|	1.1e-36	48.26	hypothetical protein PHAVU_005G122600g [Phaseolus vulgaris]	[more]
gi\|694405986\|ref\|XP_009377823.1\|	2.5e-36	49.72	PREDICTED: uncharacterized protein LOC103966390 [Pyrus x bretschneideri]	[more]
gi\|225464902\|ref\|XP_002274217.1\|	7.2e-36	49.71	PREDICTED: uncharacterized protein LOC100258720 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G006750.1	CmoCh18G006750.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33083	FAMILY NOT NAMED	coord: 1..130 score: 5.8
None	No IPR available	PANTHER	PTHR33083:SF5	POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN	coord: 1..130 score: 5.8
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_I	coord: 32..97 score: 1.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh18G006750	CmaCh18G006470	Cucurbita maxima (Rimu)	cmacmoB410
CmoCh18G006750	Cla003043	Watermelon (97103) v1	cmowmB384
CmoCh18G006750	ClCG01G012070	Watermelon (Charleston Gray)	cmowcgB346
CmoCh18G006750	Lsi03G001290	Bottle gourd (USVL1VR-Ls)	cmolsiB362
CmoCh18G006750	Cp4.1LG09g05490	Cucurbita pepo (Zucchini)	cmocpeB374
CmoCh18G006750	Carg26263	Silver-seed gourd	carcmoB0000

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh18G006750	Cucumber (Chinese Long) v3	cmocucB0460
CmoCh18G006750	Watermelon (97103) v2	cmowmbB386
CmoCh18G006750	Wax gourd	cmowgoB0532
CmoCh18G006750	Cucumber (Gy14) v1	cgycmoB0883
CmoCh18G006750	Wild cucumber (PI 183967)	cmocpiB386
CmoCh18G006750	Cucumber (Chinese Long) v2	cmocuB383
CmoCh18G006750	Watermelon (97103) v1	cmowmB376
CmoCh18G006750	Cucumber (Gy14) v2	cgybcmoB085
CmoCh18G006750	Melon (DHL92) v3.6.1	cmomedB400