CmoCh18G006400 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh18G006400
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Protein FAM136A-like protein
Location	Cmo_Chr18 : 8072183 .. 8074417 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCTAGCGGATCTTCTCTGTTGTGAGCGTTTTCTGGAGCTTGGAAGGAAGATGAATCACATAGCAGCCATGGAAGAACAAGTGGTTTCTGAGAGAATGAGGCAAAAGTTGAACGAAGTGAATATGGCTGCGCAGGCTCAACTTGGTCCTATTCAAGACCACGTCAATTTTACCCTTCAGGTTTGCCTCTTCGTGGTTTTTGATATTCGAAATCCGGTTTCTGTTTGGTGTTTACTGTTTTTCTCCATCAATGCATTTATTGATGATTTCCTTCTCTTCTGGATCTTCATTTTCATCATTTGTGATTTCTTTTACTTGATGACTGTTGATTGTTTTCGTGATTCTTGATCTTGACTGCAGCAAGCGTATTTCAAATGTGCCTATGAGTGCTTTGATAGGAGAAGAAAGCAGGAAGAGATTAGTAATTGCGTTGAGAATTGTAGTGTTCCGGTTGTCAAAGCGCAGCAACATGTTGAGAATGAGATGGCCAAGTTTCAAGTACGTGTTATTATCCATCATCTTGTTCTTATTTTTCTCTTTTTCGCCTCCATGTTCTCCCTCATTAGAATGATTTCCCTTTCAAACTACCTGTTATTTGATTTCTCGAGTCATTTAACTTCATATGTTGATCTCAACTCTTAAATTGACATAAACACATGGCTCGAAATGCTTCAAACCAAACCCCAACCAGCTTTGTTCTGGTTTTGAGATGGAATTCACCACATCACTCGGAATGTTATGGTTTTGTCCTTGTGAGGATGACCATGATTTTCTTTCAAGACCTCATCCTGCGCATATAACACCATTTTAAAACCATTCAATTCGAGAAATAAACAAAGTTTCTTATCATCGTTTGCAGAGATCAGCTATATATTTCAGCATTATTTAGTCGCGAACTGAAGTTTGAATTCACATTGAATGAGTAATGCAGTTAATCATATGGGAATTGCATGTCAGTTAGAAATGTTCACAAGGCGGGTCCTAGAAAGACTTCTCATCCCTATCTCTACCCAATTTTCGTTTATTTTTGCATGGATCAGTTACAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTGATAAGAGACAATTTCATTGATGAGTGAAATTTACAAGAGGGATGTATAATCCATGATGTTTACAAAAGACCTTCCCAATTTGCAGTGAGGGAGGTATAACTATAGGAAATAAAAATATTAGACAGTTTACACCAAGATATAGCTTGGTAAACAACATTGTCGAAAAGTTTTGTGTAGGTCTGTGTCGTTTCTGCAAATATTCTCTGATTAATTTCTTTCCACAGATTCCAAAAGCAAGCCATGATGAGGTTTTTCCATAATATGGCTTTTGCGTTTGAAAGCCATGTTCAAAATTTTCCTTTAATGAATAATATTTTCTAATATAATTTTTGGGTAAAACATCCTATAAGTTCATAAGGAAAAATAGTCTTCAACCGCCCCGCAAAGTGAGGCTGGGCGGGATGGGGTTGGTGTTGGAGTCGAAGATGGAGAATGTAATCTCCATCCCTGTCTCTAATGCTAATGGCAAGCTCCCAATCCCCATTTAAACAGGGATTCGCTACCCTGTTCGAGGCGGGTCCTTACGGGCTTTGACACTATAGGTTAAACAGACATTTCTAATGTCAATATGGTATCGGTGCATGCTATGAATGTGACTACCTAGGACATTTAGAAGCAGTGTTTCATGACCATGTTAATATGCCAACAAATATGATCTAATGTTATGATCATCTAATAAAGGAAAGGGTGTATTTTTGTATGGTGAATGCAGGAAAGATTGAACAGGTCACTAATGGTGTGCCAGGACAAGTTCGAAGCAGCTAAGCTTCAACAGAAAACTAACAGCGTATATGAATTGGAGTCATGCGTGGATTCATCAATACAAGAAAGTTTGAATACGCTTCCACACCTAGCTAATAAATTAAAAGCTTCCTTCAATATCAGGAATCAAGTTTAATGAGAGTTTGTATGGCTTCATTTTGCTCATTTTAATAGGATCCTTCACACTGACTATGCCTATTGCAACCCCAATTATCGTTTAGAGTTTTTGTAATTTCAATTCATTGACCTCGATTATGAACTTTCCCAGGGAATATGGGCGCTAGCTGAAGCTCATCCCTACCTGAACGACAGGATATTCTGACCCATTGTATACGATTTTGAATGAATAACAATGTGGAATGACTTTGTTCTAACCTTTCGTGAATTTTTATAGCCC

mRNA sequence

ACCCTAGCGGATCTTCTCTGTTGTGAGCGTTTTCTGGAGCTTGGAAGGAAGATGAATCACATAGCAGCCATGGAAGAACAAGTGGTTTCTGAGAGAATGAGGCAAAAGTTGAACGAAGTGAATATGGCTGCGCAGGCTCAACTTGGTCCTATTCAAGACCACGTCAATTTTACCCTTCAGCAAGCGTATTTCAAATGTGCCTATGAGTGCTTTGATAGGAGAAGAAAGCAGGAAGAGATTAGTAATTGCGTTGAGAATTGTAGTGTTCCGGTTGTCAAAGCGCAGCAACATGTTGAGAATGAGATGGCCAAGTTTCAAGAAAGATTGAACAGGTCACTAATGGTGTGCCAGGACAAGTTCGAAGCAGCTAAGCTTCAACAGAAAACTAACAGCGTATATGAATTGGAGTCATGCGTGGATTCATCAATACAAGAAAGTTTGAATACGCTTCCACACCTAGCTAATAAATTAAAAGCTTCCTTCAATATCAGGAATCAAGTTTAATGAGAGTTTGTATGGCTTCATTTTGCTCATTTTAATAGGATCCTTCACACTGACTATGCCTATTGCAACCCCAATTATCGTTTAGAGTTTTTGTAATTTCAATTCATTGACCTCGATTATGAACTTTCCCAGGGAATATGGGCGCTAGCTGAAGCTCATCCCTACCTGAACGACAGGATATTCTGACCCATTGTATACGATTTTGAATGAATAACAATGTGGAATGACTTTGTTCTAACCTTTCGTGAATTTTTATAGCCC

Coding sequence (CDS)

ATGAATCACATAGCAGCCATGGAAGAACAAGTGGTTTCTGAGAGAATGAGGCAAAAGTTGAACGAAGTGAATATGGCTGCGCAGGCTCAACTTGGTCCTATTCAAGACCACGTCAATTTTACCCTTCAGCAAGCGTATTTCAAATGTGCCTATGAGTGCTTTGATAGGAGAAGAAAGCAGGAAGAGATTAGTAATTGCGTTGAGAATTGTAGTGTTCCGGTTGTCAAAGCGCAGCAACATGTTGAGAATGAGATGGCCAAGTTTCAAGAAAGATTGAACAGGTCACTAATGGTGTGCCAGGACAAGTTCGAAGCAGCTAAGCTTCAACAGAAAACTAACAGCGTATATGAATTGGAGTCATGCGTGGATTCATCAATACAAGAAAGTTTGAATACGCTTCCACACCTAGCTAATAAATTAAAAGCTTCCTTCAATATCAGGAATCAAGTTTAA

Homology

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BLAST of CmoCh18G006400 vs. Swiss-Prot
Match: F136A_DANRE (Protein FAM136A OS=Danio rerio GN=fam136a PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-10
Identity = 37/116 (31.90%), Postives = 63/116 (54.31%), Query Frame = 1


Query: 35  QDHVNFTLQQAYFKCAYECFDRR-RKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLN 94
           ++H+   +Q   F+C+ EC +       ++  C+E C  P+ KAQ  V +E+ +FQ+RL+
Sbjct: 22  KEHIR-KMQGRMFRCSAECCEHPGNSMNQVHQCIERCHTPLAKAQGLVTSELEQFQDRLS 81

Query: 95  RSLMVCQDK----FEAAKLQQKTNSVYELESCVDSSIQESLNTLPHLANKLKASFN 146
           R  M C DK    F++   +    ++  ++ CV S + E LN LP +  +LK S N
Sbjct: 82  RCTMHCSDKAKDLFDSGAKEPAVRAL--MDGCVGSCVDEHLNLLPSMTRRLKDSLN 134

[Close]

BLAST of CmoCh18G006400 vs. Swiss-Prot
Match: F136A_XENTR (Protein FAM136A OS=Xenopus tropicalis GN=fam136a PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-09
Identity = 34/105 (32.38%), Postives = 57/105 (54.29%), Query Frame = 1


Query: 42  LQQAYFKCAYECF-DRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ 101
           +Q   F+C+ +C  D     +++ +C+E C  P+ +AQ  V NE+ +FQ RL R  M C 
Sbjct: 28  MQGKMFRCSAQCCEDNGASMQQVHHCIERCHTPLAQAQSLVTNELERFQNRLARCTMHCN 87

Query: 102 DK----FEAAKLQQKTNSVYELESCVDSSIQESLNTLPHLANKLK 142
           DK    F++   + +  +  +LE CV    +E +N +P +  KLK
Sbjct: 88  DKAKDSFDSGSKEAQVKA--QLEGCVIKCAEEHMNLIPSMTKKLK 130

[Close]

BLAST of CmoCh18G006400 vs. Swiss-Prot
Match: F136A_BOVIN (Protein FAM136A OS=Bos taurus GN=FAM136A PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 31/107 (28.97%), Postives = 59/107 (55.14%), Query Frame = 1


Query: 42  LQQAYFKCAYECFDRRR-KQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ 101
           +Q   F+C+  C +  +   +++  C+E C  P+ +AQ  V +E+ KFQ+RL R  M C 
Sbjct: 28  MQGLMFRCSAACCEESQASMQQVHQCIERCHAPLAQAQALVTSELEKFQDRLARCTMYCN 87

Query: 102 DKFEAA--KLQQKTNSVYELESCVDSSIQESLNTLPHLANKLKASFN 146
           DK + +     ++ +   +LE+CV   + + +N +P +  K+K S +
Sbjct: 88  DKAKDSIDAGSKELHVKRQLETCVTKCVDDHMNLIPTMTRKMKESLS 134

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BLAST of CmoCh18G006400 vs. Swiss-Prot
Match: F136A_HUMAN (Protein FAM136A OS=Homo sapiens GN=FAM136A PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 34/107 (31.78%), Postives = 59/107 (55.14%), Query Frame = 1


Query: 42  LQQAYFKCAYECF-DRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ 101
           +Q   F+C+  C  D +   +++  C+E C VP+ +AQ  V +E+ KFQ+RL R  M C 
Sbjct: 28  MQGLMFRCSASCCEDSQASMKQVHQCIERCHVPLAQAQALVTSELEKFQDRLARCTMHCN 87

Query: 102 DKFE------AAKLQQKTNSVYELESCVDSSIQESLNTLPHLANKLK 142
           DK +      + +LQ K     +L+SCV   + + ++ +P +  K+K
Sbjct: 88  DKAKDSIDAGSKELQVK----QQLDSCVTKCVDDHMHLIPTMTKKMK 130

[Close]

BLAST of CmoCh18G006400 vs. Swiss-Prot
Match: F136A_XENLA (Protein FAM136A OS=Xenopus laevis GN=fam136a PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 32/105 (30.48%), Postives = 57/105 (54.29%), Query Frame = 1


Query: 42  LQQAYFKCAYECF-DRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ 101
           +Q   F+C+ +C  D     +++ +C+E C  P+ +AQ  V  E+ +FQ RL+R  M C 
Sbjct: 28  MQGKMFRCSAQCCEDNGASMQQVHHCIERCHTPLAQAQSLVTTELERFQNRLSRCTMNCS 87

Query: 102 DK----FEAAKLQQKTNSVYELESCVDSSIQESLNTLPHLANKLK 142
           D+    F++   + +  +  +LE CV    +E +N +P +  KLK
Sbjct: 88  DQAKDAFDSGSKEAQVKA--QLEGCVIKCAEEHMNLIPSMTKKLK 130

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BLAST of CmoCh18G006400 vs. TrEMBL
Match: A0A0A0KV92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G589290 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.4e-71
Identity = 138/148 (93.24%), Postives = 145/148 (97.97%), Query Frame = 1


Query: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQAQLGPIQDHVNFTLQQAYFKCAYECFDRRRKQ 60
           MNHIAAMEEQVVSERMRQKLNEVNMAAQ+ LGPIQDHVNF+LQQAYFKCAYECFDRRR+Q
Sbjct: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRRQ 60

Query: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAAKLQQKTNSVYELES 120
           EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAA+LQQKT SVY+LES
Sbjct: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 120

Query: 121 CVDSSIQESLNTLPHLANKLKASFNIRN 149
           CVD+SIQES+NTLPHLANKLKASFNI N
Sbjct: 121 CVDASIQESMNTLPHLANKLKASFNITN 148

[Close]

BLAST of CmoCh18G006400 vs. TrEMBL
Match: A0A061EI59_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_019854 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 3.8e-61
Identity = 119/147 (80.95%), Postives = 137/147 (93.20%), Query Frame = 1


Query: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQAQLGPIQDHVNFTLQQAYFKCAYECFDRRRKQ 60
           M+HIAAME+Q+VSERMR+KLNEVN+AAQAQL P+QDH+NFTLQQAYFKCAYECFDRRRKQ
Sbjct: 1   MDHIAAMEQQLVSERMRKKLNEVNLAAQAQLAPVQDHINFTLQQAYFKCAYECFDRRRKQ 60

Query: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAAKLQQ-KTNSVYELE 120
           EEISNCVE+CSVPVV AQQH ENEMAKFQERLNRSLMVCQDKFE+AKLQQ KT ++ ELE
Sbjct: 61  EEISNCVEHCSVPVVNAQQHFENEMAKFQERLNRSLMVCQDKFESAKLQQIKTEAINELE 120

Query: 121 SCVDSSIQESLNTLPHLANKLKASFNI 147
           SCV+ SI++++ T+PHL  +LKASFNI
Sbjct: 121 SCVNQSIEDNMKTMPHLVGRLKASFNI 147

[Close]

BLAST of CmoCh18G006400 vs. TrEMBL
Match: A0A0B0NB27_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_00481 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.1e-59
Identity = 116/147 (78.91%), Postives = 136/147 (92.52%), Query Frame = 1


Query: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQAQLGPIQDHVNFTLQQAYFKCAYECFDRRRKQ 60
           M+HIAA+E+Q+VSERMR+KLNEVN+AAQAQL P+QDH+NFTLQQAYFKCAYECFDR RKQ
Sbjct: 1   MDHIAAVEQQLVSERMRRKLNEVNIAAQAQLAPVQDHINFTLQQAYFKCAYECFDRTRKQ 60

Query: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAAKLQQ-KTNSVYELE 120
           EEISNCVE+CSVPVV AQQH ENEMAKFQERLNRSLMVCQDKFE+AKLQQ K +++ ELE
Sbjct: 61  EEISNCVEHCSVPVVNAQQHFENEMAKFQERLNRSLMVCQDKFESAKLQQNKADAINELE 120

Query: 121 SCVDSSIQESLNTLPHLANKLKASFNI 147
           SCV+ SI++++ TLPHL  ++KASFNI
Sbjct: 121 SCVNQSIEDNMKTLPHLVGRMKASFNI 147

[Close]

BLAST of CmoCh18G006400 vs. TrEMBL
Match: A0A061EQU1_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_019854 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.1e-59
Identity = 119/151 (78.81%), Postives = 137/151 (90.73%), Query Frame = 1


Query: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQAQLGPIQDHVNFTLQQAYFKCAYECFDRRRKQ 60
           M+HIAAME+Q+VSERMR+KLNEVN+AAQAQL P+QDH+NFTLQQAYFKCAYECFDRRRKQ
Sbjct: 1   MDHIAAMEQQLVSERMRKKLNEVNLAAQAQLAPVQDHINFTLQQAYFKCAYECFDRRRKQ 60

Query: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQ----ERLNRSLMVCQDKFEAAKLQQ-KTNSV 120
           EEISNCVE+CSVPVV AQQH ENEMAKFQ    ERLNRSLMVCQDKFE+AKLQQ KT ++
Sbjct: 61  EEISNCVEHCSVPVVNAQQHFENEMAKFQEMSKERLNRSLMVCQDKFESAKLQQIKTEAI 120

Query: 121 YELESCVDSSIQESLNTLPHLANKLKASFNI 147
            ELESCV+ SI++++ T+PHL  +LKASFNI
Sbjct: 121 NELESCVNQSIEDNMKTMPHLVGRLKASFNI 151

[Close]

BLAST of CmoCh18G006400 vs. TrEMBL
Match: A0A0D2QFK7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G232100 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.1e-59
Identity = 116/147 (78.91%), Postives = 136/147 (92.52%), Query Frame = 1


Query: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQAQLGPIQDHVNFTLQQAYFKCAYECFDRRRKQ 60
           M+HIAA+E+Q+VSERMR+KLNEVN+AAQAQL P+QDH+NFTLQQAYFKCAYECFDR RKQ
Sbjct: 1   MDHIAAVEQQLVSERMRRKLNEVNIAAQAQLAPVQDHINFTLQQAYFKCAYECFDRTRKQ 60

Query: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAAKLQQ-KTNSVYELE 120
           EEISNCVE+CSVPVV AQQH ENEMAKFQERLNRSLMVCQDKFE+AKLQQ K +++ ELE
Sbjct: 61  EEISNCVEHCSVPVVNAQQHFENEMAKFQERLNRSLMVCQDKFESAKLQQNKADAINELE 120

Query: 121 SCVDSSIQESLNTLPHLANKLKASFNI 147
           SCV+ SI++++ TLPHL  ++KASFNI
Sbjct: 121 SCVNQSIEDNMKTLPHLVGRMKASFNI 147

[Close]

BLAST of CmoCh18G006400 vs. TAIR10
Match: AT2G31725.1 (AT2G31725.1 Eukaryotic protein of unknown function (DUF842))

HSP 1 Score: 228.4 bits (581), Expect = 2.9e-60
Identity = 112/149 (75.17%), Postives = 134/149 (89.93%), Query Frame = 1


Query: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQAQLGPIQDHVNFTLQQAYFKCAYECFDRRRKQ 60
           M+HIAA EEQ+VSER+R+KL EVN+AAQ QL PIQDH+NFTLQQAYFKCAYECFDRRRKQ
Sbjct: 1   MDHIAAAEEQIVSERLRRKLEEVNVAAQTQLSPIQDHINFTLQQAYFKCAYECFDRRRKQ 60

Query: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAAKLQQ-KTNSVYELE 120
           EEISNCVE+CSVPVVK+QQ+ ENEMA+FQERLNRSL+VCQDKFEA+KLQ+ +  +V E+E
Sbjct: 61  EEISNCVEHCSVPVVKSQQYFENEMAQFQERLNRSLVVCQDKFEASKLQKIRPEAVNEME 120

Query: 121 SCVDSSIQESLNTLPHLANKLKASFNIRN 149
           SCV  SI+E+LNTLPH+  ++K +FNI N
Sbjct: 121 SCVHKSIEENLNTLPHIVQRMKTAFNITN 149

[Close]

BLAST of CmoCh18G006400 vs. TAIR10
Match: AT1G05730.1 (AT1G05730.1 Eukaryotic protein of unknown function (DUF842))

HSP 1 Score: 213.0 bits (541), Expect = 1.3e-55
Identity = 103/147 (70.07%), Postives = 129/147 (87.76%), Query Frame = 1


Query: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQAQLGPIQDHVNFTLQQAYFKCAYECFDRRRKQ 60
           M+HIAA EEQ+V+ER+R+KL EVN  AQ+QL PIQDH+NFTLQQAYFKCAYECFDR RKQ
Sbjct: 1   MDHIAAAEEQIVTERIRRKLEEVNATAQSQLSPIQDHINFTLQQAYFKCAYECFDRNRKQ 60

Query: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAAKL-QQKTNSVYELE 120
           EEI+NCVE+CSVPVV AQQH E EM++FQER+NRSLMVCQDKFEAAKL + + ++   +E
Sbjct: 61  EEIANCVEHCSVPVVNAQQHFEGEMSQFQERMNRSLMVCQDKFEAAKLHKNRGDAAKAME 120

Query: 121 SCVDSSIQESLNTLPHLANKLKASFNI 147
           SCV++SI++SL+TLPH+  ++K SF+I
Sbjct: 121 SCVNTSIEDSLDTLPHIVQRMKTSFSI 147

[Close]

BLAST of CmoCh18G006400 vs. TAIR10
Match: AT2G43720.1 (AT2G43720.1 Eukaryotic protein of unknown function (DUF842))

HSP 1 Score: 171.0 bits (432), Expect = 5.5e-43
Identity = 84/141 (59.57%), Postives = 113/141 (80.14%), Query Frame = 1


Query: 8   EEQVVSERMRQKLNEVNMAAQAQLGPIQDHVNFTLQQAYFKCAYECFDRRRKQEEISNCV 67
           EE++V ER+R+K+NEV+ A+Q+ L P+QDH+NFTLQ+AYFKCAYECFDR R   EIS C 
Sbjct: 6   EEKMVRERIRKKVNEVSSASQSLLSPVQDHINFTLQKAYFKCAYECFDRTRTHAEISRCA 65

Query: 68  ENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAAKLQQKTNS--VYELESCVDSS 127
           E+CSVP+  AQ + +NEM+ FQERLNRSL+VCQDKFE AK QQKT S  V +LE CV+ +
Sbjct: 66  ESCSVPITNAQNYFDNEMSVFQERLNRSLVVCQDKFEVAK-QQKTRSEAVNDLEHCVNQT 125

Query: 128 IQESLNTLPHLANKLKASFNI 147
           + E++ TLP+L +++K + +I
Sbjct: 126 VDEAVKTLPNLVSRMKKALSI 145

[Close]

BLAST of CmoCh18G006400 vs. TAIR10
Match: AT1G05740.1 (AT1G05740.1 Eukaryotic protein of unknown function (DUF842))

HSP 1 Score: 143.7 bits (361), Expect = 9.4e-35
Identity = 72/138 (52.17%), Postives = 101/138 (73.19%), Query Frame = 1


Query: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQAQLGPIQDHVNFTL-----------QQAYFKC 60
           M+ +A  EEQ++ ER+R+K+ EVN + Q+QL PIQ+H++FTL           QQAYFKC
Sbjct: 1   MDRMAVAEEQILLERVRRKIEEVNASGQSQLSPIQEHISFTLLIYAPLIDDELQQAYFKC 60

Query: 61  AYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAAKL- 120
           + ECF++RRK E  +NCVE C VPV K+QQ  +++MAKFQ+R+NRSLMVCQDKFEAAKL 
Sbjct: 61  SNECFEKRRKPEVTTNCVELCRVPVAKSQQQFDSDMAKFQDRMNRSLMVCQDKFEAAKLL 120

Query: 121 -QQKTNSVYELESCVDSS 126
              + ++  ++E CV+ +
Sbjct: 121 NMNRIDAAKDMEGCVNDA 138

[Close]

BLAST of CmoCh18G006400 vs. NCBI nr
Match: gi|449435097|ref|XP_004135332.1| (PREDICTED: protein FAM136A [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 3.4e-71
Identity = 138/148 (93.24%), Postives = 145/148 (97.97%), Query Frame = 1


Query: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQAQLGPIQDHVNFTLQQAYFKCAYECFDRRRKQ 60
           MNHIAAMEEQVVSERMRQKLNEVNMAAQ+ LGPIQDHVNF+LQQAYFKCAYECFDRRR+Q
Sbjct: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRRQ 60

Query: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAAKLQQKTNSVYELES 120
           EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAA+LQQKT SVY+LES
Sbjct: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 120

Query: 121 CVDSSIQESLNTLPHLANKLKASFNIRN 149
           CVD+SIQES+NTLPHLANKLKASFNI N
Sbjct: 121 CVDASIQESMNTLPHLANKLKASFNITN 148

[Close]

BLAST of CmoCh18G006400 vs. NCBI nr
Match: gi|659090454|ref|XP_008446025.1| (PREDICTED: uncharacterized protein ZK637.2 [Cucumis melo])

HSP 1 Score: 273.1 bits (697), Expect = 2.9e-70
Identity = 137/148 (92.57%), Postives = 144/148 (97.30%), Query Frame = 1


Query: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQAQLGPIQDHVNFTLQQAYFKCAYECFDRRRKQ 60
           MNHIAAMEEQVVSERMRQKLNEVN AAQ+ LGPIQDHVNF+LQQAYFKCAYECFDRRR+Q
Sbjct: 1   MNHIAAMEEQVVSERMRQKLNEVNAAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRRQ 60

Query: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAAKLQQKTNSVYELES 120
           EEISNCVENCSVPVVKAQQHVENEM+KFQERLNRSLMVCQDKFEAA+LQQKT SVY+LES
Sbjct: 61  EEISNCVENCSVPVVKAQQHVENEMSKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 120

Query: 121 CVDSSIQESLNTLPHLANKLKASFNIRN 149
           CVD+SIQESLNTLPHLANKLKASFNI N
Sbjct: 121 CVDASIQESLNTLPHLANKLKASFNIGN 148

[Close]

BLAST of CmoCh18G006400 vs. NCBI nr
Match: gi|590654554|ref|XP_007033729.1| (Uncharacterized protein isoform 2 [Theobroma cacao])

HSP 1 Score: 242.3 bits (617), Expect = 5.5e-61
Identity = 119/147 (80.95%), Postives = 137/147 (93.20%), Query Frame = 1


Query: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQAQLGPIQDHVNFTLQQAYFKCAYECFDRRRKQ 60
           M+HIAAME+Q+VSERMR+KLNEVN+AAQAQL P+QDH+NFTLQQAYFKCAYECFDRRRKQ
Sbjct: 1   MDHIAAMEQQLVSERMRKKLNEVNLAAQAQLAPVQDHINFTLQQAYFKCAYECFDRRRKQ 60

Query: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAAKLQQ-KTNSVYELE 120
           EEISNCVE+CSVPVV AQQH ENEMAKFQERLNRSLMVCQDKFE+AKLQQ KT ++ ELE
Sbjct: 61  EEISNCVEHCSVPVVNAQQHFENEMAKFQERLNRSLMVCQDKFESAKLQQIKTEAINELE 120

Query: 121 SCVDSSIQESLNTLPHLANKLKASFNI 147
           SCV+ SI++++ T+PHL  +LKASFNI
Sbjct: 121 SCVNQSIEDNMKTMPHLVGRLKASFNI 147

[Close]

BLAST of CmoCh18G006400 vs. NCBI nr
Match: gi|823178234|ref|XP_012487066.1| (PREDICTED: protein FAM136A-like [Gossypium raimondii])

HSP 1 Score: 236.5 bits (602), Expect = 3.0e-59
Identity = 116/147 (78.91%), Postives = 136/147 (92.52%), Query Frame = 1


Query: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQAQLGPIQDHVNFTLQQAYFKCAYECFDRRRKQ 60
           M+HIAA+E+Q+VSERMR+KLNEVN+AAQAQL P+QDH+NFTLQQAYFKCAYECFDR RKQ
Sbjct: 1   MDHIAAVEQQLVSERMRRKLNEVNIAAQAQLAPVQDHINFTLQQAYFKCAYECFDRTRKQ 60

Query: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAAKLQQ-KTNSVYELE 120
           EEISNCVE+CSVPVV AQQH ENEMAKFQERLNRSLMVCQDKFE+AKLQQ K +++ ELE
Sbjct: 61  EEISNCVEHCSVPVVNAQQHFENEMAKFQERLNRSLMVCQDKFESAKLQQNKADAINELE 120

Query: 121 SCVDSSIQESLNTLPHLANKLKASFNI 147
           SCV+ SI++++ TLPHL  ++KASFNI
Sbjct: 121 SCVNQSIEDNMKTLPHLVGRMKASFNI 147

[Close]

BLAST of CmoCh18G006400 vs. NCBI nr
Match: gi|590654551|ref|XP_007033728.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 236.5 bits (602), Expect = 3.0e-59
Identity = 119/151 (78.81%), Postives = 137/151 (90.73%), Query Frame = 1


Query: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQAQLGPIQDHVNFTLQQAYFKCAYECFDRRRKQ 60
           M+HIAAME+Q+VSERMR+KLNEVN+AAQAQL P+QDH+NFTLQQAYFKCAYECFDRRRKQ
Sbjct: 1   MDHIAAMEQQLVSERMRKKLNEVNLAAQAQLAPVQDHINFTLQQAYFKCAYECFDRRRKQ 60

Query: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQ----ERLNRSLMVCQDKFEAAKLQQ-KTNSV 120
           EEISNCVE+CSVPVV AQQH ENEMAKFQ    ERLNRSLMVCQDKFE+AKLQQ KT ++
Sbjct: 61  EEISNCVEHCSVPVVNAQQHFENEMAKFQEMSKERLNRSLMVCQDKFESAKLQQIKTEAI 120

Query: 121 YELESCVDSSIQESLNTLPHLANKLKASFNI 147
            ELESCV+ SI++++ T+PHL  +LKASFNI
Sbjct: 121 NELESCVNQSIEDNMKTMPHLVGRLKASFNI 151

The following BLAST results are available for this feature:

BLAST of CmoCh18G006400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
F136A_DANRE	2.6e-10	31.90	Protein FAM136A OS=Danio rerio GN=fam136a PE=2 SV=1	[more]
F136A_XENTR	2.2e-09	32.38	Protein FAM136A OS=Xenopus tropicalis GN=fam136a PE=2 SV=1	[more]
F136A_BOVIN	1.4e-08	28.97	Protein FAM136A OS=Bos taurus GN=FAM136A PE=2 SV=1	[more]
F136A_HUMAN	1.4e-08	31.78	Protein FAM136A OS=Homo sapiens GN=FAM136A PE=1 SV=1	[more]
F136A_XENLA	1.4e-08	30.48	Protein FAM136A OS=Xenopus laevis GN=fam136a PE=2 SV=1	[more]

BLAST of CmoCh18G006400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV92_CUCSA	2.4e-71	93.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G589290 PE=4 SV=1	[more]
A0A061EI59_THECC	3.8e-61	80.95	Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_019854 PE=4 SV=1	[more]
A0A0B0NB27_GOSAR	2.1e-59	78.91	Uncharacterized protein OS=Gossypium arboreum GN=F383_00481 PE=4 SV=1	[more]
A0A061EQU1_THECC	2.1e-59	78.81	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_019854 PE=4 SV=1	[more]
A0A0D2QFK7_GOSRA	2.1e-59	78.91	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G232100 PE=4 SV=1	[more]

BLAST of CmoCh18G006400 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G31725.1	2.9e-60	75.17	Eukaryotic protein of unknown function (DUF842)	[more]
AT1G05730.1	1.3e-55	70.07	Eukaryotic protein of unknown function (DUF842)	[more]
AT2G43720.1	5.5e-43	59.57	Eukaryotic protein of unknown function (DUF842)	[more]
AT1G05740.1	9.4e-35	52.17	Eukaryotic protein of unknown function (DUF842)	[more]

BLAST of CmoCh18G006400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449435097\|ref\|XP_004135332.1\|	3.4e-71	93.24	PREDICTED: protein FAM136A [Cucumis sativus]	[more]
gi\|659090454\|ref\|XP_008446025.1\|	2.9e-70	92.57	PREDICTED: uncharacterized protein ZK637.2 [Cucumis melo]	[more]
gi\|590654554\|ref\|XP_007033729.1\|	5.5e-61	80.95	Uncharacterized protein isoform 2 [Theobroma cacao]	[more]
gi\|823178234\|ref\|XP_012487066.1\|	3.0e-59	78.91	PREDICTED: protein FAM136A-like [Gossypium raimondii]	[more]
gi\|590654551\|ref\|XP_007033728.1\|	3.0e-59	78.81	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008560	DUF842_euk

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed RNA polymerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G006400.1	CmoCh18G006400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008560	Protein of unknown function DUF842, eukaryotic	PANTHER	PTHR21096	UNCHARACTERIZED	coord: 1..150 score: 1.1
IPR008560	Protein of unknown function DUF842, eukaryotic	PFAM	PF05811	DUF842	coord: 21..142 score: 4.5
None	No IPR available	PANTHER	PTHR21096:SF0	PROTEIN FAM136A	coord: 1..150 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh18G006400	Cucsa.075810	Cucumber (Gy14) v1	cgycmoB0120
CmoCh18G006400	CmaCh18G006830	Cucurbita maxima (Rimu)	cmacmoB410
CmoCh18G006400	Cla022953	Watermelon (97103) v1	cmowmB393
CmoCh18G006400	Csa5G589290	Cucumber (Chinese Long) v2	cmocuB407
CmoCh18G006400	MELO3C011855	Melon (DHL92) v3.5.1	cmomeB345
CmoCh18G006400	ClCG11G013550	Watermelon (Charleston Gray)	cmowcgB336
CmoCh18G006400	CSPI05G21310	Wild cucumber (PI 183967)	cmocpiB412
CmoCh18G006400	Lsi04G006940	Bottle gourd (USVL1VR-Ls)	cmolsiB365
CmoCh18G006400	MELO3C011855.2	Melon (DHL92) v3.6.1	cmomedB396
CmoCh18G006400	CsaV3_5G030170	Cucumber (Chinese Long) v3	cmocucB0488
CmoCh18G006400	Cla97C11G219470	Watermelon (97103) v2	cmowmbB391
CmoCh18G006400	Bhi07G001542	Wax gourd	cmowgoB0537
CmoCh18G006400	CsGy5G020870	Cucumber (Gy14) v2	cgybcmoB604
CmoCh18G006400	Carg21217	Silver-seed gourd	carcmoB0944

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh18G006400	Cucurbita moschata (Rifu)	cmocmoB337
CmoCh18G006400	Cucurbita maxima (Rimu)	cmacmoB707
CmoCh18G006400	Cucurbita pepo (Zucchini)	cmocpeB374
CmoCh18G006400	Cucurbita pepo (Zucchini)	cmocpeB393
CmoCh18G006400	Silver-seed gourd	carcmoB0186