CmoCh17G013820 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G013820
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Calmodulin-binding transcription activator 4-like protein
Location	Cmo_Chr17 : 10719368 .. 10720622 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGATGTTAGTGACCTTTATCGAGAAGCACAAACACGTTGGCTGAAGCCTCCTGAGGTGCTCTTTATCTTACAGAATCATGAGAAATATCAGCTGACTGAGGAGGCCCCTAAACAGCCAACTAGTAAGTAACCCTTATTCACTATTATGTTTTATACCGTTTGGATAATTATTGAACAATAGAGTTGCAACAGGTGGTTCCTTGTTTCTTTTTAACAAGAGAGTACTCCGTTTCTTCCGTAGAGATGGTCATAACTGGAGGAAAAAAAGGGACGGAAGAACTGTAGGAGAAGCACACGAACGACTTAAGGTTTTGTATCATGCTTCCACTCCATTTAACTCATTTTCCTATTAACTTTTCCATCTGCTGCAATAATATACCACGGCATGGTTTTTGAGTTTGTTTGCCCTCCTTAATCGAAAGGATAGATTTTGCTTAGAAGAGACAAAAAAAAAAAAAAAAGGGCGGGTGTAGTGTGGTGGGGAGAAGCCATCCTAAATGAGTTTTCTAACAATGGTGCTAACTGAAAAATAATCATAAAAATTAAGGGAGCATTTAACTCGCTTGTTATATTTATGTAAAATTGAGCCAAATGTTTGATATGTGAGTCAGCTAACTATCGCACACACGCACATACCCTTCAACCCTCCACTACCTATGCGTATGGGTGGAATATGCTGTAATGCCTACACTTGTTAGTGTTTTTAGCATTAAAATTTTGAAAACTTTGCATGCAAACTGCAAAATATAAGATCTGGCAATCATTGAAATAAGTAGAGTAAACGAAATGATGGCCAGGACTGCATGTCTGCATGGAACATACTATGGTAACATAGTTTTGATTCCAGGACTAATGAAACGCTGCAATGGCGATGCCCAAGAAATTGAGCGCTAGAAAATAAACTTTAAGTTGTAATTTCAAGCTGGTTAGAGTTGTCGTATGGGGAAAATATTATAAGCCTTGGATGTGGTTAGTTCAACATCAACTTTACTGGATTTCATGCTATAGGCAACTAAAACTTATTCAATGGCTTATGTGATATAAATTTTCCATCACCTCGAGTGCTATACTACCCAACCCACTGATCTGTCTGCTTTAGATCTTTTGAGATCAACAAAGTTTTCTTACTGATTGGTCTGGTCGTGATTATTCTGCACGGTTAGGTTGGAAATGCTGAAGCGTTAAATTGCTATTATGCACATGGAGAGCACAATCCCAATTTCCAGAGACGTAGCTATTGGATGCTGGATCAG

mRNA sequence

TATGATGTTAGTGACCTTTATCGAGAAGCACAAACACGTTGGCTGAAGCCTCCTGAGGTGCTCTTTATCTTACAGAATCATGAGAAATATCAGCTGACTGAGGAGGCCCCTAAACAGCCAACTAGTGGTTCCTTGTTTCTTTTTAACAAGAGAGTACTCCGTTTCTTCCGTAGAGATGGTCATAACTGGAGGAAAAAAAGGGACGGAAGAACTGTAGGAGAAGCACACGAACGACTTAAGGTTGGAAATGCTGAAGCGTTAAATTGCTATTATGCACATGGAGAGCACAATCCCAATTTCCAGAGACGTAGCTATTGGATGCTGGATCAG

Coding sequence (CDS)

TATGATGTTAGTGACCTTTATCGAGAAGCACAAACACGTTGGCTGAAGCCTCCTGAGGTGCTCTTTATCTTACAGAATCATGAGAAATATCAGCTGACTGAGGAGGCCCCTAAACAGCCAACTAGTGGTTCCTTGTTTCTTTTTAACAAGAGAGTACTCCGTTTCTTCCGTAGAGATGGTCATAACTGGAGGAAAAAAAGGGACGGAAGAACTGTAGGAGAAGCACACGAACGACTTAAGGTTGGAAATGCTGAAGCGTTAAATTGCTATTATGCACATGGAGAGCACAATCCCAATTTCCAGAGACGTAGCTATTGGATGCTGGATCAG

Homology

[Close]

BLAST of CmoCh17G013820 vs. Swiss-Prot
Match: CMTA4_ARATH (Calmodulin-binding transcription activator 4 OS=Arabidopsis thaliana GN=CMTA4 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 5.7e-47
Identity = 83/109 (76.15%), Postives = 95/109 (87.16%), Query Frame = 1


Query: 1   YDVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG 60
           Y++S LY+EA +RWLKPPEVLFILQNHE   LT  AP++PTSGSL LFNKRVL+FFR+DG
Sbjct: 36  YEISTLYQEAHSRWLKPPEVLFILQNHESLTLTNTAPQRPTSGSLLLFNKRVLKFFRKDG 95

Query: 61  HNWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 110
           H WR+KRDGR + EAHERLKVGNAEALNCYYAHGE +P F+RR YWMLD
Sbjct: 96  HQWRRKRDGRAIAEAHERLKVGNAEALNCYYAHGEQDPTFRRRIYWMLD 144

[Close]

BLAST of CmoCh17G013820 vs. Swiss-Prot
Match: CMTA2_ARATH (Calmodulin-binding transcription activator 2 OS=Arabidopsis thaliana GN=CMTA2 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.0e-39
Identity = 69/109 (63.30%), Postives = 89/109 (81.65%), Query Frame = 1


Query: 2   DVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGH 61
           D+  L  EAQ RWL+P E+  IL+NH+K+ +  E P +P SGSLFLF+++VLR+FR+DGH
Sbjct: 14  DIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLFDRKVLRYFRKDGH 73

Query: 62  NWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ 111
           NWRKK+DG+TV EAHE+LKVG+ + L+CYYAHGE N NFQRR YWML+Q
Sbjct: 74  NWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEDNENFQRRCYWMLEQ 122

[Close]

BLAST of CmoCh17G013820 vs. Swiss-Prot
Match: CMTA1_ARATH (Calmodulin-binding transcription activator 1 OS=Arabidopsis thaliana GN=CMTA1 PE=2 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 9.7e-39
Identity = 68/109 (62.39%), Postives = 89/109 (81.65%), Query Frame = 1


Query: 2   DVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGH 61
           D+  L  EAQ RWL+P E+  ILQN+ K+ +  E+P +P SGSLFLF+++VLR+FR+DGH
Sbjct: 17  DMEQLLSEAQHRWLRPTEICEILQNYHKFHIASESPTRPASGSLFLFDRKVLRYFRKDGH 76

Query: 62  NWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ 111
           NWRKK+DG+T+ EAHE+LKVG+ + L+CYYAHGE N NFQRR YWML+Q
Sbjct: 77  NWRKKKDGKTIREAHEKLKVGSIDVLHCYYAHGEANENFQRRCYWMLEQ 125

[Close]

BLAST of CmoCh17G013820 vs. Swiss-Prot
Match: CMTA3_ARATH (Calmodulin-binding transcription activator 3 OS=Arabidopsis thaliana GN=CMTA3 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 2.2e-38
Identity = 65/109 (59.63%), Postives = 91/109 (83.49%), Query Frame = 1


Query: 2   DVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGH 61
           DV  +  EA+ RWL+PPE+  ILQN++++Q++ E P  P+SGS+F+F+++VLR+FR+DGH
Sbjct: 14  DVGQILSEARHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMFDRKVLRYFRKDGH 73

Query: 62  NWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ 111
           NWRKK+DG+TV EAHERLK G+ + L+CYYAHG+ N NFQRRSYW+L +
Sbjct: 74  NWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGQDNENFQRRSYWLLQE 122

[Close]

BLAST of CmoCh17G013820 vs. Swiss-Prot
Match: CMTA5_ARATH (Calmodulin-binding transcription activator 5 OS=Arabidopsis thaliana GN=CMTA5 PE=2 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 4.1e-29
Identity = 54/109 (49.54%), Postives = 79/109 (72.48%), Query Frame = 1


Query: 2   DVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGH 61
           D+  +  EA +RWL+P E+  +L NH+ + +  +    P SG++ LF++++LR FR+DGH
Sbjct: 24  DIQTMLDEAYSRWLRPNEIHALLCNHKFFTINVKPVNLPKSGTIVLFDRKMLRNFRKDGH 83

Query: 62  NWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ 111
           NW+KK+DG+T+ EAHE LKVGN E ++ YYAHGE  P F RR YW+LD+
Sbjct: 84  NWKKKKDGKTIKEAHEHLKVGNEERIHVYYAHGEDTPTFVRRCYWLLDK 132

[Close]

BLAST of CmoCh17G013820 vs. TrEMBL
Match: A0A0A0KCA8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095310 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 2.2e-58
Identity = 106/109 (97.25%), Postives = 109/109 (100.00%), Query Frame = 1


Query: 1   YDVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG 60
           YD++DLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG
Sbjct: 6   YDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG 65

Query: 61  HNWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 110
           H+WRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD
Sbjct: 66  HSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 114

[Close]

BLAST of CmoCh17G013820 vs. TrEMBL
Match: A0A0L9TLU4_PHAAN (Uncharacterized protein (Fragment) OS=Phaseolus angularis GN=LR48_Vigan01g107000 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.0e-51
Identity = 93/109 (85.32%), Postives = 102/109 (93.58%), Query Frame = 1


Query: 1   YDVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG 60
           YD++DL+ EAQ RWLKP EV++ILQNHEK+QLT+E P+QPTSGSLFLFNKRVLRFFR+DG
Sbjct: 7   YDINDLHHEAQARWLKPAEVMYILQNHEKFQLTQEPPQQPTSGSLFLFNKRVLRFFRKDG 66

Query: 61  HNWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 110
           HNWRKKRDGRTVGEAHERLKVGN EALNCYYAHGE  PNFQRRSYWMLD
Sbjct: 67  HNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQKPNFQRRSYWMLD 115

[Close]

BLAST of CmoCh17G013820 vs. TrEMBL
Match: A0A0S3R1D4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G205600 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.0e-51
Identity = 93/109 (85.32%), Postives = 102/109 (93.58%), Query Frame = 1


Query: 1   YDVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG 60
           YD++DL+ EAQ RWLKP EV++ILQNHEK+QLT+E P+QPTSGSLFLFNKRVLRFFR+DG
Sbjct: 7   YDINDLHHEAQARWLKPAEVMYILQNHEKFQLTQEPPQQPTSGSLFLFNKRVLRFFRKDG 66

Query: 61  HNWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 110
           HNWRKKRDGRTVGEAHERLKVGN EALNCYYAHGE  PNFQRRSYWMLD
Sbjct: 67  HNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQKPNFQRRSYWMLD 115

[Close]

BLAST of CmoCh17G013820 vs. TrEMBL
Match: K7KQB0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G148300 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 4.5e-51
Identity = 92/109 (84.40%), Postives = 102/109 (93.58%), Query Frame = 1


Query: 1   YDVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG 60
           YD++DL++EAQ RWLKP EV++ILQNHEK+Q T+E P+QPTSGSLFLFNKRVLRFFR+DG
Sbjct: 7   YDINDLHQEAQARWLKPAEVMYILQNHEKFQFTQEPPQQPTSGSLFLFNKRVLRFFRKDG 66

Query: 61  HNWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 110
           HNWRKKRDGRTVGEAHERLKVGN EALNCYYAHGE NP FQRRSYWMLD
Sbjct: 67  HNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPTFQRRSYWMLD 115

[Close]

BLAST of CmoCh17G013820 vs. TrEMBL
Match: A0A0R0K5M7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G148300 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 4.5e-51
Identity = 92/109 (84.40%), Postives = 102/109 (93.58%), Query Frame = 1


Query: 1   YDVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG 60
           YD++DL++EAQ RWLKP EV++ILQNHEK+Q T+E P+QPTSGSLFLFNKRVLRFFR+DG
Sbjct: 7   YDINDLHQEAQARWLKPAEVMYILQNHEKFQFTQEPPQQPTSGSLFLFNKRVLRFFRKDG 66

Query: 61  HNWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 110
           HNWRKKRDGRTVGEAHERLKVGN EALNCYYAHGE NP FQRRSYWMLD
Sbjct: 67  HNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPTFQRRSYWMLD 115

[Close]

BLAST of CmoCh17G013820 vs. TAIR10
Match: AT1G67310.1 (AT1G67310.1 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains)

HSP 1 Score: 188.0 bits (476), Expect = 3.2e-48
Identity = 83/109 (76.15%), Postives = 95/109 (87.16%), Query Frame = 1


Query: 1   YDVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG 60
           Y++S LY+EA +RWLKPPEVLFILQNHE   LT  AP++PTSGSL LFNKRVL+FFR+DG
Sbjct: 36  YEISTLYQEAHSRWLKPPEVLFILQNHESLTLTNTAPQRPTSGSLLLFNKRVLKFFRKDG 95

Query: 61  HNWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 110
           H WR+KRDGR + EAHERLKVGNAEALNCYYAHGE +P F+RR YWMLD
Sbjct: 96  HQWRRKRDGRAIAEAHERLKVGNAEALNCYYAHGEQDPTFRRRIYWMLD 144

[Close]

BLAST of CmoCh17G013820 vs. TAIR10
Match: AT5G64220.1 (AT5G64220.1 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains)

HSP 1 Score: 162.9 bits (411), Expect = 1.1e-40
Identity = 69/109 (63.30%), Postives = 89/109 (81.65%), Query Frame = 1


Query: 2   DVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGH 61
           D+  L  EAQ RWL+P E+  IL+NH+K+ +  E P +P SGSLFLF+++VLR+FR+DGH
Sbjct: 14  DIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLFDRKVLRYFRKDGH 73

Query: 62  NWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ 111
           NWRKK+DG+TV EAHE+LKVG+ + L+CYYAHGE N NFQRR YWML+Q
Sbjct: 74  NWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEDNENFQRRCYWMLEQ 122

[Close]

BLAST of CmoCh17G013820 vs. TAIR10
Match: AT5G09410.3 (AT5G09410.3 ethylene induced calmodulin binding protein)

HSP 1 Score: 160.6 bits (405), Expect = 5.5e-40
Identity = 68/109 (62.39%), Postives = 89/109 (81.65%), Query Frame = 1


Query: 2   DVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGH 61
           D+  L  EAQ RWL+P E+  ILQN+ K+ +  E+P +P SGSLFLF+++VLR+FR+DGH
Sbjct: 76  DMEQLLSEAQHRWLRPTEICEILQNYHKFHIASESPTRPASGSLFLFDRKVLRYFRKDGH 135

Query: 62  NWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ 111
           NWRKK+DG+T+ EAHE+LKVG+ + L+CYYAHGE N NFQRR YWML+Q
Sbjct: 136 NWRKKKDGKTIREAHEKLKVGSIDVLHCYYAHGEANENFQRRCYWMLEQ 184

[Close]

BLAST of CmoCh17G013820 vs. TAIR10
Match: AT2G22300.1 (AT2G22300.1 signal responsive 1)

HSP 1 Score: 159.5 bits (402), Expect = 1.2e-39
Identity = 65/109 (59.63%), Postives = 91/109 (83.49%), Query Frame = 1


Query: 2   DVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGH 61
           DV  +  EA+ RWL+PPE+  ILQN++++Q++ E P  P+SGS+F+F+++VLR+FR+DGH
Sbjct: 14  DVGQILSEARHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMFDRKVLRYFRKDGH 73

Query: 62  NWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ 111
           NWRKK+DG+TV EAHERLK G+ + L+CYYAHG+ N NFQRRSYW+L +
Sbjct: 74  NWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGQDNENFQRRSYWLLQE 122

[Close]

BLAST of CmoCh17G013820 vs. TAIR10
Match: AT3G16940.1 (AT3G16940.1 calmodulin binding;transcription regulators)

HSP 1 Score: 129.4 bits (324), Expect = 1.3e-30
Identity = 57/109 (52.29%), Postives = 78/109 (71.56%), Query Frame = 1


Query: 2   DVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGH 61
           DV  +  EA++RWL+P E+  IL N + + +  +    P SG + LF++++LR FR+DGH
Sbjct: 24  DVQTMLEEAKSRWLRPNEIHAILYNPKYFTINVKPVNLPNSGRIILFDRKMLRNFRKDGH 83

Query: 62  NWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ 111
           NW+KK+DGRTV EAHE LKVGN E ++ YYAHGE N  F RR YW+LD+
Sbjct: 84  NWKKKKDGRTVKEAHEHLKVGNEERIHVYYAHGEDNTTFVRRCYWLLDK 132

[Close]

BLAST of CmoCh17G013820 vs. NCBI nr
Match: gi|449445760|ref|XP_004140640.1| (PREDICTED: calmodulin-binding transcription activator 4 [Cucumis sativus])

HSP 1 Score: 232.6 bits (592), Expect = 3.2e-58
Identity = 106/109 (97.25%), Postives = 109/109 (100.00%), Query Frame = 1


Query: 1   YDVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG 60
           YD++DLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG
Sbjct: 6   YDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG 65

Query: 61  HNWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 110
           H+WRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD
Sbjct: 66  HSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 114

[Close]

BLAST of CmoCh17G013820 vs. NCBI nr
Match: gi|659119787|ref|XP_008459844.1| (PREDICTED: calmodulin-binding transcription activator 4 [Cucumis melo])

HSP 1 Score: 231.1 bits (588), Expect = 9.3e-58
Identity = 106/110 (96.36%), Postives = 109/110 (99.09%), Query Frame = 1


Query: 1   YDVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG 60
           YD++ LYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG
Sbjct: 6   YDINYLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG 65

Query: 61  HNWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ 111
           H+WRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ
Sbjct: 66  HSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQ 115

[Close]

BLAST of CmoCh17G013820 vs. NCBI nr
Match: gi|965657974|dbj|BAT74393.1| (hypothetical protein VIGAN_01205600 [Vigna angularis var. angularis])

HSP 1 Score: 209.5 bits (532), Expect = 2.9e-51
Identity = 93/109 (85.32%), Postives = 102/109 (93.58%), Query Frame = 1


Query: 1   YDVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG 60
           YD++DL+ EAQ RWLKP EV++ILQNHEK+QLT+E P+QPTSGSLFLFNKRVLRFFR+DG
Sbjct: 7   YDINDLHHEAQARWLKPAEVMYILQNHEKFQLTQEPPQQPTSGSLFLFNKRVLRFFRKDG 66

Query: 61  HNWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 110
           HNWRKKRDGRTVGEAHERLKVGN EALNCYYAHGE  PNFQRRSYWMLD
Sbjct: 67  HNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQKPNFQRRSYWMLD 115

[Close]

BLAST of CmoCh17G013820 vs. NCBI nr
Match: gi|920687532|gb|KOM31515.1| (hypothetical protein LR48_Vigan01g107000, partial [Vigna angularis])

HSP 1 Score: 209.5 bits (532), Expect = 2.9e-51
Identity = 93/109 (85.32%), Postives = 102/109 (93.58%), Query Frame = 1


Query: 1   YDVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG 60
           YD++DL+ EAQ RWLKP EV++ILQNHEK+QLT+E P+QPTSGSLFLFNKRVLRFFR+DG
Sbjct: 7   YDINDLHHEAQARWLKPAEVMYILQNHEKFQLTQEPPQQPTSGSLFLFNKRVLRFFRKDG 66

Query: 61  HNWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 110
           HNWRKKRDGRTVGEAHERLKVGN EALNCYYAHGE  PNFQRRSYWMLD
Sbjct: 67  HNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQKPNFQRRSYWMLD 115

[Close]

BLAST of CmoCh17G013820 vs. NCBI nr
Match: gi|571455577|ref|XP_006580123.1| (PREDICTED: calmodulin-binding transcription activator 4 isoform X3 [Glycine max])

HSP 1 Score: 208.4 bits (529), Expect = 6.5e-51
Identity = 92/109 (84.40%), Postives = 102/109 (93.58%), Query Frame = 1


Query: 1   YDVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG 60
           YD++DL++EAQ RWLKP EV++ILQNHEK+Q T+E P+QPTSGSLFLFNKRVLRFFR+DG
Sbjct: 7   YDINDLHQEAQARWLKPAEVMYILQNHEKFQFTQEPPQQPTSGSLFLFNKRVLRFFRKDG 66

Query: 61  HNWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLD 110
           HNWRKKRDGRTVGEAHERLKVGN EALNCYYAHGE NP FQRRSYWMLD
Sbjct: 67  HNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPTFQRRSYWMLD 115

The following BLAST results are available for this feature:

BLAST of CmoCh17G013820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CMTA4_ARATH	5.7e-47	76.15	Calmodulin-binding transcription activator 4 OS=Arabidopsis thaliana GN=CMTA4 PE...	[more]
CMTA2_ARATH	2.0e-39	63.30	Calmodulin-binding transcription activator 2 OS=Arabidopsis thaliana GN=CMTA2 PE...	[more]
CMTA1_ARATH	9.7e-39	62.39	Calmodulin-binding transcription activator 1 OS=Arabidopsis thaliana GN=CMTA1 PE...	[more]
CMTA3_ARATH	2.2e-38	59.63	Calmodulin-binding transcription activator 3 OS=Arabidopsis thaliana GN=CMTA3 PE...	[more]
CMTA5_ARATH	4.1e-29	49.54	Calmodulin-binding transcription activator 5 OS=Arabidopsis thaliana GN=CMTA5 PE...	[more]

BLAST of CmoCh17G013820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCA8_CUCSA	2.2e-58	97.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095310 PE=4 SV=1	[more]
A0A0L9TLU4_PHAAN	2.0e-51	85.32	Uncharacterized protein (Fragment) OS=Phaseolus angularis GN=LR48_Vigan01g107000...	[more]
A0A0S3R1D4_PHAAN	2.0e-51	85.32	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G205600 PE=...	[more]
K7KQB0_SOYBN	4.5e-51	84.40	Uncharacterized protein OS=Glycine max GN=GLYMA_05G148300 PE=4 SV=1	[more]
A0A0R0K5M7_SOYBN	4.5e-51	84.40	Uncharacterized protein OS=Glycine max GN=GLYMA_05G148300 PE=4 SV=1	[more]

BLAST of CmoCh17G013820 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G67310.1	3.2e-48	76.15	Calmodulin-binding transcription activator protein with CG-1 and Ank...	[more]
AT5G64220.1	1.1e-40	63.30	Calmodulin-binding transcription activator protein with CG-1 and Ank...	[more]
AT5G09410.3	5.5e-40	62.39	ethylene induced calmodulin binding protein	[more]
AT2G22300.1	1.2e-39	59.63	signal responsive 1	[more]
AT3G16940.1	1.3e-30	52.29	calmodulin binding;transcription regulators	[more]

BLAST of CmoCh17G013820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445760\|ref\|XP_004140640.1\|	3.2e-58	97.25	PREDICTED: calmodulin-binding transcription activator 4 [Cucumis sativus]	[more]
gi\|659119787\|ref\|XP_008459844.1\|	9.3e-58	96.36	PREDICTED: calmodulin-binding transcription activator 4 [Cucumis melo]	[more]
gi\|965657974\|dbj\|BAT74393.1\|	2.9e-51	85.32	hypothetical protein VIGAN_01205600 [Vigna angularis var. angularis]	[more]
gi\|920687532\|gb\|KOM31515.1\|	2.9e-51	85.32	hypothetical protein LR48_Vigan01g107000, partial [Vigna angularis]	[more]
gi\|571455577\|ref\|XP_006580123.1\|	6.5e-51	84.40	PREDICTED: calmodulin-binding transcription activator 4 isoform X3 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005559	CG-1_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G013820.1	CmoCh17G013820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005559	CG-1 DNA-binding domain	PFAM	PF03859	CG-1	coord: 9..110 score: 3.3
IPR005559	CG-1 DNA-binding domain	SMART	SM01076	CG_1_2	coord: 6..110 score: 2.4
IPR005559	CG-1 DNA-binding domain	PROFILE	PS51437	CG_1	coord: 3..110 score:
None	No IPR available	PANTHER	PTHR23335	CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA	coord: 1..110 score: 2.7
None	No IPR available	PANTHER	PTHR23335:SF1	CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4	coord: 1..110 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G013820	Cucsa.349690	Cucumber (Gy14) v1	cgycmoB0951
CmoCh17G013820	CmaCh17G014410	Cucurbita maxima (Rimu)	cmacmoB353
CmoCh17G013820	CmaCh08G001770	Cucurbita maxima (Rimu)	cmacmoB891
CmoCh17G013820	Csa6G095310	Cucumber (Chinese Long) v2	cmocuB358
CmoCh17G013820	CSPI06G07860	Wild cucumber (PI 183967)	cmocpiB361
CmoCh17G013820	Lsi09G017220	Bottle gourd (USVL1VR-Ls)	cmolsiB322
CmoCh17G013820	Cp4.1LG01g11810	Cucurbita pepo (Zucchini)	cmocpeB360
CmoCh17G013820	MELO3C022312.2	Melon (DHL92) v3.6.1	cmomedB353
CmoCh17G013820	CsaV3_6G008250	Cucumber (Chinese Long) v3	cmocucB0433
CmoCh17G013820	Cla97C06G111500	Watermelon (97103) v2	cmowmbB354
CmoCh17G013820	CsGy6G007910	Cucumber (Gy14) v2	cgybcmoB734
CmoCh17G013820	Carg11601	Silver-seed gourd	carcmoB0021
CmoCh17G013820	Carg05007	Silver-seed gourd	carcmoB0114

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh17G013820	CmoCh08G001800	Cucurbita moschata (Rifu)	cmocmoB315

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G013820	Wax gourd	cmowgoB0456
CmoCh17G013820	Wax gourd	cmowgoB0479
CmoCh17G013820	Melon (DHL92) v3.5.1	cmomeB308
CmoCh17G013820	Watermelon (Charleston Gray)	cmowcgB318
CmoCh17G013820	Watermelon (97103) v1	cmowmB347
CmoCh17G013820	Cucurbita pepo (Zucchini)	cmocpeB347