CmoCh17G012720 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCCTTCTCCCATTTCATCCTCTTTTCAGCCATTTTTGGGTGCTTTCTTTCACGCGCCAAATCCCTCACTTGCTCTTCTCAATCCTTCTCCAACAGATCCTTCGCCCACTGCGACGATCTCCCCCATCTCGACGCCTTTCTCCACTGGACCTACGATCCCAAAAATTCCTCTCTCTCCCTTGCTTTTCTCGCCTCTCCGCCGCATTCCGGCGGCTGGGTCTCCTGGGCCGTCAACCCCACTTCCACCGGTATGGCCGGAGCCCAGGCCTTTGTCGCCTCTGTTTCCGGGAAAGCCCCCTCTGTCCGTACCTTCAACATCTCCTCCTATTCCTCTGTTCTCCCCTCACTGAAACTCTCCTTCCTCGCCTGGGATCTCGCCGCCGAATATTCCAACGGTTGGTTCACTATCTTCGCTTCCGTTAAAGTTCCGCCCAAGGCTAAGTCGCTGAACCATGTCTGGCAAGTTGGACCGGAGGTCGACCCGGATACTGGTGTTCCTTCTGTTCATGAGTTTAAACCGGCTAATTTGAATGCCAAGAGCGTGTTGGTTTTTGATAAGAAGGGTGGTGCTAGTCCTGCCCCACATGCTCTCGGCGGTGAGTCTCCTGCACCGTCGCCAGCGGTTGTCGGCCTTAACGAAGCTGCCGCTTCCGCCACCGCGCCCAGCTCCGATAAGAGTGGAGTCGCCGGAGATAGAAGCCGGAATTTCGGGCTGGTTGCGGGTTGGTTTGTGTTTGTTTGGGGAATTATTAATTTCTGATTTTAATTTTAGAAAAAATAATAATAATAATACAAACTCCGTGACTCTGTGATTCAGATTTTTGGGTTTTTTTTTCTAATTATTATTTTTATTTATTTTGATTCCTCCGAATATATAAATAAATGATTTAATTTGATTACATTATGAACTTTGGATTATTTTAATAATAATATTATTATTATTAGATCCGTACCATTGGCTGAAAAAAATTATTATTATTATTAAGTATTAAAGTAATGTTTTCGAACCTATCGTAAAATCCAATAATGTTTAGAATGAATTATTAATAGAGCGGTGACATTTTAGTTTCTTATAAACGTAACTTTCTTAGCAATAAACTTTGTAGGGAATTTTTATTATGTGATGTGAAAGATAATAAATAATGTTGATATGTTATGATTATGATTTTTTGATAAGTGCAATATAAATATTACGAATAAATGAAAATTTTATATTAACGACTACCTGCTGAAGGACGAGATAGGAGTAGAACGAGTTTGACTTGCGAAGCTTTAGTGAGTAGGATAGGCCTACTCGTGACACCACCTGGGCACCACCATGACACTTACAATGTTGCTGCCAATAAGTTCAAACCTTACTATGGTTGCCAGATGCAAAATACTTACATGACTTCAAGACATATGACCCTCGTGTCTTGAATCGGGTCTCTAAAGATTTGACTATGGCACGATTATGACTGCTGTCTATGGAGATGATATTTCGTTAGATGAAATGCGTTGATGACCAAAGAGTATTATGTACGTCATTTATGTTGTAGAATGATGCACACATGTGGTGGCGATCAACGCAGGAAGTTCTTCGTCTTGGTGGAACTATAATCACATGACAATCGTTCAAATAAGAATTCCTATTCTAGGAAGAATATTAACTAAGCAAAGCCAAATTAAAGAAACAATAGAAATTCATTAGCTTGCTCCAAATTTGCCACTATGTTGGTGGAATTCACGAGATCGATGAGATTAACTCTAAATTGGCCAATACAAAGTCTAAGAACACAAAGAGATTCATCACGTGGTCCGAGGTTTCGTTACAGCCTTGATGCCAACTAATTATGTTGTTGCCCATAGAACAACTACAAATGATGACAAACGACCTAGTTAGGAGACTCCAGAGGCTAATAGTTTTAACAACTTCAGTAAGAAAAAAACAACTCTTTGACAAAATTGCATCAAACCCCAAGCCACCTTGACGCCCGTAGCAGGCAAGCAACCATACCATTTAGAAATAAAGGACAAATTCAACATCTCTGTCAATAGGGTTTACAGGGCCATATGGCTAGTTATCATCCAAAAAAACTATTGAAGACATTGTCAATTAGCCATCAAACTCAAGTGATGTATATAGACGTATGCAAATTCGTGAACAAGCAAAAGGGTATGCCTCCATCAGTAAGGACGTCGATAAGCCAAATACGATGGTAGTAAGTACTCTTTCTGTTCTCGAGTATCTTGGTATTGCATCGAAGTTGACCACTTTACTTAGAACACACAAATGAAAGTCAAAGTCAAACATTGTAACCGCAACATAAAAGAAAAAGAAAAGAAAAGAAGTTTTTATGGTAAGTAAGTTCCCACTCGCAATTCCCAAAATTAGTGGCACAAAAGTTGATCTTCCCCAACCTCCTAACGCCCCACTCCCTGTTCACCTTTATATATTCTCTCCCCATTTCCTCCTCTCTCCCACTCCCAATTTCTCTCCCATTTCTCTCCCATTTCCCCTCCAATGGCGTCCTCCCCCCATTTCATCCTCTTCTTAGCCCTCGCCGGAACCCTAATTTCACGCGCCCAATCCCTCACTTGCTCTTCCCAATCCTTCTCCAACAGATCCTTCACCCACTGCGACGATCTCCCCCATCTCGACGCCTTTCTCCACTGGACCTACGACCCCAAAAATTCCTCTCTCTCCCTCGCTTTTCTCGCCTCTCCGCCGCAATCCGCCGGCTGGGTCGCCTGGGCCGTCAACCCCACCTCCACCGGCATGGCCGGAGCCCAGGCCCTCGTCGCCTCTGTTTCCGGCAAATCCCCCACCGTCCGTACCTTCAACATCTCCTCCTACTCCTCTGTTGTCCCCTCACCGAAACTCTCCTTCCTCGTCTGGGGCCTCGCCGCCGAAGTTTCCGATGGTCGGTTCACTATCTTCGCCACCGTCAAAGTTCCGCCTAAAACCAAGTCGCTGAACCAGGTCTGGCAAGTTGGACCGGCGGTTGACCCGGATTCTGGTGTTCCTGTAGTTCATGAGTTCGAACAGGCTAATTTGAAGGCCACGGGCGTGTTGGAGTTTGATAAGAAGTCTAGTGCTAGTCCTGCCCCATATGCTCACGACGGCGCGTCTCCTGCACCTTCGCCAGCGGTTGTCGGTGTCAACGAAACTACCACTTCCACCACCGCGCCCAGCCCTGAAAAGAGTGGGGTCGCCGGAATTAGAAGCGGAAATTTGGGGCTGGTTGTGGGTTGGTTTGTGTTTGTTTGGGGAATTTTTAGTGTCTAA ATGGCGTCCTTCTCCCATTTCATCCTCTTTTCAGCCATTTTTGGGTGCTTTCTTTCACGCGCCAAATCCCTCACTTGCTCTTCTCAATCCTTCTCCAACAGATCCTTCGCCCACTGCGACGATCTCCCCCATCTCGACGCCTTTCTCCACTGGACCTACGATCCCAAAAATTCCTCTCTCTCCCTTGCTTTTCTCGCCTCTCCGCCGCATTCCGGCGGCTGGGTCTCCTGGGCCGTCAACCCCACTTCCACCGGTATGGCCGGAGCCCAGGCCTTTGTCGCCTCTGTTTCCGGGAAAGCCCCCTCTGTCCGTACCTTCAACATCTCCTCCTATTCCTCTGTTCTCCCCTCACTGAAACTCTCCTTCCTCGCCTGGGATCTCGCCGCCGAATATTCCAACGGTTGGTTCACTATCTTCGCTTCCGTTAAAGTTCCGCCCAAGGCTAAGTCGCTGAACCATGTCTGGCAAGTTGGACCGGAGGTCGACCCGGATACTGGTGTTCCTTCTGTTCATGAGTTTAAACCGGCTAATTTGAATGCCAAGAGCGTGTTGGTTTTTGATAAGAAGGGTGGTGCTAGTCCTGCCCCACATGCTCTCGGCGGTGAGTCTCCTGCACCGTCGCCAGCGGTTGTCGGCCTTAACGAAGCTGCCGCTTCCGCCACCGCGCCCAGCTCCGATAAGAGTGGAGTCGCCGGAGATAGAAGCCGGAATTTCGGGCTGGTTGCGGGTTGATCCTTCACCCACTGCGACGATCTCCCCCATCTCGACGCCTTTCTCCACTGGACCTACGACCCCAAAAATTCCTCTCTCTCCCTCGCTTTTCTCGCCTCTCCGCCGCAATCCGCCGGCTGGGTCGCCTGGGCCGTCAACCCCACCTCCACCGGCATGGCCGGAGCCCAGGCCCTCGTCGCCTCTGTTTCCGGCAAATCCCCCACCGTCCGTACCTTCAACATCTCCTCCTACTCCTCTGTTGTCCCCTCACCGAAACTCTCCTTCCTCGTCTGGGGCCTCGCCGCCGAAGTTTCCGATGGTCGGTTCACTATCTTCGCCACCGTCAAAGTTCCGCCTAAAACCAAGTCGCTGAACCAGGTCTGGCAAGTTGGACCGGCGGTTGACCCGGATTCTGGTGTTCCTGTAGTTCATGAGTTCGAACAGGCTAATTTGAAGGCCACGGGCGTGTTGGAGTTTGATAAGAAGTCTAGTGCTAGTCCTGCCCCATATGCTCACGACGGCGCGTCTCCTGCACCTTCGCCAGCGGTTGTCGGTGTCAACGAAACTACCACTTCCACCACCGCGCCCAGCCCTGAAAAGAGTGGGGTCGCCGGAATTAGAAGCGGAAATTTGGGGCTGGTTGTGGGTTGGTTTGTGTTTGTTTGGGGAATTTTTAGTGTCTAA ATGGCGTCCTTCTCCCATTTCATCCTCTTTTCAGCCATTTTTGGGTGCTTTCTTTCACGCGCCAAATCCCTCACTTGCTCTTCTCAATCCTTCTCCAACAGATCCTTCGCCCACTGCGACGATCTCCCCCATCTCGACGCCTTTCTCCACTGGACCTACGATCCCAAAAATTCCTCTCTCTCCCTTGCTTTTCTCGCCTCTCCGCCGCATTCCGGCGGCTGGGTCTCCTGGGCCGTCAACCCCACTTCCACCGGTATGGCCGGAGCCCAGGCCTTTGTCGCCTCTGTTTCCGGGAAAGCCCCCTCTGTCCGTACCTTCAACATCTCCTCCTATTCCTCTGTTCTCCCCTCACTGAAACTCTCCTTCCTCGCCTGGGATCTCGCCGCCGAATATTCCAACGGTTGGTTCACTATCTTCGCTTCCGTTAAAGTTCCGCCCAAGGCTAAGTCGCTGAACCATGTCTGGCAAGTTGGACCGGAGGTCGACCCGGATACTGGTGTTCCTTCTGTTCATGAGTTTAAACCGGCTAATTTGAATGCCAAGAGCGTGTTGGTTTTTGATAAGAAGGGTGGTGCTAGTCCTGCCCCACATGCTCTCGGCGGTGAGTCTCCTGCACCGTCGCCAGCGGTTGTCGGCCTTAACGAAGCTGCCGCTTCCGCCACCGCGCCCAGCTCCGATAAGAGTGGAGTCGCCGGAGATAGAAGCCGGAATTTCGGGCTGGTTGCGGGTTGA
BLAST of CmoCh17G012720 vs. Swiss-Prot
Match: AIR12_ARATH (Auxin-induced in root cultures protein 12 OS=Arabidopsis thaliana GN=AIR12 PE=1 SV=3) HSP 1 Score: 157.9 bits (398), Expect = 1.4e-37 Identity = 111/254 (43.70%), Postives = 151/254 (59.45%), Query Frame = 1
BLAST of CmoCh17G012720 vs. Swiss-Prot
Match: B561O_ARATH (Cytochrome b561 and DOMON domain-containing protein At4g12980 OS=Arabidopsis thaliana GN=At4g12980 PE=2 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 7.9e-33 Identity = 91/190 (47.89%), Postives = 115/190 (60.53%), Query Frame = 1
BLAST of CmoCh17G012720 vs. Swiss-Prot
Match: B561C_ARATH (Cytochrome b561 and DOMON domain-containing protein At3g25290 OS=Arabidopsis thaliana GN=At3g25290 PE=2 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 3.9e-32 Identity = 97/211 (45.97%), Postives = 126/211 (59.72%), Query Frame = 1
BLAST of CmoCh17G012720 vs. Swiss-Prot
Match: B561H_ARATH (Cytochrome b561 and DOMON domain-containing protein At3g59070 OS=Arabidopsis thaliana GN=At3g59070 PE=3 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 7.4e-23 Identity = 61/142 (42.96%), Postives = 86/142 (60.56%), Query Frame = 1
BLAST of CmoCh17G012720 vs. Swiss-Prot
Match: B561P_ARATH (Cytochrome b561 and DOMON domain-containing protein At5g35735 OS=Arabidopsis thaliana GN=At5g35735 PE=2 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.8e-22 Identity = 63/171 (36.84%), Postives = 98/171 (57.31%), Query Frame = 1
BLAST of CmoCh17G012720 vs. TrEMBL
Match: A0A0A0K5A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368155 PE=4 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 3.4e-67 Identity = 148/249 (59.44%), Postives = 180/249 (72.29%), Query Frame = 1
BLAST of CmoCh17G012720 vs. TrEMBL
Match: M5W7R0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021935mg PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 2.0e-43 Identity = 96/191 (50.26%), Postives = 132/191 (69.11%), Query Frame = 1
BLAST of CmoCh17G012720 vs. TrEMBL
Match: M5VVB4_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023151mg PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 2.6e-43 Identity = 91/177 (51.41%), Postives = 127/177 (71.75%), Query Frame = 1
BLAST of CmoCh17G012720 vs. TrEMBL
Match: W9S2Q1_9ROSA (Auxin-induced in root cultures protein 12 OS=Morus notabilis GN=L484_015833 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 4.5e-43 Identity = 95/169 (56.21%), Postives = 120/169 (71.01%), Query Frame = 1
BLAST of CmoCh17G012720 vs. TrEMBL
Match: A0A0A0K8G6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368150 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 4.5e-43 Identity = 102/186 (54.84%), Postives = 126/186 (67.74%), Query Frame = 1
BLAST of CmoCh17G012720 vs. TAIR10
Match: AT3G07390.1 (AT3G07390.1 auxin-responsive family protein) HSP 1 Score: 157.9 bits (398), Expect = 7.8e-39 Identity = 111/254 (43.70%), Postives = 151/254 (59.45%), Query Frame = 1
BLAST of CmoCh17G012720 vs. TAIR10
Match: AT4G12980.1 (AT4G12980.1 Auxin-responsive family protein) HSP 1 Score: 142.1 bits (357), Expect = 4.4e-34 Identity = 91/190 (47.89%), Postives = 115/190 (60.53%), Query Frame = 1
BLAST of CmoCh17G012720 vs. TAIR10
Match: AT3G25290.1 (AT3G25290.1 Auxin-responsive family protein) HSP 1 Score: 139.8 bits (351), Expect = 2.2e-33 Identity = 97/211 (45.97%), Postives = 126/211 (59.72%), Query Frame = 1
BLAST of CmoCh17G012720 vs. TAIR10
Match: AT3G59070.1 (AT3G59070.1 Cytochrome b561/ferric reductase transmembrane with DOMON related domain) HSP 1 Score: 109.0 bits (271), Expect = 4.2e-24 Identity = 61/142 (42.96%), Postives = 86/142 (60.56%), Query Frame = 1
BLAST of CmoCh17G012720 vs. TAIR10
Match: AT5G35735.1 (AT5G35735.1 Auxin-responsive family protein) HSP 1 Score: 107.1 bits (266), Expect = 1.6e-23 Identity = 63/171 (36.84%), Postives = 98/171 (57.31%), Query Frame = 1
BLAST of CmoCh17G012720 vs. NCBI nr
Match: gi|700189430|gb|KGN44663.1| (hypothetical protein Csa_7G368155 [Cucumis sativus]) HSP 1 Score: 263.1 bits (671), Expect = 4.9e-67 Identity = 148/249 (59.44%), Postives = 180/249 (72.29%), Query Frame = 1
BLAST of CmoCh17G012720 vs. NCBI nr
Match: gi|658057145|ref|XP_008364338.1| (PREDICTED: auxin-induced in root cultures protein 12-like [Malus domestica]) HSP 1 Score: 186.8 bits (473), Expect = 4.5e-44 Identity = 88/164 (53.66%), Postives = 123/164 (75.00%), Query Frame = 1
BLAST of CmoCh17G012720 vs. NCBI nr
Match: gi|645279395|ref|XP_008244699.1| (PREDICTED: auxin-induced in root cultures protein 12-like [Prunus mume]) HSP 1 Score: 184.9 bits (468), Expect = 1.7e-43 Identity = 98/191 (51.31%), Postives = 133/191 (69.63%), Query Frame = 1
BLAST of CmoCh17G012720 vs. NCBI nr
Match: gi|595800230|ref|XP_007201646.1| (hypothetical protein PRUPE_ppa021935mg [Prunus persica]) HSP 1 Score: 184.1 bits (466), Expect = 2.9e-43 Identity = 96/191 (50.26%), Postives = 132/191 (69.11%), Query Frame = 1
BLAST of CmoCh17G012720 vs. NCBI nr
Match: gi|1009149452|ref|XP_015892486.1| (PREDICTED: auxin-induced in root cultures protein 12 [Ziziphus jujuba]) HSP 1 Score: 183.7 bits (465), Expect = 3.8e-43 Identity = 92/169 (54.44%), Postives = 121/169 (71.60%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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