CmoCh17G005420 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G005420
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	WRKY transcription factor 6
Location	Cmo_Chr17 : 5360801 .. 5362047 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCTTATAATAATATCCCTCCTTCCTTCCCTTCTCCCACCACCCACCACCATGGAACTTACGCCTCTAATCCAAGAGCTCAACCAAGGCAAACACCTCGCTAACCAACTCCGAACCCATCTCCATCTTTCTTCTTCCTCCCATGCCGTTCACCTCATCCATCAGATTCTTCGTTCCTACGACAACGCCCTTCTCTCTCTCGAATCCACCCCTGTTCCGACCAATGCGCCTGTGAAAAACAGAGACGTCTCCAAGAAGAGGTAATTCCTGTGTTTCCCACTGCTCGTTGTTGTTGTTGATTCCAAATTCTTATTGGGTTTTTGGGGATTTGGGTTTTGCAGAAAGGTAATGCCCAAATGGAGTGAGCGGGTTAAGGTTGCTTCTGCCTCTGCCTCTGCCGTTGAAGGCCCTCTTCATGATGGGTTTAGCTGGAGAAAGTATGGCCAAAAGGACATTCTTGGATCCAAATTCCCCAGGTTCTTACCGATTCAAACTTCTAAGCTTCTTCTCTTCTGGGTTTTAGAGGTTTGTATTTGGGTTTGGTGGATTGACATTTTGTTATTATGCAGAGGCTATTTTAGATGCTCGCATCGCTTTACCTTGGGATGTAAAGCAACAAAACAAGTTCAAAAATCAGACACTGATCCAACAATTTACGAGGTAACCTACAAAGGAACACACACTTGCAACAGACCTCTTCATTCCAAAACACAACAACAACAACACCACCAAAAGCCTTCATTGCAACACCCAATGCCACCAAAACAAGAACAAAGGCCAGATGATGATGAGCCTTCATGTCAATCCTTCAGCCCAGAAGTAGCAGCCATTCATGTCAAATCCGAGATGTTCGACGATATCGATATTGACAATGGTTTCTGTCGACCTTTACGTCCTCCATCATTGTTGTTTGAATCTGAAGTTCAAGATGATGATCAAAGCCCTTTTAGAGAAAGTGAGTGGTTTGGATTGTGTTGTGATTTCGAAACCGGGGTTGTGTCGATTCCGAATTCGGTGACTAATAATATTTGCATTGAAGAGTTGGAGGAGTATTGTAGTTTTGATAATCTGGAGTTGTTCTGTTGAAATTGTGTTGTTTTCTCACCTCCCAAACAAACAAAGAGGGAAAGGAAAGAAAAGATTGTGAATTAGTAGTCCGTAGGAGAAAATAGGAATATTGTAAGTTTCTTAGCACTTGTGAATTTGAATAAAGTTAAGAAGAAGAATAGATTTAAATGCAAATGTG

mRNA sequence

TTCCCTTATAATAATATCCCTCCTTCCTTCCCTTCTCCCACCACCCACCACCATGGAACTTACGCCTCTAATCCAAGAGCTCAACCAAGGCAAACACCTCGCTAACCAACTCCGAACCCATCTCCATCTTTCTTCTTCCTCCCATGCCGTTCACCTCATCCATCAGATTCTTCGTTCCTACGACAACGCCCTTCTCTCTCTCGAATCCACCCCTGTTCCGACCAATGCGCCTGTGAAAAACAGAGACGTCTCCAAGAAGAGAAAGGTAATGCCCAAATGGAGTGAGCGGGTTAAGGTTGCTTCTGCCTCTGCCTCTGCCGTTGAAGGCCCTCTTCATGATGGGTTTAGCTGGAGAAAGTATGGCCAAAAGGACATTCTTGGATCCAAATTCCCCAGAGGCTATTTTAGATGCTCGCATCGCTTTACCTTGGGATGTAAAGCAACAAAACAAGTTCAAAAATCAGACACTGATCCAACAATTTACGAGGTAACCTACAAAGGAACACACACTTGCAACAGACCTCTTCATTCCAAAACACAACAACAACAACACCACCAAAAGCCTTCATTGCAACACCCAATGCCACCAAAACAAGAACAAAGGCCAGATGATGATGAGCCTTCATGTCAATCCTTCAGCCCAGAAGTAGCAGCCATTCATGTCAAATCCGAGATGTTCGACGATATCGATATTGACAATGGTTTCTGTCGACCTTTACGTCCTCCATCATTGTTGTTTGAATCTGAAGTTCAAGATGATGATCAAAGCCCTTTTAGAGAAAGTGAGTGGTTTGGATTGTGTTGTGATTTCGAAACCGGGGTTGTGTCGATTCCGAATTCGGTGACTAATAATATTTGCATTGAAGAGTTGGAGGAGTATTGTAGTTTTGATAATCTGGAGTTGTTCTGTTGAAATTGTGTTGTTTTCTCACCTCCCAAACAAACAAAGAGGGAAAGGAAAGAAAAGATTGTGAATTAGTAGTCCGTAGGAGAAAATAGGAATATTGTAAGTTTCTTAGCACTTGTGAATTTGAATAAAGTTAAGAAGAAGAATAGATTTAAATGCAAATGTG

Coding sequence (CDS)

ATGGAACTTACGCCTCTAATCCAAGAGCTCAACCAAGGCAAACACCTCGCTAACCAACTCCGAACCCATCTCCATCTTTCTTCTTCCTCCCATGCCGTTCACCTCATCCATCAGATTCTTCGTTCCTACGACAACGCCCTTCTCTCTCTCGAATCCACCCCTGTTCCGACCAATGCGCCTGTGAAAAACAGAGACGTCTCCAAGAAGAGAAAGGTAATGCCCAAATGGAGTGAGCGGGTTAAGGTTGCTTCTGCCTCTGCCTCTGCCGTTGAAGGCCCTCTTCATGATGGGTTTAGCTGGAGAAAGTATGGCCAAAAGGACATTCTTGGATCCAAATTCCCCAGAGGCTATTTTAGATGCTCGCATCGCTTTACCTTGGGATGTAAAGCAACAAAACAAGTTCAAAAATCAGACACTGATCCAACAATTTACGAGGTAACCTACAAAGGAACACACACTTGCAACAGACCTCTTCATTCCAAAACACAACAACAACAACACCACCAAAAGCCTTCATTGCAACACCCAATGCCACCAAAACAAGAACAAAGGCCAGATGATGATGAGCCTTCATGTCAATCCTTCAGCCCAGAAGTAGCAGCCATTCATGTCAAATCCGAGATGTTCGACGATATCGATATTGACAATGGTTTCTGTCGACCTTTACGTCCTCCATCATTGTTGTTTGAATCTGAAGTTCAAGATGATGATCAAAGCCCTTTTAGAGAAAGTGAGTGGTTTGGATTGTGTTGTGATTTCGAAACCGGGGTTGTGTCGATTCCGAATTCGGTGACTAATAATATTTGCATTGAAGAGTTGGAGGAGTATTGTAGTTTTGATAATCTGGAGTTGTTCTGTTGA

Homology

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BLAST of CmoCh17G005420 vs. Swiss-Prot
Match: WRK46_ARATH (Probable WRKY transcription factor 46 OS=Arabidopsis thaliana GN=WRKY46 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.6e-30
Identity = 82/170 (48.24%), Postives = 101/170 (59.41%), Query Frame = 1


Query: 1   MELTPLIQELNQGKHLANQLRTHL-HLSSSSHAVHLIHQILRSYDNALLSL----ESTPV 60
           ME   +I EL  GK LAN+L  +L H SS      LI  ILR Y NA+  L    +   +
Sbjct: 3   MEEKLVINELELGKELANRLMNNLKHTSSVDSNKTLISDILRIYQNAIFMLSFNQDKNIL 62

Query: 61  PTNAPVKNRD---VSKKRKVMPKWSERVKVASASASAVEGPLHDGFSWRKYGQKDILGSK 120
             +  +  +D   V KKRKV  K +E+VKV  A+     G + DG  WRKYGQK+I GSK
Sbjct: 63  KRSLEIDGKDSKNVFKKRKVSEKNTEKVKVFVATEQE-NGSIDDGHCWRKYGQKEIHGSK 122

Query: 121 FPRGYFRCSHRFTLGCKATKQVQKSDTDPTIYEVTYKGTHTCNRPLHSKT 163
            PR Y+RC+HRFT  C A KQVQKSDTDP+++EV Y G HTCN     KT
Sbjct: 123 NPRAYYRCTHRFTQDCLAVKQVQKSDTDPSLFEVKYLGNHTCNNITSPKT 171

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BLAST of CmoCh17G005420 vs. Swiss-Prot
Match: WRK53_ARATH (Probable WRKY transcription factor 53 OS=Arabidopsis thaliana GN=WRKY53 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-29
Identity = 83/199 (41.71%), Postives = 115/199 (57.79%), Query Frame = 1


Query: 67  SKKRKVMPKWSERVKVASASASAVEGPLHDGFSWRKYGQKDILGSKFPRGYFRCSHRFTL 126
           SKKRK++PKWSE+V+++      +EGP  D FSWRKYGQKDILG+KFPR Y+RC+HR T 
Sbjct: 132 SKKRKMLPKWSEKVRISPERG--LEGPQDDVFSWRKYGQKDILGAKFPRSYYRCTHRSTQ 191

Query: 127 GCKATKQVQKSDTDPTIYEVTYKGTHTCNR------PLHSKTQQQQHHQKPSLQHPMPPK 186
            C ATKQVQ+SD D T++EVTY+GTHTC++      PL S  ++Q    KP++       
Sbjct: 192 NCWATKQVQRSDGDATVFEVTYRGTHTCSQAITRTPPLASPEKRQDTRVKPAI------- 251

Query: 187 QEQRPDDDEPSCQSFSPEVAAIHVKSEMFDDIDIDNGFCRPLRPPSLLF---ESEVQDDD 246
             Q+P D   S +S       + V+++  D  D  + F  P  PP   +     E    +
Sbjct: 252 -TQKPKDILESLKS------NLTVRTDGLD--DGKDVFSFPDTPPFYNYGTINGEFGHVE 311

Query: 247 QSP-FRESEWFGLCCDFET 256
            SP F   +WF    + +T
Sbjct: 312 SSPIFDVVDWFNPTVEIDT 312

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BLAST of CmoCh17G005420 vs. Swiss-Prot
Match: WRK41_ARATH (Probable WRKY transcription factor 41 OS=Arabidopsis thaliana GN=WRKY41 PE=2 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 1.2e-27
Identity = 86/212 (40.57%), Postives = 118/212 (55.66%), Query Frame = 1


Query: 2   ELTPLIQELNQGKHLANQLR--THLHLSSSSHAV------HLIHQILRSYDNALLSL--- 61
           E   L+ EL  G   A QL+  +   LS+SS  +      +L+H I+ S+  A+L L   
Sbjct: 7   ERRSLLNELIHGLKAAKQLQGSSSPSLSASSSYLTTEIKENLLHNIVSSFKKAILMLNGS 66

Query: 62  --------ESTPVPTNAP---------------------VKNRDV---SKKRKVMPKWSE 121
                   E  P P   P                     V++++    SKKRK++PKW+E
Sbjct: 67  TTQHNPTIELAPDPLAHPGKVPGSPASITGNPRSEEFFNVRSKEFNLSSKKRKMLPKWTE 126

Query: 122 RVKVASASASAVEGPLHDGFSWRKYGQKDILGSKFPRGYFRCSHRFTLGCKATKQVQKSD 169
           +V+++      +EGP  D FSWRKYGQKDILG+KFPR Y+RC+ R T  C ATKQVQ+SD
Sbjct: 127 QVRISPERG--LEGPHDDIFSWRKYGQKDILGAKFPRSYYRCTFRNTQYCWATKQVQRSD 186

[Close]

BLAST of CmoCh17G005420 vs. Swiss-Prot
Match: WRK30_ARATH (Probable WRKY transcription factor 30 OS=Arabidopsis thaliana GN=WRKY30 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.5e-24
Identity = 63/173 (36.42%), Postives = 102/173 (58.96%), Query Frame = 1


Query: 12  QGKHLANQLRTHLHLSSSSHAVHLIHQILRSYDNALLSLE------------STPVPTNA 71
           +G+  A+Q  +    SS     HL  +IL+SY  +L  +              +P   ++
Sbjct: 23  EGRDYAHQFGS---ASSQETREHLAKKILQSYHKSLTIMNYSGELDQVSQGGGSPKSDDS 82

Query: 72  PVKNRDVSKKRKVMPKWSERVKVASASASAVEGPLHDGFSWRKYGQKDILGSKFPRGYFR 131
             +   +   +K MP+WS +V++A  +   V+  L DGFSWRKYGQKDILG+KFPRGY+R
Sbjct: 83  DQEPLVIKSSKKSMPRWSSKVRIAPGAG--VDRTLDDGFSWRKYGQKDILGAKFPRGYYR 142

Query: 132 CSHRFTLGCKATKQVQKSDTDPTIYEVTYKGTHTCNRPLHSKTQQQQHHQKPS 173
           C++R + GC+ATKQVQ+SD +  + E++Y+G H+C++  +  T     + +P+
Sbjct: 143 CTYRKSQGCEATKQVQRSDENQMLLEISYRGIHSCSQAANVGTTMPIQNLEPN 190

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BLAST of CmoCh17G005420 vs. Swiss-Prot
Match: WRK70_ARATH (Probable WRKY transcription factor 70 OS=Arabidopsis thaliana GN=WRKY70 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.0e-20
Identity = 59/135 (43.70%), Postives = 77/135 (57.04%), Query Frame = 1


Query: 60  PVKNRDVSKKRKVMPKWSERVKVASASASAVEGPLHDGFSWRKYGQKDILGSKFPRGYFR 119
           PVK +    KRK   K SE   + S         L D FSWRKYGQK+IL +KFPR YFR
Sbjct: 95  PVKGKRGCYKRK---KRSETCTIESTI-------LEDAFSWRKYGQKEILNAKFPRSYFR 154

Query: 120 CSHRFTLGCKATKQVQKSDTDPTIYEVTYKGTHTCNRPLHS-KTQQQQHHQK---PSLQH 179
           C+H++T GCKATKQVQK + +P ++ +TY G HTCN    + K++   HH +    S  H
Sbjct: 155 CTHKYTQGCKATKQVQKVELEPKMFSITYIGNHTCNTNAETPKSKTCDHHDEIFMDSEDH 214

Query: 180 PMPPKQEQRPDDDEP 191
             P       ++D P
Sbjct: 215 KSPSLSTSMKEEDNP 219

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BLAST of CmoCh17G005420 vs. TrEMBL
Match: E7CEY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=WRKY50 PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.0e-87
Identity = 198/306 (64.71%), Postives = 219/306 (71.57%), Query Frame = 1


Query: 1   MELTPLIQELNQGKHLANQLRTHLHLSSSSHAVHLIHQILRSYDNALLSLE--------S 60
           ME   LIQELNQGK LANQLRTHLH SSSSH + LI +ILRSY+NALL+L         S
Sbjct: 1   MEFLSLIQELNQGKQLANQLRTHLHPSSSSHGILLIDKILRSYENALLALSGGAAASVNS 60

Query: 61  TPVPTNAPVKNRDVSKKRKVMPKWSERVKVASASASAVEGPLHDGFSWRKYGQKDILGSK 120
              P NA V++ DVSKKRKVM KWSE+VKV+SASA  VEGP  DGFSWRKYGQKDILGSK
Sbjct: 61  AIAPVNAAVQDGDVSKKRKVMAKWSEQVKVSSASA--VEGPGCDGFSWRKYGQKDILGSK 120

Query: 121 FPRGYFRCSHRFTLGCKATKQVQKSDTDPTIYEVTYKGTHTCNRPLHSKTQQQQHHQKPS 180
           FPR YFRCSHRFT GC ATKQVQKSD DPTIYEVTYKG HTCN+ LHS T   Q HQ   
Sbjct: 121 FPRSYFRCSHRFTQGCLATKQVQKSDNDPTIYEVTYKGRHTCNKALHS-TNTPQEHQNTF 180

Query: 181 LQHPMPPKQEQRPDDD--EPSCQSFSPEVAAIHVKSEMFDDIDIDN-GFCRPLRPPSLLF 240
           LQHP+PPKQE +P     +P C  FS +   I VKSE   D++  N G  +PLR PS +F
Sbjct: 181 LQHPIPPKQEDKPLQQLHDPLCFMFSSD--PIRVKSE---DLEYANGGLFQPLRTPSPMF 240

Query: 241 ESEVQDDDQSPFRESE---------WFGLCCDFETGVVSIPNSVTNNICIEELEEYCSFD 287
            SEVQ DD SPFRESE          FGL CDFET  VSIP+S+T NI I +LEE  SFD
Sbjct: 241 GSEVQ-DDLSPFRESECSPTFESNDMFGLWCDFETEFVSIPSSMT-NISIGDLEECFSFD 296

[Close]

BLAST of CmoCh17G005420 vs. TrEMBL
Match: A0A0D2TD13_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G107300 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 8.7e-38
Identity = 126/340 (37.06%), Postives = 174/340 (51.18%), Query Frame = 1


Query: 1   MELTPLIQELNQGKHLANQLRTHLHLSSSSHA-VHLIHQILRSYDNALL----------- 60
           ME   L+ EL +G+ + N L  HLHL SS    + LI +IL SY+NAL            
Sbjct: 1   MEQGALLNELKEGREVTNLLMKHLHLPSSYQTRLVLIEKILGSYENALSILNCNGLVVET 60

Query: 61  -----SLESTPVPTNAPVKNRDVSKKRKVMPKWSERVKVASASASAVEGPLHDGFSWRKY 120
                ++ES P   ++    RDV KKRK    W+E+++V S ++  ++ P+ DGF WRKY
Sbjct: 61  RPSLSTMESLPSIDHSSPDKRDVFKKRKTSSGWTEQLRVCSGTS--LDNPVDDGFCWRKY 120

Query: 121 GQKDILGSKFPRGYFRCSHRFTLGCKATKQVQKSDTDPTIYEVTYKGTHTCNRPLH---- 180
           GQK ILGS FPRGY+RC+HR + GC A KQVQKS+ DPTI+EV YKG HTCN+  H    
Sbjct: 121 GQKAILGSNFPRGYYRCTHRHSQGCLAIKQVQKSNDDPTIFEVKYKGRHTCNQTSHFAAT 180

Query: 181 ----SKTQQQQHHQKPSLQHPMPPKQEQRPDDDEPSCQSFSPEVAAIHVKSEMFDD-IDI 240
               S   + + +  P  QH +  KQ+Q       + Q+FS   + I VK+E  D+  DI
Sbjct: 181 YVSVSTESENEGNYSPKRQHQLEVKQKQ-------AQQAFSSFGSGIKVKTEDLDNREDI 240

Query: 241 DNGFCRPLRPPSL--------LFESEVQDDDQSPF-----RESEWFGLC-C---DFE--- 286
              F  P+    +        L E+E+  +    F      ES +F +  C    FE   
Sbjct: 241 FPSFPFPVESEQVKNGSFVEALMENEIMGNLSPAFISPATSESNYFSMSPCHMGSFESDL 300

[Close]

BLAST of CmoCh17G005420 vs. TrEMBL
Match: W9RNA2_9ROSA (Putative WRKY transcription factor 46 OS=Morus notabilis GN=L484_017596 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.9e-37
Identity = 111/307 (36.16%), Postives = 160/307 (52.12%), Query Frame = 1


Query: 1   MELTPLIQELNQGKHLANQLRTHLH-LSSSSHAVHLIHQILRSYDNALLSLESTPVPTNA 60
           +E   LI EL QGK LA QL  HL   SS      L+ +IL SY+ AL  L+++    + 
Sbjct: 7   LEQKTLINELIQGKELAKQLMNHLQPFSSPEKRNFLVGKILSSYEKALSMLKTSGTDQSK 66

Query: 61  PV---------------------KNRDVSKKRKVMPKWSERVKVASASASAVEGPLHDGF 120
           P                      K+RDV KKRKV+P+W+E+VKV   +    EGPL DG+
Sbjct: 67  PFESPHSLDNTSPRSVIFDQDYSKHRDVFKKRKVLPRWTEQVKVCMGTGP--EGPLEDGY 126

Query: 121 SWRKYGQKDILGSKFPRGYFRCSHRFTLGCKATKQVQKSDTDPTIYEVTYKGTHTCNR-- 180
           SWRKYGQKDILG+  PRGY+RC+ R   GC ATKQVQ+SD D +++EVTY+G HTC+R  
Sbjct: 127 SWRKYGQKDILGANHPRGYYRCTRRNAQGCLATKQVQRSDQDSSLFEVTYRGRHTCSRAP 186

Query: 181 --PLHSKTQQQQHHQKPSLQHPMPPKQEQRPDDDEPSCQSFSPEVAAIHVKSEMFDDIDI 240
              + S     +H  K       P  +EQ  ++++P      P+   + VK+E FD  +I
Sbjct: 187 QLAMASANSLPKHGLKAENNDQFPTHEEQDQEEEKPK----QPQATGLGVKTEDFDTNNI 246

Query: 241 DNGFCRPLRPPSLLFESEVQDDD--QSPFRESEWFGLCCDFETGVVSIPNSVTNNICIEE 280
           ++G  R +  P     + ++ D+  +  F +    G+   F    VS   S + ++ +  
Sbjct: 247 EDG--RGIFQPFSFLSTPIESDNVGRDFFSDIVENGIAGPFSPPFVSPAGSESTSLSVSP 305

[Close]

BLAST of CmoCh17G005420 vs. TrEMBL
Match: A0A0A7E9T7_GOSAI (WRKY90 OS=Gossypium aridum PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 5.7e-37
Identity = 123/340 (36.18%), Postives = 174/340 (51.18%), Query Frame = 1


Query: 1   MELTPLIQELNQGKHLANQLRTHLHLSSSSHA-VHLIHQILRSYDNALL----------- 60
           ME   L+ EL +G+ + N L  HLHL SS    + LI +IL SY+N+L            
Sbjct: 1   MEQEALLNELKEGREVTNLLMKHLHLPSSHQTRLVLIEKILGSYENSLSILNCNGLVVET 60

Query: 61  -----SLESTPVPTNAPVKNRDVSKKRKVMPKWSERVKVASASASAVEGPLHDGFSWRKY 120
                ++ES P   ++    RDV KKRK    W+E+++  + S ++++ P+ DGF WRKY
Sbjct: 61  KPSLSTMESLPSIDHSSPDKRDVFKKRKTSSGWTEQLR--ACSGTSLDNPVDDGFCWRKY 120

Query: 121 GQKDILGSKFPRGYFRCSHRFTLGCKATKQVQKSDTDPTIYEVTYKGTHTCNRPLH---- 180
           GQK ILGS FPRGY+RC+HR + GC A KQVQKS+ DPTI+EV YKG HTCN+  H    
Sbjct: 121 GQKAILGSNFPRGYYRCTHRHSQGCLAIKQVQKSNDDPTIFEVKYKGRHTCNQTSHFAAT 180

Query: 181 ----SKTQQQQHHQKPSLQHPMPPKQEQRPDDDEPSCQSFSPEVAAIHVKSEMFDD-IDI 240
               S   + + +  P  QH +  KQ+Q       + Q+FS   + I VK+E  D+  DI
Sbjct: 181 YVSVSTESENEGNYSPKRQHQLEVKQKQ-------AQQAFSSFGSGIKVKTEDLDNREDI 240

Query: 241 DNGFCRPLRPPSL--------LFESEVQDDDQSPF-----RESEWFGLC-C---DFE--- 286
              F  P+    +        L E+++  +    F      ES +F +  C    FE   
Sbjct: 241 FPSFPFPVESEQVKNGSFVEALMENDIMGNLSPAFMSPATSESNYFSMSPCHMGSFESDL 300

[Close]

BLAST of CmoCh17G005420 vs. TrEMBL
Match: A0A068LD57_GOSHI (WRKY transcription factor 50 OS=Gossypium hirsutum GN=WRKY50 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.4e-37
Identity = 125/342 (36.55%), Postives = 173/342 (50.58%), Query Frame = 1


Query: 1   MELTPLIQELNQGKHLANQLRTHLHL---SSSSHAVHLIHQILRSYDNALL--------- 60
           ME   L+ EL +G+ + N L  HLHL   SS    + LI +IL SY+NAL          
Sbjct: 1   MEQGALLNELKEGREVTNLLMKHLHLHLPSSHQTGLVLIEKILGSYENALSILNCNGLVV 60

Query: 61  -------SLESTPVPTNAPVKNRDVSKKRKVMPKWSERVKVASASASAVEGPLHDGFSWR 120
                  ++ES P   ++    RDV KKRK    W+E+++V S +   ++ P+ DGF WR
Sbjct: 61  ETKPSLSTMESLPSIDHSSPDKRDVFKKRKTSSGWTEQLRVRSGTP--LDNPVDDGFCWR 120

Query: 121 KYGQKDILGSKFPRGYFRCSHRFTLGCKATKQVQKSDTDPTIYEVTYKGTHTCNRPLH-- 180
           KYGQK ILGS FPRGY+RC+HR + GC A KQVQKS+ DPTI+EV YKG HTCN+  H  
Sbjct: 121 KYGQKAILGSNFPRGYYRCTHRHSQGCLAIKQVQKSNDDPTIFEVKYKGRHTCNQTSHFA 180

Query: 181 ------SKTQQQQHHQKPSLQHPMPPKQEQRPDDDEPSCQSFSPEVAAIHVKSEMFDD-I 240
                 S   + + +  P  QH +  KQ+Q       + Q+FS   + I VK+E  D+  
Sbjct: 181 ATYVSVSTESENEGNYSPKRQHQLEVKQKQ-------AQQAFSSFGSGIKVKTEDLDNRE 240

Query: 241 DIDNGFCRPLRPPSL--------LFESEVQDDDQSPF-----RESEWFGLC-C---DFE- 286
           DI   F  P+    +        L E+++  +    F      ES +F +  C    FE 
Sbjct: 241 DIFPSFPFPVESEQVKNGSFVEALMENDIMGNLSPAFISPATSESNYFSMSPCHMGSFES 300

[Close]

BLAST of CmoCh17G005420 vs. TAIR10
Match: AT2G46400.1 (AT2G46400.1 WRKY DNA-binding protein 46)

HSP 1 Score: 132.9 bits (333), Expect = 3.2e-31
Identity = 82/170 (48.24%), Postives = 101/170 (59.41%), Query Frame = 1


Query: 1   MELTPLIQELNQGKHLANQLRTHL-HLSSSSHAVHLIHQILRSYDNALLSL----ESTPV 60
           ME   +I EL  GK LAN+L  +L H SS      LI  ILR Y NA+  L    +   +
Sbjct: 3   MEEKLVINELELGKELANRLMNNLKHTSSVDSNKTLISDILRIYQNAIFMLSFNQDKNIL 62

Query: 61  PTNAPVKNRD---VSKKRKVMPKWSERVKVASASASAVEGPLHDGFSWRKYGQKDILGSK 120
             +  +  +D   V KKRKV  K +E+VKV  A+     G + DG  WRKYGQK+I GSK
Sbjct: 63  KRSLEIDGKDSKNVFKKRKVSEKNTEKVKVFVATEQE-NGSIDDGHCWRKYGQKEIHGSK 122

Query: 121 FPRGYFRCSHRFTLGCKATKQVQKSDTDPTIYEVTYKGTHTCNRPLHSKT 163
            PR Y+RC+HRFT  C A KQVQKSDTDP+++EV Y G HTCN     KT
Sbjct: 123 NPRAYYRCTHRFTQDCLAVKQVQKSDTDPSLFEVKYLGNHTCNNITSPKT 171

[Close]

BLAST of CmoCh17G005420 vs. TAIR10
Match: AT4G23810.1 (AT4G23810.1 WRKY family transcription factor)

HSP 1 Score: 131.3 bits (329), Expect = 9.2e-31
Identity = 83/199 (41.71%), Postives = 115/199 (57.79%), Query Frame = 1


Query: 67  SKKRKVMPKWSERVKVASASASAVEGPLHDGFSWRKYGQKDILGSKFPRGYFRCSHRFTL 126
           SKKRK++PKWSE+V+++      +EGP  D FSWRKYGQKDILG+KFPR Y+RC+HR T 
Sbjct: 132 SKKRKMLPKWSEKVRISPERG--LEGPQDDVFSWRKYGQKDILGAKFPRSYYRCTHRSTQ 191

Query: 127 GCKATKQVQKSDTDPTIYEVTYKGTHTCNR------PLHSKTQQQQHHQKPSLQHPMPPK 186
            C ATKQVQ+SD D T++EVTY+GTHTC++      PL S  ++Q    KP++       
Sbjct: 192 NCWATKQVQRSDGDATVFEVTYRGTHTCSQAITRTPPLASPEKRQDTRVKPAI------- 251

Query: 187 QEQRPDDDEPSCQSFSPEVAAIHVKSEMFDDIDIDNGFCRPLRPPSLLF---ESEVQDDD 246
             Q+P D   S +S       + V+++  D  D  + F  P  PP   +     E    +
Sbjct: 252 -TQKPKDILESLKS------NLTVRTDGLD--DGKDVFSFPDTPPFYNYGTINGEFGHVE 311

Query: 247 QSP-FRESEWFGLCCDFET 256
            SP F   +WF    + +T
Sbjct: 312 SSPIFDVVDWFNPTVEIDT 312

[Close]

BLAST of CmoCh17G005420 vs. TAIR10
Match: AT4G11070.1 (AT4G11070.1 WRKY family transcription factor)

HSP 1 Score: 125.2 bits (313), Expect = 6.6e-29
Identity = 86/212 (40.57%), Postives = 118/212 (55.66%), Query Frame = 1


Query: 2   ELTPLIQELNQGKHLANQLR--THLHLSSSSHAV------HLIHQILRSYDNALLSL--- 61
           E   L+ EL  G   A QL+  +   LS+SS  +      +L+H I+ S+  A+L L   
Sbjct: 7   ERRSLLNELIHGLKAAKQLQGSSSPSLSASSSYLTTEIKENLLHNIVSSFKKAILMLNGS 66

Query: 62  --------ESTPVPTNAP---------------------VKNRDV---SKKRKVMPKWSE 121
                   E  P P   P                     V++++    SKKRK++PKW+E
Sbjct: 67  TTQHNPTIELAPDPLAHPGKVPGSPASITGNPRSEEFFNVRSKEFNLSSKKRKMLPKWTE 126

Query: 122 RVKVASASASAVEGPLHDGFSWRKYGQKDILGSKFPRGYFRCSHRFTLGCKATKQVQKSD 169
           +V+++      +EGP  D FSWRKYGQKDILG+KFPR Y+RC+ R T  C ATKQVQ+SD
Sbjct: 127 QVRISPERG--LEGPHDDIFSWRKYGQKDILGAKFPRSYYRCTFRNTQYCWATKQVQRSD 186

[Close]

BLAST of CmoCh17G005420 vs. TAIR10
Match: AT5G24110.1 (AT5G24110.1 WRKY DNA-binding protein 30)

HSP 1 Score: 113.6 bits (283), Expect = 2.0e-25
Identity = 63/173 (36.42%), Postives = 102/173 (58.96%), Query Frame = 1


Query: 12  QGKHLANQLRTHLHLSSSSHAVHLIHQILRSYDNALLSLE------------STPVPTNA 71
           +G+  A+Q  +    SS     HL  +IL+SY  +L  +              +P   ++
Sbjct: 23  EGRDYAHQFGS---ASSQETREHLAKKILQSYHKSLTIMNYSGELDQVSQGGGSPKSDDS 82

Query: 72  PVKNRDVSKKRKVMPKWSERVKVASASASAVEGPLHDGFSWRKYGQKDILGSKFPRGYFR 131
             +   +   +K MP+WS +V++A  +   V+  L DGFSWRKYGQKDILG+KFPRGY+R
Sbjct: 83  DQEPLVIKSSKKSMPRWSSKVRIAPGAG--VDRTLDDGFSWRKYGQKDILGAKFPRGYYR 142

Query: 132 CSHRFTLGCKATKQVQKSDTDPTIYEVTYKGTHTCNRPLHSKTQQQQHHQKPS 173
           C++R + GC+ATKQVQ+SD +  + E++Y+G H+C++  +  T     + +P+
Sbjct: 143 CTYRKSQGCEATKQVQRSDENQMLLEISYRGIHSCSQAANVGTTMPIQNLEPN 190

[Close]

BLAST of CmoCh17G005420 vs. TAIR10
Match: AT3G56400.1 (AT3G56400.1 WRKY DNA-binding protein 70)

HSP 1 Score: 99.0 bits (245), Expect = 5.1e-21
Identity = 59/135 (43.70%), Postives = 77/135 (57.04%), Query Frame = 1


Query: 60  PVKNRDVSKKRKVMPKWSERVKVASASASAVEGPLHDGFSWRKYGQKDILGSKFPRGYFR 119
           PVK +    KRK   K SE   + S         L D FSWRKYGQK+IL +KFPR YFR
Sbjct: 95  PVKGKRGCYKRK---KRSETCTIESTI-------LEDAFSWRKYGQKEILNAKFPRSYFR 154

Query: 120 CSHRFTLGCKATKQVQKSDTDPTIYEVTYKGTHTCNRPLHS-KTQQQQHHQK---PSLQH 179
           C+H++T GCKATKQVQK + +P ++ +TY G HTCN    + K++   HH +    S  H
Sbjct: 155 CTHKYTQGCKATKQVQKVELEPKMFSITYIGNHTCNTNAETPKSKTCDHHDEIFMDSEDH 214

Query: 180 PMPPKQEQRPDDDEP 191
             P       ++D P
Sbjct: 215 KSPSLSTSMKEEDNP 219

[Close]

BLAST of CmoCh17G005420 vs. NCBI nr
Match: gi|659124087|ref|XP_008461982.1| (PREDICTED: probable WRKY transcription factor 53 [Cucumis melo])

HSP 1 Score: 345.9 bits (886), Expect = 6.8e-92
Identity = 196/305 (64.26%), Postives = 222/305 (72.79%), Query Frame = 1


Query: 1   MELTPLIQELNQGKHLANQLRTHLHLSSSSHAVHLIHQILRSYDNALLSLE--------S 60
           ME   LIQELNQGK LANQLR HLH SSSSH + L+ +ILRSY+NALL+L         S
Sbjct: 1   MEFLSLIQELNQGKQLANQLRNHLHPSSSSHGILLVDKILRSYENALLALSAGGGASVNS 60

Query: 61  TPVPTNAPVKNRDVSKKRKVMPKWSERVKVASASASAVEGPLHDGFSWRKYGQKDILGSK 120
              P NA VK+ DVSKKRK+M KWSE+VKV+S SA  VEGP  DGFSWRKYGQKDILGS+
Sbjct: 61  AIAPVNAAVKDGDVSKKRKLMAKWSEQVKVSSGSA--VEGPCCDGFSWRKYGQKDILGSQ 120

Query: 121 FPRGYFRCSHRFTLGCKATKQVQKSDTDPTIYEVTYKGTHTCNRPLHSKTQQQQHHQKPS 180
           FPRGYFRCSHRFT GC ATKQVQKSD DPTIY+VTY+G HTCN+ LHS T   Q HQ   
Sbjct: 121 FPRGYFRCSHRFTQGCLATKQVQKSDNDPTIYDVTYRGRHTCNKALHS-TNTPQEHQNSL 180

Query: 181 LQHPMPPKQEQRPDDD--EPSCQSFSPEVAAIHVKSEMFDDIDIDNGFCRPLRPPSLLFE 240
           LQHP+PPKQE++P     +P C  FS +   I VKSE  D  + + G  +P  PPS +F 
Sbjct: 181 LQHPIPPKQEEKPLQQLHDPLCFMFSSD--PIRVKSENLD--NANGGLLQPFCPPSPMFG 240

Query: 241 SEVQDDDQSPFRESE---------WFGLCCDFETGVVSIPNSVTNNICIEELEEYCSFDN 287
           SEVQ DDQSPFRESE          FGLCCDFETG VSIP+S+T NI I +LEEYCSFDN
Sbjct: 241 SEVQ-DDQSPFRESECSLTFESNDTFGLCCDFETGFVSIPSSMT-NISIGDLEEYCSFDN 296

[Close]

BLAST of CmoCh17G005420 vs. NCBI nr
Match: gi|525507306|ref|NP_001267693.1| (probable WRKY transcription factor 46-like [Cucumis sativus])

HSP 1 Score: 330.5 bits (846), Expect = 2.9e-87
Identity = 198/306 (64.71%), Postives = 219/306 (71.57%), Query Frame = 1


Query: 1   MELTPLIQELNQGKHLANQLRTHLHLSSSSHAVHLIHQILRSYDNALLSLE--------S 60
           ME   LIQELNQGK LANQLRTHLH SSSSH + LI +ILRSY+NALL+L         S
Sbjct: 1   MEFLSLIQELNQGKQLANQLRTHLHPSSSSHGILLIDKILRSYENALLALSGGAAASVNS 60

Query: 61  TPVPTNAPVKNRDVSKKRKVMPKWSERVKVASASASAVEGPLHDGFSWRKYGQKDILGSK 120
              P NA V++ DVSKKRKVM KWSE+VKV+SASA  VEGP  DGFSWRKYGQKDILGSK
Sbjct: 61  AIAPVNAAVQDGDVSKKRKVMAKWSEQVKVSSASA--VEGPGCDGFSWRKYGQKDILGSK 120

Query: 121 FPRGYFRCSHRFTLGCKATKQVQKSDTDPTIYEVTYKGTHTCNRPLHSKTQQQQHHQKPS 180
           FPR YFRCSHRFT GC ATKQVQKSD DPTIYEVTYKG HTCN+ LHS T   Q HQ   
Sbjct: 121 FPRSYFRCSHRFTQGCLATKQVQKSDNDPTIYEVTYKGRHTCNKALHS-TNTPQEHQNTF 180

Query: 181 LQHPMPPKQEQRPDDD--EPSCQSFSPEVAAIHVKSEMFDDIDIDN-GFCRPLRPPSLLF 240
           LQHP+PPKQE +P     +P C  FS +   I VKSE   D++  N G  +PLR PS +F
Sbjct: 181 LQHPIPPKQEDKPLQQLHDPLCFMFSSD--PIRVKSE---DLEYANGGLFQPLRTPSPMF 240

Query: 241 ESEVQDDDQSPFRESE---------WFGLCCDFETGVVSIPNSVTNNICIEELEEYCSFD 287
            SEVQ DD SPFRESE          FGL CDFET  VSIP+S+T NI I +LEE  SFD
Sbjct: 241 GSEVQ-DDLSPFRESECSPTFESNDMFGLWCDFETEFVSIPSSMT-NISIGDLEECFSFD 296

[Close]

BLAST of CmoCh17G005420 vs. NCBI nr
Match: gi|823187147|ref|XP_012490093.1| (PREDICTED: probable WRKY transcription factor 46 [Gossypium raimondii])

HSP 1 Score: 165.6 bits (418), Expect = 1.3e-37
Identity = 126/340 (37.06%), Postives = 174/340 (51.18%), Query Frame = 1


Query: 1   MELTPLIQELNQGKHLANQLRTHLHLSSSSHA-VHLIHQILRSYDNALL----------- 60
           ME   L+ EL +G+ + N L  HLHL SS    + LI +IL SY+NAL            
Sbjct: 1   MEQGALLNELKEGREVTNLLMKHLHLPSSYQTRLVLIEKILGSYENALSILNCNGLVVET 60

Query: 61  -----SLESTPVPTNAPVKNRDVSKKRKVMPKWSERVKVASASASAVEGPLHDGFSWRKY 120
                ++ES P   ++    RDV KKRK    W+E+++V S ++  ++ P+ DGF WRKY
Sbjct: 61  RPSLSTMESLPSIDHSSPDKRDVFKKRKTSSGWTEQLRVCSGTS--LDNPVDDGFCWRKY 120

Query: 121 GQKDILGSKFPRGYFRCSHRFTLGCKATKQVQKSDTDPTIYEVTYKGTHTCNRPLH---- 180
           GQK ILGS FPRGY+RC+HR + GC A KQVQKS+ DPTI+EV YKG HTCN+  H    
Sbjct: 121 GQKAILGSNFPRGYYRCTHRHSQGCLAIKQVQKSNDDPTIFEVKYKGRHTCNQTSHFAAT 180

Query: 181 ----SKTQQQQHHQKPSLQHPMPPKQEQRPDDDEPSCQSFSPEVAAIHVKSEMFDD-IDI 240
               S   + + +  P  QH +  KQ+Q       + Q+FS   + I VK+E  D+  DI
Sbjct: 181 YVSVSTESENEGNYSPKRQHQLEVKQKQ-------AQQAFSSFGSGIKVKTEDLDNREDI 240

Query: 241 DNGFCRPLRPPSL--------LFESEVQDDDQSPF-----RESEWFGLC-C---DFE--- 286
              F  P+    +        L E+E+  +    F      ES +F +  C    FE   
Sbjct: 241 FPSFPFPVESEQVKNGSFVEALMENEIMGNLSPAFISPATSESNYFSMSPCHMGSFESDL 300

[Close]

BLAST of CmoCh17G005420 vs. NCBI nr
Match: gi|703096248|ref|XP_010095789.1| (putative WRKY transcription factor 46 [Morus notabilis])

HSP 1 Score: 164.5 bits (415), Expect = 2.8e-37
Identity = 111/307 (36.16%), Postives = 160/307 (52.12%), Query Frame = 1


Query: 1   MELTPLIQELNQGKHLANQLRTHLH-LSSSSHAVHLIHQILRSYDNALLSLESTPVPTNA 60
           +E   LI EL QGK LA QL  HL   SS      L+ +IL SY+ AL  L+++    + 
Sbjct: 7   LEQKTLINELIQGKELAKQLMNHLQPFSSPEKRNFLVGKILSSYEKALSMLKTSGTDQSK 66

Query: 61  PV---------------------KNRDVSKKRKVMPKWSERVKVASASASAVEGPLHDGF 120
           P                      K+RDV KKRKV+P+W+E+VKV   +    EGPL DG+
Sbjct: 67  PFESPHSLDNTSPRSVIFDQDYSKHRDVFKKRKVLPRWTEQVKVCMGTGP--EGPLEDGY 126

Query: 121 SWRKYGQKDILGSKFPRGYFRCSHRFTLGCKATKQVQKSDTDPTIYEVTYKGTHTCNR-- 180
           SWRKYGQKDILG+  PRGY+RC+ R   GC ATKQVQ+SD D +++EVTY+G HTC+R  
Sbjct: 127 SWRKYGQKDILGANHPRGYYRCTRRNAQGCLATKQVQRSDQDSSLFEVTYRGRHTCSRAP 186

Query: 181 --PLHSKTQQQQHHQKPSLQHPMPPKQEQRPDDDEPSCQSFSPEVAAIHVKSEMFDDIDI 240
              + S     +H  K       P  +EQ  ++++P      P+   + VK+E FD  +I
Sbjct: 187 QLAMASANSLPKHGLKAENNDQFPTHEEQDQEEEKPK----QPQATGLGVKTEDFDTNNI 246

Query: 241 DNGFCRPLRPPSLLFESEVQDDD--QSPFRESEWFGLCCDFETGVVSIPNSVTNNICIEE 280
           ++G  R +  P     + ++ D+  +  F +    G+   F    VS   S + ++ +  
Sbjct: 247 EDG--RGIFQPFSFLSTPIESDNVGRDFFSDIVENGIAGPFSPPFVSPAGSESTSLSVSP 305

[Close]

BLAST of CmoCh17G005420 vs. NCBI nr
Match: gi|727880117|gb|AIY62479.1| (WRKY90 [Gossypium aridum])

HSP 1 Score: 162.9 bits (411), Expect = 8.1e-37
Identity = 123/340 (36.18%), Postives = 174/340 (51.18%), Query Frame = 1


Query: 1   MELTPLIQELNQGKHLANQLRTHLHLSSSSHA-VHLIHQILRSYDNALL----------- 60
           ME   L+ EL +G+ + N L  HLHL SS    + LI +IL SY+N+L            
Sbjct: 1   MEQEALLNELKEGREVTNLLMKHLHLPSSHQTRLVLIEKILGSYENSLSILNCNGLVVET 60

Query: 61  -----SLESTPVPTNAPVKNRDVSKKRKVMPKWSERVKVASASASAVEGPLHDGFSWRKY 120
                ++ES P   ++    RDV KKRK    W+E+++  + S ++++ P+ DGF WRKY
Sbjct: 61  KPSLSTMESLPSIDHSSPDKRDVFKKRKTSSGWTEQLR--ACSGTSLDNPVDDGFCWRKY 120

Query: 121 GQKDILGSKFPRGYFRCSHRFTLGCKATKQVQKSDTDPTIYEVTYKGTHTCNRPLH---- 180
           GQK ILGS FPRGY+RC+HR + GC A KQVQKS+ DPTI+EV YKG HTCN+  H    
Sbjct: 121 GQKAILGSNFPRGYYRCTHRHSQGCLAIKQVQKSNDDPTIFEVKYKGRHTCNQTSHFAAT 180

Query: 181 ----SKTQQQQHHQKPSLQHPMPPKQEQRPDDDEPSCQSFSPEVAAIHVKSEMFDD-IDI 240
               S   + + +  P  QH +  KQ+Q       + Q+FS   + I VK+E  D+  DI
Sbjct: 181 YVSVSTESENEGNYSPKRQHQLEVKQKQ-------AQQAFSSFGSGIKVKTEDLDNREDI 240

Query: 241 DNGFCRPLRPPSL--------LFESEVQDDDQSPF-----RESEWFGLC-C---DFE--- 286
              F  P+    +        L E+++  +    F      ES +F +  C    FE   
Sbjct: 241 FPSFPFPVESEQVKNGSFVEALMENDIMGNLSPAFMSPATSESNYFSMSPCHMGSFESDL 300

The following BLAST results are available for this feature:

BLAST of CmoCh17G005420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WRK46_ARATH	5.6e-30	48.24	Probable WRKY transcription factor 46 OS=Arabidopsis thaliana GN=WRKY46 PE=2 SV=...	[more]
WRK53_ARATH	1.6e-29	41.71	Probable WRKY transcription factor 53 OS=Arabidopsis thaliana GN=WRKY53 PE=1 SV=...	[more]
WRK41_ARATH	1.2e-27	40.57	Probable WRKY transcription factor 41 OS=Arabidopsis thaliana GN=WRKY41 PE=2 SV=...	[more]
WRK30_ARATH	3.5e-24	36.42	Probable WRKY transcription factor 30 OS=Arabidopsis thaliana GN=WRKY30 PE=2 SV=...	[more]
WRK70_ARATH	9.0e-20	43.70	Probable WRKY transcription factor 70 OS=Arabidopsis thaliana GN=WRKY70 PE=2 SV=...	[more]

BLAST of CmoCh17G005420 vs. TrEMBL


Match Name	E-value	Identity	Description
E7CEY4_CUCSA	2.0e-87	64.71	Uncharacterized protein OS=Cucumis sativus GN=WRKY50 PE=2 SV=1	[more]
A0A0D2TD13_GOSRA	8.7e-38	37.06	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G107300 PE=4 SV=1	[more]
W9RNA2_9ROSA	1.9e-37	36.16	Putative WRKY transcription factor 46 OS=Morus notabilis GN=L484_017596 PE=4 SV=...	[more]
A0A0A7E9T7_GOSAI	5.7e-37	36.18	WRKY90 OS=Gossypium aridum PE=2 SV=1	[more]
A0A068LD57_GOSHI	7.4e-37	36.55	WRKY transcription factor 50 OS=Gossypium hirsutum GN=WRKY50 PE=2 SV=1	[more]

BLAST of CmoCh17G005420 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46400.1	3.2e-31	48.24	WRKY DNA-binding protein 46	[more]
AT4G23810.1	9.2e-31	41.71	WRKY family transcription factor	[more]
AT4G11070.1	6.6e-29	40.57	WRKY family transcription factor	[more]
AT5G24110.1	2.0e-25	36.42	WRKY DNA-binding protein 30	[more]
AT3G56400.1	5.1e-21	43.70	WRKY DNA-binding protein 70	[more]

BLAST of CmoCh17G005420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659124087\|ref\|XP_008461982.1\|	6.8e-92	64.26	PREDICTED: probable WRKY transcription factor 53 [Cucumis melo]	[more]
gi\|525507306\|ref\|NP_001267693.1\|	2.9e-87	64.71	probable WRKY transcription factor 46-like [Cucumis sativus]	[more]
gi\|823187147\|ref\|XP_012490093.1\|	1.3e-37	37.06	PREDICTED: probable WRKY transcription factor 46 [Gossypium raimondii]	[more]
gi\|703096248\|ref\|XP_010095789.1\|	2.8e-37	36.16	putative WRKY transcription factor 46 [Morus notabilis]	[more]
gi\|727880117\|gb\|AIY62479.1\|	8.1e-37	36.18	WRKY90 [Gossypium aridum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003657	WRKY_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G005420.1	CmoCh17G005420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	GENE3D	G3DSA:2.20.25.80		coord: 86..157 score: 4.3
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 96..154 score: 1.7
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 94..156 score: 3.7
IPR003657	WRKY domain	PROFILE	PS50811	WRKY	coord: 89..157 score: 22
IPR003657	WRKY domain	unknown	SSF118290	WRKY DNA-binding domain	coord: 93..157 score: 4.18
None	No IPR available	PANTHER	PTHR32096	FAMILY NOT NAMED	coord: 1..245 score: 1.9
None	No IPR available	PANTHER	PTHR32096:SF20	SUBFAMILY NOT NAMED	coord: 1..245 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G005420	Cucsa.078810	Cucumber (Gy14) v1	cgycmoB0133
CmoCh17G005420	CmaCh17G005620	Cucurbita maxima (Rimu)	cmacmoB353
CmoCh17G005420	CmaCh08G001180	Cucurbita maxima (Rimu)	cmacmoB895
CmoCh17G005420	Cla015003	Watermelon (97103) v1	cmowmB323
CmoCh17G005420	Csa7G328830	Cucumber (Chinese Long) v2	cmocuB379
CmoCh17G005420	ClCG09G009480	Watermelon (Charleston Gray)	cmowcgB300
CmoCh17G005420	CSPI07G13560	Wild cucumber (PI 183967)	cmocpiB382
CmoCh17G005420	Lsi02G020350	Bottle gourd (USVL1VR-Ls)	cmolsiB338
CmoCh17G005420	Cp4.1LG12g04760	Cucurbita pepo (Zucchini)	cmocpeB335
CmoCh17G005420	Cp4.1LG17g10220	Cucurbita pepo (Zucchini)	cmocpeB349
CmoCh17G005420	CsaV3_7G025370	Cucumber (Chinese Long) v3	cmocucB0456
CmoCh17G005420	Cla97C09G172330	Watermelon (97103) v2	cmowmbB371
CmoCh17G005420	Bhi09G001196	Wax gourd	cmowgoB0490
CmoCh17G005420	CsGy7G012410	Cucumber (Gy14) v2	cgybcmoB911
CmoCh17G005420	Carg04945	Silver-seed gourd	carcmoB0117
CmoCh17G005420	Carg26122	Silver-seed gourd	carcmoB1295

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh17G005420	CmoCh08G001250	Cucurbita moschata (Rifu)	cmocmoB318

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G005420	Silver-seed gourd	carcmoB0116
CmoCh17G005420	Watermelon (97103) v2	cmowmbB368
CmoCh17G005420	Cucurbita moschata (Rifu)	cmocmoB323
CmoCh17G005420	Cucurbita maxima (Rimu)	cmacmoB900
CmoCh17G005420	Watermelon (97103) v1	cmowmB346
CmoCh17G005420	Cucurbita pepo (Zucchini)	cmocpeB354