CmaCh17G005620 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G005620
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	WRKY transcription factor 6
Location	Cma_Chr17 : 4553753 .. 4555295 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTCAATATAAAGTTGGACCCTTTCCAATCCCCAAACACAATTCAATTCAATTCAATTTATTACAAACTCTTTTCCTTGTCCTTTCCTCCCAATTTCTTCAATCCCCATCATCAAGTTTCAGTTTCTCCCCTTCCTTTATAATAAAATCCCCCCTTCCCTTCCCTTCTCCCACCTCCATTTCATTGATTTCGAGGTTCCACCATGGAACTTATGGCTCTAATCCAAGAGCTCAGCCAAGGCAAACACCTCGCTAACCAACTCCGAACCCATCTCCATCCTTCTTCTTCCTCCCATGCCATTCTCCTCATCGATCAGATTCTTCGTTCCTACGACAACGCCCTTTTCTCTCTCGCCCTCCCTGTTCCGACCAATGCGCCTGTGAAGGACAGACACATCGCCAGGAAGAGGTAATTCCTGTGTTTCCCACTGCTCGTCGTCGTCGTTGTTGTTGTTGTTGGTTCCAAAATCTTATTGGGTTTTGCAGAAAGGTAATGCCCAAATGGAGTGAGCAGGTTAAGGTTGCTTCTGCCTCTGCCGTGGAAGGCCCTCTTCATGATGGGTTTAGCTGGAGAAAGTATGGGCAGAAGGACATTCTTGGATCCAAATTCCCCAGGTTCTTACCTCCTAAACTTCTAATCTTCTTCTTTGCTTCGTTTGGTGCCTGTTTGGAAAATTGACATTTTGTTGTGTATTGGTTATTATGCAGAGGCTATTTTAGATGCTCACATCGCTTTACCTTGGGATGTAAAGCAACAAAACAAGTTCAAAAATCAGACAATGATCCAACAATTTACGAGGTGACCTACAAAGGAACACACACTTGCAACAGACCTCTCCATTCAAACACACAACAACAAGGCCAAAAGCCTTCATTGCAACACCCAATGCCACCAAAACAAGAACAAAGGCCAGATGATGATGAGCCTTCATGCCAATCCTTCAGCCCAGAAGTAGCAGCCATTCATGTCAAATCCGAGACGTTCGACGATATCGATATCGACAATGGTCTCTTTCGTCCTTTATGTCCTCCATCATCGTTGTTTGAATCTGAAGTTCAAGATGATGATCAAAGCCCCTTTAGAGAAAGTGAGTTGTTTGGATTGTGTTGTGATTTTGAAACCGGGGTCGTGTCGATTCCGAATTCAGTGACTAATATTTGCATTGAAGAGTTGGAGGAGTATTGTAGTTTTGATAATCTGGAGTTTTGTTGAAATTGTGTTGTTTTCTCACCTCCCAAACAAACAAGAGGGAAAGAAAAGATTGTGAATTAGTAGTCCGTAGGAGAAAATAGGAATATTGTAAGTTTCTTAGCACTTGTGAATTTCAATAAAGTTTAGAAGAAGAGGAATGGATTTTCTTGCTCTTATTACCGCCCAAACAAAGCCTAAAACCTTTGATGAGGCAGTTGGCGACCCATTGCGGCAGCAGGCTATGAATGCTGAAATTGCAGCTTTGGAAAATAATCATATTTGGTCTCTCCTTTCTCTACAACCTGGCCATAAAGTTATTGGCTGTCGTTGGATATACAAGATTAAATACAAC

mRNA sequence

AGTCAATATAAAGTTGGACCCTTTCCAATCCCCAAACACAATTCAATTCAATTCAATTTATTACAAACTCTTTTCCTTGTCCTTTCCTCCCAATTTCTTCAATCCCCATCATCAAGTTTCAGTTTCTCCCCTTCCTTTATAATAAAATCCCCCCTTCCCTTCCCTTCTCCCACCTCCATTTCATTGATTTCGAGGTTCCACCATGGAACTTATGGCTCTAATCCAAGAGCTCAGCCAAGGCAAACACCTCGCTAACCAACTCCGAACCCATCTCCATCCTTCTTCTTCCTCCCATGCCATTCTCCTCATCGATCAGATTCTTCGTTCCTACGACAACGCCCTTTTCTCTCTCGCCCTCCCTGTTCCGACCAATGCGCCTGTGAAGGACAGACACATCGCCAGGAAGAGAAAGGTAATGCCCAAATGGAGTGAGCAGGTTAAGGTTGCTTCTGCCTCTGCCGTGGAAGGCCCTCTTCATGATGGGTTTAGCTGGAGAAAGTATGGGCAGAAGGACATTCTTGGATCCAAATTCCCCAGAGGCTATTTTAGATGCTCACATCGCTTTACCTTGGGATGTAAAGCAACAAAACAAGTTCAAAAATCAGACAATGATCCAACAATTTACGAGGTGACCTACAAAGGAACACACACTTGCAACAGACCTCTCCATTCAAACACACAACAACAAGGCCAAAAGCCTTCATTGCAACACCCAATGCCACCAAAACAAGAACAAAGGCCAGATGATGATGAGCCTTCATGCCAATCCTTCAGCCCAGAAGTAGCAGCCATTCATGTCAAATCCGAGACGTTCGACGATATCGATATCGACAATGGTCTCTTTCGTCCTTTATGTCCTCCATCATCGTTGTTTGAATCTGAAGTTCAAGATGATGATCAAAGCCCCTTTAGAGAAAGTGAGTTGTTTGGATTGTGTTGTGATTTTGAAACCGGGGTCGTGTCGATTCCGAATTCAGTGACTAATATTTGCATTGAAGAGTTGGAGGAGTATTGTAGTTTTGATAATCTGGAGTTTTGTTGAAATTGTGTTGTTTTCTCACCTCCCAAACAAACAAGAGGGAAAGAAAAGATTGTGAATTAGTAGTCCGTAGGAGAAAATAGGAATATTGTAAGTTTCTTAGCACTTGTGAATTTCAATAAAGTTTAGAAGAAGAGGAATGGATTTTCTTGCTCTTATTACCGCCCAAACAAAGCCTAAAACCTTTGATGAGGCAGTTGGCGACCCATTGCGGCAGCAGGCTATGAATGCTGAAATTGCAGCTTTGGAAAATAATCATATTTGGTCTCTCCTTTCTCTACAACCTGGCCATAAAGTTATTGGCTGTCGTTGGATATACAAGATTAAATACAAC

Coding sequence (CDS)

ATGGAACTTATGGCTCTAATCCAAGAGCTCAGCCAAGGCAAACACCTCGCTAACCAACTCCGAACCCATCTCCATCCTTCTTCTTCCTCCCATGCCATTCTCCTCATCGATCAGATTCTTCGTTCCTACGACAACGCCCTTTTCTCTCTCGCCCTCCCTGTTCCGACCAATGCGCCTGTGAAGGACAGACACATCGCCAGGAAGAGAAAGGTAATGCCCAAATGGAGTGAGCAGGTTAAGGTTGCTTCTGCCTCTGCCGTGGAAGGCCCTCTTCATGATGGGTTTAGCTGGAGAAAGTATGGGCAGAAGGACATTCTTGGATCCAAATTCCCCAGAGGCTATTTTAGATGCTCACATCGCTTTACCTTGGGATGTAAAGCAACAAAACAAGTTCAAAAATCAGACAATGATCCAACAATTTACGAGGTGACCTACAAAGGAACACACACTTGCAACAGACCTCTCCATTCAAACACACAACAACAAGGCCAAAAGCCTTCATTGCAACACCCAATGCCACCAAAACAAGAACAAAGGCCAGATGATGATGAGCCTTCATGCCAATCCTTCAGCCCAGAAGTAGCAGCCATTCATGTCAAATCCGAGACGTTCGACGATATCGATATCGACAATGGTCTCTTTCGTCCTTTATGTCCTCCATCATCGTTGTTTGAATCTGAAGTTCAAGATGATGATCAAAGCCCCTTTAGAGAAAGTGAGTTGTTTGGATTGTGTTGTGATTTTGAAACCGGGGTCGTGTCGATTCCGAATTCAGTGACTAATATTTGCATTGAAGAGTTGGAGGAGTATTGTAGTTTTGATAATCTGGAGTTTTGTTGA

Protein sequence

MELMALIQELSQGKHLANQLRTHLHPSSSSHAILLIDQILRSYDNALFSLALPVPTNAPVKDRHIARKRKVMPKWSEQVKVASASAVEGPLHDGFSWRKYGQKDILGSKFPRGYFRCSHRFTLGCKATKQVQKSDNDPTIYEVTYKGTHTCNRPLHSNTQQQGQKPSLQHPMPPKQEQRPDDDEPSCQSFSPEVAAIHVKSETFDDIDIDNGLFRPLCPPSSLFESEVQDDDQSPFRESELFGLCCDFETGVVSIPNSVTNICIEELEEYCSFDNLEFC

Homology

[Close]

BLAST of CmaCh17G005620 vs. Swiss-Prot
Match: WRK46_ARATH (Probable WRKY transcription factor 46 OS=Arabidopsis thaliana GN=WRKY46 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.8e-31
Identity = 79/162 (48.77%), Postives = 99/162 (61.11%), Query Frame = 1


Query: 1   MELMALIQELSQGKHLANQLRTHL-HPSSSSHAILLIDQILRSYDNALFSLALPVPTNAP 60
           ME   +I EL  GK LAN+L  +L H SS      LI  ILR Y NA+F L+     N  
Sbjct: 3   MEEKLVINELELGKELANRLMNNLKHTSSVDSNKTLISDILRIYQNAIFMLSFNQDKNIL 62

Query: 61  VKD--------RHIARKRKVMPKWSEQVKVASASAVE-GPLHDGFSWRKYGQKDILGSKF 120
            +         +++ +KRKV  K +E+VKV  A+  E G + DG  WRKYGQK+I GSK 
Sbjct: 63  KRSLEIDGKDSKNVFKKRKVSEKNTEKVKVFVATEQENGSIDDGHCWRKYGQKEIHGSKN 122

Query: 121 PRGYFRCSHRFTLGCKATKQVQKSDNDPTIYEVTYKGTHTCN 153
           PR Y+RC+HRFT  C A KQVQKSD DP+++EV Y G HTCN
Sbjct: 123 PRAYYRCTHRFTQDCLAVKQVQKSDTDPSLFEVKYLGNHTCN 164

[Close]

BLAST of CmaCh17G005620 vs. Swiss-Prot
Match: WRK41_ARATH (Probable WRKY transcription factor 41 OS=Arabidopsis thaliana GN=WRKY41 PE=2 SV=2)

HSP 1 Score: 132.9 bits (333), Expect = 5.5e-30
Identity = 62/115 (53.91%), Postives = 83/115 (72.17%), Query Frame = 1


Query: 66  ARKRKVMPKWSEQVKVASASAVEGPLHDGFSWRKYGQKDILGSKFPRGYFRCSHRFTLGC 125
           ++KRK++PKW+EQV+++    +EGP  D FSWRKYGQKDILG+KFPR Y+RC+ R T  C
Sbjct: 115 SKKRKMLPKWTEQVRISPERGLEGPHDDIFSWRKYGQKDILGAKFPRSYYRCTFRNTQYC 174

Query: 126 KATKQVQKSDNDPTIYEVTYKGTHTCNRPLHSNTQQQGQKPSLQHPMPPKQEQRP 181
            ATKQVQ+SD DPTI+EVTY+GTHTC++ +               P+P K+E +P
Sbjct: 175 WATKQVQRSDGDPTIFEVTYRGTHTCSQGI---------------PLPEKRETKP 214

[Close]

BLAST of CmaCh17G005620 vs. Swiss-Prot
Match: WRK53_ARATH (Probable WRKY transcription factor 53 OS=Arabidopsis thaliana GN=WRKY53 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.6e-29
Identity = 62/124 (50.00%), Postives = 85/124 (68.55%), Query Frame = 1


Query: 66  ARKRKVMPKWSEQVKVASASAVEGPLHDGFSWRKYGQKDILGSKFPRGYFRCSHRFTLGC 125
           ++KRK++PKWSE+V+++    +EGP  D FSWRKYGQKDILG+KFPR Y+RC+HR T  C
Sbjct: 132 SKKRKMLPKWSEKVRISPERGLEGPQDDVFSWRKYGQKDILGAKFPRSYYRCTHRSTQNC 191

Query: 126 KATKQVQKSDNDPTIYEVTYKGTHTCNRPLHSNTQQQGQKPSLQHPMPPKQEQRPDDDEP 185
            ATKQVQ+SD D T++EVTY+GTHTC++ +         +      + P   Q+P D   
Sbjct: 192 WATKQVQRSDGDATVFEVTYRGTHTCSQAITRTPPLASPEKRQDTRVKPAITQKPKDILE 251

Query: 186 SCQS 190
           S +S
Sbjct: 252 SLKS 255

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BLAST of CmaCh17G005620 vs. Swiss-Prot
Match: WRK30_ARATH (Probable WRKY transcription factor 30 OS=Arabidopsis thaliana GN=WRKY30 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.3e-26
Identity = 60/149 (40.27%), Postives = 88/149 (59.06%), Query Frame = 1


Query: 13  GKHLANQLRTHLHPS--SSSHAILLIDQILRSYDNALFSLALPVPTNAPVKDRHIARKRK 72
           G   + + R HL      S H  L I       D        P   ++  +   I   +K
Sbjct: 32  GSASSQETREHLAKKILQSYHKSLTIMNYSGELDQVSQGGGSPKSDDSDQEPLVIKSSKK 91

Query: 73  VMPKWSEQVKVASASAVEGPLHDGFSWRKYGQKDILGSKFPRGYFRCSHRFTLGCKATKQ 132
            MP+WS +V++A  + V+  L DGFSWRKYGQKDILG+KFPRGY+RC++R + GC+ATKQ
Sbjct: 92  SMPRWSSKVRIAPGAGVDRTLDDGFSWRKYGQKDILGAKFPRGYYRCTYRKSQGCEATKQ 151

Query: 133 VQKSDNDPTIYEVTYKGTHTCNRPLHSNT 160
           VQ+SD +  + E++Y+G H+C++  +  T
Sbjct: 152 VQRSDENQMLLEISYRGIHSCSQAANVGT 180

[Close]

BLAST of CmaCh17G005620 vs. Swiss-Prot
Match: WRK70_ARATH (Probable WRKY transcription factor 70 OS=Arabidopsis thaliana GN=WRKY70 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.1e-21
Identity = 51/94 (54.26%), Postives = 63/94 (67.02%), Query Frame = 1


Query: 59  PVKDRHIARKRKVMPKWSEQVKVASASAVEGPLHDGFSWRKYGQKDILGSKFPRGYFRCS 118
           PVK +    KRK   K SE   + S       L D FSWRKYGQK+IL +KFPR YFRC+
Sbjct: 95  PVKGKRGCYKRK---KRSETCTIESTI-----LEDAFSWRKYGQKEILNAKFPRSYFRCT 154

Query: 119 HRFTLGCKATKQVQKSDNDPTIYEVTYKGTHTCN 153
           H++T GCKATKQVQK + +P ++ +TY G HTCN
Sbjct: 155 HKYTQGCKATKQVQKVELEPKMFSITYIGNHTCN 180

[Close]

BLAST of CmaCh17G005620 vs. TrEMBL
Match: E7CEY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=WRKY50 PE=2 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 7.1e-93
Identity = 199/302 (65.89%), Postives = 225/302 (74.50%), Query Frame = 1


Query: 1   MELMALIQELSQGKHLANQLRTHLHPSSSSHAILLIDQILRSYDNALFSLA--------- 60
           ME ++LIQEL+QGK LANQLRTHLHPSSSSH ILLID+ILRSY+NAL +L+         
Sbjct: 1   MEFLSLIQELNQGKQLANQLRTHLHPSSSSHGILLIDKILRSYENALLALSGGAAASVNS 60

Query: 61  LPVPTNAPVKDRHIARKRKVMPKWSEQVKVASASAVEGPLHDGFSWRKYGQKDILGSKFP 120
              P NA V+D  +++KRKVM KWSEQVKV+SASAVEGP  DGFSWRKYGQKDILGSKFP
Sbjct: 61  AIAPVNAAVQDGDVSKKRKVMAKWSEQVKVSSASAVEGPGCDGFSWRKYGQKDILGSKFP 120

Query: 121 RGYFRCSHRFTLGCKATKQVQKSDNDPTIYEVTYKGTHTCNRPLHS-NTQQQGQKPSLQH 180
           R YFRCSHRFT GC ATKQVQKSDNDPTIYEVTYKG HTCN+ LHS NT Q+ Q   LQH
Sbjct: 121 RSYFRCSHRFTQGCLATKQVQKSDNDPTIYEVTYKGRHTCNKALHSTNTPQEHQNTFLQH 180

Query: 181 PMPPKQEQRPDDD--EPSCQSFSPEVAAIHVKSETFDDIDIDN-GLFRPLCPPSSLFESE 240
           P+PPKQE +P     +P C  FS +   I VKSE   D++  N GLF+PL  PS +F SE
Sbjct: 181 PIPPKQEDKPLQQLHDPLCFMFSSD--PIRVKSE---DLEYANGGLFQPLRTPSPMFGSE 240

Query: 241 VQDDDQSPFRESE---------LFGLCCDFETGVVSIPNSVTNICIEELEEYCSFDNLE- 280
           VQ DD SPFRESE         +FGL CDFET  VSIP+S+TNI I +LEE  SFDNLE 
Sbjct: 241 VQ-DDLSPFRESECSPTFESNDMFGLWCDFETEFVSIPSSMTNISIGDLEECFSFDNLEM 296

[Close]

BLAST of CmaCh17G005620 vs. TrEMBL
Match: A0A0D2TD13_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G107300 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.7e-41
Identity = 125/332 (37.65%), Postives = 176/332 (53.01%), Query Frame = 1


Query: 1   MELMALIQELSQGKHLANQLRTHLH-PSSSSHAILLIDQILRSYDNALFSL--------- 60
           ME  AL+ EL +G+ + N L  HLH PSS    ++LI++IL SY+NAL  L         
Sbjct: 1   MEQGALLNELKEGREVTNLLMKHLHLPSSYQTRLVLIEKILGSYENALSILNCNGLVVET 60

Query: 61  --------ALPVPTNAPVKDRHIARKRKVMPKWSEQVKVASASAVEGPLHDGFSWRKYGQ 120
                   +LP   ++    R + +KRK    W+EQ++V S ++++ P+ DGF WRKYGQ
Sbjct: 61  RPSLSTMESLPSIDHSSPDKRDVFKKRKTSSGWTEQLRVCSGTSLDNPVDDGFCWRKYGQ 120

Query: 121 KDILGSKFPRGYFRCSHRFTLGCKATKQVQKSDNDPTIYEVTYKGTHTCNRPLH------ 180
           K ILGS FPRGY+RC+HR + GC A KQVQKS++DPTI+EV YKG HTCN+  H      
Sbjct: 121 KAILGSNFPRGYYRCTHRHSQGCLAIKQVQKSNDDPTIFEVKYKGRHTCNQTSHFAATYV 180

Query: 181 ---SNTQQQGQ-KPSLQHPMPPKQEQRPDDDEPSCQSFSPEVAAIHVKSETFDDID---- 240
              + ++ +G   P  QH +  KQ+Q       + Q+FS   + I VK+E  D+ +    
Sbjct: 181 SVSTESENEGNYSPKRQHQLEVKQKQ-------AQQAFSSFGSGIKVKTEDLDNREDIFP 240

Query: 241 ----------IDNGLFRPLCPPSSLFESEVQDDDQSPF-----RESELFGLC-C---DFE 279
                     + NG F       +L E+E+  +    F      ES  F +  C    FE
Sbjct: 241 SFPFPVESEQVKNGSF-----VEALMENEIMGNLSPAFISPATSESNYFSMSPCHMGSFE 300

[Close]

BLAST of CmaCh17G005620 vs. TrEMBL
Match: A0A068LD57_GOSHI (WRKY transcription factor 50 OS=Gossypium hirsutum GN=WRKY50 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.8e-40
Identity = 124/334 (37.13%), Postives = 175/334 (52.40%), Query Frame = 1


Query: 1   MELMALIQELSQGKHLANQLRTHLH---PSSSSHAILLIDQILRSYDNALFSL------- 60
           ME  AL+ EL +G+ + N L  HLH   PSS    ++LI++IL SY+NAL  L       
Sbjct: 1   MEQGALLNELKEGREVTNLLMKHLHLHLPSSHQTGLVLIEKILGSYENALSILNCNGLVV 60

Query: 61  ----------ALPVPTNAPVKDRHIARKRKVMPKWSEQVKVASASAVEGPLHDGFSWRKY 120
                     +LP   ++    R + +KRK    W+EQ++V S + ++ P+ DGF WRKY
Sbjct: 61  ETKPSLSTMESLPSIDHSSPDKRDVFKKRKTSSGWTEQLRVRSGTPLDNPVDDGFCWRKY 120

Query: 121 GQKDILGSKFPRGYFRCSHRFTLGCKATKQVQKSDNDPTIYEVTYKGTHTCNRPLH---- 180
           GQK ILGS FPRGY+RC+HR + GC A KQVQKS++DPTI+EV YKG HTCN+  H    
Sbjct: 121 GQKAILGSNFPRGYYRCTHRHSQGCLAIKQVQKSNDDPTIFEVKYKGRHTCNQTSHFAAT 180

Query: 181 -----SNTQQQGQ-KPSLQHPMPPKQEQRPDDDEPSCQSFSPEVAAIHVKSETFDDID-- 240
                + ++ +G   P  QH +  KQ+Q       + Q+FS   + I VK+E  D+ +  
Sbjct: 181 YVSVSTESENEGNYSPKRQHQLEVKQKQ-------AQQAFSSFGSGIKVKTEDLDNREDI 240

Query: 241 ------------IDNGLFRPLCPPSSLFESEVQDDDQSPF-----RESELFGLC-C---D 279
                       + NG F       +L E+++  +    F      ES  F +  C    
Sbjct: 241 FPSFPFPVESEQVKNGSF-----VEALMENDIMGNLSPAFISPATSESNYFSMSPCHMGS 300

[Close]

BLAST of CmaCh17G005620 vs. TrEMBL
Match: A0A0A7E9T7_GOSAI (WRKY90 OS=Gossypium aridum PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.1e-40
Identity = 122/332 (36.75%), Postives = 175/332 (52.71%), Query Frame = 1


Query: 1   MELMALIQELSQGKHLANQLRTHLH-PSSSSHAILLIDQILRSYDNALFSL--------- 60
           ME  AL+ EL +G+ + N L  HLH PSS    ++LI++IL SY+N+L  L         
Sbjct: 1   MEQEALLNELKEGREVTNLLMKHLHLPSSHQTRLVLIEKILGSYENSLSILNCNGLVVET 60

Query: 61  --------ALPVPTNAPVKDRHIARKRKVMPKWSEQVKVASASAVEGPLHDGFSWRKYGQ 120
                   +LP   ++    R + +KRK    W+EQ++  S ++++ P+ DGF WRKYGQ
Sbjct: 61  KPSLSTMESLPSIDHSSPDKRDVFKKRKTSSGWTEQLRACSGTSLDNPVDDGFCWRKYGQ 120

Query: 121 KDILGSKFPRGYFRCSHRFTLGCKATKQVQKSDNDPTIYEVTYKGTHTCNRPLH------ 180
           K ILGS FPRGY+RC+HR + GC A KQVQKS++DPTI+EV YKG HTCN+  H      
Sbjct: 121 KAILGSNFPRGYYRCTHRHSQGCLAIKQVQKSNDDPTIFEVKYKGRHTCNQTSHFAATYV 180

Query: 181 ---SNTQQQGQ-KPSLQHPMPPKQEQRPDDDEPSCQSFSPEVAAIHVKSETFDDID---- 240
              + ++ +G   P  QH +  KQ+Q       + Q+FS   + I VK+E  D+ +    
Sbjct: 181 SVSTESENEGNYSPKRQHQLEVKQKQ-------AQQAFSSFGSGIKVKTEDLDNREDIFP 240

Query: 241 ----------IDNGLFRPLCPPSSLFESEVQDDDQSPF-----RESELFGLC-C---DFE 279
                     + NG F       +L E+++  +    F      ES  F +  C    FE
Sbjct: 241 SFPFPVESEQVKNGSF-----VEALMENDIMGNLSPAFMSPATSESNYFSMSPCHMGSFE 300

[Close]

BLAST of CmaCh17G005620 vs. TrEMBL
Match: C9DHZ5_9ROSI (WRKY transcription factor 6 OS=(Populus tomentosa x Populus bolleana) x Populus tomentosa PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 9.1e-40
Identity = 113/279 (40.50%), Postives = 155/279 (55.56%), Query Frame = 1


Query: 2   ELMALIQELSQGKHLANQLRTHLHPSSSSHAI-LLIDQILRSYDNALFSL---AL----P 61
           E   LI ELSQGK LA QL  HL+PSSS  A   L+D+IL SY+ AL  L   AL    P
Sbjct: 8   EHKTLISELSQGKELAKQLSNHLNPSSSLEARQFLVDKILSSYEKALSLLNWGALVDQQP 67

Query: 62  VPTNAPVKDRH-----------------------IARKRKVMPKWSEQVKVASASAVEGP 121
            PT   V+  H                       + +KRK+ P+W+EQVKV S + +EGP
Sbjct: 68  KPTIGTVEPLHSLANSSPRSEVSDQDCKEECNKDVYKKRKIQPRWTEQVKVCSGTGLEGP 127

Query: 122 LHDGFSWRKYGQKDILGSKFPRGYFRCSHRFTLGCKATKQVQKSDNDPTIYEVTYKGTHT 181
           L DG+SWRKYGQKDILG+ FPRGY+RC+HR + GC ATKQVQ+SD D +I+EVTY+G HT
Sbjct: 128 LDDGYSWRKYGQKDILGANFPRGYYRCTHRHSQGCLATKQVQRSDEDHSIFEVTYQGRHT 187

Query: 182 CNR----------PLHSNTQQQGQKPSLQHPMPPKQEQRPDDDEPSCQSFSPEVAAIHVK 240
           CN+          P +  ++Q       Q  +   +E++P   E    +F  +   + VK
Sbjct: 188 CNQASPSPLASPSPKNDCSKQSKYHRKQQQQLQLLREEKPKPTEEISVNFGSDF--VQVK 247

[Close]

BLAST of CmaCh17G005620 vs. TAIR10
Match: AT2G46400.1 (AT2G46400.1 WRKY DNA-binding protein 46)

HSP 1 Score: 136.7 bits (343), Expect = 2.1e-32
Identity = 79/162 (48.77%), Postives = 99/162 (61.11%), Query Frame = 1


Query: 1   MELMALIQELSQGKHLANQLRTHL-HPSSSSHAILLIDQILRSYDNALFSLALPVPTNAP 60
           ME   +I EL  GK LAN+L  +L H SS      LI  ILR Y NA+F L+     N  
Sbjct: 3   MEEKLVINELELGKELANRLMNNLKHTSSVDSNKTLISDILRIYQNAIFMLSFNQDKNIL 62

Query: 61  VKD--------RHIARKRKVMPKWSEQVKVASASAVE-GPLHDGFSWRKYGQKDILGSKF 120
            +         +++ +KRKV  K +E+VKV  A+  E G + DG  WRKYGQK+I GSK 
Sbjct: 63  KRSLEIDGKDSKNVFKKRKVSEKNTEKVKVFVATEQENGSIDDGHCWRKYGQKEIHGSKN 122

Query: 121 PRGYFRCSHRFTLGCKATKQVQKSDNDPTIYEVTYKGTHTCN 153
           PR Y+RC+HRFT  C A KQVQKSD DP+++EV Y G HTCN
Sbjct: 123 PRAYYRCTHRFTQDCLAVKQVQKSDTDPSLFEVKYLGNHTCN 164

[Close]

BLAST of CmaCh17G005620 vs. TAIR10
Match: AT4G11070.1 (AT4G11070.1 WRKY family transcription factor)

HSP 1 Score: 132.9 bits (333), Expect = 3.1e-31
Identity = 62/115 (53.91%), Postives = 83/115 (72.17%), Query Frame = 1


Query: 66  ARKRKVMPKWSEQVKVASASAVEGPLHDGFSWRKYGQKDILGSKFPRGYFRCSHRFTLGC 125
           ++KRK++PKW+EQV+++    +EGP  D FSWRKYGQKDILG+KFPR Y+RC+ R T  C
Sbjct: 115 SKKRKMLPKWTEQVRISPERGLEGPHDDIFSWRKYGQKDILGAKFPRSYYRCTFRNTQYC 174

Query: 126 KATKQVQKSDNDPTIYEVTYKGTHTCNRPLHSNTQQQGQKPSLQHPMPPKQEQRP 181
            ATKQVQ+SD DPTI+EVTY+GTHTC++ +               P+P K+E +P
Sbjct: 175 WATKQVQRSDGDPTIFEVTYRGTHTCSQGI---------------PLPEKRETKP 214

[Close]

BLAST of CmaCh17G005620 vs. TAIR10
Match: AT4G23810.1 (AT4G23810.1 WRKY family transcription factor)

HSP 1 Score: 130.2 bits (326), Expect = 2.0e-30
Identity = 62/124 (50.00%), Postives = 85/124 (68.55%), Query Frame = 1


Query: 66  ARKRKVMPKWSEQVKVASASAVEGPLHDGFSWRKYGQKDILGSKFPRGYFRCSHRFTLGC 125
           ++KRK++PKWSE+V+++    +EGP  D FSWRKYGQKDILG+KFPR Y+RC+HR T  C
Sbjct: 132 SKKRKMLPKWSEKVRISPERGLEGPQDDVFSWRKYGQKDILGAKFPRSYYRCTHRSTQNC 191

Query: 126 KATKQVQKSDNDPTIYEVTYKGTHTCNRPLHSNTQQQGQKPSLQHPMPPKQEQRPDDDEP 185
            ATKQVQ+SD D T++EVTY+GTHTC++ +         +      + P   Q+P D   
Sbjct: 192 WATKQVQRSDGDATVFEVTYRGTHTCSQAITRTPPLASPEKRQDTRVKPAITQKPKDILE 251

Query: 186 SCQS 190
           S +S
Sbjct: 252 SLKS 255

[Close]

BLAST of CmaCh17G005620 vs. TAIR10
Match: AT5G24110.1 (AT5G24110.1 WRKY DNA-binding protein 30)

HSP 1 Score: 119.4 bits (298), Expect = 3.5e-27
Identity = 60/149 (40.27%), Postives = 88/149 (59.06%), Query Frame = 1


Query: 13  GKHLANQLRTHLHPS--SSSHAILLIDQILRSYDNALFSLALPVPTNAPVKDRHIARKRK 72
           G   + + R HL      S H  L I       D        P   ++  +   I   +K
Sbjct: 32  GSASSQETREHLAKKILQSYHKSLTIMNYSGELDQVSQGGGSPKSDDSDQEPLVIKSSKK 91

Query: 73  VMPKWSEQVKVASASAVEGPLHDGFSWRKYGQKDILGSKFPRGYFRCSHRFTLGCKATKQ 132
            MP+WS +V++A  + V+  L DGFSWRKYGQKDILG+KFPRGY+RC++R + GC+ATKQ
Sbjct: 92  SMPRWSSKVRIAPGAGVDRTLDDGFSWRKYGQKDILGAKFPRGYYRCTYRKSQGCEATKQ 151

Query: 133 VQKSDNDPTIYEVTYKGTHTCNRPLHSNT 160
           VQ+SD +  + E++Y+G H+C++  +  T
Sbjct: 152 VQRSDENQMLLEISYRGIHSCSQAANVGT 180

[Close]

BLAST of CmaCh17G005620 vs. TAIR10
Match: AT3G56400.1 (AT3G56400.1 WRKY DNA-binding protein 70)

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22
Identity = 51/94 (54.26%), Postives = 63/94 (67.02%), Query Frame = 1


Query: 59  PVKDRHIARKRKVMPKWSEQVKVASASAVEGPLHDGFSWRKYGQKDILGSKFPRGYFRCS 118
           PVK +    KRK   K SE   + S       L D FSWRKYGQK+IL +KFPR YFRC+
Sbjct: 95  PVKGKRGCYKRK---KRSETCTIESTI-----LEDAFSWRKYGQKEILNAKFPRSYFRCT 154

Query: 119 HRFTLGCKATKQVQKSDNDPTIYEVTYKGTHTCN 153
           H++T GCKATKQVQK + +P ++ +TY G HTCN
Sbjct: 155 HKYTQGCKATKQVQKVELEPKMFSITYIGNHTCN 180

[Close]

BLAST of CmaCh17G005620 vs. NCBI nr
Match: gi|659124087|ref|XP_008461982.1| (PREDICTED: probable WRKY transcription factor 53 [Cucumis melo])

HSP 1 Score: 369.0 bits (946), Expect = 7.3e-99
Identity = 198/301 (65.78%), Postives = 228/301 (75.75%), Query Frame = 1


Query: 1   MELMALIQELSQGKHLANQLRTHLHPSSSSHAILLIDQILRSYDNALFSLALP------- 60
           ME ++LIQEL+QGK LANQLR HLHPSSSSH ILL+D+ILRSY+NAL +L+         
Sbjct: 1   MEFLSLIQELNQGKQLANQLRNHLHPSSSSHGILLVDKILRSYENALLALSAGGGASVNS 60

Query: 61  --VPTNAPVKDRHIARKRKVMPKWSEQVKVASASAVEGPLHDGFSWRKYGQKDILGSKFP 120
              P NA VKD  +++KRK+M KWSEQVKV+S SAVEGP  DGFSWRKYGQKDILGS+FP
Sbjct: 61  AIAPVNAAVKDGDVSKKRKLMAKWSEQVKVSSGSAVEGPCCDGFSWRKYGQKDILGSQFP 120

Query: 121 RGYFRCSHRFTLGCKATKQVQKSDNDPTIYEVTYKGTHTCNRPLHS-NTQQQGQKPSLQH 180
           RGYFRCSHRFT GC ATKQVQKSDNDPTIY+VTY+G HTCN+ LHS NT Q+ Q   LQH
Sbjct: 121 RGYFRCSHRFTQGCLATKQVQKSDNDPTIYDVTYRGRHTCNKALHSTNTPQEHQNSLLQH 180

Query: 181 PMPPKQEQRPDDD--EPSCQSFSPEVAAIHVKSETFDDIDIDNGLFRPLCPPSSLFESEV 240
           P+PPKQE++P     +P C  FS +   I VKSE  D  + + GL +P CPPS +F SEV
Sbjct: 181 PIPPKQEEKPLQQLHDPLCFMFSSD--PIRVKSENLD--NANGGLLQPFCPPSPMFGSEV 240

Query: 241 QDDDQSPFRESE---------LFGLCCDFETGVVSIPNSVTNICIEELEEYCSFDNLE-F 280
           Q DDQSPFRESE          FGLCCDFETG VSIP+S+TNI I +LEEYCSFDNLE F
Sbjct: 241 Q-DDQSPFRESECSLTFESNDTFGLCCDFETGFVSIPSSMTNISIGDLEEYCSFDNLEMF 296

[Close]

BLAST of CmaCh17G005620 vs. NCBI nr
Match: gi|525507306|ref|NP_001267693.1| (probable WRKY transcription factor 46-like [Cucumis sativus])

HSP 1 Score: 348.6 bits (893), Expect = 1.0e-92
Identity = 199/302 (65.89%), Postives = 225/302 (74.50%), Query Frame = 1


Query: 1   MELMALIQELSQGKHLANQLRTHLHPSSSSHAILLIDQILRSYDNALFSLA--------- 60
           ME ++LIQEL+QGK LANQLRTHLHPSSSSH ILLID+ILRSY+NAL +L+         
Sbjct: 1   MEFLSLIQELNQGKQLANQLRTHLHPSSSSHGILLIDKILRSYENALLALSGGAAASVNS 60

Query: 61  LPVPTNAPVKDRHIARKRKVMPKWSEQVKVASASAVEGPLHDGFSWRKYGQKDILGSKFP 120
              P NA V+D  +++KRKVM KWSEQVKV+SASAVEGP  DGFSWRKYGQKDILGSKFP
Sbjct: 61  AIAPVNAAVQDGDVSKKRKVMAKWSEQVKVSSASAVEGPGCDGFSWRKYGQKDILGSKFP 120

Query: 121 RGYFRCSHRFTLGCKATKQVQKSDNDPTIYEVTYKGTHTCNRPLHS-NTQQQGQKPSLQH 180
           R YFRCSHRFT GC ATKQVQKSDNDPTIYEVTYKG HTCN+ LHS NT Q+ Q   LQH
Sbjct: 121 RSYFRCSHRFTQGCLATKQVQKSDNDPTIYEVTYKGRHTCNKALHSTNTPQEHQNTFLQH 180

Query: 181 PMPPKQEQRPDDD--EPSCQSFSPEVAAIHVKSETFDDIDIDN-GLFRPLCPPSSLFESE 240
           P+PPKQE +P     +P C  FS +   I VKSE   D++  N GLF+PL  PS +F SE
Sbjct: 181 PIPPKQEDKPLQQLHDPLCFMFSSD--PIRVKSE---DLEYANGGLFQPLRTPSPMFGSE 240

Query: 241 VQDDDQSPFRESE---------LFGLCCDFETGVVSIPNSVTNICIEELEEYCSFDNLE- 280
           VQ DD SPFRESE         +FGL CDFET  VSIP+S+TNI I +LEE  SFDNLE 
Sbjct: 241 VQ-DDLSPFRESECSPTFESNDMFGLWCDFETEFVSIPSSMTNISIGDLEECFSFDNLEM 296

[Close]

BLAST of CmaCh17G005620 vs. NCBI nr
Match: gi|823187147|ref|XP_012490093.1| (PREDICTED: probable WRKY transcription factor 46 [Gossypium raimondii])

HSP 1 Score: 176.8 bits (447), Expect = 5.3e-41
Identity = 125/332 (37.65%), Postives = 176/332 (53.01%), Query Frame = 1


Query: 1   MELMALIQELSQGKHLANQLRTHLH-PSSSSHAILLIDQILRSYDNALFSL--------- 60
           ME  AL+ EL +G+ + N L  HLH PSS    ++LI++IL SY+NAL  L         
Sbjct: 1   MEQGALLNELKEGREVTNLLMKHLHLPSSYQTRLVLIEKILGSYENALSILNCNGLVVET 60

Query: 61  --------ALPVPTNAPVKDRHIARKRKVMPKWSEQVKVASASAVEGPLHDGFSWRKYGQ 120
                   +LP   ++    R + +KRK    W+EQ++V S ++++ P+ DGF WRKYGQ
Sbjct: 61  RPSLSTMESLPSIDHSSPDKRDVFKKRKTSSGWTEQLRVCSGTSLDNPVDDGFCWRKYGQ 120

Query: 121 KDILGSKFPRGYFRCSHRFTLGCKATKQVQKSDNDPTIYEVTYKGTHTCNRPLH------ 180
           K ILGS FPRGY+RC+HR + GC A KQVQKS++DPTI+EV YKG HTCN+  H      
Sbjct: 121 KAILGSNFPRGYYRCTHRHSQGCLAIKQVQKSNDDPTIFEVKYKGRHTCNQTSHFAATYV 180

Query: 181 ---SNTQQQGQ-KPSLQHPMPPKQEQRPDDDEPSCQSFSPEVAAIHVKSETFDDID---- 240
              + ++ +G   P  QH +  KQ+Q       + Q+FS   + I VK+E  D+ +    
Sbjct: 181 SVSTESENEGNYSPKRQHQLEVKQKQ-------AQQAFSSFGSGIKVKTEDLDNREDIFP 240

Query: 241 ----------IDNGLFRPLCPPSSLFESEVQDDDQSPF-----RESELFGLC-C---DFE 279
                     + NG F       +L E+E+  +    F      ES  F +  C    FE
Sbjct: 241 SFPFPVESEQVKNGSF-----VEALMENEIMGNLSPAFISPATSESNYFSMSPCHMGSFE 300

[Close]

BLAST of CmaCh17G005620 vs. NCBI nr
Match: gi|662036218|gb|AIE43840.1| (WRKY transcription factor 50 [Gossypium hirsutum])

HSP 1 Score: 174.5 bits (441), Expect = 2.6e-40
Identity = 124/334 (37.13%), Postives = 175/334 (52.40%), Query Frame = 1


Query: 1   MELMALIQELSQGKHLANQLRTHLH---PSSSSHAILLIDQILRSYDNALFSL------- 60
           ME  AL+ EL +G+ + N L  HLH   PSS    ++LI++IL SY+NAL  L       
Sbjct: 1   MEQGALLNELKEGREVTNLLMKHLHLHLPSSHQTGLVLIEKILGSYENALSILNCNGLVV 60

Query: 61  ----------ALPVPTNAPVKDRHIARKRKVMPKWSEQVKVASASAVEGPLHDGFSWRKY 120
                     +LP   ++    R + +KRK    W+EQ++V S + ++ P+ DGF WRKY
Sbjct: 61  ETKPSLSTMESLPSIDHSSPDKRDVFKKRKTSSGWTEQLRVRSGTPLDNPVDDGFCWRKY 120

Query: 121 GQKDILGSKFPRGYFRCSHRFTLGCKATKQVQKSDNDPTIYEVTYKGTHTCNRPLH---- 180
           GQK ILGS FPRGY+RC+HR + GC A KQVQKS++DPTI+EV YKG HTCN+  H    
Sbjct: 121 GQKAILGSNFPRGYYRCTHRHSQGCLAIKQVQKSNDDPTIFEVKYKGRHTCNQTSHFAAT 180

Query: 181 -----SNTQQQGQ-KPSLQHPMPPKQEQRPDDDEPSCQSFSPEVAAIHVKSETFDDID-- 240
                + ++ +G   P  QH +  KQ+Q       + Q+FS   + I VK+E  D+ +  
Sbjct: 181 YVSVSTESENEGNYSPKRQHQLEVKQKQ-------AQQAFSSFGSGIKVKTEDLDNREDI 240

Query: 241 ------------IDNGLFRPLCPPSSLFESEVQDDDQSPF-----RESELFGLC-C---D 279
                       + NG F       +L E+++  +    F      ES  F +  C    
Sbjct: 241 FPSFPFPVESEQVKNGSF-----VEALMENDIMGNLSPAFISPATSESNYFSMSPCHMGS 300

[Close]

BLAST of CmaCh17G005620 vs. NCBI nr
Match: gi|727880117|gb|AIY62479.1| (WRKY90 [Gossypium aridum])

HSP 1 Score: 173.7 bits (439), Expect = 4.5e-40
Identity = 122/332 (36.75%), Postives = 175/332 (52.71%), Query Frame = 1


Query: 1   MELMALIQELSQGKHLANQLRTHLH-PSSSSHAILLIDQILRSYDNALFSL--------- 60
           ME  AL+ EL +G+ + N L  HLH PSS    ++LI++IL SY+N+L  L         
Sbjct: 1   MEQEALLNELKEGREVTNLLMKHLHLPSSHQTRLVLIEKILGSYENSLSILNCNGLVVET 60

Query: 61  --------ALPVPTNAPVKDRHIARKRKVMPKWSEQVKVASASAVEGPLHDGFSWRKYGQ 120
                   +LP   ++    R + +KRK    W+EQ++  S ++++ P+ DGF WRKYGQ
Sbjct: 61  KPSLSTMESLPSIDHSSPDKRDVFKKRKTSSGWTEQLRACSGTSLDNPVDDGFCWRKYGQ 120

Query: 121 KDILGSKFPRGYFRCSHRFTLGCKATKQVQKSDNDPTIYEVTYKGTHTCNRPLH------ 180
           K ILGS FPRGY+RC+HR + GC A KQVQKS++DPTI+EV YKG HTCN+  H      
Sbjct: 121 KAILGSNFPRGYYRCTHRHSQGCLAIKQVQKSNDDPTIFEVKYKGRHTCNQTSHFAATYV 180

Query: 181 ---SNTQQQGQ-KPSLQHPMPPKQEQRPDDDEPSCQSFSPEVAAIHVKSETFDDID---- 240
              + ++ +G   P  QH +  KQ+Q       + Q+FS   + I VK+E  D+ +    
Sbjct: 181 SVSTESENEGNYSPKRQHQLEVKQKQ-------AQQAFSSFGSGIKVKTEDLDNREDIFP 240

Query: 241 ----------IDNGLFRPLCPPSSLFESEVQDDDQSPF-----RESELFGLC-C---DFE 279
                     + NG F       +L E+++  +    F      ES  F +  C    FE
Sbjct: 241 SFPFPVESEQVKNGSF-----VEALMENDIMGNLSPAFMSPATSESNYFSMSPCHMGSFE 300

The following BLAST results are available for this feature:

BLAST of CmaCh17G005620 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WRK46_ARATH	3.8e-31	48.77	Probable WRKY transcription factor 46 OS=Arabidopsis thaliana GN=WRKY46 PE=2 SV=...	[more]
WRK41_ARATH	5.5e-30	53.91	Probable WRKY transcription factor 41 OS=Arabidopsis thaliana GN=WRKY41 PE=2 SV=...	[more]
WRK53_ARATH	3.6e-29	50.00	Probable WRKY transcription factor 53 OS=Arabidopsis thaliana GN=WRKY53 PE=1 SV=...	[more]
WRK30_ARATH	6.3e-26	40.27	Probable WRKY transcription factor 30 OS=Arabidopsis thaliana GN=WRKY30 PE=2 SV=...	[more]
WRK70_ARATH	2.1e-21	54.26	Probable WRKY transcription factor 70 OS=Arabidopsis thaliana GN=WRKY70 PE=2 SV=...	[more]

BLAST of CmaCh17G005620 vs. TrEMBL


Match Name	E-value	Identity	Description
E7CEY4_CUCSA	7.1e-93	65.89	Uncharacterized protein OS=Cucumis sativus GN=WRKY50 PE=2 SV=1	[more]
A0A0D2TD13_GOSRA	3.7e-41	37.65	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G107300 PE=4 SV=1	[more]
A0A068LD57_GOSHI	1.8e-40	37.13	WRKY transcription factor 50 OS=Gossypium hirsutum GN=WRKY50 PE=2 SV=1	[more]
A0A0A7E9T7_GOSAI	3.1e-40	36.75	WRKY90 OS=Gossypium aridum PE=2 SV=1	[more]
C9DHZ5_9ROSI	9.1e-40	40.50	WRKY transcription factor 6 OS=(Populus tomentosa x Populus bolleana) x Populus ...	[more]

BLAST of CmaCh17G005620 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46400.1	2.1e-32	48.77	WRKY DNA-binding protein 46	[more]
AT4G11070.1	3.1e-31	53.91	WRKY family transcription factor	[more]
AT4G23810.1	2.0e-30	50.00	WRKY family transcription factor	[more]
AT5G24110.1	3.5e-27	40.27	WRKY DNA-binding protein 30	[more]
AT3G56400.1	1.2e-22	54.26	WRKY DNA-binding protein 70	[more]

BLAST of CmaCh17G005620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659124087\|ref\|XP_008461982.1\|	7.3e-99	65.78	PREDICTED: probable WRKY transcription factor 53 [Cucumis melo]	[more]
gi\|525507306\|ref\|NP_001267693.1\|	1.0e-92	65.89	probable WRKY transcription factor 46-like [Cucumis sativus]	[more]
gi\|823187147\|ref\|XP_012490093.1\|	5.3e-41	37.65	PREDICTED: probable WRKY transcription factor 46 [Gossypium raimondii]	[more]
gi\|662036218\|gb\|AIE43840.1\|	2.6e-40	37.13	WRKY transcription factor 50 [Gossypium hirsutum]	[more]
gi\|727880117\|gb\|AIY62479.1\|	4.5e-40	36.75	WRKY90 [Gossypium aridum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003657	WRKY_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G005620.1	CmaCh17G005620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	GENE3D	G3DSA:2.20.25.80		coord: 80..154 score: 1.6
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 93..151 score: 1.2
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 91..153 score: 3.2
IPR003657	WRKY domain	PROFILE	PS50811	WRKY	coord: 86..154 score: 22
IPR003657	WRKY domain	unknown	SSF118290	WRKY DNA-binding domain	coord: 90..154 score: 2.22
None	No IPR available	PANTHER	PTHR32096	FAMILY NOT NAMED	coord: 1..241 score: 1.6
None	No IPR available	PANTHER	PTHR32096:SF20	SUBFAMILY NOT NAMED	coord: 1..241 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G005620	Cucsa.078810	Cucumber (Gy14) v1	cgycmaB0136
CmaCh17G005620	Cla015003	Watermelon (97103) v1	cmawmB329
CmaCh17G005620	Csa7G328830	Cucumber (Chinese Long) v2	cmacuB389
CmaCh17G005620	ClCG09G009480	Watermelon (Charleston Gray)	cmawcgB307
CmaCh17G005620	CSPI07G13560	Wild cucumber (PI 183967)	cmacpiB393
CmaCh17G005620	CmoCh08G001250	Cucurbita moschata (Rifu)	cmacmoB372
CmaCh17G005620	CmoCh17G005420	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G005620	Lsi02G020350	Bottle gourd (USVL1VR-Ls)	cmalsiB349
CmaCh17G005620	Cp4.1LG12g04760	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G005620	Cp4.1LG17g10220	Cucurbita pepo (Zucchini)	cmacpeB384
CmaCh17G005620	CsaV3_7G025370	Cucumber (Chinese Long) v3	cmacucB0463
CmaCh17G005620	Cla97C09G172330	Watermelon (97103) v2	cmawmbB388
CmaCh17G005620	Bhi09G001196	Wax gourd	cmawgoB0491
CmaCh17G005620	CsGy7G012410	Cucumber (Gy14) v2	cgybcmaB927
CmaCh17G005620	Carg04945	Silver-seed gourd	carcmaB0108
CmaCh17G005620	Carg26122	Silver-seed gourd	carcmaB1333

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh17G005620	CmaCh08G001180	Cucurbita maxima (Rimu)	cmacmaB381

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G005620	Silver-seed gourd	carcmaB0109
CmaCh17G005620	Watermelon (97103) v2	cmawmbB385
CmaCh17G005620	Cucurbita maxima (Rimu)	cmacmaB386
CmaCh17G005620	Cucurbita moschata (Rifu)	cmacmoB378
CmaCh17G005620	Watermelon (97103) v1	cmawmB351
CmaCh17G005620	Cucurbita pepo (Zucchini)	cmacpeB390