CmoCh17G004920 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G004920
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Leucine carboxyl methyltransferase, putative
Location	Cmo_Chr17 : 3848011 .. 3864499 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATATTATTACTCAATCAGGGAGTACTTAACAAATATATTCTGTCGTAATTCTTACGAGTTTGCTCCATTTCTGCCACACTTATCAAAACTGGTCTCGGAGGGTTTTGCTCAATTCAATTCTTACACGGTTCATCGCTCTTTCATGGACACGATTGATTTCTGAAGTGAACAGCTTACCAGAGCTATTTTTAGATCCCCCACTCTCCAACTTACCGTGTCACCACTGCGTTAACCTCGAAGCTCTTTGGCAATTCGAAAATGGCGAAGGCCGCTCCCGATTCACAGAGTAACAGTGCAGCAGTGCAAGCCACCAACGACGATGCCTCTGCCAGTAAATTGTGAGCAAACCCCTTTTAACGCATTATTCCCTCACTATCTTTACGCTTTCGTGACCCATTCTTCGCCTTTGGCAATTTTCAAATTCGGCGCTTCGGATTTTGGTTTGGATAACCATTTTTACTGCCTTCTCAACGTCGTTGAGGCGGTCTTTTGTTTTTACGATTCGATGTTGATTGCATGAACGCACTCTTCATCCGCAAGGAACTTTCCAGTTGGTTTGCTCGCTAAGATTTTGTTATTAAGTTTGGCATTCGGCAACGTTTAACCCTTTGATATGATAAATACTCACTCTGTCATATGGGATGCAATCATGCAAGAATTAATTGTAGTTCTACGCTCGCTGAAGAATTCCGTTCTCTCAATGACAATTTTGATCTATCATTTTAATTTGAACCTTGAATCTGGTCCATTATTTGGCAGAGTTTAAAAATCAGCTGGATTTAATTTTTTTTTTATTTTTTTATTTTTATATTTATGCTTTGGGATGTAATATTAGCTGCCTCTGTTTGGTTAACAGATCATGTGTTAGAAAGGGCTACATGAAAGACGATTTCATACACCTTTTTGTAAGAAGGCCTGTTAAGAGATCTCCAATTATTAATCGAGGTACAATCTTGTTGCATCTCTTAAGTATGTCAGTGTTTTTAGAACTTTCTTTAATCACTTTGTAGTCATTTTCTTTACGTTGTTGCCAATAAGGTTATTTTGCCCGTTGGGCTGCACTGAGGAAGCTCCTCTTTCAATTCCTCAATGTTGATAGTAACACAGAGGAACATACAAAGAAGCAGATATTGTCGCTTGGGGCTGGCTTTGATACAACGTATTTCCAATTGCAGGCAAGCTGCTTATTTAGGTCACGGGCTATAACATCTTTAGCATATTCATTTATTCTCCTTTTATATGTACATCGTATCTTCTATATTGTTCGTATATATTTATATTCATATTTTTCTTACCACATGTAAACGAATTCTTAGGTTTGGATTTGAAAGTTTGGTCATTTTCTATCTTCTCTGAGTTTATTGCAATCACTTTAGTTGTCTCTTTGTGACTTTCTTTACTTACATTCTCCGTTTGCTCCAATTAACCTCCCACTTGAAGTTGATGCATTTGATTATGCTTTTATTTAATTATTTCTTTATTTTTATTTTTTTACAGAATGAGGGTAATGCACCGCATTTATATGTGGAGTTGGACTTCAAGGAGGTTCGATTTGGAAACCTTATTCCCCTGCTTTTTCGACAGTCACTTACTTTTGTAGGAATATGTAAATGGGCTTAAATTTTAATTCAATGAGAAGAAAATTATGTCAACTGCCAATATATTACCTTTGTGGTTTTCTTTGTAGCATCGAATCTTCACATTCTTTATATATGTCCAACATGCCTCACGGGAATTCAGGGTTATGCAGTTCTTAATTTATCTATTTTTGTCCAGGTGACTACTAAGAAAGCTGCAATAATTGAAGCCTGTAGTCAGTTGAGAGAAAAACTCAGTGGAACAGTATCTATATCCCAAGGTAAGTGGTCTGTGCTATCATTTCAACATGTTTCATTTTTATATTAGAGGTGGCAGGCACAAATCTCAACCTTGTTATATATCCATTATTGTTATTTTTTCCATGTCATTTGACATTTATGGTTGGTTTCAAGGTTTTTCCTGGACCACAATGTTAAGATATAATACTCTTTCTGATTTCATATGATACGGAGCTTTTCTGCTGCCCCTAGGCTACATTAAAATTCCATCTTAATAATATCGATCTTTCCCCTTCTGCTAGATTGATTGATGAGTTAATTTGAGGGCTTGAAATTCCTAAATTTTGTTTTCATGAATATGAGGAACATTTGGATATTTTTCTTCAGTTTAGAATTGGAGTACAATAACTATTTCCATTTAAAGAGGCGTGGTAGACTGAGTCATGTAATTGTGTGTTGTTTTCATTCGTGTTACCAAATTTCCCATCTCTCAAGCTCGAAGATCTCAATTGATGTCGAAAAGGGAACTCTTGTTTCTATTAATCTTAAGCCTTGAAATGGTTTCCAACATGTAACTTTTTCAGTTAATGCTTCTGTAAAGGAGCTGAGTAATTCTTATCTTCGTAGAAGACAGAGTTCCAAAAAGATGAATATGTTTATCTGTCTGGCTTTCCAAGAAAACTTTAATGTGACCGACAAACTTCAAAGAAACTTTCCTTTTGGTCTTCGAGCCCAAATGTATGTGTATAATGCTTGAAAGCAGAAGAAGCTATAAATCATGTTCTTTTTCACTGTCCTTACGGCAGGCAGTTAAATTGGAGAAGGCACCTGAAGCTTCTTCTGACTGCATACAAAATCCAGAATAGTTTTAACATCCAGTCCAAAAAATTGTTTCATAATTGTAGGATACAGAAGTTCATTCCCCGCATACTATTTGCATACATTAGTTTTCTATAATTATTTGGATTAGGTGCCAATGTGACCTTAATTGTTCATTGCCTTTTATCGCTTATTGATGATTTATTCGTCCAACCACCTTACATTTTGCATGCTTAAGGGGAAAACTTAGATATCGTTATTGCATGTCATGACCATTGCTTGCATGATTAGCCTCTTTTAGGCCTTGGGGATTCGGCTGTCTTTTATAATGTTTACGGTTAAAGAAATACCTTCTGAGACCATTAAGATGCCTTTTAGTGATTCCCTTAGAACGGTTGAGTCTTCTAAGTCAAGGAAGCTTATCCTCTGTCCTATATTCGAAGAAAAGTGTATCATTCTTCAGTTCCTCCATTCACCAAAGTTAATCCTTTGAATCCGGATAGTATTGAGTTGAAGAAAATGTTTCAAGTCTTTTGACCCCATTTGTTAATAAACCCATCATCCAAAATTGTAGTCGACAATAATTTACTGTAACAGATCCTAATTGTATTTTCACTTAAGGTGTTATTCTTTCTCATACTCTTTCACATTTTTTTAATGATTCTGGTGCTGCGTTTGAAGTTAGTTTAAGTAGTATGGAATTTGTCATTCAACCTATGGAGAATAGTATTGATGATATTGACGATGATTTAGTGTCATCATTCCAGGAAAATGTCATTGCGATCCCTCATTCTCCTCCTTCATTAGTGACAGATTTGCTTCTCTTATTGAAGCTTGTGGTCTTGCAATTTTCGATGTGTACAATTTCTCTCATTGATTCACAAACAATTTGTTTTTGATGCTTGTTTGTTCTCTTGAGGTTTGGGTTCATTGGTTCTTTCTTGGTGTATTGGGACTCTTTTTTGCTTTTCTCCTTGGTGGATTTTCCAATTGGAGTTGTCTTTGGCTTGGTTTTGATTGTTTTGTCTCTTTCCTTGCTATTTTCTTTTGTTTTGTTCACACTGTTTTTCGTTGTTTTTGTCTCTCTTATACTTTTTTGCTCTTTTTAGGGTTACTATAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAGGCAACGCAACCTTTCACAATCGTCTCAAATACAATGGTGTATTTATAATTTCCCTCTTATTATTTGTATTTCTTAATTTTCTATAAATTCGTGTCCAACATTATCATAATTTTCTCAGATTTTAATTTGTGATGAAATATATTTTTCATTTGTTCTCCACTTGCTTAATAGGAAAAGTGCAACAGTATTCTTTCTGATTGGTGTCAAATGCTAATAATATTATTTAAAAAATGCGTATACTAACATCAATCTTGTACTTTCGAGTGACACATTTTATTGGCCGTTTCCTGTAATAATTCCCCTTTGAACGAATGCACTTATCTTTTAAGGTTCTTTTTATACTACTGATGGGAAATATAATTGTATGTATCATTTGGATGCTAGAATGAGAAATATATGACTGATTTAATGAGCTATTGAACTTGAGTGGAAATCTGGAAGATAACGGGATCTAACACGTTTCCTGCAATTTTGGTTTACTTCTTGTTGTTGTCCTTGAAATTGTAACAAATGGTTGTTGGCTCTGCAGTATTACATTTTAATTTGATGGAAAACAGCGGCAAACACATTCTACATGGTTTTTTAGCCATTTTCCTGCTTCTCAAAATATATTCATGTATTTTCAACTGCCATACATATCATTGCTTTGCAGAAAAAGGAGAAGTCCATAGCGATCACTACAAGCTACTCCCTGTTGACTTGCGTGATATTGATAAGTTAAATGATGTATTGGCTATTGCTGGTATGGATCCCAGGTATGGAAGCACATAAGATTTTTCACCTCGTGGTTCAGTGTTTAAGTGCTTTGTACATCCTTAACTATTTGGTGGATCATTTTGGTCTTTTAAGGTCATATTTCACATTTCATTCACGGGAGTTGTTCTGTTAATGTCTTTTGTGATATGCTTACTCGTCTCTGAATTCGTCGGTCTTGTGATCTTTTTAGTCATGGTGTCTTGGAGCCTGTGGGTCGTTGTGGGGGTTAAGGGGGAGGGATATTTGGATGGATGAGTGGGCTGTTTTAGTGAAATATAAGAGTGGGTTTGCACATCTGATAAATCCAACAATTTCCCTACTTTTTGGCTTCACATGGAAATTATTAATATCTTTTATCCTGATATTGTTATCAGTTTGCCGACATTTATAATTGCAGAATGCGTTTTGATATACGTGGATCCAGATTTGAGTCAGGCTATAGTTGGTTGGGCATCAAAAGCATTTTCAACAGCAATATTCTTTTTATATGAGCAGGTTTTGCTTATCTGAACTTAAACAAGTTTTGTATCTTGCATCTCTGGTGGAACTTCTTTCCTTTTGAATTCGGTTGTATTCTTGATATCTCCACTGGAACATGACTTTGTTTTAAATGATGGTTTGGTAACTTGCGACTGCAATCTTTAACAGATTCATCCAGATGATGCCTTCGGCCAACAAATGATCAGAAATTTAGAGGTACAACTGTCTTTGATAGTCCATGAATTATGTAGTCTATTCTTTTCTTTCTTCTTCTTCTTCTTCTTCTTATTATTATTATTGTTATTTTTTTTAAAGTTAAAACAAGCTTTTATTGAGAATAATGATCGAAAACAATAGAAAACAAAACGGCATTAAAAAAACCAGCACAACTAACTGAACCACCCCCACCCTAATACCAAAGGGGGTCCAATCTTTTTTAAACCAAACAAAAAAAAAAAAAGAAAAAAAAAGAAGCGAAACTTTTCATTGAAGAAATGAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGGGACCACTGAGCCACTTAGATTGACAAAGGATATATTTAAGTTTGAAGTATTCCAATTGAGGCAAATATATCAAAGAGAATCCAGCAAAAGCCTTTGAGATAGAATACCAAGAGGAGGTCTAGCTGCGTGCTGTGGAAAATTCATTCATTCCTTTCCATCCAAATTTCTGTAAAGATAGCTTTAACTGCATTTACCCATAAAAGATTGGCCTTAGGATTCAAGGGAGGGCCAATAAGTGGAACGTTAACCTTGAAAATATTAGTGAAAATCGACTTGGAATATCTTCGTTAGAGCCAATATGTACTGGTGAGAGAATACCCAAAAATTATAAACAACATTTTAAAGAATCCTTCATATTTTGTATCATTTACAACTTGAGGTTAAGTTCTTGATTATATATATGTACAAATAATTTTAATTAAAAATCGAAACTTACTATACACTGTATTACAATACACGATACACTAAATTTTAACTTCGATACATTTAACAAAACCAGAAAGTGATTGTGTATGAATTAATTAATAATCAGTTCTACTAAACACACTGAGCAGTTTAAAACATCCAGAATTGCTTTTGACCCCACCAAAAGCAATCCCAAATGCACCCTCTAGTTTTGTTCTATTTTGGCTTCTATTGTTGGGCTGTCTTTTGTATGTTTTTTGTATTCTTTCATTTTTCTCTGTGAGAGTTCGACATTCCTTAAAAAGAGAAAAAAAAAGAAAAAAAGAAAAGAGAATCAGTGTTGGGTAGTTTCAACTTACTAGTTTCGTAACAAGTGTCTTATTTTATCCCAAGTGTCCATCATAAGTGCTCTCCTCTACTATCTCTTCTAGTTAGTATGATTTTTAGGTGGGAAACACAACCAATCTTTTAGTGAATGATAGAAAGACGGTAAAATGGAAGGATGAATTTGTAAATTAGATTTGGAGAAACGTAAGAGAATTGGTTGCTATTTTTTTGTCAGCAATCATCGAAAGTAAAGGTTTTTATGCACAGTGAATGGTATGGATGACAGGAAAATTTTGGTGTCTCTAATCTTGGATAACAAAGAAATCGAGGGTTTAAAACCCTAGCTTAGATATTGTAAGCATTAGGCTGTCTTAGCTAGCCAAAATAAAGGTTTTTATGCATGGTGAATGGTATGGATGATAGGAAAATTTTGATGTCACTATCCTTGGATAACAAAGAAGTCGAGGGTTCAAAACCCTTTGGGTCTAGTAGATAAGATATAGCCAACAATGTCCAATTATAGCAAAGAAGTTGATGGTTCAAAGCCCTTGAGTGTGAATACTCAACGAGGGGAGGTGCCAAGTGTTAGGTTGTACATTTTTTAATTTTGCGACGTCAAGATCCTCGCACGCTCATGACAAGCCTTAAGAGGAACTCAAGCCTCATTCACATTTTTTTGCCAAACTTTGTGGCTTCGTCAGACCTTGGACGAGATTTGCCTTCGCCAACCGAACACAACTCATGTGGAATCTCAGCTTGTTCGGCCACACATGCCCCCTTGCGTGCATGTTCAATCGTCTGTGACTCTATTTGACTTGCCTTTTCACACTAGGTCAAGTTGTTTGGCTCGATCTTGCCTCTACTTGAGGCTAAAATTTTTCACATGCAACGTTGCATCTCGTATTCTCATCTTGGTTCCCAGTTAACATGGTCCACATGTCTTGATACCATTCCAAGTCCAGGGGTGTCATCGGCCATTGAAACTTACTCGGTCATGTTCATCAAAGAACGGACCCATGTGTCGTTCATATCGGGACATCCCAAACATTCCTTCTCCAATCGCCTCCCACTTGTTTTGACCCACCTTTACGACCCCCAAATCCCTTGTAATCCGACTTTGACTTATCCTCCAGGCACGACAGAGACATCGTACCAATGTGGCCATTGGTGGGCGTCTGCAATACGCTTATTCCTCCCCCTTTATATTATTATAATTTATTTTTTTTCCACCTGTCCTCCATCACCAAGGTTTCCCTCCCTTTATATTTCTTTTCAAAAAGTTTCAAAAAGCACAGGGTATCACACTGTGTCACACGTATGTGCAACAAGGTAGCTCGCTTAGGTCATAGGACCCATGGGTGGTGGAGAGCTAACACCATACCTCCTCCTAAGGTACATTTTGAGGCATTTTTAGTATCGTAGGAGGAAACATGGTTTTGGTGACGGTTGTATGGTATCGTGAAGAGTCCATCTAATGTTCAGTCTATACCAAATTTAGCGAGCATTCATATTTCATATGGACGGACTTAACTCCAGAGCCACATGTCCAAACTCTTTTCGGAACCCCATTTTTGAGGTTAAGGCCTGAGACCCTACCCGACTTTTTATCATGCCTATCTTTGTCCTTCTTGTCTACTTGTTGCCTCCATTGTGCCTATGCCTCATCTTGGCTTCAATGCAAACTTTATACGGTGTGTTAGATGATGCAACGTCCTCCTTAGTCGCATCTTGACACTTATTTGTCTTGGCCATCACGTGGTCGGATGGGCGCCACTTGAGGGTCGCCGCCTTGTCTGTCTCTATGTGAGGGTCACATCCTACTCTTTTTTAGTATGGTTGGTTGTGATACCAAGTACTTTAATACTTGAGGTTATATTGTACTATCTTATCTTTTATAGTTAAATACTATTTTAGTTGTTTGGGTTCTATAAAGTTGCATCCAGATTATTAACTTTTGGATTCCATATCAAGCTGTCTGATTGTATAGAATTTTAAAGAGCAACAGATAGCTACATGTGTATGTAAACTCCTGCTTTCTAAAAAAAAGTTTTATAGATATTTTCACTATAGTCTATAGGTATCTGTTTTTCGGTTATGGTTCCGAGATTGTGCTATCTACTCATTTATATGAAAGAATTTAATGTATCTGTGAACATTATTGATTCAGAGTCGAGGCTGTGCTTTGTTGGGTATCAATGCTACACCAACATTACTTGCAAAGAAAAAGCTTTTTCTTGACCAAGGATGGCAGGTAATTTTTCTTTTTGAAATTTTCTTTGCAATAAAATGAGGCTGAAATACTGCATGTTTCCGTTCTCCTTGGAAAATTCCCTTCTCCTTGGCAAACCAAACAACTGAATTAATATTGAAAGTTAAAAAGATAGAACTGATTCCCCAAGTATTCAAGGTTCTTGTAACCTCCTCACTTGAGTATTCCCACTCAATGCCTAAACCAACCAAACTATTCCTTGGCGTCATCTCCTTCCCTTCCCTCTCTTCATAACTAATTCCGACTGATATACCCTCAGTACCCTAATAATATTTAATTTCCTTATGGTATTCCTTACACTTAGCTCATTACACGTCATTCTCATGGTAATGGTGAATTTGCAAAGCTTTTACCGTAGACAAATTTGATGTCTTGAACCATTTTTTCTGAAGTAGAAATAGGAGTTCACAAGGCTTACACTTCGTTAAAGCCTTGAACAAATGCTTCCCCTTGGATAATATTGTTTGAAATTATTTTCTTGGCCATTTATTGATATTACATAGGGAACAACTAATGCTGCTATTGATGACATATAGTTGAACTGAACTGTACAGTGGATATTTGACCATTCGGGTTTTTTTCTGAGGGGTAACAATTCATTTAGAGTTAATAGCTACCAAATACCAAGTGTAACTCACCCATTGGAAATTAGAGAGGAAAGAGTATGATTGCTAAAAGGGCATTCACAGTTACACCAGTAAAGAACATTAAAACTAACCAAATTTAGGAAATCATCAAAAGTAGAAGAAATGTCCTTGAAAATTCTTCCATTCCGCACCCTCCAAAGAGTCTAGAAGAACACCCGTTAAACACAAGCCAAAAATCTTCTTAGGACCATGAAGCGGATGGCCCACAAAAACAGAAGCAAGAATCTCATAAGGTGTACATGACAAAAGACCACCAAAGGCATCCAACATGTATATCCAATAGCGATATGCAAATGGGCATAATGCAAATAAATGGCCCGCACATTCAACATTTGAACCACACATGACTAACCAGGAGGGCGAGAGAAGTAAGGCATTCAACGTTGAAGACAATCAACTTTATTATTCCCCCATGACTAAGTTCCCATTAGAAAACTTTGATATTTTTTGGGTAAACATTCTTCCAAATCACGAAATAAAGTTTATTAGTAGTTCGTCCATTTGAGTGAATCAAATCCTCTATCAAAGAGCAAACCGTGAAAGTTTAAGAAAGATTAAGAGGCCTATACCAAGAGTCATTTGTAGTCTCCTATGATAAAAGATTGGAGAGGATAGCTCATTCCGTATTTTCAAACTCATTTAAAAAGCTTGTTGAGAAGAATTCCACATAGAAGCAATTGAATCATTTGACCGAGTAGTTAAATGCTACAAGCCTGGAAAGGTATTGATAATAATTTCCCCATTAAGCCAAGAGTCACGTCAGAAACCCGTAAGAAAACCATTTCCAATCCGTATTTGAATACGATCAACAATAAGAGCTATGGTTGAACTAATGAACCACCAAGAACCCCTTAAAATAGGAGCGTGCCAAAAACAAACGGTATCCATAAATGGCATCATAATAATACATCATCATATCATATCAAATCGCTTCATCATAATACATCATAATATTACATAAACATACATGACATGCAAGGGCCACTGGGCACATATCATCATACATAAGATAAGCCTTCTGACCGAACCGATAATAATGTTACTTGCTTGACTGACTTAAGCTGTTGTCACCAATTTATCTTTAAGGAAAGTTTGATTTTGCCTTTTGAAATCTAAGCCAACCTTGTGAGTCCATGACATCAATTTCATGTTCAAATTTTTGCAAAATTATTTCACTAAATTTTACCTTATGAGACTTGAAGTACATTAGACACTTTGCATGATTAGTCTTGGTATGTATATATATGTTTGGTATGTATATATATGTTTATTATAATATTATTTTCCTACAAACAATTTAGAACAGGTTAACAATTTTTTCTCTTTTTCCCTATTTTATTATTATTATTATTATTATTATTATTATTTATTAGTTATTTTAATTATGCTCACCCGTACTCTTGCCAGTTTTAATCGATTTTTTAAAAATGGTTACTGATCATGATATGACTTCCTGACATACATAAATTGTTCTTAGTATTTAATTTCTCAAAATTAGTATTAAAGAAAATGAAAATTTAAGATATAATTTAGTGTGATTTCTTAGAATATATGTATCATTTTGATTATTTCTTTTCTAGCACATTTCAAGAGATTTATAATGAAATTGATAAATTCTGACGAAAAGTGAAATTGATAATTGACTTACCGAAATGGCCTCAAAACGATAACATTACTCCTTGTGGGGTTGAATCTGTGCTTTACCAAGAGACGAACCGTGTACGTTTTGTAGGATTGAGGTAGGTTGCAGGCCTTTTTTTCTTTTCTTTTTATTATTATTAGTTTTTTAAAATCTTTTTTGGTTGTTACAGCTAGTGAGCGTTACACAAAGCTATTAGAGTATGAGTTTTGGATGAACAAAATGTTTATGAATGTTATAGAATGTGGTCTACAAAAGGAACATTTTGTAGTTGTCCAAGCCACCAATGAGGTCTACAAAAGATTAAGGCAAGAATGCATATGACTCAGAGTAGTAAAAGATTCACGACAACGTGATGCATAGAAACTTGGAGTTTGAGGTAGGCAACATTGCATGCTTGAAGATGACCTTGATTAAAGATGTTCTGAAGTTTGGATGAAATGACAAATTAAGTTCACGCTTCAACGAGCCTTTCGACATTCTAGGACATATAAAGGAAAGGTTAGTAAGAATCTTAGCCCATGTAATGAATGCCCTATGTAATCGAGCAATAGCCTTCATTAAGGTACAGTGGCAAAAACCACCAAGGAGAAGAAGCCACAGGAGGACAAAATTGATGGGATGAAAGAGAAATATCGATTCACCATTTAAACACTTTCGAAGACAAAAGTTCTTTTTAGAGGTATATAATGTAACAACTAAAAAAAGATAATAATAATAATAATAATAATAATAATAAAAAGAATTCCTCCGATCTTTCTCTTTTTTTTTTTTATAAAAATGAGAGTTTTTCCAAAACCTCCTACGAAATGTACACTATTCGTCCTTCAGTATTGCACAGATTCAAGCTTATAAGAAGCAATGTTGAGGACATTTCAATAAGTCAATTTTTAAATTCATTTTTTGTCAGAATTTCATCAATTTCGTTACAAATCTTTTGAATTGTGCTAGAGAAGAAATACCAAAATAATACATATGTTTCAGGAAATCAAAATAAGTTTTATCTTAAATTTTCCTTTTCTTTTATCCTTACTTCGTTACAATTATTTAGATTTTAGTTAGAAATTAAATACCAAGAACTACGAGGAAATCATGTCATGATCGGTAGTTAATTCTAGATAATCGATTAAAATTGGCCAAAAGTACTGATGGATAATCGATTAAAATTGACCAAAAGTACTGGGGAACATAATTAAAAAAAAAGAAACATAGAGAAAAGAAACACGGAGAGAAAAAGAGAGAGAAAGAAAAGGAAAGATCTGAAAATTGTTAAATTGTTTGTATGAAAATAATATTATATATAAACAATCCAAGACTAATCCTGCAAAGTGTCTAATGTTCACATGAAGTCCAACACATGACCATCGTAAAATTTAGCAAATTGCTTTATAGAGATTTGAACTTGAAATTGATGTCATGGGTTCAGTTCACCTATGTTGACTTAGATTTTAAAGGACAAAATCGAACTTTCATTAAGGATAAATTAGTAACAACAATTTAAGCTAATCAGGTAAGTGACCTTATTATCAGCTTGGTTGGAAGACTTGTCATATATATATATATATATATGATGACACGTGCCTAGTAGCCCTTGCACGTGTCATGTATGTTTATGTAATATTATGATAATGCATTTTGATATGATATAATGATGTTATGTTATGATATTATGTCTTAGGTTAGCATATGACCTTGTTATTTCTAATATTTACTTTAGTTTATTTTATTATCCTTTTGTATTGTCTTAAGATATTTTTCTTAAACATGTAAGTCCATGACATTGTTTGATTTGATGGAGACGTTTTTAAATAAATGTTTCCACATAAGAAGCTATGTCATGCATACGGTAGCAACTTTAAGTCGGTAGAAACCTAGGGTCGTGACAAAATCAGTAGGAGATAGTATTGGTAATATTAGTTGGAAAGTAGTAGAGTCGTAAGAGTAATTAGATAAGGGTGTTTTAATTATAAAGGTAGGTAATTAGGATTGAGGGAGGGGTCATTTCGGTGGATTGTCCATGTGTGGGATTTGAGGAGATAAATAACCTTATGGAAGATAGGGGTATACCTAGGTCGGGTCGGGTTGGGTTGGGTTGGGTTGGGTTGAAGGAAGTTTTTGGATCAACCAAAACGTTCGGGTTTGTTGGATTAGTAATCCAATTCAACCCGAAATTTTTTACAACCGACCTGATCTGACCCGAAAGTTCGGATTGGGCTATTGGATTGTTTAAAAAAAATTAATTTTAAATTTTTTTTATCTATGCACAATTCATAATTATTCGATAGATTAATCTATAATCATTAAAATATCGTTAAAATGTTTTTTTAAAAATCTATGCATAACAAAAAGAAAAAAAGAAAAAAAAAAGATAATGAATAAGTTAGAGCTTATTATTATCCATCTCAGTTTTAGATCAAAATAAAAAAATCTAATAAACTTATTTTATACTGCTACCGTTGACACTAGAATGTCAAAAACATTTTGGACGATTTTTAATCAAGTTTAGTATTTAAAATTATTTACTTATTATGAGAAAAATGATAAAAAGAAGTGTCTGTGGCTGGAATTAAAAGTAATTGAAATTATTTAGTTTCTATGAGAAAAATGATAAAAAGAAGTGTCTGTGGCTGGAATTAAACCCGCACGGGGAGGAACGATAGTTCTGCCGTTTTACCACTCCAGCACACCTATAAATATGCAAAACATATTGATATACTTTATAGGATTTTTGTTCGGTTCGGGTCAACTCGAAATTTTGTACAGTGAACCCGAAACTCGAACTGAATCTTTTCGGGTTAAGAAAATTAACCCAACACGAAATGATAATCCAACCCAACCCAACACGTATAATTCGGGTTGAGTCGTTTCGAGTTGCCGGGTTCAATGTAGACCCCTACCCGAAGGGCTATTGTTATGTTGTAATTTTTCTTTGATACTGCAATATATTACTATCTCTTGTTTTCTTGTGTTTGGATACCTAACAAACCCATCATTGGATCAAATTCCCCCACTTCTTTTTCCTTTTAACTAAAACCAAATAGAACCGTATTATCTAATACATATTTCCAGAGCTACAATGGTCTACAAGTGGTTGTGAAGCTGTGTTTTTTTTCCTGTGGTTGTTAGCTTTTCATATTGTTTTAGTTGAAGATTGTGATGTGTGAGTACCCTGTGATGTTCTCTTTAGTGACAGTACGTTCTACATTCCTATATATTTATTTAATCTGTTTTGGTTTAATTATTTATAGGAGACTATTTGAATATTGTCTCTTTTGGCTGATAGACAGCTGCAGCATGGGACATGCTGAAAGTGTATAATAACTTGATCGAAGCTCAAGAAAGGCGAAGGTTCGTTTTAGAGTGGTTTTAGCCATCCTCCCTCCTTTGTTTATCTATTGTTGTCAATCTGATGCCATGGTTTGTTTAGTGGTTCATTCCTGTGATGTTTGATGCATTGGTAAACTTGCTTGTGGAAGAAAAAGAATCAAATAGTTGAAATATGAGTGATAAAAAAAAGAATAGAAAAGAAAAGAAAAAAAGTTCAACACCAAACTTCATTTTCGATACATTTGTAATTATATCTAGTGAGATAGAAGGGGATTTTGCTTAATTTATTGATAAAGTTGTGTCTCAAATCTAAGATAATGAATATGGATACAAGACACTAGATACGACACCGACATTGCGACATGTCGTTTTTTAAAAATTTAGGACATGATTTTATACATTTATATGCTTAAAAAGTTAGTTGGATGTATTTCACTCTCAAAATTTATTATTTTTGTCATATATATGTTTATTTAGTATACTTAATAACTGTTCGATGCATCTAACACATCTGTACACTAACACGTGTTCAACTAAGTATTGGACACGTGTTGGACATGGACATGCTAGCCAGAGTAAAGTGTACGTGCTTCTTAGTCTCAAACTAATGTAGCTTTTTACTTGTAATTATTTTCTTTGTTTATTTTATTTGTTTCTGTAAGCTTTCTAGTTACCTTAAGGTTGAAATTACTTTACCGTATAATTGGTTCTAATGCCTTTGATATTTGGGCTTCATATAAAGACATGGAATCCCTTTTGATTAGCTTCATCAATAATCTAATTAGTTAACAACCATCGTGCATTCAGCATGTGCCTTTTTGAAGGTTTATTGATGTCTTCTTTTCTTTCATATGATTTTCCTTTTTTCCTCTTTGATTTTTCCAATTTTTTCGAGATGTATAACAGGGAAGATTTTCATGTTTGACACTTTTGTTCCTCAGAATTGAACGGCTGGAGTTATTTGATGAATTTGAGGAGTGGTACATGATGCAGGCAAGTTTATAACCTATTGTTTTAATGAGAAAAGGCATGAGCGTTTGAATTCCCCTTCTCTTCTTGTATGTTCCCTGCTCAAACTGTTGAGATTTGAGATTTTTCCTTAACTTATTGTGAGTTTCATTGGATGGTTTCCAGGAGCATTACTGCGTGGCCTATGCAATCAATGATTCCCTGGTGAGTCTATTTCGTGACCATATTTGTTTAATATTTTCTTTTATGATTCCTTATTAAGCGACTCCATGTTCTAGACTAATTTATGGCAATACTTTGTGTACTGTAATGATCTTGCCACATAAATTTGATTTTGTCTCATAATGCTCTGGTATTAGACATATTTAATCATTTCAATCCAAGTATTTTACAAAAGATACTGAAAATTCCTTGATGGATAACGGCATTACAGGGTGGAAAGTTTGTTCTTTATATCATCATTCATACTGGCTCATAAGTTGCTTCCTTTTGTGACCCATTTTCACTAGCTTTTTAGACTTTGATTCTCTTGTATGGTCACTTTTTCCTTTACATATGTTATGAACTGGCTTTATCATGAATCTGTTTGTCATGAGCAGTCCATGTCAAAATGAAGAAGATGAATTTGATTATTTAATGATGAAACTTGACATATGTGTAATGAACTGACACGCAATGGACAATTTGAATTACTTCTCTTTCTTTTCCCGTTTGAAGGACACTGTCTTATAACTCTATGTTGCTTTCCTTTTATGACCCCAGGGGCTTTTTGGGAATTTTGGCTTTCCCCGAGACCCGAACGCGCTTGACCCTCCCTCACCAGCATGAGACATACAGAGCTTCCTTCTGGCTACTGCAGCTGCTGGCAATGCTCTGATTGACTCTATCTCTGTATAAGTATGTTGATATTCATTTGTTTGAGCTGCTGGGGGTTTAATATTGATTGAATAAATCTGTTCTTTTTCCCTCTTGTTCTTGATTGAGTTTGTTCCAGATGTTTGGAAAGTGGAACATAGTGGGTCCCTTGAGTTGAAGCATGTAGTAATTAATGGCTATTTTGACTTGTGGGGACTGTGGCATGTGCCAAACATAATGCGCCATTGTTGCCCTCTTTGCTTTATTGCTCCACTTCTCTTTTTCTCGTCTCTTTTTAGTTTGTTGGGATTGGATCAAAGAGATTATGCCTCAAATTCACACTTTATGTGCTCAATTATGCCTATATTTTTATATGTTCTACTTTTTTAAGTCTATACAGC

mRNA sequence

AATATTATTACTCAATCAGGGAGTACTTAACAAATATATTCTGTCGTAATTCTTACGAGTTTGCTCCATTTCTGCCACACTTATCAAAACTGGTCTCGGAGGGTTTTGCTCAATTCAATTCTTACACGGTTCATCGCTCTTTCATGGACACGATTGATTTCTGAAGTGAACAGCTTACCAGAGCTATTTTTAGATCCCCCACTCTCCAACTTACCGTGTCACCACTGCGTTAACCTCGAAGCTCTTTGGCAATTCGAAAATGGCGAAGGCCGCTCCCGATTCACAGAGTAACAGTGCAGCAGTGCAAGCCACCAACGACGATGCCTCTGCCAGTAAATTATCATGTGTTAGAAAGGGCTACATGAAAGACGATTTCATACACCTTTTTGTAAGAAGGCCTGTTAAGAGATCTCCAATTATTAATCGAGGTTATTTTGCCCGTTGGGCTGCACTGAGGAAGCTCCTCTTTCAATTCCTCAATGTTGATAGTAACACAGAGGAACATACAAAGAAGCAGATATTGTCGCTTGGGGCTGGCTTTGATACAACGTATTTCCAATTGCAGAATGAGGGTAATGCACCGCATTTATATGTGGAGTTGGACTTCAAGGAGGTGACTACTAAGAAAGCTGCAATAATTGAAGCCTGTAGTCAGTTGAGAGAAAAACTCAGTGGAACAGTATCTATATCCCAAGAAAAAGGAGAAGTCCATAGCGATCACTACAAGCTACTCCCTGTTGACTTGCGTGATATTGATAAGTTAAATGATGTATTGGCTATTGCTGGTATGGATCCCAGTTTGCCGACATTTATAATTGCAGAATGCGTTTTGATATACGTGGATCCAGATTTGAGTCAGGCTATAGTTGGTTGGGCATCAAAAGCATTTTCAACAGCAATATTCTTTTTATATGAGCAGATTCATCCAGATGATGCCTTCGGCCAACAAATGATCAGAAATTTAGAGAGTCGAGGCTGTGCTTTGTTGGGTATCAATGCTACACCAACATTACTTGCAAAGAAAAAGCTTTTTCTTGACCAAGGATGGCAGACAGCTGCAGCATGGGACATGCTGAAAGTGTATAATAACTTGATCGAAGCTCAAGAAAGGCGAAGAATTGAACGGCTGGAGTTATTTGATGAATTTGAGGAGTGGTACATGATGCAGGAGCATTACTGCGTGGCCTATGCAATCAATGATTCCCTGGGGCTTTTTGGGAATTTTGGCTTTCCCCGAGACCCGAACGCGCTTGACCCTCCCTCACCAGCATGAGACATACAGAGCTTCCTTCTGGCTACTGCAGCTGCTGGCAATGCTCTGATTGACTCTATCTCTGTATAAGTATGTTGATATTCATTTGTTTGAGCTGCTGGGGGTTTAATATTGATTGAATAAATCTGTTCTTTTTCCCTCTTGTTCTTGATTGAGTTTGTTCCAGATGTTTGGAAAGTGGAACATAGTGGGTCCCTTGAGTTGAAGCATGTAGTAATTAATGGCTATTTTGACTTGTGGGGACTGTGGCATGTGCCAAACATAATGCGCCATTGTTGCCCTCTTTGCTTTATTGCTCCACTTCTCTTTTTCTCGTCTCTTTTTAGTTTGTTGGGATTGGATCAAAGAGATTATGCCTCAAATTCACACTTTATGTGCTCAATTATGCCTATATTTTTATATGTTCTACTTTTTTAAGTCTATACAGC

Coding sequence (CDS)

ATGGCGAAGGCCGCTCCCGATTCACAGAGTAACAGTGCAGCAGTGCAAGCCACCAACGACGATGCCTCTGCCAGTAAATTATCATGTGTTAGAAAGGGCTACATGAAAGACGATTTCATACACCTTTTTGTAAGAAGGCCTGTTAAGAGATCTCCAATTATTAATCGAGGTTATTTTGCCCGTTGGGCTGCACTGAGGAAGCTCCTCTTTCAATTCCTCAATGTTGATAGTAACACAGAGGAACATACAAAGAAGCAGATATTGTCGCTTGGGGCTGGCTTTGATACAACGTATTTCCAATTGCAGAATGAGGGTAATGCACCGCATTTATATGTGGAGTTGGACTTCAAGGAGGTGACTACTAAGAAAGCTGCAATAATTGAAGCCTGTAGTCAGTTGAGAGAAAAACTCAGTGGAACAGTATCTATATCCCAAGAAAAAGGAGAAGTCCATAGCGATCACTACAAGCTACTCCCTGTTGACTTGCGTGATATTGATAAGTTAAATGATGTATTGGCTATTGCTGGTATGGATCCCAGTTTGCCGACATTTATAATTGCAGAATGCGTTTTGATATACGTGGATCCAGATTTGAGTCAGGCTATAGTTGGTTGGGCATCAAAAGCATTTTCAACAGCAATATTCTTTTTATATGAGCAGATTCATCCAGATGATGCCTTCGGCCAACAAATGATCAGAAATTTAGAGAGTCGAGGCTGTGCTTTGTTGGGTATCAATGCTACACCAACATTACTTGCAAAGAAAAAGCTTTTTCTTGACCAAGGATGGCAGACAGCTGCAGCATGGGACATGCTGAAAGTGTATAATAACTTGATCGAAGCTCAAGAAAGGCGAAGAATTGAACGGCTGGAGTTATTTGATGAATTTGAGGAGTGGTACATGATGCAGGAGCATTACTGCGTGGCCTATGCAATCAATGATTCCCTGGGGCTTTTTGGGAATTTTGGCTTTCCCCGAGACCCGAACGCGCTTGACCCTCCCTCACCAGCATGA

Homology

[Close]

BLAST of CmoCh17G004920 vs. Swiss-Prot
Match: TYW4_MOUSE (tRNA wybutosine-synthesizing protein 4 OS=Mus musculus GN=Lcmt2 PE=2 SV=4)

HSP 1 Score: 225.3 bits (573), Expect = 9.8e-58
Identity = 126/333 (37.84%), Postives = 194/333 (58.26%), Query Frame = 1


Query: 9   QSNSAAVQATNDDASASKLSCVRKGYMKDDFIHLFVRRPVKRSPIINRGYFARWAALRKL 68
           Q  +  VQ+TND +S SK S    GY++D F  L V  PV+R+P+I+RGY+ R  A+R  
Sbjct: 7   QRRAGTVQSTNDSSSLSKRSLAAHGYVRDPFAALLVPGPVRRTPLIHRGYYVRARAVRHC 66

Query: 69  LFQFLNVDSNTEEHTKKQILSLGAGFDTTYFQLQNEGNAPHLYV-ELDFKEVTTKKAAII 128
           +  FL + S     T+ QILSLG+G D+ YF+L+  G      V E+DF +V+  KA  I
Sbjct: 67  VRAFLELTSALPSRTRAQILSLGSGSDSLYFRLKAAGLLARAAVWEVDFPDVSRLKAERI 126

Query: 129 EACSQLREKLSGTVSISQEKGEV--HSDHYKLLPVDLRDIDKLNDVLAIAGMDPSLPTFI 188
           E   +LR + +G   I      +   S  Y++L  DLR++ +L + L  AG+D + PT +
Sbjct: 127 EETPELRAQ-TGPFKIGDSASSLCFESADYRILGADLRELQRLGEALDGAGLDATSPTLL 186

Query: 189 IAECVLIYVDPDLSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESRGCALLGI 248
           +AE VL Y++P  + A++ WA++ F  A+F +YEQ+ P DAFGQ M+++ +     L G+
Sbjct: 187 LAEAVLTYLEPSSATALIAWAAQRFPDALFVIYEQMQPGDAFGQIMLQHFQRLHSPLHGL 246

Query: 249 NATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDEFEEWYMMQEH 308
              P + A+++ FL  GW   +A D+ + Y  L+ A+ER+R+E LE FDE+EEW++   H
Sbjct: 247 ELFPVVKAQRQRFLQAGWTACSALDLNEFYRRLLSAEERQRVETLEPFDEYEEWHLKCSH 306

Query: 309 YCV-AYAINDSLGLFGNFGFPRDPNALDPPSPA 338
           Y + A +  D L     F        +DP SP+
Sbjct: 307 YFILAASRGDILSETPVFEPSEASFQIDPASPS 338

[Close]

BLAST of CmoCh17G004920 vs. Swiss-Prot
Match: TYW4_RAT (tRNA wybutosine-synthesizing protein 4 OS=Rattus norvegicus GN=Lcmt2 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 7.0e-56
Identity = 120/306 (39.22%), Postives = 180/306 (58.82%), Query Frame = 1


Query: 9   QSNSAAVQATNDDASASKLSCVRKGYMKDDFIHLFVRRPVKRSPIINRGYFARWAALRKL 68
           Q  +  VQ+TND +S SK S   +GY+ D F  L V   V+R+P+I+RGY+ R  A+R  
Sbjct: 7   QRRTGTVQSTNDSSSLSKRSLAAQGYVSDAFAPLLVPGIVRRTPLIHRGYYVRARAVRHC 66

Query: 69  LFQFLNVDSNTEEHTKKQILSLGAGFDTTYFQLQNEGNAPHLYV-ELDFKEVTTKKAAII 128
           +  FL++       T+ QILSLG+G D+ YF+L+  G      V E+DF +V+  KA  I
Sbjct: 67  VRAFLDLTGAIRSPTRAQILSLGSGSDSLYFRLKAAGLLTRTAVWEVDFPDVSRLKAKRI 126

Query: 129 EACSQLREKLSGTVSISQEKGEV--HSDHYKLLPVDLRDIDKLNDVLAIAGMDPSLPTFI 188
           E   +L  + +G   I      +   S  Y++L  DLR++ +L + L  AG+D + PT I
Sbjct: 127 EETPELCAQ-TGPFKIGDSASTLCFESSDYRILGADLRELQRLGEALDSAGLDATSPTLI 186

Query: 189 IAECVLIYVDPDLSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESRGCALLGI 248
           +AE VL Y++P  + A++ W ++ F  A+F +YEQ+ P DAFGQ M+++       L G+
Sbjct: 187 LAEAVLTYLEPSRAAALIAWVAQRFPNALFVIYEQMKPGDAFGQIMLQHFRRLNSPLHGL 246

Query: 249 NATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDEFEEWYMMQEH 308
              P + A+++ FL  GW T +A D+ + Y  LI A ERRR+E LE FDEFEEW++   H
Sbjct: 247 ELFPDVEAQRQRFLQAGWTTCSALDLNEFYRRLIPADERRRVETLEPFDEFEEWHLKCSH 306

Query: 309 YCVAYA 312
           Y +  A
Sbjct: 307 YFILAA 311

[Close]

BLAST of CmoCh17G004920 vs. Swiss-Prot
Match: TYW4_HUMAN (tRNA wybutosine-synthesizing protein 4 OS=Homo sapiens GN=LCMT2 PE=1 SV=3)

HSP 1 Score: 214.5 bits (545), Expect = 1.7e-54
Identity = 124/341 (36.36%), Postives = 194/341 (56.89%), Query Frame = 1


Query: 9   QSNSAAVQATNDDASASKLSCVRKGYMKDDFIHLFVRRPVKRSPIINRGYFARWAALRKL 68
           +  + AVQ TND ++ SK S   +GY++D F  L V    +R+P+I+RGY+ R  A+R  
Sbjct: 7   ERRAGAVQNTNDSSALSKRSLAARGYVQDPFAALLVPGAARRAPLIHRGYYVRARAVRHC 66

Query: 69  LFQFLNVDSNTEEHTKKQILSLGAGFDTTYFQLQNEGNAPHLYV-ELDFKEVTTKKAAII 128
           +  FL      +   + QILSLGAGFD+ YF+L+  G      V E+DF +V  +KA  I
Sbjct: 67  VRAFLEQIGAPQAALRAQILSLGAGFDSLYFRLKTAGRLARAAVWEVDFPDVARRKAERI 126

Query: 129 EACSQLREKLSGTVSISQEKGE------VHSDHYKLLPVDLRDIDKLNDVLAIAGMDPSL 188
               +L   L+G      E+GE        S  Y +L +DLR + ++ + L  AG+D + 
Sbjct: 127 GETPELCA-LTGPF----ERGEPASALCFESADYCILGLDLRQLQRVEEALGAAGLDAAS 186

Query: 189 PTFIIAECVLIYVDPDLSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESRGCA 248
           PT ++AE VL Y++P+ + A++ WA++ F  A+F +YEQ+ P DAFGQ M+++       
Sbjct: 187 PTLLLAEAVLTYLEPESAAALIAWAAQRFPNALFVVYEQMRPQDAFGQFMLQHFRQLNSP 246

Query: 249 LLGINATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDEFEEWYM 308
           L G+   P + A+++ FL  GW    A DM + Y+  + A+ERRR+E +E FDEFEEW++
Sbjct: 247 LHGLERFPDVEAQRRRFLQAGWTACGAVDMNEFYHCFLPAEERRRVENIEPFDEFEEWHL 306

Query: 309 MQEHYCVAYA-----INDSLGLFGNFGFPRDPNALDPPSPA 338
              HY +  A     ++ +L    +  FPR    ++P SP+
Sbjct: 307 KCAHYFILAASRGDTLSHTLVFPSSEAFPR----VNPASPS 338

[Close]

BLAST of CmoCh17G004920 vs. Swiss-Prot
Match: LCMT1_HUMAN (Leucine carboxyl methyltransferase 1 OS=Homo sapiens GN=LCMT1 PE=1 SV=2)

HSP 1 Score: 201.8 bits (512), Expect = 1.2e-50
Identity = 122/315 (38.73%), Postives = 179/315 (56.83%), Query Frame = 1


Query: 10  SNSAAVQATNDDASASKLSCVRKGYMKDDFIHLFVRRPVKR-SPIINRGYFARWAALRKL 69
           ++   V+ T +DAS  K   V  GY  D +I  FVR   +R +P INRGYFAR   + +L
Sbjct: 21  ADDEGVRGTCEDASLCKRFAVSIGYWHDPYIQHFVRLSKERKAPEINRGYFARVHGVSQL 80

Query: 70  LFQFLNVDSNTEEHTKKQILSLGAGFDTTYFQLQNEGNAPHLYVELDFKEVTTKKAAIIE 129
           +  FL     TE H   QI++LGAG DTT+++L++E   P  Y E+DF  + T+K   I+
Sbjct: 81  IKAFLR---KTECHC--QIVNLGAGMDTTFWRLKDEDLLPSKYFEVDFPMIVTRKLHSIK 140

Query: 130 ACSQLRE---KLSGTVSISQEKGEVHSDHYKLLPVDLRDIDKLNDVLAIAGMDPSLPTFI 189
               L     +L    ++  +   + S  Y ++  DLRD+ +L + L    M+  LPT +
Sbjct: 141 CKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLL 200

Query: 190 IAECVLIYVDPDLSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESRGCALLGI 249
           IAECVL+Y+ P+ S  ++ WA+ +F  A+F  YEQ++  D FGQ MI NL  R C L G+
Sbjct: 201 IAECVLVYMTPEQSANLLKWAANSFERAMFINYEQVNMGDRFGQIMIENLRRRQCDLAGV 260

Query: 250 NATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDEFEEWYMMQEH 309
               +L ++K+  L  GW+TA+A DM+++YN L  A E  RIE LE  DE E    +  H
Sbjct: 261 ETCKSLESQKERLLSNGWETASAVDMMELYNRLPRA-EVSRIESLEFLDEMELLEQLMRH 320

Query: 310 YCVAYAI--NDSLGL 319
           YC+ +A    + LGL
Sbjct: 321 YCLCWATKGGNELGL 329

[Close]

BLAST of CmoCh17G004920 vs. Swiss-Prot
Match: LCMT1_RAT (Leucine carboxyl methyltransferase 1 OS=Rattus norvegicus GN=Lcmt1 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 6.4e-49
Identity = 116/314 (36.94%), Postives = 179/314 (57.01%), Query Frame = 1


Query: 2   AKAAPDSQSNSAAVQATNDDASASKLSCVRKGYMKDDFIHLFVRRPVKR-SPIINRGYFA 61
           +  A     +   V+ T +DAS  K   V  G+  D +I   VR+  +R +P INRGYFA
Sbjct: 11  SSCASSCDFDDEGVRGTCEDASLCKRFAVSIGHWHDPYIEHLVRQSKERKAPEINRGYFA 70

Query: 62  RWAALRKLLFQFLNVDSNTEEHTKKQILSLGAGFDTTYFQLQNEGNAPHLYVELDFKEVT 121
           R   + +L+  FL      +   + QIL+LGAG DTT+++L++EG  P+ Y E+DF  + 
Sbjct: 71  RVHGVSQLIKAFLR-----KTECRCQILNLGAGMDTTFWKLKDEGLLPNKYFEVDFPMIV 130

Query: 122 TKKAAIIEACSQLRE---KLSGTVSISQEKGEVHSDHYKLLPVDLRDIDKLNDVLAIAGM 181
           T+K   I+    L     +L    ++  +   + S  Y ++  DLRD+ +L + L    M
Sbjct: 131 TRKLHTIKNKPLLFRPIMELHPEDTLQIDSHMLDSKRYAIIGADLRDLSELEEKLKKCNM 190

Query: 182 DPSLPTFIIAECVLIYVDPDLSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLES 241
           +  LPT +I ECVL+Y+ P+ S  ++ WA+++F TA+F  YEQ++ DD FGQ MI NL  
Sbjct: 191 NTQLPTLLITECVLVYMTPEQSANLLKWAARSFETAMFINYEQVNMDDRFGQIMIENLRR 250

Query: 242 RGCALLGINATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDEFE 301
           R C L G+    +L ++K+  L  GW+TA+A +M+++Y+ L  A E  RIE LE  DE E
Sbjct: 251 RQCDLAGVETCKSLESQKERLLLNGWETASAVNMMELYSGLPRA-EVNRIESLEFLDEME 310

Query: 302 EWYMMQEHYCVAYA 312
               +  HYC+ +A
Sbjct: 311 LLEQLMRHYCLCWA 318

[Close]

BLAST of CmoCh17G004920 vs. TrEMBL
Match: A0A0A0KCH5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G104610 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 7.6e-158
Identity = 281/303 (92.74%), Postives = 293/303 (96.70%), Query Frame = 1


Query: 1   MAKAAPDSQSNSAAVQATNDDASASKLSCVRKGYMKDDFIHLFVRRPVKRSPIINRGYFA 60
           MAKAAPDSQSN AAVQATNDDASASKLSCVRKGYMKDD+IHLFVR+PVKRSPIINRGYFA
Sbjct: 1   MAKAAPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRKPVKRSPIINRGYFA 60

Query: 61  RWAALRKLLFQFLNVDSNTEEHTKKQILSLGAGFDTTYFQLQNEGNAPHLYVELDFKEVT 120
           RWAALRKLLFQFLNV SNTEEHTKKQILSLGAGFDT YFQLQNEGNAPHLYVELDF EVT
Sbjct: 61  RWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTMYFQLQNEGNAPHLYVELDFLEVT 120

Query: 121 TKKAAIIEACSQLREKLSGTVSISQEKGEVHSDHYKLLPVDLRDIDKLNDVLAIAGMDPS 180
           +KKAAIIE+CSQLREK+SGTVSIS EKGEVHSDHYKLLPVDLR+ ++LNDVL +AGMDPS
Sbjct: 121 SKKAAIIESCSQLREKISGTVSISLEKGEVHSDHYKLLPVDLRETNQLNDVLVLAGMDPS 180

Query: 181 LPTFIIAECVLIYVDPDLSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESRGC 240
           LPTFIIAECVLIY+DPD SQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESRGC
Sbjct: 181 LPTFIIAECVLIYLDPDSSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESRGC 240

Query: 241 ALLGINATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDEFEEWY 300
           ALLGINATP+LLAKK LFLDQGWQTAAAWDMLKVY NLIEAQERRRIERLELFDEFEEW+
Sbjct: 241 ALLGINATPSLLAKKNLFLDQGWQTAAAWDMLKVYRNLIEAQERRRIERLELFDEFEEWH 300

Query: 301 MMQ 304
           MMQ
Sbjct: 301 MMQ 303

[Close]

BLAST of CmoCh17G004920 vs. TrEMBL
Match: D7SLY5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g01560 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 1.5e-153
Identity = 267/333 (80.18%), Postives = 301/333 (90.39%), Query Frame = 1


Query: 7   DSQSNSAAVQATNDDASASKLSCVRKGYMKDDFIHLFVRRPVKRSPIINRGYFARWAALR 66
           DS SN AAVQATNDDASASKLSC++KGYMKDD+IHLFVRRPV+RSPIINRGYFARWAALR
Sbjct: 3   DSHSNRAAVQATNDDASASKLSCIKKGYMKDDYIHLFVRRPVRRSPIINRGYFARWAALR 62

Query: 67  KLLFQFLNVDSNTEE--HTKKQILSLGAGFDTTYFQLQNEGNAPHLYVELDFKEVTTKKA 126
           KLL+QFL+ + + +E  H KKQILSLGAGFDTTYFQLQ+EG AP++YVELDFKEVT+KKA
Sbjct: 63  KLLYQFLSCERDAKEQGHAKKQILSLGAGFDTTYFQLQDEGKAPYIYVELDFKEVTSKKA 122

Query: 127 AIIEACSQLREKLSGTVSISQEKGEVHSDHYKLLPVDLRDIDKLNDVLAIAGMDPSLPTF 186
           AIIE CSQLR+K+  T SIS+EKGEV SDHYKLLPVDLRDI KL+DV+A+A MDPSLPTF
Sbjct: 123 AIIETCSQLRDKVGATASISREKGEVLSDHYKLLPVDLRDIQKLDDVIAMANMDPSLPTF 182

Query: 187 IIAECVLIYVDPDLSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESRGCALLG 246
           IIAECVLIY+DPD S+ IV WASK FSTA+FFLYEQIHPDDAFGQQMIRNLESRGCALLG
Sbjct: 183 IIAECVLIYLDPDSSRGIVAWASKKFSTAVFFLYEQIHPDDAFGQQMIRNLESRGCALLG 242

Query: 247 INATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDEFEEWYMMQE 306
           I  TPTLLAK+KLFLDQGWQ A AWDML++Y+N ++AQERRRIERLELFDEFEEW+MMQE
Sbjct: 243 IYETPTLLAKEKLFLDQGWQRAVAWDMLRIYSNFVDAQERRRIERLELFDEFEEWHMMQE 302

Query: 307 HYCVAYAINDSLGLFGNFGFPRDPNALDPPSPA 338
           HYCVAYAIND++GL G+FGFP+D +    PS A
Sbjct: 303 HYCVAYAINDAMGLLGDFGFPKDDHVPCSPSAA 335

[Close]

BLAST of CmoCh17G004920 vs. TrEMBL
Match: A0A061DUQ6_THECC (Leucine carboxyl methyltransferase isoform 1 OS=Theobroma cacao GN=TCM_005709 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 1.2e-150
Identity = 265/339 (78.17%), Postives = 301/339 (88.79%), Query Frame = 1


Query: 1   MAKAAPDSQSNSAAVQATNDDASASKLSCVRKGYMKDDFIHLFVRRPVKRSPIINRGYFA 60
           MA +A DS+SN AAVQATNDDA+ASKLSCV+KGYMKDD+IHLFVRRPV+RSPIINRGYFA
Sbjct: 1   MANSAADSRSNRAAVQATNDDAAASKLSCVKKGYMKDDYIHLFVRRPVRRSPIINRGYFA 60

Query: 61  RWAALRKLLFQFLNVDSNTEE--HTKKQILSLGAGFDTTYFQLQNEGNAPHLYVELDFKE 120
           RWAALRKLL+QFL+ +    E  HTKKQILSLGAGFDTTYFQLQ+EG AP+LYVELDFKE
Sbjct: 61  RWAALRKLLYQFLDCEGCNGEKGHTKKQILSLGAGFDTTYFQLQDEGKAPYLYVELDFKE 120

Query: 121 VTTKKAAIIEACSQLREKLSGTVSISQEKGEVHSDHYKLLPVDLRDIDKLNDVLAIAGMD 180
           VT+KKA++IE+CSQLR+K+  T SIS E GEV SD YKLLPVDLRDI KL+D++++A MD
Sbjct: 121 VTSKKASLIESCSQLRDKVGATASISLENGEVLSDQYKLLPVDLRDIQKLDDIISLANMD 180

Query: 181 PSLPTFIIAECVLIYVDPDLSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESR 240
           P LPTFIIAECVLIY+DPD S++IVGWASK FSTAIFFLYEQIHPDDAFGQQMIRNLESR
Sbjct: 181 PGLPTFIIAECVLIYLDPDSSRSIVGWASKTFSTAIFFLYEQIHPDDAFGQQMIRNLESR 240

Query: 241 GCALLGINATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDEFEE 300
           GCALLGI ATPTLLAK+KLFLDQGWQ A AWDML+VY+  ++A+ERRRIE LELFDEFEE
Sbjct: 241 GCALLGIYATPTLLAKEKLFLDQGWQKAVAWDMLRVYSEFVDARERRRIEPLELFDEFEE 300

Query: 301 WYMMQEHYCVAYAINDSLGLFGNFGFPRDPNALDPPSPA 338
           W+MMQEHYCVAYAIND++G +G FGFP D   +   SPA
Sbjct: 301 WHMMQEHYCVAYAINDAMGWYGKFGFPDDQQHVPNTSPA 339

[Close]

BLAST of CmoCh17G004920 vs. TrEMBL
Match: B9RCZ7_RICCO (Leucine carboxyl methyltransferase, putative OS=Ricinus communis GN=RCOM_1608280 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 1.2e-150
Identity = 264/327 (80.73%), Postives = 298/327 (91.13%), Query Frame = 1


Query: 1   MAKAAPDSQSNSAAVQATNDDASASKLSCVRKGYMKDDFIHLFVRRPVKRSPIINRGYFA 60
           MAK  PDS SN AAVQATNDDASASKLSCV+KGYMKDD+IHLFVRRPV+RSPIINRGY+A
Sbjct: 1   MAKPVPDSHSNRAAVQATNDDASASKLSCVKKGYMKDDYIHLFVRRPVRRSPIINRGYYA 60

Query: 61  RWAALRKLLFQFLNVDSNTEE--HTKKQILSLGAGFDTTYFQLQNEGNAPHLYVELDFKE 120
           RWAALRKL++QFL+ + N +E  HTKKQILS+GAGFDTTYFQLQ+EG AP LYVELDFKE
Sbjct: 61  RWAALRKLMYQFLDCEMNGDEKGHTKKQILSIGAGFDTTYFQLQDEGKAPSLYVELDFKE 120

Query: 121 VTTKKAAIIEACSQLREKLSGTVSISQEKGEVHSDHYKLLPVDLRDIDKLNDVLAIAGMD 180
           VT+KKAAIIE+ SQLREK+  + SISQEKGEV S+HYKLLPVDLRDI KL++++ +  MD
Sbjct: 121 VTSKKAAIIES-SQLREKVGASASISQEKGEVFSEHYKLLPVDLRDIQKLDEIITLTNMD 180

Query: 181 PSLPTFIIAECVLIYVDPDLSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESR 240
           PSLPTFIIAECVLIY+DPD ++AIVGW SK FSTA+FFLYEQIHP+DAFGQQMIRNLESR
Sbjct: 181 PSLPTFIIAECVLIYLDPDSTRAIVGWTSKTFSTAVFFLYEQIHPNDAFGQQMIRNLESR 240

Query: 241 GCALLGINATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDEFEE 300
           GCALLGI ATPTLLAK+KLFLDQGWQ A AWDML+VY++ IEAQERRRIERLELFDEFEE
Sbjct: 241 GCALLGIYATPTLLAKEKLFLDQGWQRAVAWDMLRVYSDFIEAQERRRIERLELFDEFEE 300

Query: 301 WYMMQEHYCVAYAINDSLGLFGNFGFP 326
           W+MMQEHYCV +AIND++GLFGN GFP
Sbjct: 301 WHMMQEHYCVTFAINDAMGLFGNLGFP 326

[Close]

BLAST of CmoCh17G004920 vs. TrEMBL
Match: M5X0H3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007914mg PE=4 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 2.0e-150
Identity = 264/329 (80.24%), Postives = 294/329 (89.36%), Query Frame = 1


Query: 1   MAKAAPDSQSNSAAVQATNDDASASKLSCVRKGYMKDDFIHLFVRRPVKRSPIINRGYFA 60
           MAK   DS SN  AVQATNDDASASKLSCV+KGYMKDD++HLFVRRPV+RSPIINRGYFA
Sbjct: 1   MAKPVSDSHSNREAVQATNDDASASKLSCVKKGYMKDDYVHLFVRRPVRRSPIINRGYFA 60

Query: 61  RWAALRKLLFQFLNVDSNTEE--HTKKQILSLGAGFDTTYFQLQNEGNAPHLYVELDFKE 120
           RWAALRKLL QFL+ +    E  H KKQ+LSLGAGFDTTYFQLQ+EG APHLYVELDFKE
Sbjct: 61  RWAALRKLLNQFLDTEKIGGEKGHLKKQVLSLGAGFDTTYFQLQDEGKAPHLYVELDFKE 120

Query: 121 VTTKKAAIIEACSQLREKLSGTVSISQEKGEVHSDHYKLLPVDLRDIDKLNDVLAIAGMD 180
           VT+KK  +IE CS L++K+S T SIS+EKGEV SDHYKLLP+DLR+I +L+DV+A+AGMD
Sbjct: 121 VTSKKTTLIETCSHLKDKISATASISREKGEVLSDHYKLLPIDLRNIQQLDDVIALAGMD 180

Query: 181 PSLPTFIIAECVLIYVDPDLSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESR 240
            SLPTFIIAECVLIY+DPD S+AIVGW SKAFSTAIFFLYEQIHPDDAFGQQMIRNLESR
Sbjct: 181 RSLPTFIIAECVLIYLDPDSSRAIVGWTSKAFSTAIFFLYEQIHPDDAFGQQMIRNLESR 240

Query: 241 GCALLGINATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDEFEE 300
           GCALLGI+ TPTL AK+ LFLDQGWQ A AWDMLKVY+N +EAQERRRIERLELFDEFEE
Sbjct: 241 GCALLGIHDTPTLQAKENLFLDQGWQRAVAWDMLKVYSNFVEAQERRRIERLELFDEFEE 300

Query: 301 WYMMQEHYCVAYAINDSLGLFGNFGFPRD 328
           WYMMQEHYCVAYAIND++GLF +FGFP +
Sbjct: 301 WYMMQEHYCVAYAINDAMGLFEDFGFPNN 329

[Close]

BLAST of CmoCh17G004920 vs. TAIR10
Match: AT1G02100.3 (AT1G02100.3 Leucine carboxyl methyltransferase)

HSP 1 Score: 500.0 bits (1286), Expect = 1.2e-141
Identity = 241/321 (75.08%), Postives = 283/321 (88.16%), Query Frame = 1


Query: 7   DSQSNSAAVQATNDDASASKLSCVRKGYMKDDFIHLFVRRPVKRSPIINRGYFARWAALR 66
           +S+SN AAVQATNDDASASKLSCV+KGYMKDD++HLFV+RPV+RSPIINRGYF+RWAA R
Sbjct: 3   ESRSNRAAVQATNDDASASKLSCVKKGYMKDDYVHLFVKRPVRRSPIINRGYFSRWAAFR 62

Query: 67  KLLFQFLNVDSNTEEHTKKQILSLGAGFDTTYFQLQNEGNAPHLYVELDFKEVTTKKAAI 126
           KL+ QFL   +++    KKQILSLGAGFDTTYFQL +EGN P+LYVELDFKEVT+KKAA+
Sbjct: 63  KLMSQFLLSGTSS----KKQILSLGAGFDTTYFQLLDEGNGPNLYVELDFKEVTSKKAAV 122

Query: 127 IEACSQLREKLSGTVSISQEKGEVHSDHYKLLPVDLRDIDKLNDVLAIAGMDPSLPTFII 186
           I+  SQLR+KL    SIS ++G+V SDHYKLLPVDLRDI KL DV++ A MD SLPTFII
Sbjct: 123 IQNSSQLRDKLGANASISIDEGQVLSDHYKLLPVDLRDIPKLRDVISFADMDLSLPTFII 182

Query: 187 AECVLIYVDPDLSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESRGCALLGIN 246
           AECVLIY+DPD S+AIV W+SK FSTA+FFLYEQIHPDDAFG QMIRNLESRGCALL I+
Sbjct: 183 AECVLIYLDPDSSRAIVNWSSKTFSTAVFFLYEQIHPDDAFGHQMIRNLESRGCALLSID 242

Query: 247 ATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDEFEEWYMMQEHY 306
           A+PTLLAK++LFLD GWQ A AWDMLKVY + ++ QE+RRIERLELFDEFEEW+MMQEHY
Sbjct: 243 ASPTLLAKERLFLDNGWQRAVAWDMLKVYGSFVDTQEKRRIERLELFDEFEEWHMMQEHY 302

Query: 307 CVAYAINDSLGLFGNFGFPRD 328
           CV YA+ND++G+FG+FGF R+
Sbjct: 303 CVTYAVNDAMGIFGDFGFTRE 319

[Close]

BLAST of CmoCh17G004920 vs. NCBI nr
Match: gi|659119671|ref|XP_008459781.1| (PREDICTED: tRNA wybutosine-synthesizing protein 4 [Cucumis melo])

HSP 1 Score: 634.0 bits (1634), Expect = 1.5e-178
Identity = 310/335 (92.54%), Postives = 327/335 (97.61%), Query Frame = 1


Query: 1   MAKAAPDSQSNSAAVQATNDDASASKLSCVRKGYMKDDFIHLFVRRPVKRSPIINRGYFA 60
           MAKAAPDSQSN AAVQATNDDASASKLSCVRKGYMKDD+IHLFVR+PVKRSPIINRGYF+
Sbjct: 1   MAKAAPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRKPVKRSPIINRGYFS 60

Query: 61  RWAALRKLLFQFLNVDSNTEEHTKKQILSLGAGFDTTYFQLQNEGNAPHLYVELDFKEVT 120
           RWAALRKLLFQFLNV SNTEEHTKKQILSLGAGFDTTYFQLQNEGNAPHLYVELDFKEVT
Sbjct: 61  RWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQLQNEGNAPHLYVELDFKEVT 120

Query: 121 TKKAAIIEACSQLREKLSGTVSISQEKGEVHSDHYKLLPVDLRDIDKLNDVLAIAGMDPS 180
           +KKAAIIE+CSQLREK+SGT+SIS EKGE+HSDHYKLLPVDLRDI++LNDVL +AGMDPS
Sbjct: 121 SKKAAIIESCSQLREKISGTISISLEKGEIHSDHYKLLPVDLRDINQLNDVLVLAGMDPS 180

Query: 181 LPTFIIAECVLIYVDPDLSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESRGC 240
           LPTFIIAECVLIY+DPD SQAIVGWASKAFSTAIFFLYEQIHP+DAFGQQMIRNLESRGC
Sbjct: 181 LPTFIIAECVLIYLDPDSSQAIVGWASKAFSTAIFFLYEQIHPNDAFGQQMIRNLESRGC 240

Query: 241 ALLGINATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDEFEEWY 300
           ALLGINATP+LLAKK LFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDEFEEW+
Sbjct: 241 ALLGINATPSLLAKKNLFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDEFEEWH 300

Query: 301 MMQEHYCVAYAINDSLGLFGNFGFPRDPNALDPPS 336
           MMQEHYCVAYAINDSLGLFGNFGFP+D + LDPPS
Sbjct: 301 MMQEHYCVAYAINDSLGLFGNFGFPQDQHVLDPPS 335

[Close]

BLAST of CmoCh17G004920 vs. NCBI nr
Match: gi|449445505|ref|XP_004140513.1| (PREDICTED: tRNA wybutosine-synthesizing protein 4 [Cucumis sativus])

HSP 1 Score: 626.3 bits (1614), Expect = 3.1e-176
Identity = 311/338 (92.01%), Postives = 325/338 (96.15%), Query Frame = 1


Query: 1   MAKAAPDSQSNSAAVQATNDDASASKLSCVRKGYMKDDFIHLFVRRPVKRSPIINRGYFA 60
           MAKAAPDSQSN AAVQATNDDASASKLSCVRKGYMKDD+IHLFVR+PVKRSPIINRGYFA
Sbjct: 1   MAKAAPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRKPVKRSPIINRGYFA 60

Query: 61  RWAALRKLLFQFLNVDSNTEEHTKKQILSLGAGFDTTYFQLQNEGNAPHLYVELDFKEVT 120
           RWAALRKLLFQFLNV SNTEEHTKKQILSLGAGFDT YFQLQNEGNAPHLYVELDF EVT
Sbjct: 61  RWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTMYFQLQNEGNAPHLYVELDFLEVT 120

Query: 121 TKKAAIIEACSQLREKLSGTVSISQEKGEVHSDHYKLLPVDLRDIDKLNDVLAIAGMDPS 180
           +KKAAIIE+CSQLREK+SGTVSIS EKGEVHSDHYKLLPVDLR+ ++LNDVL +AGMDPS
Sbjct: 121 SKKAAIIESCSQLREKISGTVSISLEKGEVHSDHYKLLPVDLRETNQLNDVLVLAGMDPS 180

Query: 181 LPTFIIAECVLIYVDPDLSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESRGC 240
           LPTFIIAECVLIY+DPD SQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESRGC
Sbjct: 181 LPTFIIAECVLIYLDPDSSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESRGC 240

Query: 241 ALLGINATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDEFEEWY 300
           ALLGINATP+LLAKK LFLDQGWQTAAAWDMLKVY NLIEAQERRRIERLELFDEFEEW+
Sbjct: 241 ALLGINATPSLLAKKNLFLDQGWQTAAAWDMLKVYRNLIEAQERRRIERLELFDEFEEWH 300

Query: 301 MMQEHYCVAYAINDSLGLFGNFGFPRDPNALDPP-SPA 338
           MMQEHYCVAYAINDSLGLFGNFGFP+D + LDPP SPA
Sbjct: 301 MMQEHYCVAYAINDSLGLFGNFGFPQDQHVLDPPLSPA 338

[Close]

BLAST of CmoCh17G004920 vs. NCBI nr
Match: gi|700191300|gb|KGN46504.1| (hypothetical protein Csa_6G104610 [Cucumis sativus])

HSP 1 Score: 564.7 bits (1454), Expect = 1.1e-157
Identity = 281/303 (92.74%), Postives = 293/303 (96.70%), Query Frame = 1


Query: 1   MAKAAPDSQSNSAAVQATNDDASASKLSCVRKGYMKDDFIHLFVRRPVKRSPIINRGYFA 60
           MAKAAPDSQSN AAVQATNDDASASKLSCVRKGYMKDD+IHLFVR+PVKRSPIINRGYFA
Sbjct: 1   MAKAAPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRKPVKRSPIINRGYFA 60

Query: 61  RWAALRKLLFQFLNVDSNTEEHTKKQILSLGAGFDTTYFQLQNEGNAPHLYVELDFKEVT 120
           RWAALRKLLFQFLNV SNTEEHTKKQILSLGAGFDT YFQLQNEGNAPHLYVELDF EVT
Sbjct: 61  RWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTMYFQLQNEGNAPHLYVELDFLEVT 120

Query: 121 TKKAAIIEACSQLREKLSGTVSISQEKGEVHSDHYKLLPVDLRDIDKLNDVLAIAGMDPS 180
           +KKAAIIE+CSQLREK+SGTVSIS EKGEVHSDHYKLLPVDLR+ ++LNDVL +AGMDPS
Sbjct: 121 SKKAAIIESCSQLREKISGTVSISLEKGEVHSDHYKLLPVDLRETNQLNDVLVLAGMDPS 180

Query: 181 LPTFIIAECVLIYVDPDLSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESRGC 240
           LPTFIIAECVLIY+DPD SQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESRGC
Sbjct: 181 LPTFIIAECVLIYLDPDSSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESRGC 240

Query: 241 ALLGINATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDEFEEWY 300
           ALLGINATP+LLAKK LFLDQGWQTAAAWDMLKVY NLIEAQERRRIERLELFDEFEEW+
Sbjct: 241 ALLGINATPSLLAKKNLFLDQGWQTAAAWDMLKVYRNLIEAQERRRIERLELFDEFEEWH 300

Query: 301 MMQ 304
           MMQ
Sbjct: 301 MMQ 303

[Close]

BLAST of CmoCh17G004920 vs. NCBI nr
Match: gi|225453390|ref|XP_002271322.1| (PREDICTED: tRNA wybutosine-synthesizing protein 4 [Vitis vinifera])

HSP 1 Score: 552.0 bits (1421), Expect = 7.3e-154
Identity = 269/339 (79.35%), Postives = 303/339 (89.38%), Query Frame = 1


Query: 1   MAKAAPDSQSNSAAVQATNDDASASKLSCVRKGYMKDDFIHLFVRRPVKRSPIINRGYFA 60
           MA    DS SN AAVQATNDDASASKLSC++KGYMKDD+IHLFVRRPV+RSPIINRGYFA
Sbjct: 1   MANTMADSHSNRAAVQATNDDASASKLSCIKKGYMKDDYIHLFVRRPVRRSPIINRGYFA 60

Query: 61  RWAALRKLLFQFLNVDSNTEE--HTKKQILSLGAGFDTTYFQLQNEGNAPHLYVELDFKE 120
           RWAALRKLL+QFL+ + + +E  H KKQILSLGAGFDTTYFQLQ+EG AP++YVELDFKE
Sbjct: 61  RWAALRKLLYQFLSCERDAKEQGHAKKQILSLGAGFDTTYFQLQDEGKAPYIYVELDFKE 120

Query: 121 VTTKKAAIIEACSQLREKLSGTVSISQEKGEVHSDHYKLLPVDLRDIDKLNDVLAIAGMD 180
           VT+KKAAIIE CSQLR+K+  T SIS+EKGEV SDHYKLLPVDLRDI KL+DV+A+A MD
Sbjct: 121 VTSKKAAIIETCSQLRDKVGATASISREKGEVLSDHYKLLPVDLRDIQKLDDVIAMANMD 180

Query: 181 PSLPTFIIAECVLIYVDPDLSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESR 240
           PSLPTFIIAECVLIY+DPD S+ IV WASK FSTA+FFLYEQIHPDDAFGQQMIRNLESR
Sbjct: 181 PSLPTFIIAECVLIYLDPDSSRGIVAWASKKFSTAVFFLYEQIHPDDAFGQQMIRNLESR 240

Query: 241 GCALLGINATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDEFEE 300
           GCALLGI  TPTLLAK+KLFLDQGWQ A AWDML++Y+N ++AQERRRIERLELFDEFEE
Sbjct: 241 GCALLGIYETPTLLAKEKLFLDQGWQRAVAWDMLRIYSNFVDAQERRRIERLELFDEFEE 300

Query: 301 WYMMQEHYCVAYAINDSLGLFGNFGFPRDPNALDPPSPA 338
           W+MMQEHYCVAYAIND++GL G+FGFP+D +    PS A
Sbjct: 301 WHMMQEHYCVAYAINDAMGLLGDFGFPKDDHVPCSPSAA 339

[Close]

BLAST of CmoCh17G004920 vs. NCBI nr
Match: gi|297734612|emb|CBI16663.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 550.4 bits (1417), Expect = 2.1e-153
Identity = 267/333 (80.18%), Postives = 301/333 (90.39%), Query Frame = 1


Query: 7   DSQSNSAAVQATNDDASASKLSCVRKGYMKDDFIHLFVRRPVKRSPIINRGYFARWAALR 66
           DS SN AAVQATNDDASASKLSC++KGYMKDD+IHLFVRRPV+RSPIINRGYFARWAALR
Sbjct: 3   DSHSNRAAVQATNDDASASKLSCIKKGYMKDDYIHLFVRRPVRRSPIINRGYFARWAALR 62

Query: 67  KLLFQFLNVDSNTEE--HTKKQILSLGAGFDTTYFQLQNEGNAPHLYVELDFKEVTTKKA 126
           KLL+QFL+ + + +E  H KKQILSLGAGFDTTYFQLQ+EG AP++YVELDFKEVT+KKA
Sbjct: 63  KLLYQFLSCERDAKEQGHAKKQILSLGAGFDTTYFQLQDEGKAPYIYVELDFKEVTSKKA 122

Query: 127 AIIEACSQLREKLSGTVSISQEKGEVHSDHYKLLPVDLRDIDKLNDVLAIAGMDPSLPTF 186
           AIIE CSQLR+K+  T SIS+EKGEV SDHYKLLPVDLRDI KL+DV+A+A MDPSLPTF
Sbjct: 123 AIIETCSQLRDKVGATASISREKGEVLSDHYKLLPVDLRDIQKLDDVIAMANMDPSLPTF 182

Query: 187 IIAECVLIYVDPDLSQAIVGWASKAFSTAIFFLYEQIHPDDAFGQQMIRNLESRGCALLG 246
           IIAECVLIY+DPD S+ IV WASK FSTA+FFLYEQIHPDDAFGQQMIRNLESRGCALLG
Sbjct: 183 IIAECVLIYLDPDSSRGIVAWASKKFSTAVFFLYEQIHPDDAFGQQMIRNLESRGCALLG 242

Query: 247 INATPTLLAKKKLFLDQGWQTAAAWDMLKVYNNLIEAQERRRIERLELFDEFEEWYMMQE 306
           I  TPTLLAK+KLFLDQGWQ A AWDML++Y+N ++AQERRRIERLELFDEFEEW+MMQE
Sbjct: 243 IYETPTLLAKEKLFLDQGWQRAVAWDMLRIYSNFVDAQERRRIERLELFDEFEEWHMMQE 302

Query: 307 HYCVAYAINDSLGLFGNFGFPRDPNALDPPSPA 338
           HYCVAYAIND++GL G+FGFP+D +    PS A
Sbjct: 303 HYCVAYAINDAMGLLGDFGFPKDDHVPCSPSAA 335

The following BLAST results are available for this feature:

BLAST of CmoCh17G004920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TYW4_MOUSE	9.8e-58	37.84	tRNA wybutosine-synthesizing protein 4 OS=Mus musculus GN=Lcmt2 PE=2 SV=4	[more]
TYW4_RAT	7.0e-56	39.22	tRNA wybutosine-synthesizing protein 4 OS=Rattus norvegicus GN=Lcmt2 PE=2 SV=1	[more]
TYW4_HUMAN	1.7e-54	36.36	tRNA wybutosine-synthesizing protein 4 OS=Homo sapiens GN=LCMT2 PE=1 SV=3	[more]
LCMT1_HUMAN	1.2e-50	38.73	Leucine carboxyl methyltransferase 1 OS=Homo sapiens GN=LCMT1 PE=1 SV=2	[more]
LCMT1_RAT	6.4e-49	36.94	Leucine carboxyl methyltransferase 1 OS=Rattus norvegicus GN=Lcmt1 PE=2 SV=1	[more]

BLAST of CmoCh17G004920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCH5_CUCSA	7.6e-158	92.74	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G104610 PE=4 SV=1	[more]
D7SLY5_VITVI	1.5e-153	80.18	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g01560 PE=4 SV=...	[more]
A0A061DUQ6_THECC	1.2e-150	78.17	Leucine carboxyl methyltransferase isoform 1 OS=Theobroma cacao GN=TCM_005709 PE...	[more]
B9RCZ7_RICCO	1.2e-150	80.73	Leucine carboxyl methyltransferase, putative OS=Ricinus communis GN=RCOM_1608280...	[more]
M5X0H3_PRUPE	2.0e-150	80.24	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007914mg PE=4 SV=1	[more]

BLAST of CmoCh17G004920 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02100.3	1.2e-141	75.08	Leucine carboxyl methyltransferase	[more]

BLAST of CmoCh17G004920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119671\|ref\|XP_008459781.1\|	1.5e-178	92.54	PREDICTED: tRNA wybutosine-synthesizing protein 4 [Cucumis melo]	[more]
gi\|449445505\|ref\|XP_004140513.1\|	3.1e-176	92.01	PREDICTED: tRNA wybutosine-synthesizing protein 4 [Cucumis sativus]	[more]
gi\|700191300\|gb\|KGN46504.1\|	1.1e-157	92.74	hypothetical protein Csa_6G104610 [Cucumis sativus]	[more]
gi\|225453390\|ref\|XP_002271322.1\|	7.3e-154	79.35	PREDICTED: tRNA wybutosine-synthesizing protein 4 [Vitis vinifera]	[more]
gi\|297734612\|emb\|CBI16663.3\|	2.1e-153	80.18	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007213	Ppm1/Ppm2/Tcmp
IPR016651	Leu_CO_MeTrfase_LCMT1

Vocabulary: **Molecular Function**
Term	Definition
GO:0008168	methyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0032259	methylation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0048573	photoperiodism, flowering
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008168	methyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G004920.1	CmoCh17G004920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007213	Methyltransferase Ppm1/Ppm2/Tcmp	PANTHER	PTHR13600	LEUCINE CARBOXYL METHYLTRANSFERASE	coord: 8..333 score: 7.1E
IPR007213	Methyltransferase Ppm1/Ppm2/Tcmp	PFAM	PF04072	LCM	coord: 14..205 score: 7.1
IPR016651	Leucine carboxyl methyltransferase 1, LCMT1	PIR	PIRSF016305	LCMT	coord: 1..327 score: 4.3E
None	No IPR available	PANTHER	PTHR13600:SF6	TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 4	coord: 8..333 score: 7.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G004920	Cucsa.121130	Cucumber (Gy14) v1	cgycmoB0293
CmoCh17G004920	CmaCh17G005210	Cucurbita maxima (Rimu)	cmacmoB353
CmoCh17G004920	CmaCh08G001450	Cucurbita maxima (Rimu)	cmacmoB889
CmoCh17G004920	Cla006715	Watermelon (97103) v1	cmowmB346
CmoCh17G004920	Csa6G104610	Cucumber (Chinese Long) v2	cmocuB362
CmoCh17G004920	MELO3C022277	Melon (DHL92) v3.5.1	cmomeB306
CmoCh17G004920	ClCG06G002510	Watermelon (Charleston Gray)	cmowcgB325
CmoCh17G004920	CSPI06G08230	Wild cucumber (PI 183967)	cmocpiB365
CmoCh17G004920	Lsi09G016830	Bottle gourd (USVL1VR-Ls)	cmolsiB320
CmoCh17G004920	Cp4.1LG12g04440	Cucurbita pepo (Zucchini)	cmocpeB335
CmoCh17G004920	Cp4.1LG17g10440	Cucurbita pepo (Zucchini)	cmocpeB344
CmoCh17G004920	MELO3C022277.2	Melon (DHL92) v3.6.1	cmomedB351
CmoCh17G004920	CsaV3_6G008610	Cucumber (Chinese Long) v3	cmocucB0437
CmoCh17G004920	Cla97C06G111880	Watermelon (97103) v2	cmowmbB361
CmoCh17G004920	Bhi12G001979	Wax gourd	cmowgoB0455
CmoCh17G004920	CsGy6G008310	Cucumber (Gy14) v2	cgybcmoB737
CmoCh17G004920	Carg26731	Silver-seed gourd	carcmoB0188
CmoCh17G004920	Carg04972	Silver-seed gourd	carcmoB0113

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh17G004920	CmoCh08G001460	Cucurbita moschata (Rifu)	cmocmoB313

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G004920	Cucumber (Gy14) v1	cgycmoB0292