CmoCh17G004610 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh17G004610
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionNADH-ubiquinone oxidoreductase chain 5 (1.6.5.3)
LocationCmo_Chr17 : 3244058 .. 3254149 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTTTACTTGCGGCATCTCTAACTATTCGGTTAGCGTCTTTCACTTAATGAATCACGCATTTTTCAAAGCATTACTATTCCAGAGTGCAGGTTCGGTGATTCGTGCCATGTCAAATGAGCAAGATATGCGGATGATAGGGGGGCTTGCCTCCTCGTTCCCTTTTACCTATGCCATGATGCTCATGGGCAGCTTATCTCTAATTGAATTTTCTTTTCTAACTGGATTTTATTCCAAAGATGTGATCTTAGAGCTCACTTACACTAAGTATACCATCAGTGGGAACTTTTCTTTCCGGTTGGGAAGTGTCTCTGTCCTTTTCACCTCTTATTACTCTTTTCGTTTACTTTTTCTAACATTTCTAGTACCAACTAATTCATTCGAGCGAGACATCGTAAGATGTCATGATGTGCCCATTCCTATGGCCATTCCTTTAATCCTTCTGGTTCTCGAGAGTCTCTTTGTAGGATACTTGGCCAAAGTGTGACCCGTTAGCCTATAAGTCAGTACTGTGATGAAGCGGCTCTTGCTCACCCAACACGATCGTACGAGGTCACAATTACCCCACCATGATCATTAGTGGTGAGCAAGAATTGAGGATCGGATGAGGGTGAAATTCTCGCCAATGGCTGAGATGTTCAGTCGACTCCCTCCCCCTTTGTGAGGGTCTGACCCTACGAGTGAGTAGAAAAGGGAGGAGGAAAGAGGCCCTGGAAAACTGTCATAATTAGTGAACAAGTATAAGCTTTGCTGCCCGACAGTATGGAGTACTGACCACACCGATGGACAAGCTCTGAAGCGAAGGACAAGAACGAGCGGAATCAATGTGTTCAAATTTCTGGCCTTGCACTGATCATCTAATGGACCATGGACTAAACGACGGCTACCTGAAAGGACTATGTCCAGGGGACCGCCGTCCCCCACACACAAGGTACATCTTGCACCTATGGGCTGCTATAACTATTCAAGAAGACACTCGAAACTGGAAGGATAAAAAACCCACCCGGTGGACTGCCGAGCTACAAATCCCACGTCACAGGAGCGAGATTCTCTAAAACGCCAAGGTCACAGGTGGCCAAGAGGGCCCACTTGGAGACTTGGGATCTCAGCAGGAAATGCGAAGGTTGCAACAATGAAAGCCGGCCGGCCAATAAGCGAAACGGAATCTGCTAGTTGAGTTCTGATTTGAGTAGGCTGATAACAGGGAATACTCTAACCTAGGAATCGGACTGTGGCTATACCGAGCCCCATCTTTTTTGGTTGGGCTCGTCAATTTGTATCTAACGAGATCAACAAAATTCTTAACGAACTAGTTTCATAACATAATTTTTATTATGTCTTCAAGTACTTGGTTCTAAAAACGAAGAAAGAAGAGAGTGGGTTTCCTCTTCTTCTTGTGTAAGTAAAGAATGAACAACAACCTTAAATGTATTTAAAGTAGGTCCACTAGAACGTGGGAAATTCAAAAGGACGACAACTATCTTATTCGATCATGAACGGGTTGGTCTAAAAAATCTTCCTTGAGGAGAGAGTGGAAACATATATAGCCTTGGCCTATGAATTTCTTAATCTCGGGTCAGCCAAAGCGGCCCCTTCAAATCGGTAAGTATTCTAGTGAGTCTACCTAGTGCAGTGCGAGCTAGAAGGATCTTTAGAGAAATACTTGATTGAGGTTTAGCACATATGTTTTCATATTGGGTTTCAAACCTTATTCACTGGCCTTATAAGAGCTCCCTCGATCTTATGCTCACCATGTCCCTTGTAGTAGGTGCTTTTTCTTTTTGGGCACTGGTACCCCAAGCCATTCTCGAAGTGGACCCGACCGCTGTCCATGATCCCAACAAAGCTACAATGCGTAAAGAAACCCAACTCGATAGCCCTAACTTCGTTGCCCGAAGGATATATATCACTCTGACCAAGAACATACGGAAAGAATATCATGAGCTGATAGGGGATCAACATATCGAGGATCCTCGGACTGAAGTAAGGAAGTGAGCATTTGCGTACACTTTAACTTCGATAAACATTGGTTTAATGCAAGATTCGGTGTGTACTTCCCAACTACATATAGGCCATATAGAAAAGGAGGAACAATGGTCTAATCTAAGAGCAAATCGGTTATTACCTTGTTACGTGAGGAATATCCTTGATGCAAAAACAGAATGCAAAATAGAATCATAAAAACATAAGAACATGAAAGAAAAACTCAATTAAGTTTAGATCAAGAGAAAGAAGAGAAAGAAAAGAAAGAAAAGAGACCAATAGAATAGGTTAAATCATGGACACGATTGAATATGATCCCTTATTTTTAGTTAACCATTTTATTTTTTGTTAGGTAACTATTTTTATCTAACATCCCTACCGAGTGAATGTTATCCTTGATTTTTAGTTAACCATTTTTTGTTAGGTAACTATTCTTACGTTATACTCACACAATTGAAGTAAGTGAGAAGTACAGGTCGAGTGGAAGAGCGTTCGTTAAGTTGCCATTTACTTTTCTATTTTTAGGATAATTTGTTATTTAAATATCCCAATTGAATGAGAAATGAGATCATCAAGTCTTCAGTCAAATATTCTCTCTCCTTTGTTTTCCGTTATTTTTTTTCTTCGAAGAAGTTTTCCTTCGGCCATTTCTTTCTCTGTCGACGTTTTCCTTTCAATTGTCAAAAGTCAACAAGTGGTATCAAAGCCTGGTTTAATCCACCGTTTGGTAGGTTATGGAGTCTGCTCTCTTATTTATAGCTTGGTAAAGCTATATATGGTAAAGCTATATTTGGTACAGCTATATATGGTAAAGCTATATATAGTAAAGCTATATCCGGTAAAGCTATATATGGTAAATAGCTATATATAGTAGATGGTTAAATCTGGTAAAGCTATATATAGTAAACTGAACCATATATATATATATATATATATCCCGTAGAACTTTGAAAATGTACTTTCAATTCTCTATAATTCTCTCTTACTGTACATACGTGAAGTCATCAATAAAAAAATCCTTTTAGCCAGAGTTCTCCTTGCACTTTTCTCTATCCTGTTCTTTGTATTCATCTAGATCGAGCGTGTGCATTGTTGTGCGATCATAACAACTGGTATTAGAGCTAGGTGAAATTCACCACGATCTGTGAAGGTGAAAAGTTCAAAGATTGGAATTGAGAAGTTCGATGGATCCGATTTCGGTTTCTGGAAGATGCAGATTGAAGATTATCTGTACCAGAAAGATCTTCACGAACCTCTGTTGGGGGTGAAGCCGGATACCATGACCACGGAATAGTGGAAGCTCAAGGATCGACAAGCCTTAGAAATGATCTGATTGACGCTATCCAGAAACGTGGCGTTTAACATCATCAAGGAGAAGACAATGTCAGATCTGATGAAGGCACTGTCGAATATGTACGAAAAACCGTCGGCTATGAACAATGTGTATTTGATGTAGAGATTGTTCATTCTACAGATGTCTGAAGGTGGACCTATTATTGATCATATAAATGAATTCAATATGATCATAAGTCAACTAAGTTCGGTGAAAATTAATTTTGAAGATGAAATTAAAGCGTTGATTTTGATGTCATCCTTACCCAAGTCATGGGATACTGTTGTTACCGCAATCAATAGTTCCCGAGGATCTGATAAACTGAAGTTTGGTGAAATTCGAGATGTAGTTCTCAGCGAAAGTATTCGCAAATGAGAAACTGGAGATTCATCAGGCAATGCTCTTAGTGTTGATCAAAGGGGAAGAAGTAAATCAAAAAGCTTAAACAAACATGGGCGATCAAAATCAAAGAACCGGGGAAAATCTCTAAACAAACCCAACGTAACGTGTTGGAGCAGTGGGGGAAAATGACACTTTCGAACAGATTGTACAAAACCAAAGAGGAAGCAGAATCACATATCTGGAGATGATGATATTTCTATAAATTCAGCAGAAGACATTAGGGATGCTCTAATCCTCAATGTGGACAGTTTGATTGAATCTTGGATTTTGGATTTAGGTGCATCTTTTCATTCGTCGCCAAATAAAGAGTTGTTCCGGAATTTCAAGTCTGGAAATTTCGAGAAGGTGTATCTTGCCGACAACAAAGATTTGGAGATTAAAGGAAAAGAAGATGTCTGCATAAAAACTCCAACAGGAAATTAATGAACATTAAAGAATGTCAGATATATTCCTGGTCTAAAAAAGAACCTGATCTCTATTGGTCAGTTGGACAGCACAGGTTATGCAACAAAGTTAGGGAAGAGTTCGTGGAAGATTATGAAGGGTGCTACGGTGGTAGCACGTGGCTCAAAATCTGGAACCTTATACACCACTGCAGGGTGTATGAACATAGCTGTTATTGCTGAGAGTGCTTCAAATTCAAGTATACGGCACAATAGACTTGAACATATGAGCGCAAAAGGATTGAAGAGGCTGGCTGCGAAAGGAGTTTTAGAAAGTCTGAAATCTGTTGATGTGGGTCGTTGTGAGAACTACGTTATGAGCAAGCAGAAACGAGTTAGCTTCACAAGAACCACTAGATAATTGAAGAAAGTGTGGTTGGAAATGGAACCATATGTGGAGCAAGGTCGACGAAGCAAGTAGGAGTTGAGCCTGAGTTGCAGGAAAACTCACTTAGTGATGTTGTAGCAGATACTCATGAAACTCCTGAGACTACTGCTGAGGAACCAGATGTGGAGCAAGGTTCCAAGACCACGAAGCAAGTGGGACTTAAGCTTGAGTTGCAGGGAAACTCACCTAGTGATGTTGTAGCAGATACTCAAGAAACTCCTGAGACTACTGCTGAGGAGCCAGATGTGGAGCAAGGTTCCAAGACAACAAAGCAAGTGGGAGTTGAGGTTGAGTTGCGAAGAAAATCACCAAGTGATCTTGTAGCAGATACTCAACAAACTCCTGAGGTTGTTGCAGAGGATTCAGCAGTGGAGCAAGTGACACCTGAACTGGTGTTGAGAAGATCATCCTGTACTATCAGAGTACCAGATATGTATGTACCTTCATTACACTATCTGTTGCTGATGAAAGGGAACCACAACCCTTTGATGAGACCCTACAGTTGGAGGATACAACCAAGTAGGAGCAAGCCATGGATGATGGGACGTCTAGGCTTCAAAAATGCGTTGTACTAAGGCTGAGTACGTGGCAATAGTTGAAGCTGGAAAGAAGACGATATGGATGACTGACTATCTGGAAGAATGGCAAGAAGTAGCACGAAGATATTCTTTATAGAGATAGTTAGATTGTCATACAGTTGGTGAAGGAACCTGGTATATCATTTAAAGAGAAAACACAGAAGACGATATCATTTCACTTGCAGGTTAGTGAAAGATGATGATGTGTTTGGAGAAGATAAAGGGTGCAAAGAATCCAGCAAACATGTTGACAAAATGTGTTGATGTTGGAATATTGAGGTTGTGCAAAGCCTCAATTGATATGGTGCCATGAAGACCATGAAGATGCTCATGGTCATTTGAGAATGAAATTCTTGGTTGACTAGATCAGTCTCCAAGTGGGAGAATTGTTAGGTTATGGAGTCTGCTCTCTTATTTATAGCTTGGTCAACGGTTATATCCGGTAAAGCTATATTTGGTAAAGTTATATATGGTAAAGCTATATATAGTAAACCTATATTCGGTAAAGCTATCTATGGTAAATAGCTATATATATAGTAGATGGTTAAATCTGGTAAAGCTATATATAGTAAACTGAACCATATATATATCCCATCCGGTAGAGCATTGAAAATGTACTTTCAATTCTTTGTAATCCTCTCTTATTGTACATACGTGAAGTCATCAATAGAAAAATCCTTTTAGCCAAAGTTCTCCTTGCACTTTTCTCTATCCTATTCTTTGTGTTCATCTAGATCGAACGTGTGCTTTGTTGTGCGATCCTAACACGTTGGTATATCATTGCAGAGGAGCCGACTTTATCAATAGCCAAGTTGAATAGCTCAAGTGGTTAGCCGTTGATGACTTTTCAATGTGGATCACGGGGCTCGCCAACAGCATCACCACTCTTAGTGGGAGCATCAGCGAGACAGAAATTGTGAAGAAGACGCTGCAAGTCGTCCCCGATCACCTCGAGCAAGTCACCACTCTCGATGGGAGCATCAGTGAGACACAAATCGTGAAGAAGATGATGCAGATCGTCCCCGATCACCTCGAGAAAGTCGCGATTTCAATCGAGACATTACTTGACTTGAATGACCTAGAAATGGAAGAGGTGACCGAAAATCTTGCAGGCGCATGCGCGGGAAAGTGGCGGATCAAAAGAAGGAGTCGACTGATGAGGGGCCAATCCAGTGATCGAAATGTGGGAAGAGAGGTCACCTGAGTAAGAATTGCTAGAGCAAGCTCAGGAACAAGGAGACGGCCTTGAAGGCCCATGTGGCTCAATCCGAGGAGGACTTCGCTCAGATCAGCGAGAGGGACGAGCAACAAGAGCACCAACGATGGGTCCTCAACACAGGAGTGACAAACCATATGACCGGGACCAAGTCTGCGTTCTCCGAGCTCGACTCGGTGATTCGCGGGATGGTTAAGTTTGGCGACGGCTCCGTCGTCGAGATCGAAGGGTGTGGCACCATCCTGTTCATTGGAAAGGGAGGCGAGCACCACAAGCTGACCGACGTCTACTTCAGCCTGAGGCTCAACGCTAATCTTATGAGCCTGGGTCAACTCGATGAGGCCAGCTGCCAAATTTCCATTGTGTGCAAGCTACTAAAGATTCGCGATGATCGACGACGACTGCTCACACAAGTTCGATACATGACAAACCGTCTTTACATCCTAGAGTTGGAGATAGAGCTATCAGTCAGCCTCTCGGCTAGGATCGAAGAAGTATCTTGGAGGTGGCACGCAAGGTACGGACACCTAGACTTTCCTATTCTACAAAAATTGCATAAGGAGGAGATGGTGCATGGTTTGCTAGCAACCAAAGGCGTGAACAGGCTATGCGACGGGTGTCTCATTGGCAAGCAGAGACGCACCCCCTTTGCATCTCAGGCATCCTACCGCGCCAGTGAGCCATTGGAGCTCGTGCACGACGATATCTGTGGGCCCATCAAGGCGGTGACCCGAGGTGGCAAGACTCTCTTCCTCCTGCGGTCAATGACAAAAGCCGCTTCATGTGGTTGATCCTACTACAAGCGAAAAGTGAGACAGCAGAGAAATTAAGCGCATTCAAGCACGAGCGGAAGCCGAATGCTGGAAGAAGATACAGGTGTTGCACACGGACCGAGGCAGAGAATTCACCTCAGCGAGCTTCGATAAGTACTGCGACGAGCTAAGTATGCAGTGGCACCTAACGGCGCTCTACTCCCCCCAGCAGAACGGGGTGGTGAAACGCTAAAATCAGACCATCGTCGGGACAACAAGGTCATTATTGATGACGGCCGGGATGCCTGGGAGTTTCTGGGGAGAGGCGATAATAACGGCCGTCTACCTCCTCAATCGGTCACCAACGCGAAGCCTTGACTAGAAGACGCCATACGAGGCCTGGTACAACAAGAAGCCAGTGGTACGTCATCTCCGAGTGTTCGACTGCATCGCATACATGAAGGACATGCGTCCCCACCTCACCAAGCTCGATCCCAGGGGGCTGAAGGTCGTCTTCATCGGCTACGAAGCCGAAAACAAGGCGTACAGGTTCTATGATCCTACAGAGGGGTGAGCTCATGTGTCGCGCGACGTCATCTTTGACGAGACCACCTTTTGACAGTGGAACGACGTGACCGAGGCAGATCAAAACCCAAATCAATTCACGGTAAAGTACCTCGTCACCGAGCTGGGAGAAGGAGGAGCACAACATCGAGAATCGTCACCGCCACCAACAGCTGCACCGGGCATGCCTAGGCTAACCCCAACCATAACTCTAGCTGCAACCCCTAAACTAGTGGAGTTTGCAACACCACGTACTGCGGATTCGACGCTAGATATCGATCACGATGTTGATCTGGTGGCCAGGTACCGGAGGATGAAAGACCTACTGGGAAGAGGTGAACCACCTGGACTGGCGGCGCGCCAGCTCGCAGAAGAGATGGTCGAACAAGATGTGGAGTCTGGAGGACATGCCACCAAGGACACTGAGCCATAGGGCTTGAATCGGAGTGCAAACAAAATAAGGTAGATATACGATAGGGCTTTAGGAGGAGATTGTTAGATAAATCCCTATCGAGAGAATGTGATCCCTGATTTTTAGTTAACCATTTTTTGTTAGGTAACTATTTTTACGTTAAACCCACATAATTGAAGTAAATGGGAAGTACACGTCGAGTGGAAAGCGTTCGTTAAGTTGCCATTTACTTTTCTATCTTTAGGATAATTTGTTATTTAAATATCTCAACTGAATGATAAATGAGATCATCGAGTCTTTAGGCAAATATTCTCTCTCCTTTCTTTTCCGTTATTTTTTTTTTCTTCGAAGAAGTTTTCCTTCGGACATTTTTTCTCTGTCGACATTTTCCTCTCAATTGCCAGAAGTCAACAGTATTTTATATGCTCAATTGTAAACTCCAAGGACAGGAAAGAAAAGAGACCTTGTTTAGAGTGAAAGAAGTGCATTAGATTTGAATGTGTATAACATATATCTTTTCTTCCGAAGAAGAATAGGAAGAAAAAGAACGGACTAAAGCCTAATAAAGAAATGAGATAGTGAAACCCGAGTGAAATAAGGGATGGTAATAGAGTATAAGGTTTCAGTCAGGGAATAGAGGTTTAGGAGAAGCAGCTCACTTCACAGTAACCCAATCTCTATAGGTGAAAAAAAGTATTGAAGATAGAAGTTTAATCAGAGAAAATGAAAGAGAAAGAGGGAGGTAATAGAGTCAAAGGTTCAGGAAAGAAAAACGAACAAGAATAAGGAGAAAGAGAAGAAAAAGAGAAAGAAAAGATTTGAGACCTATAGCGATAGGAAAGAAAAGAGACTGTAAAAGTTCAGATTCAGGAGAAGTTAAGTTGGATGAATCTCCCCTCTCTCCAAATTCTTCTTTTCTGACTCTCATCTGCTTTTTCAGTTCAATTAGGTAAAGTAGAGTATAAGGGGAAGGATTGATTCTTATGAACCGAGCTCAAGCGATCTATTTTACTCTCCTATAAATTCTATTTGTTTAAAGCCTATTTACCGAGAAAAAGAAAAGAGAGGTGAACGAGTAAAGTCGAATTAATCCTTCCTTAAACCTTCCGAAACAGAATAAGGAGAAAGAGAAGAAAAAGAAAAGAAGCGAAGCCTATTTACCAAGTGAAAGAATAAAGAGGGAATAGAGTCTTTGGTGAAGGTCAGGTTAAATAAAGATTCCAGAGCAAAGCTACTCGACCAATAAAATAGACAGAGGATTTAAGTGACTCAACAGTATTTGTTCGTTTTGATTTAATTATGTTCTTCTGATTCTGTAAAGGTTTAGGAGTTTACCGAGTTTACAGTCTTTGAAGGAAAATCTTTGATTCGAGACGCTTTACCTCGTGAAAGAATAGTGAAACCCTAGTTCAAGAAGAATCGTTAGAAAGATAGAAAGGAAGCAAACAAAACAAGCTGCTACTAAATCTTTGAACTACCTTACTTATTAACCTGGCCTTACATCTTACGAGAATGATGATTTTATTACGAGACAAATTCTTCTTTTATGACAAGTATCTAAAAGGAATCAAAAGAGAAAGACGAAACAAATGAAAGAAAAACCATTCTCGAAGAAGCGTGACCAATAGAATAGGTTTCGGAAAGAAAAGATTCGAGACTGAGGTTAATGAGGTAACCCCTGCAACTTTACCTATTGATTCAAAGGTGAAGGAGAAAGAACCAAACCCCTCTTTCCTCGAATTAATAAGGAGTCTTTCCTTCCTTAAATCCTACTATCCTCTTTCAGTCTTTCCTTCCTTAAATAAACCTGACAAAAAAGAATAAAGAAGAAACGGACTAAAGCGAGGAGCGAAGCCACCTTGTTTACCGTGAGTGAAAGAATATGAGAGTAAGAGAAGAAGAATTTGGAGAGAGAAAGAACCTTTAACCTATTTATCAAGTTGACAAGGATTTTATTGACTTGATTAGGTAATCTCAGACCAGGGGAAGGAAGGAGCGAAGCAAGCAAACAAGAAATAG

mRNA sequence

ATGATCTTTACTTGCGGCATCTCTAACTATTCGGTTAGCGTCTTTCACTTAATGAATCACGCATTTTTCAAAGCATTACTATTCCAGAGTGCAGGTTCGGTGATTCGTGCCATGTCAAATGAGCAAGATATGCGGATGATAGGGGGGCTTGCCTCCTCGTTCCCTTTTACCTATGCCATGATGCTCATGGGCAGCTTATCTCTAATTGAATTTTCTTTTCTAACTGGATTTTATTCCAAAGATGTGATCTTAGAGCTCACTTACACTAAGTATACCATCAGTGGGAACTTTTCTTTCCGGTTGGGAAGTGTCTCTGTCCTTTTCACCTCTTATTACTCTTTTCGTTTACTTTTTCTAACATTTCTAGTACCAACTAATTCATTCGAGCGAGACATCGTAAGATGTCATGATGTGCCCATTCCTATGGCCATTCCTTTAATCCTTCTGGTTCTCGAGAGTCTCTTTGTAATCTCAGACCAGGGGAAGGAAGGAGCGAAGCAAGCAAACAAGAAATAG

Coding sequence (CDS)

ATGATCTTTACTTGCGGCATCTCTAACTATTCGGTTAGCGTCTTTCACTTAATGAATCACGCATTTTTCAAAGCATTACTATTCCAGAGTGCAGGTTCGGTGATTCGTGCCATGTCAAATGAGCAAGATATGCGGATGATAGGGGGGCTTGCCTCCTCGTTCCCTTTTACCTATGCCATGATGCTCATGGGCAGCTTATCTCTAATTGAATTTTCTTTTCTAACTGGATTTTATTCCAAAGATGTGATCTTAGAGCTCACTTACACTAAGTATACCATCAGTGGGAACTTTTCTTTCCGGTTGGGAAGTGTCTCTGTCCTTTTCACCTCTTATTACTCTTTTCGTTTACTTTTTCTAACATTTCTAGTACCAACTAATTCATTCGAGCGAGACATCGTAAGATGTCATGATGTGCCCATTCCTATGGCCATTCCTTTAATCCTTCTGGTTCTCGAGAGTCTCTTTGTAATCTCAGACCAGGGGAAGGAAGGAGCGAAGCAAGCAAACAAGAAATAG
Homology
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BLAST of CmoCh17G004610 vs. Swiss-Prot
Match: NU5M_OENBE (NADH-ubiquinone oxidoreductase chain 5 OS=Oenothera berteroana GN=ND5 PE=2 SV=2)

HSP 1 Score: 265.8 bits (678), Expect = 3.3e-70
Identity = 140/156 (89.74%), Postives = 144/156 (92.31%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAMSNEQDMRMIGGLASSFPFTYAM 60
           MIF CGISNYSVSVFHLMNHAFFKALLF SAGSVI AMS+EQDMR +GGLASSFPFTYAM
Sbjct: 322 MIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPFTYAM 381

Query: 61  MLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYYSFRLLFLT 120
           MLMGSLSLI F FLTGFYSKDVILEL YTKYTISGNF+F LGSVSVLFTSYYSFRLLFLT
Sbjct: 382 MLMGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRLLFLT 441

Query: 121 FLVPTNSFERDIVRCHDVPIPMAIPLILLVLESLFV 157
           FLVPTNSF RDI+RCHD PIPMAIPLILL L SLFV
Sbjct: 442 FLVPTNSFGRDILRCHDAPIPMAIPLILLALGSLFV 477

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BLAST of CmoCh17G004610 vs. Swiss-Prot
Match: NU5M_WHEAT (NADH-ubiquinone oxidoreductase chain 5 OS=Triticum aestivum GN=ND5 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.1e-68
Identity = 138/156 (88.46%), Postives = 142/156 (91.03%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAMSNEQDMRMIGGLASSFPFTYAM 60
           MIF CGISNYSVSVFHLMNHAFFKALLF SAGSVI AMS+EQDMR +GGLASSFP TYAM
Sbjct: 322 MIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPLTYAM 381

Query: 61  MLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYYSFRLLFLT 120
           MLMGSLSLI F FLTGFYSKDVILEL YTKYTISGNF+F LGSVSVLFTSYYSFRLLFLT
Sbjct: 382 MLMGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRLLFLT 441

Query: 121 FLVPTNSFERDIVRCHDVPIPMAIPLILLVLESLFV 157
           FLVPTNSF RD +RCHD PIPMAIPLILL L SLFV
Sbjct: 442 FLVPTNSFGRDRLRCHDAPIPMAIPLILLALGSLFV 477

[Close]
BLAST of CmoCh17G004610 vs. Swiss-Prot
Match: NU5M_ARATH (NADH-ubiquinone oxidoreductase chain 5 OS=Arabidopsis thaliana GN=ND5 PE=2 SV=3)

HSP 1 Score: 260.8 bits (665), Expect = 1.1e-68
Identity = 138/156 (88.46%), Postives = 142/156 (91.03%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAMSNEQDMRMIGGLASSFPFTYAM 60
           MIF CGISNYSVSVFHLMNHAFFKALLF SAGSVI AMS+EQDMR +GGLASSFP TYAM
Sbjct: 322 MIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPLTYAM 381

Query: 61  MLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYYSFRLLFLT 120
           ML+GSLSLI F FLTGFYSKDVILEL YTKYTISGNF+F LGSVSVLFTSYYSFRLLFLT
Sbjct: 382 MLIGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRLLFLT 441

Query: 121 FLVPTNSFERDIVRCHDVPIPMAIPLILLVLESLFV 157
           FLVPTNSF RDI RCHD PIPMAIPLILL L SLFV
Sbjct: 442 FLVPTNSFGRDISRCHDAPIPMAIPLILLALGSLFV 477

[Close]
BLAST of CmoCh17G004610 vs. Swiss-Prot
Match: NU5M_MARPO (NADH-ubiquinone oxidoreductase chain 5 OS=Marchantia polymorpha GN=ND5 PE=3 SV=2)

HSP 1 Score: 246.5 bits (628), Expect = 2.1e-64
Identity = 130/156 (83.33%), Postives = 137/156 (87.82%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAMSNEQDMRMIGGLASSFPFTYAM 60
           MIF CGISNYSVSVFHLMNHA FKALLF SAGSVI AMS+EQDMR +GGLAS  PFTYAM
Sbjct: 325 MIFACGISNYSVSVFHLMNHACFKALLFLSAGSVIHAMSDEQDMRKMGGLASLLPFTYAM 384

Query: 61  MLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYYSFRLLFLT 120
           ML+GSLSLI F FLTGFYSKDVILEL YTKYTISGNF+F LGSVSV FTSYYSFRLLFLT
Sbjct: 385 MLIGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVFFTSYYSFRLLFLT 444

Query: 121 FLVPTNSFERDIVRCHDVPIPMAIPLILLVLESLFV 157
           FL PTNSF+RD+ RCHD PI MAIPLILL   S+FV
Sbjct: 445 FLAPTNSFKRDLSRCHDAPILMAIPLILLAFGSIFV 480

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BLAST of CmoCh17G004610 vs. Swiss-Prot
Match: NU5M_PHYIN (NADH-ubiquinone oxidoreductase chain 5 OS=Phytophthora infestans GN=ND5 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 6.5e-42
Identity = 84/156 (53.85%), Postives = 115/156 (73.72%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAMSNEQDMRMIGGLASSFPFTYAM 60
           M F CG+SNY +++FHL NHA+FKALLF  +G+VI AM +EQD+R +GGL    PFTY M
Sbjct: 324 MFFACGLSNYPLAIFHLSNHAYFKALLFLCSGAVIHAMGDEQDIRKMGGLRRILPFTYIM 383

Query: 61  MLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYYSFRLLFLT 120
            L+GSLSL+ F FLTGFYSKD+ILE+ +  ++ +G+F++ LG++   FT++YS RLLF  
Sbjct: 384 FLIGSLSLMGFPFLTGFYSKDLILEVAFASFSETGHFAYWLGTIGAFFTAFYSTRLLFFA 443

Query: 121 FLVPTNSFERDIVRCHDVPIPMAIPLILLVLESLFV 157
           FL  TN+++  I   HDVP+ M IPL LL   S+F+
Sbjct: 444 FLSETNAYKNIIKNAHDVPLEMGIPLGLLAFGSIFI 479

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BLAST of CmoCh17G004610 vs. TrEMBL
Match: F8TCC3_KLAGA (NADH dehydrogenase subunit 5 (Fragment) OS=Klainedoxa gabonensis GN=nad5 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.3e-68
Identity = 141/156 (90.38%), Postives = 144/156 (92.31%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAMSNEQDMRMIGGLASSFPFTYAM 60
           MIF CGISNYSVSVFHLMNHAFFKALLF SAGSVI AMS+EQDMR +GGLASSFPFTYAM
Sbjct: 39  MIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPFTYAM 98

Query: 61  MLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYYSFRLLFLT 120
           MLMGSLSLI F FLTGFYSKDVILEL YTKYTISGNF+F LGSVSVLFTSYYSFR LFLT
Sbjct: 99  MLMGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRSLFLT 158

Query: 121 FLVPTNSFERDIVRCHDVPIPMAIPLILLVLESLFV 157
           FLVPTNSFERDIVRCHD PIPMAIPLILL L SLFV
Sbjct: 159 FLVPTNSFERDIVRCHDAPIPMAIPLILLALGSLFV 194

[Close]
BLAST of CmoCh17G004610 vs. TrEMBL
Match: F8TCB7_BYRCR (NADH dehydrogenase subunit 5 (Fragment) OS=Byrsonima crassifolia GN=nad5 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.7e-68
Identity = 141/156 (90.38%), Postives = 144/156 (92.31%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAMSNEQDMRMIGGLASSFPFTYAM 60
           MIF CGISNYSVSVFHLMNHAFFKALLF SAGSVI AMS+EQDMR +GGLASSFPFTYAM
Sbjct: 39  MIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPFTYAM 98

Query: 61  MLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYYSFRLLFLT 120
           MLMGSLSLI F FLTGFYSKDVILEL YTKYTISGNF+F LGSVSVLFTSYYSFRLLFLT
Sbjct: 99  MLMGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRLLFLT 158

Query: 121 FLVPTNSFERDIVRCHDVPIPMAIPLILLVLESLFV 157
           FLVPTNSF RDIVRCHD PIPMAIPLILL L SLFV
Sbjct: 159 FLVPTNSFGRDIVRCHDAPIPMAIPLILLALGSLFV 194

[Close]
BLAST of CmoCh17G004610 vs. TrEMBL
Match: A0A165EHK0_GOSRA (NADH dehydrogenase subunit 5 OS=Gossypium raimondii GN=nad5 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 3.7e-68
Identity = 140/156 (89.74%), Postives = 144/156 (92.31%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAMSNEQDMRMIGGLASSFPFTYAM 60
           MIF CGISNYSVSVFHLMNHAFFKALLF SAGSVI AMS+EQDMR +GGLASSFPFTYAM
Sbjct: 322 MIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPFTYAM 381

Query: 61  MLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYYSFRLLFLT 120
           MLMGSLSLI F FLTGFYSKDVILEL YTKYTISGNF+F LGSVSVLFTSYYSFRLLFLT
Sbjct: 382 MLMGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRLLFLT 441

Query: 121 FLVPTNSFERDIVRCHDVPIPMAIPLILLVLESLFV 157
           FLVPTNSF RDI+RCHD PIPMAIPLILL L SLFV
Sbjct: 442 FLVPTNSFGRDILRCHDAPIPMAIPLILLALGSLFV 477

[Close]
BLAST of CmoCh17G004610 vs. TrEMBL
Match: B0L4M4_9MAGN (NADH-ubiquinone oxidoreductase chain 5 (Fragment) OS=Daphniphyllum sp. Qiu 94162 GN=nad5 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 3.7e-68
Identity = 140/156 (89.74%), Postives = 144/156 (92.31%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAMSNEQDMRMIGGLASSFPFTYAM 60
           MIF CGISNYSVSVFHLMNHAFFKALLF SAGSVI AMS+EQDMR +GGLASSFPFTYAM
Sbjct: 241 MIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPFTYAM 300

Query: 61  MLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYYSFRLLFLT 120
           MLMGSLSLI F FLTGFYSKDVILEL YTKYTISGNF+F LGSVSVLFTSYYSFRLLFLT
Sbjct: 301 MLMGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRLLFLT 360

Query: 121 FLVPTNSFERDIVRCHDVPIPMAIPLILLVLESLFV 157
           FLVPTNSF RDI+RCHD PIPMAIPLILL L SLFV
Sbjct: 361 FLVPTNSFGRDILRCHDAPIPMAIPLILLALGSLFV 396

[Close]
BLAST of CmoCh17G004610 vs. TrEMBL
Match: D5I3C3_CITLA (NADH-ubiquinone oxidoreductase chain 5 OS=Citrullus lanatus GN=nad5 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 3.7e-68
Identity = 140/156 (89.74%), Postives = 144/156 (92.31%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAMSNEQDMRMIGGLASSFPFTYAM 60
           MIF CGISNYSVSVFHLMNHAFFKALLF SAGSVI AMS+EQDMR +GGLASSFPFTYAM
Sbjct: 322 MIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPFTYAM 381

Query: 61  MLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYYSFRLLFLT 120
           MLMGSLSLI F FLTGFYSKDVILEL YTKYTISGNF+F LGSVSVLFTSYYSFRLLFLT
Sbjct: 382 MLMGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRLLFLT 441

Query: 121 FLVPTNSFERDIVRCHDVPIPMAIPLILLVLESLFV 157
           FLVPTNSF RDI+RCHD PIPMAIPLILL L SLFV
Sbjct: 442 FLVPTNSFGRDILRCHDAPIPMAIPLILLALGSLFV 477

[Close]
BLAST of CmoCh17G004610 vs. TAIR10
Match: ATMG00060.1 (ATMG00060.1 NADH dehydrogenase subunit 5C)

HSP 1 Score: 260.8 bits (665), Expect = 6.0e-70
Identity = 138/156 (88.46%), Postives = 142/156 (91.03%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAMSNEQDMRMIGGLASSFPFTYAM 60
           MIF CGISNYSVSVFHLMNHAFFKALLF SAGSVI AMS+EQDMR +GGLASSFP TYAM
Sbjct: 322 MIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPLTYAM 381

Query: 61  MLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYYSFRLLFLT 120
           ML+GSLSLI F FLTGFYSKDVILEL YTKYTISGNF+F LGSVSVLFTSYYSFRLLFLT
Sbjct: 382 MLIGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRLLFLT 441

Query: 121 FLVPTNSFERDIVRCHDVPIPMAIPLILLVLESLFV 157
           FLVPTNSF RDI RCHD PIPMAIPLILL L SLFV
Sbjct: 442 FLVPTNSFGRDISRCHDAPIPMAIPLILLALGSLFV 477

[Close]
BLAST of CmoCh17G004610 vs. TAIR10
Match: ATMG00513.1 (ATMG00513.1 NADH dehydrogenase 5A)

HSP 1 Score: 260.8 bits (665), Expect = 6.0e-70
Identity = 138/156 (88.46%), Postives = 142/156 (91.03%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAMSNEQDMRMIGGLASSFPFTYAM 60
           MIF CGISNYSVSVFHLMNHAFFKALLF SAGSVI AMS+EQDMR +GGLASSFP TYAM
Sbjct: 322 MIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPLTYAM 381

Query: 61  MLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYYSFRLLFLT 120
           ML+GSLSLI F FLTGFYSKDVILEL YTKYTISGNF+F LGSVSVLFTSYYSFRLLFLT
Sbjct: 382 MLIGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRLLFLT 441

Query: 121 FLVPTNSFERDIVRCHDVPIPMAIPLILLVLESLFV 157
           FLVPTNSF RDI RCHD PIPMAIPLILL L SLFV
Sbjct: 442 FLVPTNSFGRDISRCHDAPIPMAIPLILLALGSLFV 477

[Close]
BLAST of CmoCh17G004610 vs. TAIR10
Match: ATMG00665.1 (ATMG00665.1 NADH dehydrogenase 5B)

HSP 1 Score: 260.8 bits (665), Expect = 6.0e-70
Identity = 138/156 (88.46%), Postives = 142/156 (91.03%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAMSNEQDMRMIGGLASSFPFTYAM 60
           MIF CGISNYSVSVFHLMNHAFFKALLF SAGSVI AMS+EQDMR +GGLASSFP TYAM
Sbjct: 322 MIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPLTYAM 381

Query: 61  MLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYYSFRLLFLT 120
           ML+GSLSLI F FLTGFYSKDVILEL YTKYTISGNF+F LGSVSVLFTSYYSFRLLFLT
Sbjct: 382 MLIGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRLLFLT 441

Query: 121 FLVPTNSFERDIVRCHDVPIPMAIPLILLVLESLFV 157
           FLVPTNSF RDI RCHD PIPMAIPLILL L SLFV
Sbjct: 442 FLVPTNSFGRDISRCHDAPIPMAIPLILLALGSLFV 477

[Close]
BLAST of CmoCh17G004610 vs. TAIR10
Match: ATCG01010.1 (ATCG01010.1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein)

HSP 1 Score: 64.3 bits (155), Expect = 8.3e-11
Identity = 48/136 (35.29%), Postives = 71/136 (52.21%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAM--------SNEQDMRMIGGLAS 60
           M+   G+ +Y  ++FHL+ HA+ KALLF  +GS+I +M           Q+M ++GGL  
Sbjct: 330 MMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMILMGGLTK 389

Query: 61  SFPFTYAMMLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYY 120
             P T    L+G+LSL     L  F+SKD IL         S  F+    S + L T++Y
Sbjct: 390 HVPITKTAFLIGTLSLCGIPPLACFWSKDEILN---DSLLFSPIFAIIACSTAGL-TAFY 449

Query: 121 SFRLLFLTFLVPTNSF 129
            FR+  LTF    N++
Sbjct: 450 MFRIYLLTFEGHLNTY 461

[Close]
BLAST of CmoCh17G004610 vs. NCBI nr
Match: gi|334832658|gb|AEH04468.1| (NADH dehydrogenase subunit 5 [Klainedoxa gabonensis])

HSP 1 Score: 267.3 bits (682), Expect = 1.8e-68
Identity = 141/156 (90.38%), Postives = 144/156 (92.31%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAMSNEQDMRMIGGLASSFPFTYAM 60
           MIF CGISNYSVSVFHLMNHAFFKALLF SAGSVI AMS+EQDMR +GGLASSFPFTYAM
Sbjct: 39  MIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPFTYAM 98

Query: 61  MLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYYSFRLLFLT 120
           MLMGSLSLI F FLTGFYSKDVILEL YTKYTISGNF+F LGSVSVLFTSYYSFR LFLT
Sbjct: 99  MLMGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRSLFLT 158

Query: 121 FLVPTNSFERDIVRCHDVPIPMAIPLILLVLESLFV 157
           FLVPTNSFERDIVRCHD PIPMAIPLILL L SLFV
Sbjct: 159 FLVPTNSFERDIVRCHDAPIPMAIPLILLALGSLFV 194

[Close]
BLAST of CmoCh17G004610 vs. NCBI nr
Match: gi|334832646|gb|AEH04462.1| (NADH dehydrogenase subunit 5 [Byrsonima crassifolia])

HSP 1 Score: 266.9 bits (681), Expect = 2.4e-68
Identity = 141/156 (90.38%), Postives = 144/156 (92.31%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAMSNEQDMRMIGGLASSFPFTYAM 60
           MIF CGISNYSVSVFHLMNHAFFKALLF SAGSVI AMS+EQDMR +GGLASSFPFTYAM
Sbjct: 39  MIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPFTYAM 98

Query: 61  MLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYYSFRLLFLT 120
           MLMGSLSLI F FLTGFYSKDVILEL YTKYTISGNF+F LGSVSVLFTSYYSFRLLFLT
Sbjct: 99  MLMGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRLLFLT 158

Query: 121 FLVPTNSFERDIVRCHDVPIPMAIPLILLVLESLFV 157
           FLVPTNSF RDIVRCHD PIPMAIPLILL L SLFV
Sbjct: 159 FLVPTNSFGRDIVRCHDAPIPMAIPLILLALGSLFV 194

[Close]
BLAST of CmoCh17G004610 vs. NCBI nr
Match: gi|128791|sp|P10330.2|NU5M_OENBE (RecName: Full=NADH-ubiquinone oxidoreductase chain 5; AltName: Full=NADH dehydrogenase subunit 5)

HSP 1 Score: 265.8 bits (678), Expect = 5.3e-68
Identity = 140/156 (89.74%), Postives = 144/156 (92.31%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAMSNEQDMRMIGGLASSFPFTYAM 60
           MIF CGISNYSVSVFHLMNHAFFKALLF SAGSVI AMS+EQDMR +GGLASSFPFTYAM
Sbjct: 322 MIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPFTYAM 381

Query: 61  MLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYYSFRLLFLT 120
           MLMGSLSLI F FLTGFYSKDVILEL YTKYTISGNF+F LGSVSVLFTSYYSFRLLFLT
Sbjct: 382 MLMGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRLLFLT 441

Query: 121 FLVPTNSFERDIVRCHDVPIPMAIPLILLVLESLFV 157
           FLVPTNSF RDI+RCHD PIPMAIPLILL L SLFV
Sbjct: 442 FLVPTNSFGRDILRCHDAPIPMAIPLILLALGSLFV 477

[Close]
BLAST of CmoCh17G004610 vs. NCBI nr
Match: gi|295311650|ref|YP_003587253.1| (NADH dehydrogenase subunit 5 [Citrullus lanatus])

HSP 1 Score: 265.8 bits (678), Expect = 5.3e-68
Identity = 140/156 (89.74%), Postives = 144/156 (92.31%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAMSNEQDMRMIGGLASSFPFTYAM 60
           MIF CGISNYSVSVFHLMNHAFFKALLF SAGSVI AMS+EQDMR +GGLASSFPFTYAM
Sbjct: 322 MIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPFTYAM 381

Query: 61  MLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYYSFRLLFLT 120
           MLMGSLSLI F FLTGFYSKDVILEL YTKYTISGNF+F LGSVSVLFTSYYSFRLLFLT
Sbjct: 382 MLMGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRLLFLT 441

Query: 121 FLVPTNSFERDIVRCHDVPIPMAIPLILLVLESLFV 157
           FLVPTNSF RDI+RCHD PIPMAIPLILL L SLFV
Sbjct: 442 FLVPTNSFGRDILRCHDAPIPMAIPLILLALGSLFV 477

[Close]
BLAST of CmoCh17G004610 vs. NCBI nr
Match: gi|947838270|ref|YP_009177610.1| (NADH dehydrogenase subunit 5 (mitochondrion) [Gossypium barbadense])

HSP 1 Score: 265.8 bits (678), Expect = 5.3e-68
Identity = 140/156 (89.74%), Postives = 144/156 (92.31%), Query Frame = 1 

Query: 1   MIFTCGISNYSVSVFHLMNHAFFKALLFQSAGSVIRAMSNEQDMRMIGGLASSFPFTYAM 60
           MIF CGISNYSVSVFHLMNHAFFKALLF SAGSVI AMS+EQDMR +GGLASSFPFTYAM
Sbjct: 322 MIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPFTYAM 381

Query: 61  MLMGSLSLIEFSFLTGFYSKDVILELTYTKYTISGNFSFRLGSVSVLFTSYYSFRLLFLT 120
           MLMGSLSLI F FLTGFYSKDVILEL YTKYTISGNF+F LGSVSVLFTSYYSFRLLFLT
Sbjct: 382 MLMGSLSLIGFPFLTGFYSKDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRLLFLT 441

Query: 121 FLVPTNSFERDIVRCHDVPIPMAIPLILLVLESLFV 157
           FLVPTNSF RDI+RCHD PIPMAIPLILL L SLFV
Sbjct: 442 FLVPTNSFGRDILRCHDAPIPMAIPLILLALGSLFV 477

The following BLAST results are available for this feature:
BLAST of CmoCh17G004610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NU5M_OENBE3.3e-7089.74NADH-ubiquinone oxidoreductase chain 5 OS=Oenothera berteroana GN=ND5 PE=2 SV=2[more]
NU5M_WHEAT1.1e-6888.46NADH-ubiquinone oxidoreductase chain 5 OS=Triticum aestivum GN=ND5 PE=3 SV=1[more]
NU5M_ARATH1.1e-6888.46NADH-ubiquinone oxidoreductase chain 5 OS=Arabidopsis thaliana GN=ND5 PE=2 SV=3[more]
NU5M_MARPO2.1e-6483.33NADH-ubiquinone oxidoreductase chain 5 OS=Marchantia polymorpha GN=ND5 PE=3 SV=2[more]
NU5M_PHYIN6.5e-4253.85NADH-ubiquinone oxidoreductase chain 5 OS=Phytophthora infestans GN=ND5 PE=3 SV=... [more]
BLAST of CmoCh17G004610 vs. TrEMBL
Match NameE-valueIdentityDescription
F8TCC3_KLAGA1.3e-6890.38NADH dehydrogenase subunit 5 (Fragment) OS=Klainedoxa gabonensis GN=nad5 PE=4 SV... [more]
F8TCB7_BYRCR1.7e-6890.38NADH dehydrogenase subunit 5 (Fragment) OS=Byrsonima crassifolia GN=nad5 PE=4 SV... [more]
A0A165EHK0_GOSRA3.7e-6889.74NADH dehydrogenase subunit 5 OS=Gossypium raimondii GN=nad5 PE=4 SV=1[more]
B0L4M4_9MAGN3.7e-6889.74NADH-ubiquinone oxidoreductase chain 5 (Fragment) OS=Daphniphyllum sp. Qiu 94162... [more]
D5I3C3_CITLA3.7e-6889.74NADH-ubiquinone oxidoreductase chain 5 OS=Citrullus lanatus GN=nad5 PE=3 SV=1[more]
BLAST of CmoCh17G004610 vs. TAIR10
Match NameE-valueIdentityDescription
ATMG00060.16.0e-7088.46ATMG00060.1 NADH dehydrogenase subunit 5C[more]
ATMG00513.16.0e-7088.46ATMG00513.1 NADH dehydrogenase 5A[more]
ATMG00665.16.0e-7088.46ATMG00665.1 NADH dehydrogenase 5B[more]
ATCG01010.18.3e-1135.29ATCG01010.1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein[more]
BLAST of CmoCh17G004610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|334832658|gb|AEH04468.1|1.8e-6890.38NADH dehydrogenase subunit 5 [Klainedoxa gabonensis][more]
gi|334832646|gb|AEH04462.1|2.4e-6890.38NADH dehydrogenase subunit 5 [Byrsonima crassifolia][more]
gi|128791|sp|P10330.2|NU5M_OENBE5.3e-6889.74RecName: Full=NADH-ubiquinone oxidoreductase chain 5; AltName: Full=NADH dehydro... [more]
gi|295311650|ref|YP_003587253.1|5.3e-6889.74NADH dehydrogenase subunit 5 [Citrullus lanatus][more]
gi|947838270|ref|YP_009177610.1|5.3e-6889.74NADH dehydrogenase subunit 5 (mitochondrion) [Gossypium barbadense][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001750ND/Mrp_mem
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone
biological_process GO:0015992 proton transport
biological_process GO:0006814 sodium ion transport
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G004610.1CmoCh17G004610.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitPFAMPF00361Proton_antipo_Mcoord: 5..93
score: 1.2
NoneNo IPR availablePANTHERPTHR22773NADH DEHYDROGENASEcoord: 1..156
score: 1.3
NoneNo IPR availablePANTHERPTHR22773:SF50NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5coord: 1..156
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh17G004610Carg26661Silver-seed gourdcarcmoB1210
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh17G004610Cucumber (Chinese Long) v3cmocucB0444
CmoCh17G004610Watermelon (97103) v2cmowmbB361
CmoCh17G004610Wax gourdcmowgoB0455
CmoCh17G004610Cucurbita moschata (Rifu)cmocmoB321
CmoCh17G004610Cucumber (Gy14) v1cgycmoB0292
CmoCh17G004610Cucurbita maxima (Rimu)cmacmoB353
CmoCh17G004610Cucurbita maxima (Rimu)cmacmoB898
CmoCh17G004610Wild cucumber (PI 183967)cmocpiB372
CmoCh17G004610Cucumber (Chinese Long) v2cmocuB369
CmoCh17G004610Melon (DHL92) v3.5.1cmomeB306
CmoCh17G004610Watermelon (Charleston Gray)cmowcgB325
CmoCh17G004610Watermelon (97103) v1cmowmB346
CmoCh17G004610Cucurbita pepo (Zucchini)cmocpeB335
CmoCh17G004610Cucurbita pepo (Zucchini)cmocpeB341
CmoCh17G004610Bottle gourd (USVL1VR-Ls)cmolsiB320
CmoCh17G004610Cucumber (Gy14) v2cgybcmoB744
CmoCh17G004610Melon (DHL92) v3.6.1cmomedB351
CmoCh17G004610Silver-seed gourdcarcmoB0819