CmoCh17G004260 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCTTTTCAATGCCTTTACATTTGATTCTTTCACCTTTCATCCACCACTTGCTCGTAGAATGACATTGAGGTACTCCCTTGCTCCTAAATCACACATCTCTTCCTCTCGTTCTCTTTCGGATGAGAGTGAGAAGTTATGCTCATTCCAAGTTCGAAGTACCAGAGCTTATGTCGCTCATGTCAGCCTAATGCTCTCTCTCGAACAGATGCCGTCAACAACTCTTGTGTAGCCTAATGCTCTCTCTTGAACAGATGCTGTCAACAACTCTTGTGAAGCCATCTACCAGTGGCTCAAGGAATATGTATTTGCTTATCTCATTCTCTAAATCGGCTGTGGACTTCGTCCAACAATTTCTAATTATTTAAAAATATAAAGAAAAAAAAAATTATAAATTAAATTAGGAAAAGAAGTAGGTAAAGTAAATATATTTTTTGAAACTAAAAAAAGGTTGTCCTCCGAGTTCATCCCTTCCTTTACCGCTAAGAAACCCCAACGCGCAAAGCTCCATTGTTGGCTGTGAAGATCCTTAGAATTCCATGTTGCAGTGCCCAATGGCGTTCGATTCAATTCTCCATAATACCACGGCCGCCGCACACAGATTCATCTTCTCTGGCGCTTAATACAGCTCAAAAGAGGAATTTATTCCCTCTCAAACTCAGTTGCCATTTTTAGAGGTCGATTTGCTTCCACTTCAGTCTCTCCTCTTTTAACCCTTTTCAAATTCGCCTCAAAGCCCCATCTGGGTTGTGTTTTGATTTTCGAATTTCAGTCTCGAAGCGGCTCCTTCGCTGTTCGACCATGGCGTCGCAGGCTGATTATGTCGATAAAATGCAGCTTCGTCAGAGCTATAGAAATTTATGGCACACTGATCTTATGGGCGCCATTGCTGCCCACCCATCTTGTATGTGTTCGTGATTTTTTGTTTGATTGCTTTGATTTTTTGGGATGAGTGCTGAAAATCTTGGGTTTGTAGTTGATTCTTTTGTTGGGTTTTCTTTCTCTGTTTCGTTAAATGATATAGGGAAAAAGTTACCTAAATCGAATCATTGTTGATTTTGTTCTCTTGCTCTGTTCCTTTCCATGTGATTAACCATGGCGGCTGTTGGTTCCTTTGCTATTTGAGGGGTTTCTAATTAGAACATTATCTTGTTCTTTTTTGCAGATTGTTGCTTTTCTATATTCTGGTAAGCTGTTTGTTCTCTGATGAGTTCTCAGTTATAGTTTTGATTTCTGTAATTGAAACGGTTTGTTAAGTTCGTGGACACGAGTTCTTGAGGATTATTGAAAGGAGTAGCTACATATTGGCTAATTAAGAGGAAGATCATGAATTTTGTAAGTAAAGAACATTTTCTCCATTGGTATGAGGTCTTTTGGGGAACCCAAAAGCAAAACCATGAGAGCTTATGCTCAAAGTGGACAATATCATACTATTGTGGAGGTTCGTGATTCCTAACATGGTATTAGAGTCATGTCCTTAACTTACCCATGTCATAGAATCCTTAAATGTCGAACAAAGAAGTTGTGAGTCTCGAAGATGTAGTCGAAAGTGACTCAAGTGTCAAACAAATGGTGTATTTTTGTTTGAGGGCTCCAGAGAAAGGAGTCGAGCCTCGACTAAAGGGAGACTGTTTGAGGGTTCCATAGGCCTCCGGGGAGGCTCTATGGTTACTTTGTTCAAGAGGAGGATTGTTGAGGATTATTAAAAAGAGTAGTCTCACATTGACTAGTTAAGAGGAAGATCATGGGTTTATAGGTAAGAAACGTTATCTCTATAGGTATGAATAGAGTTCATAGTTTGAAGACCTGAATAGAGTTCATATTATACCATTGTGGAGGTTCGTGATTTCTAGGTAAATACGTGCAAGCTTTATAGTATTCAAAATGGTATTGGTTTTTCTTGCTTTCTAGGTTTGTAGAATACTTCGATATGGTTTTTCTTACAATATTTCTTGATTTTGTGAAAAGTGGCCCATGTGTTTCATACCTTCTGCGAAAACGAGCTCTTTACAATGATATGTCGAGGTATTTTCGACGACGGTTCGTAATTTTATCATAAGATAAAGCATGTACCATTTCTAAACCTTTCGATGAATCTATCATAGATACACATGTTGTGGTGGCTACATGCCTTGCAGTGGCAAGTGTGGAGAAAGTAAATGTCCTGCAGCTTGTCTATGCACCGAGGTACATTTATCGATCGAGAACCGTCATCTCCTATAAGCCTTTAGTCATCTTTTTGTGGTCATAGTTTGAAGAATCGCGTGTTTTGATTATGAACTCTATTCAGGTTTTCTGTTGCTTTACTAACTCGGTTGCATCGACGCGTTTCATGTTGCAAGACGAGTTCAATATACAGACAACTGAGTGTGATAACTGCATCATCGTAACGTCTTCGCTCTCGATCCATTCGTTCGTCGAGTTACTCGCATCTCATTCTTTTCACTATCCTTAACATGTTTGGGCTTACTTTGCAGGGCTTTATGTTGTGCCTCTCACAACTGGCTTGCATATGCTCATTAATTGCTTGCTTGCTTGGAAGTGAAGAACTTCAAGAGACCGCACATATAATGTCCTGTTTATCTAACTTTGTCTACTGCACGTAAGGGGCTTGCATTTCAATCTTGAAGTTCTTTTCATATTTTGAATCATACTATCATTTATGAATTTGTTCGTTTGTTTTGCAGCGTCTGTGCGTGCATGCAGGTACGCCCGAGTGTTAAAAATTATGTCCGGTTAGAATTTTTAAAAGTTCAAAGATATCTTTACCGTTAGTATGGTGTTTAAAAAATACTCATGAACTTTGAAAGTAGGATTAACGCTATTAACATTTATAACGAAGTTTAATATAGTTTCTACCGTCAATATATGAACGGAAAACATCTATTTACACCTTATAGATCATCTCGTTCTTCAATTTAGTTCTTCAATTCAATGAGTACATAATCAAGGAATACTATCTCCATTGGTATGGGACCTTTTGGGGAAGCTCAAAGAAAAGCCATGAGAGTTTATGCTCAAAGTGGACTATATCATACTGTTGTGGAGAGTCGTGTTCAACTAACAAATACTTGAACTCTTTGTAGTAGCGTGCATGAATTCTACCGTTAAACGAGTAGTACATTACAATACAAATTAATGATTCTAACCCTAAATTAGTCAATGTGGGGACTTCTCCCTCGAACAAACTACATTATAGAGCCACCCCCAAGTTCTATGTATCTCTCAAACAGCCTCCTATTGATCGAGGCTCGACTCCTGCACCTTTTGTTCTGACACTTGAGTCACATTTGACTACACCTTCGAGACTCACAATTTGAGGATTCTATTGACATGACTATGTTAAAGGGCATGACTCTGTTGCTATGTTAGGAATCACGAACCTCCACAATGGTATGATAGTGCCCACTTTGAGCATATGTTCTCTCATGGCTTTGTTTTACGCTACCCTTTGGACTCCTCCCAACAACCTATTATGTTTTTTCTGATGTTGCTATGGGGAACTGCAGACACAGCACAAGCTTGAGCTGGACAAAAGAGATGGCAATTTTGGACCCCAACCAGCCATGGCTGTGCCTCCTACACAGGAGATGTCTCGGATGACTCAGCCGGTTCCTGATCCGGATGGTTATCCTCCTCCTACGGTGTCTGGACAACCATTCGGATACCCGCCCCCTCCCCCGGCTCAAGGCTACCCGGTCCCGGCTCATTATCAAGGCTATCCGCCAACGGGTTATGCTCCGTATCCGACCCCGGGTCAATACAATTGATTTGTTCCATATTGTTTTGCAAATATGTACCCTCTTTAGATTTGAATTTTCGTAGTAAGAGGGCAGTCGTAGTACAATTTACAACCAGTGGAAAGTTT ATGGATCTTTTCAATGCCTTTACATTTGATTCTTTCACCTTTCATCCACCACTTGCTCGTAGAATGACATTGAGGTACTCCCTTGCTCCTAAATCACACATCTCTTCCTCTCGTTCTCTTTCGGATGAGAGTGAGAAGTTATGCTCATTCCAAGTTCGAAGTACCAGAGCTTATGTCGCTCATCTCAAAAGAGGAATTTATTCCCTCTCAAACTCAGTTGCCATTTTTAGAGTCTCGAAGCGGCTCCTTCGCTGTTCGACCATGGCGTCGCAGGCTGATTATGTCGATAAAATGCAGCTTCGTCAGAGCTATAGAAATTTATGGCACACTGATCTTATGGGCGCCATTGCTGCCCACCCATCTTATTGTTGCTTTTCTATATTCTGGTTTGTAGAATACTTCGATATGGTTTTTCTTACAATATTTCTTGATTTTGTGAAAAGTGGCCCATGTGTTTCATACCTTCTGCGAAAACGAGCTCTTTACAATGATATGTCGAGATACACATGTTGTGGTGGCTACATGCCTTGCAGTGGCAAGTGTGGAGAAAGTAAATGTCCTGCAGCTTGTCTATGCACCGAGGTTTTCTGTTGCTTTACTAACTCGGTTGCATCGACGCGTTTCATGTTGCAAGACGAGTTCAATATACAGACAACTGAGTGTGATAACTGCATCATCGGCTTTATGTTGTGCCTCTCACAACTGGCTTGCATATGCTCATTAATTGCTTGCTTGCTTGGAAGTGAAGAACTTCAAGAGACCGCACATATAATGTCCTGTTTATCTAACTTTGTCTACTGCACCGTCTGTGCGTGCATGCAGACACAGCACAAGCTTGAGCTGGACAAAAGAGATGGCAATTTTGGACCCCAACCAGCCATGGCTGTGCCTCCTACACAGGAGATGTCTCGGATGACTCAGCCGGTTCCTGATCCGGATGGTTATCCTCCTCCTACGGTGTCTGGACAACCATTCGGATACCCGCCCCCTCCCCCGGCTCAAGGCTACCCGGTCCCGGCTCATTATCAAGGCTATCCGCCAACGGGTTATGCTCCGTATCCGACCCCGGGTCAATACAATTGATTTGTTCCATATTGTTTTGCAAATATGTACCCTCTTTAGATTTGAATTTTCGTAGTAAGAGGGCAGTCGTAGTACAATTTACAACCAGTGGAAAGTTT ATGGATCTTTTCAATGCCTTTACATTTGATTCTTTCACCTTTCATCCACCACTTGCTCGTAGAATGACATTGAGGTACTCCCTTGCTCCTAAATCACACATCTCTTCCTCTCGTTCTCTTTCGGATGAGAGTGAGAAGTTATGCTCATTCCAAGTTCGAAGTACCAGAGCTTATGTCGCTCATCTCAAAAGAGGAATTTATTCCCTCTCAAACTCAGTTGCCATTTTTAGAGTCTCGAAGCGGCTCCTTCGCTGTTCGACCATGGCGTCGCAGGCTGATTATGTCGATAAAATGCAGCTTCGTCAGAGCTATAGAAATTTATGGCACACTGATCTTATGGGCGCCATTGCTGCCCACCCATCTTATTGTTGCTTTTCTATATTCTGGTTTGTAGAATACTTCGATATGGTTTTTCTTACAATATTTCTTGATTTTGTGAAAAGTGGCCCATGTGTTTCATACCTTCTGCGAAAACGAGCTCTTTACAATGATATGTCGAGATACACATGTTGTGGTGGCTACATGCCTTGCAGTGGCAAGTGTGGAGAAAGTAAATGTCCTGCAGCTTGTCTATGCACCGAGGTTTTCTGTTGCTTTACTAACTCGGTTGCATCGACGCGTTTCATGTTGCAAGACGAGTTCAATATACAGACAACTGAGTGTGATAACTGCATCATCGGCTTTATGTTGTGCCTCTCACAACTGGCTTGCATATGCTCATTAATTGCTTGCTTGCTTGGAAGTGAAGAACTTCAAGAGACCGCACATATAATGTCCTGTTTATCTAACTTTGTCTACTGCACCGTCTGTGCGTGCATGCAGACACAGCACAAGCTTGAGCTGGACAAAAGAGATGGCAATTTTGGACCCCAACCAGCCATGGCTGTGCCTCCTACACAGGAGATGTCTCGGATGACTCAGCCGGTTCCTGATCCGGATGGTTATCCTCCTCCTACGGTGTCTGGACAACCATTCGGATACCCGCCCCCTCCCCCGGCTCAAGGCTACCCGGTCCCGGCTCATTATCAAGGCTATCCGCCAACGGGTTATGCTCCGTATCCGACCCCGGGTCAATACAATTGA
BLAST of CmoCh17G004260 vs. TrEMBL
Match: A0A0A0KBB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006690 PE=4 SV=1) HSP 1 Score: 395.2 bits (1014), Expect = 8.5e-107 Identity = 200/287 (69.69%), Postives = 220/287 (76.66%), Query Frame = 1
BLAST of CmoCh17G004260 vs. TrEMBL
Match: A0A0S3QXK5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G050600 PE=4 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 1.4e-96 Identity = 179/273 (65.57%), Postives = 210/273 (76.92%), Query Frame = 1
BLAST of CmoCh17G004260 vs. TrEMBL
Match: M0SY08_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 1.3e-94 Identity = 179/274 (65.33%), Postives = 208/274 (75.91%), Query Frame = 1
BLAST of CmoCh17G004260 vs. TrEMBL
Match: F2DM87_HORVD (Predicted protein OS=Hordeum vulgare var. distichum PE=2 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 1.3e-94 Identity = 183/282 (64.89%), Postives = 205/282 (72.70%), Query Frame = 1
BLAST of CmoCh17G004260 vs. TrEMBL
Match: A0A151TF47_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_011911 PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 4.8e-94 Identity = 177/278 (63.67%), Postives = 208/278 (74.82%), Query Frame = 1
BLAST of CmoCh17G004260 vs. TAIR10
Match: AT5G41390.1 (AT5G41390.1 PLAC8 family protein) HSP 1 Score: 336.3 bits (861), Expect = 2.4e-92 Identity = 177/272 (65.07%), Postives = 199/272 (73.16%), Query Frame = 1
BLAST of CmoCh17G004260 vs. TAIR10
Match: AT1G63830.2 (AT1G63830.2 PLAC8 family protein) HSP 1 Score: 330.1 bits (845), Expect = 1.7e-90 Identity = 169/263 (64.26%), Postives = 192/263 (73.00%), Query Frame = 1
BLAST of CmoCh17G004260 vs. TAIR10
Match: AT4G23470.1 (AT4G23470.1 PLAC8 family protein) HSP 1 Score: 314.7 bits (805), Expect = 7.4e-86 Identity = 159/265 (60.00%), Postives = 192/265 (72.45%), Query Frame = 1
BLAST of CmoCh17G004260 vs. NCBI nr
Match: gi|449441622|ref|XP_004138581.1| (PREDICTED: uncharacterized protein LOC101221132 [Cucumis sativus]) HSP 1 Score: 395.2 bits (1014), Expect = 1.2e-106 Identity = 200/287 (69.69%), Postives = 220/287 (76.66%), Query Frame = 1
BLAST of CmoCh17G004260 vs. NCBI nr
Match: gi|659116650|ref|XP_008458185.1| (PREDICTED: survival motor neuron protein-like isoform X4 [Cucumis melo]) HSP 1 Score: 382.9 bits (982), Expect = 6.3e-103 Identity = 194/290 (66.90%), Postives = 215/290 (74.14%), Query Frame = 1
BLAST of CmoCh17G004260 vs. NCBI nr
Match: gi|965656630|dbj|BAT73049.1| (hypothetical protein VIGAN_01050600 [Vigna angularis var. angularis]) HSP 1 Score: 361.3 bits (926), Expect = 2.0e-96 Identity = 179/273 (65.57%), Postives = 210/273 (76.92%), Query Frame = 1
BLAST of CmoCh17G004260 vs. NCBI nr
Match: gi|695025869|ref|XP_009400203.1| (PREDICTED: protein shisa-4-like [Musa acuminata subsp. malaccensis]) HSP 1 Score: 354.8 bits (909), Expect = 1.8e-94 Identity = 179/274 (65.33%), Postives = 208/274 (75.91%), Query Frame = 1
BLAST of CmoCh17G004260 vs. NCBI nr
Match: gi|326502868|dbj|BAJ99062.1| (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 354.8 bits (909), Expect = 1.8e-94 Identity = 183/282 (64.89%), Postives = 205/282 (72.70%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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