CmoCh17G004260 (gene) Cucurbita moschata (Rifu)

NameCmoCh17G004260
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPLAC8 family protein
LocationCmo_Chr17 : 2838462 .. 2842331 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTTTTCAATGCCTTTACATTTGATTCTTTCACCTTTCATCCACCACTTGCTCGTAGAATGACATTGAGGTACTCCCTTGCTCCTAAATCACACATCTCTTCCTCTCGTTCTCTTTCGGATGAGAGTGAGAAGTTATGCTCATTCCAAGTTCGAAGTACCAGAGCTTATGTCGCTCATGTCAGCCTAATGCTCTCTCTCGAACAGATGCCGTCAACAACTCTTGTGTAGCCTAATGCTCTCTCTTGAACAGATGCTGTCAACAACTCTTGTGAAGCCATCTACCAGTGGCTCAAGGAATATGTATTTGCTTATCTCATTCTCTAAATCGGCTGTGGACTTCGTCCAACAATTTCTAATTATTTAAAAATATAAAGAAAAAAAAAATTATAAATTAAATTAGGAAAAGAAGTAGGTAAAGTAAATATATTTTTTGAAACTAAAAAAAGGTTGTCCTCCGAGTTCATCCCTTCCTTTACCGCTAAGAAACCCCAACGCGCAAAGCTCCATTGTTGGCTGTGAAGATCCTTAGAATTCCATGTTGCAGTGCCCAATGGCGTTCGATTCAATTCTCCATAATACCACGGCCGCCGCACACAGATTCATCTTCTCTGGCGCTTAATACAGCTCAAAAGAGGAATTTATTCCCTCTCAAACTCAGTTGCCATTTTTAGAGGTCGATTTGCTTCCACTTCAGTCTCTCCTCTTTTAACCCTTTTCAAATTCGCCTCAAAGCCCCATCTGGGTTGTGTTTTGATTTTCGAATTTCAGTCTCGAAGCGGCTCCTTCGCTGTTCGACCATGGCGTCGCAGGCTGATTATGTCGATAAAATGCAGCTTCGTCAGAGCTATAGAAATTTATGGCACACTGATCTTATGGGCGCCATTGCTGCCCACCCATCTTGTATGTGTTCGTGATTTTTTGTTTGATTGCTTTGATTTTTTGGGATGAGTGCTGAAAATCTTGGGTTTGTAGTTGATTCTTTTGTTGGGTTTTCTTTCTCTGTTTCGTTAAATGATATAGGGAAAAAGTTACCTAAATCGAATCATTGTTGATTTTGTTCTCTTGCTCTGTTCCTTTCCATGTGATTAACCATGGCGGCTGTTGGTTCCTTTGCTATTTGAGGGGTTTCTAATTAGAACATTATCTTGTTCTTTTTTGCAGATTGTTGCTTTTCTATATTCTGGTAAGCTGTTTGTTCTCTGATGAGTTCTCAGTTATAGTTTTGATTTCTGTAATTGAAACGGTTTGTTAAGTTCGTGGACACGAGTTCTTGAGGATTATTGAAAGGAGTAGCTACATATTGGCTAATTAAGAGGAAGATCATGAATTTTGTAAGTAAAGAACATTTTCTCCATTGGTATGAGGTCTTTTGGGGAACCCAAAAGCAAAACCATGAGAGCTTATGCTCAAAGTGGACAATATCATACTATTGTGGAGGTTCGTGATTCCTAACATGGTATTAGAGTCATGTCCTTAACTTACCCATGTCATAGAATCCTTAAATGTCGAACAAAGAAGTTGTGAGTCTCGAAGATGTAGTCGAAAGTGACTCAAGTGTCAAACAAATGGTGTATTTTTGTTTGAGGGCTCCAGAGAAAGGAGTCGAGCCTCGACTAAAGGGAGACTGTTTGAGGGTTCCATAGGCCTCCGGGGAGGCTCTATGGTTACTTTGTTCAAGAGGAGGATTGTTGAGGATTATTAAAAAGAGTAGTCTCACATTGACTAGTTAAGAGGAAGATCATGGGTTTATAGGTAAGAAACGTTATCTCTATAGGTATGAATAGAGTTCATAGTTTGAAGACCTGAATAGAGTTCATATTATACCATTGTGGAGGTTCGTGATTTCTAGGTAAATACGTGCAAGCTTTATAGTATTCAAAATGGTATTGGTTTTTCTTGCTTTCTAGGTTTGTAGAATACTTCGATATGGTTTTTCTTACAATATTTCTTGATTTTGTGAAAAGTGGCCCATGTGTTTCATACCTTCTGCGAAAACGAGCTCTTTACAATGATATGTCGAGGTATTTTCGACGACGGTTCGTAATTTTATCATAAGATAAAGCATGTACCATTTCTAAACCTTTCGATGAATCTATCATAGATACACATGTTGTGGTGGCTACATGCCTTGCAGTGGCAAGTGTGGAGAAAGTAAATGTCCTGCAGCTTGTCTATGCACCGAGGTACATTTATCGATCGAGAACCGTCATCTCCTATAAGCCTTTAGTCATCTTTTTGTGGTCATAGTTTGAAGAATCGCGTGTTTTGATTATGAACTCTATTCAGGTTTTCTGTTGCTTTACTAACTCGGTTGCATCGACGCGTTTCATGTTGCAAGACGAGTTCAATATACAGACAACTGAGTGTGATAACTGCATCATCGTAACGTCTTCGCTCTCGATCCATTCGTTCGTCGAGTTACTCGCATCTCATTCTTTTCACTATCCTTAACATGTTTGGGCTTACTTTGCAGGGCTTTATGTTGTGCCTCTCACAACTGGCTTGCATATGCTCATTAATTGCTTGCTTGCTTGGAAGTGAAGAACTTCAAGAGACCGCACATATAATGTCCTGTTTATCTAACTTTGTCTACTGCACGTAAGGGGCTTGCATTTCAATCTTGAAGTTCTTTTCATATTTTGAATCATACTATCATTTATGAATTTGTTCGTTTGTTTTGCAGCGTCTGTGCGTGCATGCAGGTACGCCCGAGTGTTAAAAATTATGTCCGGTTAGAATTTTTAAAAGTTCAAAGATATCTTTACCGTTAGTATGGTGTTTAAAAAATACTCATGAACTTTGAAAGTAGGATTAACGCTATTAACATTTATAACGAAGTTTAATATAGTTTCTACCGTCAATATATGAACGGAAAACATCTATTTACACCTTATAGATCATCTCGTTCTTCAATTTAGTTCTTCAATTCAATGAGTACATAATCAAGGAATACTATCTCCATTGGTATGGGACCTTTTGGGGAAGCTCAAAGAAAAGCCATGAGAGTTTATGCTCAAAGTGGACTATATCATACTGTTGTGGAGAGTCGTGTTCAACTAACAAATACTTGAACTCTTTGTAGTAGCGTGCATGAATTCTACCGTTAAACGAGTAGTACATTACAATACAAATTAATGATTCTAACCCTAAATTAGTCAATGTGGGGACTTCTCCCTCGAACAAACTACATTATAGAGCCACCCCCAAGTTCTATGTATCTCTCAAACAGCCTCCTATTGATCGAGGCTCGACTCCTGCACCTTTTGTTCTGACACTTGAGTCACATTTGACTACACCTTCGAGACTCACAATTTGAGGATTCTATTGACATGACTATGTTAAAGGGCATGACTCTGTTGCTATGTTAGGAATCACGAACCTCCACAATGGTATGATAGTGCCCACTTTGAGCATATGTTCTCTCATGGCTTTGTTTTACGCTACCCTTTGGACTCCTCCCAACAACCTATTATGTTTTTTCTGATGTTGCTATGGGGAACTGCAGACACAGCACAAGCTTGAGCTGGACAAAAGAGATGGCAATTTTGGACCCCAACCAGCCATGGCTGTGCCTCCTACACAGGAGATGTCTCGGATGACTCAGCCGGTTCCTGATCCGGATGGTTATCCTCCTCCTACGGTGTCTGGACAACCATTCGGATACCCGCCCCCTCCCCCGGCTCAAGGCTACCCGGTCCCGGCTCATTATCAAGGCTATCCGCCAACGGGTTATGCTCCGTATCCGACCCCGGGTCAATACAATTGATTTGTTCCATATTGTTTTGCAAATATGTACCCTCTTTAGATTTGAATTTTCGTAGTAAGAGGGCAGTCGTAGTACAATTTACAACCAGTGGAAAGTTT

mRNA sequence

ATGGATCTTTTCAATGCCTTTACATTTGATTCTTTCACCTTTCATCCACCACTTGCTCGTAGAATGACATTGAGGTACTCCCTTGCTCCTAAATCACACATCTCTTCCTCTCGTTCTCTTTCGGATGAGAGTGAGAAGTTATGCTCATTCCAAGTTCGAAGTACCAGAGCTTATGTCGCTCATCTCAAAAGAGGAATTTATTCCCTCTCAAACTCAGTTGCCATTTTTAGAGTCTCGAAGCGGCTCCTTCGCTGTTCGACCATGGCGTCGCAGGCTGATTATGTCGATAAAATGCAGCTTCGTCAGAGCTATAGAAATTTATGGCACACTGATCTTATGGGCGCCATTGCTGCCCACCCATCTTATTGTTGCTTTTCTATATTCTGGTTTGTAGAATACTTCGATATGGTTTTTCTTACAATATTTCTTGATTTTGTGAAAAGTGGCCCATGTGTTTCATACCTTCTGCGAAAACGAGCTCTTTACAATGATATGTCGAGATACACATGTTGTGGTGGCTACATGCCTTGCAGTGGCAAGTGTGGAGAAAGTAAATGTCCTGCAGCTTGTCTATGCACCGAGGTTTTCTGTTGCTTTACTAACTCGGTTGCATCGACGCGTTTCATGTTGCAAGACGAGTTCAATATACAGACAACTGAGTGTGATAACTGCATCATCGGCTTTATGTTGTGCCTCTCACAACTGGCTTGCATATGCTCATTAATTGCTTGCTTGCTTGGAAGTGAAGAACTTCAAGAGACCGCACATATAATGTCCTGTTTATCTAACTTTGTCTACTGCACCGTCTGTGCGTGCATGCAGACACAGCACAAGCTTGAGCTGGACAAAAGAGATGGCAATTTTGGACCCCAACCAGCCATGGCTGTGCCTCCTACACAGGAGATGTCTCGGATGACTCAGCCGGTTCCTGATCCGGATGGTTATCCTCCTCCTACGGTGTCTGGACAACCATTCGGATACCCGCCCCCTCCCCCGGCTCAAGGCTACCCGGTCCCGGCTCATTATCAAGGCTATCCGCCAACGGGTTATGCTCCGTATCCGACCCCGGGTCAATACAATTGATTTGTTCCATATTGTTTTGCAAATATGTACCCTCTTTAGATTTGAATTTTCGTAGTAAGAGGGCAGTCGTAGTACAATTTACAACCAGTGGAAAGTTT

Coding sequence (CDS)

ATGGATCTTTTCAATGCCTTTACATTTGATTCTTTCACCTTTCATCCACCACTTGCTCGTAGAATGACATTGAGGTACTCCCTTGCTCCTAAATCACACATCTCTTCCTCTCGTTCTCTTTCGGATGAGAGTGAGAAGTTATGCTCATTCCAAGTTCGAAGTACCAGAGCTTATGTCGCTCATCTCAAAAGAGGAATTTATTCCCTCTCAAACTCAGTTGCCATTTTTAGAGTCTCGAAGCGGCTCCTTCGCTGTTCGACCATGGCGTCGCAGGCTGATTATGTCGATAAAATGCAGCTTCGTCAGAGCTATAGAAATTTATGGCACACTGATCTTATGGGCGCCATTGCTGCCCACCCATCTTATTGTTGCTTTTCTATATTCTGGTTTGTAGAATACTTCGATATGGTTTTTCTTACAATATTTCTTGATTTTGTGAAAAGTGGCCCATGTGTTTCATACCTTCTGCGAAAACGAGCTCTTTACAATGATATGTCGAGATACACATGTTGTGGTGGCTACATGCCTTGCAGTGGCAAGTGTGGAGAAAGTAAATGTCCTGCAGCTTGTCTATGCACCGAGGTTTTCTGTTGCTTTACTAACTCGGTTGCATCGACGCGTTTCATGTTGCAAGACGAGTTCAATATACAGACAACTGAGTGTGATAACTGCATCATCGGCTTTATGTTGTGCCTCTCACAACTGGCTTGCATATGCTCATTAATTGCTTGCTTGCTTGGAAGTGAAGAACTTCAAGAGACCGCACATATAATGTCCTGTTTATCTAACTTTGTCTACTGCACCGTCTGTGCGTGCATGCAGACACAGCACAAGCTTGAGCTGGACAAAAGAGATGGCAATTTTGGACCCCAACCAGCCATGGCTGTGCCTCCTACACAGGAGATGTCTCGGATGACTCAGCCGGTTCCTGATCCGGATGGTTATCCTCCTCCTACGGTGTCTGGACAACCATTCGGATACCCGCCCCCTCCCCCGGCTCAAGGCTACCCGGTCCCGGCTCATTATCAAGGCTATCCGCCAACGGGTTATGCTCCGTATCCGACCCCGGGTCAATACAATTGA
BLAST of CmoCh17G004260 vs. TrEMBL
Match: A0A0A0KBB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006690 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 8.5e-107
Identity = 200/287 (69.69%), Postives = 220/287 (76.66%), Query Frame = 1

Query: 88  MASQADYVDKMQLRQSYRNLWHTDLMGAIAAHPSYCCFSIFWFVEYFDMVFLTIFLDFVK 147
           MASQADY+DKMQLRQ+YRN WHTDL G IAA P YCCFS+F                   
Sbjct: 1   MASQADYMDKMQLRQNYRNFWHTDLTGTIAASPPYCCFSVF------------------- 60

Query: 148 SGPCVSYLLRKRALYNDMSRYTCCGGYMPCSGKCGESKCPAACLCTEVFCCFTNSVASTR 207
             PCVSYLLRKRALY+DMSRYTCCGGYMPCSGKCGE  CP ACLCTEVFCCF NSVASTR
Sbjct: 61  CSPCVSYLLRKRALYDDMSRYTCCGGYMPCSGKCGEKHCPEACLCTEVFCCFANSVASTR 120

Query: 208 FMLQDEFNIQTTECDNCIIGFMLCLSQLACICSLIACLLGSEELQETAHIMSCLSNFVYC 267
           FMLQDEFNIQ+TECDNCIIGFMLCLSQLACICS+IACLLGSEELQE + +++CLSN VYC
Sbjct: 121 FMLQDEFNIQSTECDNCIIGFMLCLSQLACICSIIACLLGSEELQEASDLITCLSNLVYC 180

Query: 268 TVCACMQTQHKLELDKRDGNFGPQ-PAMAVPPTQEMSRMTQPVPDP-DGYPPPTVSGQPF 327
           +VCACMQTQHK+E+DKRDG F PQ P MAVP TQ+MSR+ QP+P P  GYPPP V GQPF
Sbjct: 181 SVCACMQTQHKIEMDKRDGKFEPQLPPMAVPLTQQMSRIDQPIPAPVGGYPPPPVYGQPF 240

Query: 328 GYPPPPP---------------AQGYPVPAHYQGYPPTGYAPYPTPG 358
           G+ PPP                AQGYP P  +QGYPP+GY  +P PG
Sbjct: 241 GHLPPPVVQGYPPQPRPTPTHLAQGYPHPPLFQGYPPSGYPQHPPPG 268

BLAST of CmoCh17G004260 vs. TrEMBL
Match: A0A0S3QXK5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G050600 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 1.4e-96
Identity = 179/273 (65.57%), Postives = 210/273 (76.92%), Query Frame = 1

Query: 88  MASQADYVDKMQLRQSYRNLWHTDLMGAIAAHPSYCCFSIFWFVEYFDMVFLTIFLDFVK 147
           MASQ ++++KMQ RQ++RNLWHTDLM  I A   YCCF+++                   
Sbjct: 1   MASQ-EHIEKMQARQNFRNLWHTDLMRTIQADTPYCCFALW------------------- 60

Query: 148 SGPCVSYLLRKRALYNDMSRYTCCGGYMPCSGKCGESKCPAACLCTEVFCCFTNSVASTR 207
             PCVSYLLRKRALY+DMSRYTCC GYMPCSG+CGESKCP  CLCTEVF CF NSVASTR
Sbjct: 61  CAPCVSYLLRKRALYDDMSRYTCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTR 120

Query: 208 FMLQDEFNIQTTECDNCIIGFMLCLSQLACICSLIACLLGSEELQETAHIMSCLSNFVYC 267
           F+LQDEFNIQTT+CDNCIIGFM CL Q+ACI S++A ++GSEE+QE + ++SCL++FVYC
Sbjct: 121 FLLQDEFNIQTTQCDNCIIGFMFCLQQIACIFSIVAMIVGSEEIQEASQLLSCLADFVYC 180

Query: 268 TVCACMQTQHKLELDKRDGNFGPQPAMAVPPTQEMSRMTQPVPDPDGYPPPTVSGQPFGY 327
           TVCACMQTQHK+E+DKRDG FGPQP M+VPP Q+MSR+ Q VP   GY P    GQP+GY
Sbjct: 181 TVCACMQTQHKIEMDKRDGKFGPQPVMSVPPVQQMSRIDQQVPPSVGYAPQPAYGQPYGY 240

Query: 328 PP-PPPAQGYPVPAHYQGYPPTGYAP--YPTPG 358
           PP PPP+QGYP P    GYPPTGY P  YP PG
Sbjct: 241 PPAPPPSQGYPAP----GYPPTGYPPAAYPPPG 249

BLAST of CmoCh17G004260 vs. TrEMBL
Match: M0SY08_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.3e-94
Identity = 179/274 (65.33%), Postives = 208/274 (75.91%), Query Frame = 1

Query: 88  MASQADYVDKMQLRQSYRNLWHTDLMGAIAAHPSYCCFSIFWFVEYFDMVFLTIFLDFVK 147
           MASQ +Y+DKMQLRQSYRN+WHTDLM  I A   +CC +++                   
Sbjct: 1   MASQ-EYLDKMQLRQSYRNVWHTDLMSTIQADFPFCCLALW------------------- 60

Query: 148 SGPCVSYLLRKRALYNDMSRYTCCGGYMPCSGKCGESKCPAACLCTEVFCCFTNSVASTR 207
            GPCVSY+LRKRALYNDMSRY CC GY+PCSGKCGE +CP  CLCTEVF CF NSVASTR
Sbjct: 61  CGPCVSYMLRKRALYNDMSRYVCCAGYLPCSGKCGERRCPEFCLCTEVFLCFGNSVASTR 120

Query: 208 FMLQDEFNIQTTECDNCIIGFMLCLSQLACICSLIACLLGSEELQETAHIMSCLSNFVYC 267
           F+LQDEFNIQTT+CDNCIIGFM CL Q+ACI S++A ++GSEE+QE + I+SC+S+FVYC
Sbjct: 121 FLLQDEFNIQTTQCDNCIIGFMFCLQQVACIFSIVAMIVGSEEIQEASQILSCMSDFVYC 180

Query: 268 TVCACMQTQHKLELDKRDGNFGPQPAMAVPPTQEMSRMTQPVPDPDGYPPPTVSGQPFGY 327
           TVCACMQTQHK+E+DKRDG FGP PAMAVPP Q+MSR+ QP+P P GY P    GQP+GY
Sbjct: 181 TVCACMQTQHKVEMDKRDGKFGPPPAMAVPPVQQMSRIDQPIPPPAGYAPQPAYGQPYGY 240

Query: 328 PPPP-PAQGYPVPAHYQG-YPPTGYAPYPTPGQY 360
           PPP  P  GYP PA+  G YPP G   YP PG Y
Sbjct: 241 PPPAYPPTGYP-PAYPPGSYPPAG--SYPPPGSY 251

BLAST of CmoCh17G004260 vs. TrEMBL
Match: F2DM87_HORVD (Predicted protein OS=Hordeum vulgare var. distichum PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.3e-94
Identity = 183/282 (64.89%), Postives = 205/282 (72.70%), Query Frame = 1

Query: 88  MASQADYVDKMQLRQSYRNLWHTDLMGAIAAHPSYCCFSIFWFVEYFDMVFLTIFLDFVK 147
           MAS    ++KMQLRQSYRNLWHTDL  AI A   YCC S++                   
Sbjct: 1   MASSQANLEKMQLRQSYRNLWHTDLPNAIQADFPYCCLSLW------------------- 60

Query: 148 SGPCVSYLLRKRALYNDMSRYTCCGGYMPCSGKCGESKCPAACLCTEVFCCFTNSVASTR 207
            GPCVSY+LRKRALYNDMSRYTCC GYMPCSGKCGES+CP  CL TEVF CF NSVASTR
Sbjct: 61  CGPCVSYMLRKRALYNDMSRYTCCAGYMPCSGKCGESRCPEFCLATEVFLCFGNSVASTR 120

Query: 208 FMLQDEFNIQTTECDNCIIGFMLCLSQLACICSLIACLLGSEELQETAHIMSCLSNFVYC 267
           F+LQDEFNIQTT+CDNCIIGFM CL Q+ACI S++A ++GSEEL E + I+SCLS+ VYC
Sbjct: 121 FLLQDEFNIQTTKCDNCIIGFMFCLQQVACIFSIVAAIVGSEELSEASQILSCLSDMVYC 180

Query: 268 TVCACMQTQHKLELDKRDGNFGPQPAMAVPPTQEMSRMTQPVPDPDGYPPPTVSGQPFGY 327
           +VCACMQTQHK+E+DKRDG FGPQP M VPP Q+MSR+ QPVP P GY P    GQP+G 
Sbjct: 181 SVCACMQTQHKVEMDKRDGKFGPQP-MQVPPMQQMSRIDQPVPPPAGYAPQPAYGQPYGA 240

Query: 328 PPPPPAQGYPVPAHYQGYPPTGYAP----------YPTPGQY 360
            PPPPAQGYP P   QGYPP GY P          YP PG Y
Sbjct: 241 YPPPPAQGYP-PPPAQGYPPAGYPPAGYPQAQGSSYPPPGAY 261

BLAST of CmoCh17G004260 vs. TrEMBL
Match: A0A151TF47_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_011911 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 4.8e-94
Identity = 177/278 (63.67%), Postives = 208/278 (74.82%), Query Frame = 1

Query: 88  MASQADYVDKMQLRQSYRNLWHTDLMGAIAAHPSYCCFSIFWFVEYFDMVFLTIFLDFVK 147
           MASQ ++++KMQ RQ+YRNLWHTDLM  I A   YCCF+++                   
Sbjct: 1   MASQ-EHIEKMQARQNYRNLWHTDLMRTIQADTPYCCFALW------------------- 60

Query: 148 SGPCVSYLLRKRALYNDMSRYTCCGGYMPCSGKCGESKCPAACLCTEVFCCFTNSVASTR 207
             PCVSYLLRKRALY+DMSRYTCC GYMPCSG+CGES+CP  CLCTEVF CF NSVASTR
Sbjct: 61  CAPCVSYLLRKRALYDDMSRYTCCAGYMPCSGRCGESRCPEFCLCTEVFLCFGNSVASTR 120

Query: 208 FMLQDEFNIQTTECDNCIIGFMLCLSQLACICSLIACLLGSEELQETAHIMSCLSNFVYC 267
           F+LQDEFNIQTT+CDNCIIGFM CL Q+ACI S++A ++GS+E+QE + ++SCL++FVYC
Sbjct: 121 FLLQDEFNIQTTQCDNCIIGFMFCLQQIACIFSIVAMIVGSDEIQEASQLLSCLADFVYC 180

Query: 268 TVCACMQTQHKLELDKRDGNFGPQPAMAVPPTQEMSRMTQPVPDPDG------YPPPTVS 327
           TVCACMQTQHK+E+DKRDG FGPQP MAVPP+Q+MSR+ QPVP   G      Y P    
Sbjct: 181 TVCACMQTQHKVEMDKRDGKFGPQPVMAVPPSQQMSRIDQPVPPSVGYAPQPAYAPQPAY 240

Query: 328 GQPFGYPP-PPPAQGYPVPAHYQGYPPTGYAPYPTPGQ 359
           GQP+GYPP PPP QGYP P    GYPP GY P   P Q
Sbjct: 241 GQPYGYPPAPPPTQGYPAP----GYPPAGYPPAAYPPQ 254

BLAST of CmoCh17G004260 vs. TAIR10
Match: AT5G41390.1 (AT5G41390.1 PLAC8 family protein)

HSP 1 Score: 336.3 bits (861), Expect = 2.4e-92
Identity = 177/272 (65.07%), Postives = 199/272 (73.16%), Query Frame = 1

Query: 88  MASQADYVDKMQLRQSYRNLWHTDLMGAIAAHPSYCCFSIFWFVEYFDMVFLTIFLDFVK 147
           MA   D +DKMQLRQSYRNLWH+DLMG ++A   YC FS                     
Sbjct: 1   MARSQDKLDKMQLRQSYRNLWHSDLMGTVSADTPYCFFSCL------------------- 60

Query: 148 SGPCVSYLLRKRALYNDMSRYTCCGGYMPCSGKCGESKCPAACLCTEVFCCFTNSVASTR 207
            GPCVSYLLRKRALYNDMSRYTCCGGYMPCSGKCGESKCP  CL TEV  CF NSVASTR
Sbjct: 61  CGPCVSYLLRKRALYNDMSRYTCCGGYMPCSGKCGESKCPQFCLATEVCLCFGNSVASTR 120

Query: 208 FMLQDEFNIQTTECDNCIIGFMLCLSQLACICSLIACLLGSEELQETAHIMSCLSNFVYC 267
           FMLQDEFNI TT+CDNCIIGFM CL+Q+ACI SL+AC++GS+EL E + ++SCL++ VYC
Sbjct: 121 FMLQDEFNIHTTKCDNCIIGFMFCLNQIACIFSLVACIVGSDELSEASQLLSCLADMVYC 180

Query: 268 TVCACMQTQHKLELDKRDGNFGPQPAMAVPPTQEMSRMTQPVPDPDGYPPPTVSGQPFGY 327
           TVCACMQTQHK+E+DKRDG   PQP M+VPP Q+MSR+ QPVP   GYPP T   Q + Y
Sbjct: 181 TVCACMQTQHKIEMDKRDGLISPQP-MSVPPAQQMSRIDQPVPPYAGYPPATGYPQHY-Y 240

Query: 328 PPP----PPAQGYPVPAHYQGYPPT-GYAPYP 355
           P P    PPA GYP P H  GYPP  GY P P
Sbjct: 241 PQPGHGYPPAPGYPPPGH--GYPPAPGYPPAP 249

BLAST of CmoCh17G004260 vs. TAIR10
Match: AT1G63830.2 (AT1G63830.2 PLAC8 family protein)

HSP 1 Score: 330.1 bits (845), Expect = 1.7e-90
Identity = 169/263 (64.26%), Postives = 192/263 (73.00%), Query Frame = 1

Query: 88  MASQADYVDKMQLRQSYRNLWHTDLMGAIAAHPSYCCFSIFWFVEYFDMVFLTIFLDFVK 147
           MA+  D +DKM+LRQ YRNLWH+DLMG + A   YCC S                     
Sbjct: 1   MAASQDKLDKMKLRQDYRNLWHSDLMGTVTADTPYCCISCL------------------- 60

Query: 148 SGPCVSYLLRKRALYNDMSRYTCCGGYMPCSGKCGESKCPAACLCTEVFCCFTNSVASTR 207
            GPCVSY+LR+RALYNDMSRYTCC GYMPCSG+CGESKCP  CL TEVF CF NSVASTR
Sbjct: 61  CGPCVSYMLRRRALYNDMSRYTCCAGYMPCSGRCGESKCPQLCLATEVFLCFGNSVASTR 120

Query: 208 FMLQDEFNIQTTECDNCIIGFMLCLSQLACICSLIACLLGSEELQETAHIMSCLSNFVYC 267
           F+LQDEFNIQTT+CDNCIIGFM CLSQ+ACI S++AC++GS+EL E + I+SC ++ VYC
Sbjct: 121 FLLQDEFNIQTTQCDNCIIGFMFCLSQVACIFSIVACIVGSDELSEASQILSCCADMVYC 180

Query: 268 TVCACMQTQHKLELDKRDGNFGPQPAMAVPPTQEMSRMTQPVPDPDGYPPPTVSGQPFGY 327
           TVCACMQTQHKLE+DKRDG FG QP M VPP Q+MSR  QPVP P GYP      Q +  
Sbjct: 181 TVCACMQTQHKLEMDKRDGVFGSQP-MGVPPAQQMSRFDQPVPPPVGYP------QSY-- 229

Query: 328 PPPPPAQGYPVPAHYQGYPPTGY 351
             PPPAQGYP PA    YPP GY
Sbjct: 241 --PPPAQGYP-PA---SYPPPGY 229

BLAST of CmoCh17G004260 vs. TAIR10
Match: AT4G23470.1 (AT4G23470.1 PLAC8 family protein)

HSP 1 Score: 314.7 bits (805), Expect = 7.4e-86
Identity = 159/265 (60.00%), Postives = 192/265 (72.45%), Query Frame = 1

Query: 95  VDKMQLRQSYRNLWHTDLMGAIAAHPSYCCFSIFWFVEYFDMVFLTIFLDFVKSGPCVSY 154
           ++KM+LR+++RN+WHTDL  +I     YCCF+++                     PC SY
Sbjct: 6   MEKMELRKNFRNVWHTDLTHSIQNDTPYCCFALW-------------------CAPCASY 65

Query: 155 LLRKRALYNDMSRYTCCGGYMPCSGKCGESKCPAACLCTEVFCCFTNSVASTRFMLQDEF 214
           LLRKRALY+DMSRY CC GYMPCSG+CGE+KCP  CL TEVFCCF NSVASTRF+LQDEF
Sbjct: 66  LLRKRALYDDMSRYVCCAGYMPCSGRCGEAKCPQLCLATEVFCCFANSVASTRFLLQDEF 125

Query: 215 NIQTTECDNCIIGFMLCLSQLACICSLIACLLGSEELQETAHIMSCLSNFVYCTVCACMQ 274
            IQTT+CDNCIIGFM+CLSQ+ACI S++AC++G +EL E + I++C S+ VYCTVCACMQ
Sbjct: 126 QIQTTKCDNCIIGFMVCLSQVACIFSIVACIVGMDELSEASQILTCCSDMVYCTVCACMQ 185

Query: 275 TQHKLELDKRDGNFGPQPAMAVPPTQEMSRMTQPVPDPDGYPPPTVSGQPFGYPPPPPAQ 334
           TQHK+E+DKRDG FGPQP MAVPP Q+MSR  Q  P   GYPP      P GYP  PP Q
Sbjct: 186 TQHKMEMDKRDGKFGPQP-MAVPPAQQMSRFDQATPPAVGYPPQQ-GYPPSGYPQHPP-Q 245

Query: 335 GYPVPAHYQGYPPTGYAPYPTPGQY 360
           GYP   + Q  PP+ Y+ YP PG Y
Sbjct: 246 GYPPSGYPQNPPPSAYSQYP-PGAY 247

BLAST of CmoCh17G004260 vs. NCBI nr
Match: gi|449441622|ref|XP_004138581.1| (PREDICTED: uncharacterized protein LOC101221132 [Cucumis sativus])

HSP 1 Score: 395.2 bits (1014), Expect = 1.2e-106
Identity = 200/287 (69.69%), Postives = 220/287 (76.66%), Query Frame = 1

Query: 88  MASQADYVDKMQLRQSYRNLWHTDLMGAIAAHPSYCCFSIFWFVEYFDMVFLTIFLDFVK 147
           MASQADY+DKMQLRQ+YRN WHTDL G IAA P YCCFS+F                   
Sbjct: 1   MASQADYMDKMQLRQNYRNFWHTDLTGTIAASPPYCCFSVF------------------- 60

Query: 148 SGPCVSYLLRKRALYNDMSRYTCCGGYMPCSGKCGESKCPAACLCTEVFCCFTNSVASTR 207
             PCVSYLLRKRALY+DMSRYTCCGGYMPCSGKCGE  CP ACLCTEVFCCF NSVASTR
Sbjct: 61  CSPCVSYLLRKRALYDDMSRYTCCGGYMPCSGKCGEKHCPEACLCTEVFCCFANSVASTR 120

Query: 208 FMLQDEFNIQTTECDNCIIGFMLCLSQLACICSLIACLLGSEELQETAHIMSCLSNFVYC 267
           FMLQDEFNIQ+TECDNCIIGFMLCLSQLACICS+IACLLGSEELQE + +++CLSN VYC
Sbjct: 121 FMLQDEFNIQSTECDNCIIGFMLCLSQLACICSIIACLLGSEELQEASDLITCLSNLVYC 180

Query: 268 TVCACMQTQHKLELDKRDGNFGPQ-PAMAVPPTQEMSRMTQPVPDP-DGYPPPTVSGQPF 327
           +VCACMQTQHK+E+DKRDG F PQ P MAVP TQ+MSR+ QP+P P  GYPPP V GQPF
Sbjct: 181 SVCACMQTQHKIEMDKRDGKFEPQLPPMAVPLTQQMSRIDQPIPAPVGGYPPPPVYGQPF 240

Query: 328 GYPPPPP---------------AQGYPVPAHYQGYPPTGYAPYPTPG 358
           G+ PPP                AQGYP P  +QGYPP+GY  +P PG
Sbjct: 241 GHLPPPVVQGYPPQPRPTPTHLAQGYPHPPLFQGYPPSGYPQHPPPG 268

BLAST of CmoCh17G004260 vs. NCBI nr
Match: gi|659116650|ref|XP_008458185.1| (PREDICTED: survival motor neuron protein-like isoform X4 [Cucumis melo])

HSP 1 Score: 382.9 bits (982), Expect = 6.3e-103
Identity = 194/290 (66.90%), Postives = 215/290 (74.14%), Query Frame = 1

Query: 88  MASQADYVDKMQLRQSYRNLWHTDLMGAIAAHPSYCCFSIFWFVEYFDMVFLTIFLDFVK 147
           MASQADY++K+ LRQ+YRN+WHTDL G IAA P YCCFS+F                   
Sbjct: 1   MASQADYMEKIHLRQNYRNIWHTDLTGTIAASPPYCCFSLF------------------- 60

Query: 148 SGPCVSYLLRKRALYNDMSRYTCCGGYMPCSGKCGESKCPAACLCTEVFCCFTNSVASTR 207
             P  SYLLRKRALY+DMSRYTCCGGYMPCSGKCGE +CP  CLCTEVFCCF NSVASTR
Sbjct: 61  CAPYASYLLRKRALYDDMSRYTCCGGYMPCSGKCGEKRCPEVCLCTEVFCCFANSVASTR 120

Query: 208 FMLQDEFNIQTTECDNCIIGFMLCLSQLACICSLIACLLGSEELQETAHIMSCLSNFVYC 267
           FMLQDEFNIQTTECDNCII F LCLSQLACICS+IACLLGSEEL+E + +++CLSN VYC
Sbjct: 121 FMLQDEFNIQTTECDNCIIAFTLCLSQLACICSIIACLLGSEELREASDLLTCLSNLVYC 180

Query: 268 TVCACMQTQHKLELDKRDGNFGPQ-PAMAVPPTQEMSRMTQPVPDP-DGYPPPTVSGQPF 327
           +VCACMQTQHKLELDKRDG FGPQ P MA P TQ+MSR+ QP+P    GYPPP V GQPF
Sbjct: 181 SVCACMQTQHKLELDKRDGKFGPQPPPMAAPLTQQMSRIVQPIPAAVGGYPPPPVYGQPF 240

Query: 328 GYPPPPPAQGYP----------------VPAHYQGYPPTGYAPYPTPGQY 360
           G+ PPP  QGYP                 P  +QGYP  GY P+P PGQY
Sbjct: 241 GHLPPPVVQGYPPALPPPPAPHLAQGYQPPPPFQGYPQPGYPPHPPPGQY 271

BLAST of CmoCh17G004260 vs. NCBI nr
Match: gi|965656630|dbj|BAT73049.1| (hypothetical protein VIGAN_01050600 [Vigna angularis var. angularis])

HSP 1 Score: 361.3 bits (926), Expect = 2.0e-96
Identity = 179/273 (65.57%), Postives = 210/273 (76.92%), Query Frame = 1

Query: 88  MASQADYVDKMQLRQSYRNLWHTDLMGAIAAHPSYCCFSIFWFVEYFDMVFLTIFLDFVK 147
           MASQ ++++KMQ RQ++RNLWHTDLM  I A   YCCF+++                   
Sbjct: 1   MASQ-EHIEKMQARQNFRNLWHTDLMRTIQADTPYCCFALW------------------- 60

Query: 148 SGPCVSYLLRKRALYNDMSRYTCCGGYMPCSGKCGESKCPAACLCTEVFCCFTNSVASTR 207
             PCVSYLLRKRALY+DMSRYTCC GYMPCSG+CGESKCP  CLCTEVF CF NSVASTR
Sbjct: 61  CAPCVSYLLRKRALYDDMSRYTCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTR 120

Query: 208 FMLQDEFNIQTTECDNCIIGFMLCLSQLACICSLIACLLGSEELQETAHIMSCLSNFVYC 267
           F+LQDEFNIQTT+CDNCIIGFM CL Q+ACI S++A ++GSEE+QE + ++SCL++FVYC
Sbjct: 121 FLLQDEFNIQTTQCDNCIIGFMFCLQQIACIFSIVAMIVGSEEIQEASQLLSCLADFVYC 180

Query: 268 TVCACMQTQHKLELDKRDGNFGPQPAMAVPPTQEMSRMTQPVPDPDGYPPPTVSGQPFGY 327
           TVCACMQTQHK+E+DKRDG FGPQP M+VPP Q+MSR+ Q VP   GY P    GQP+GY
Sbjct: 181 TVCACMQTQHKIEMDKRDGKFGPQPVMSVPPVQQMSRIDQQVPPSVGYAPQPAYGQPYGY 240

Query: 328 PP-PPPAQGYPVPAHYQGYPPTGYAP--YPTPG 358
           PP PPP+QGYP P    GYPPTGY P  YP PG
Sbjct: 241 PPAPPPSQGYPAP----GYPPTGYPPAAYPPPG 249

BLAST of CmoCh17G004260 vs. NCBI nr
Match: gi|695025869|ref|XP_009400203.1| (PREDICTED: protein shisa-4-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 354.8 bits (909), Expect = 1.8e-94
Identity = 179/274 (65.33%), Postives = 208/274 (75.91%), Query Frame = 1

Query: 88  MASQADYVDKMQLRQSYRNLWHTDLMGAIAAHPSYCCFSIFWFVEYFDMVFLTIFLDFVK 147
           MASQ +Y+DKMQLRQSYRN+WHTDLM  I A   +CC +++                   
Sbjct: 1   MASQ-EYLDKMQLRQSYRNVWHTDLMSTIQADFPFCCLALW------------------- 60

Query: 148 SGPCVSYLLRKRALYNDMSRYTCCGGYMPCSGKCGESKCPAACLCTEVFCCFTNSVASTR 207
            GPCVSY+LRKRALYNDMSRY CC GY+PCSGKCGE +CP  CLCTEVF CF NSVASTR
Sbjct: 61  CGPCVSYMLRKRALYNDMSRYVCCAGYLPCSGKCGERRCPEFCLCTEVFLCFGNSVASTR 120

Query: 208 FMLQDEFNIQTTECDNCIIGFMLCLSQLACICSLIACLLGSEELQETAHIMSCLSNFVYC 267
           F+LQDEFNIQTT+CDNCIIGFM CL Q+ACI S++A ++GSEE+QE + I+SC+S+FVYC
Sbjct: 121 FLLQDEFNIQTTQCDNCIIGFMFCLQQVACIFSIVAMIVGSEEIQEASQILSCMSDFVYC 180

Query: 268 TVCACMQTQHKLELDKRDGNFGPQPAMAVPPTQEMSRMTQPVPDPDGYPPPTVSGQPFGY 327
           TVCACMQTQHK+E+DKRDG FGP PAMAVPP Q+MSR+ QP+P P GY P    GQP+GY
Sbjct: 181 TVCACMQTQHKVEMDKRDGKFGPPPAMAVPPVQQMSRIDQPIPPPAGYAPQPAYGQPYGY 240

Query: 328 PPPP-PAQGYPVPAHYQG-YPPTGYAPYPTPGQY 360
           PPP  P  GYP PA+  G YPP G   YP PG Y
Sbjct: 241 PPPAYPPTGYP-PAYPPGSYPPAG--SYPPPGSY 251

BLAST of CmoCh17G004260 vs. NCBI nr
Match: gi|326502868|dbj|BAJ99062.1| (predicted protein [Hordeum vulgare subsp. vulgare])

HSP 1 Score: 354.8 bits (909), Expect = 1.8e-94
Identity = 183/282 (64.89%), Postives = 205/282 (72.70%), Query Frame = 1

Query: 88  MASQADYVDKMQLRQSYRNLWHTDLMGAIAAHPSYCCFSIFWFVEYFDMVFLTIFLDFVK 147
           MAS    ++KMQLRQSYRNLWHTDL  AI A   YCC S++                   
Sbjct: 1   MASSQANLEKMQLRQSYRNLWHTDLPNAIQADFPYCCLSLW------------------- 60

Query: 148 SGPCVSYLLRKRALYNDMSRYTCCGGYMPCSGKCGESKCPAACLCTEVFCCFTNSVASTR 207
            GPCVSY+LRKRALYNDMSRYTCC GYMPCSGKCGES+CP  CL TEVF CF NSVASTR
Sbjct: 61  CGPCVSYMLRKRALYNDMSRYTCCAGYMPCSGKCGESRCPEFCLATEVFLCFGNSVASTR 120

Query: 208 FMLQDEFNIQTTECDNCIIGFMLCLSQLACICSLIACLLGSEELQETAHIMSCLSNFVYC 267
           F+LQDEFNIQTT+CDNCIIGFM CL Q+ACI S++A ++GSEEL E + I+SCLS+ VYC
Sbjct: 121 FLLQDEFNIQTTKCDNCIIGFMFCLQQVACIFSIVAAIVGSEELSEASQILSCLSDMVYC 180

Query: 268 TVCACMQTQHKLELDKRDGNFGPQPAMAVPPTQEMSRMTQPVPDPDGYPPPTVSGQPFGY 327
           +VCACMQTQHK+E+DKRDG FGPQP M VPP Q+MSR+ QPVP P GY P    GQP+G 
Sbjct: 181 SVCACMQTQHKVEMDKRDGKFGPQP-MQVPPMQQMSRIDQPVPPPAGYAPQPAYGQPYGA 240

Query: 328 PPPPPAQGYPVPAHYQGYPPTGYAP----------YPTPGQY 360
            PPPPAQGYP P   QGYPP GY P          YP PG Y
Sbjct: 241 YPPPPAQGYP-PPPAQGYPPAGYPPAGYPQAQGSSYPPPGAY 261

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KBB6_CUCSA8.5e-10769.69Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006690 PE=4 SV=1[more]
A0A0S3QXK5_PHAAN1.4e-9665.57Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G050600 PE=... [more]
M0SY08_MUSAM1.3e-9465.33Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1[more]
F2DM87_HORVD1.3e-9464.89Predicted protein OS=Hordeum vulgare var. distichum PE=2 SV=1[more]
A0A151TF47_CAJCA4.8e-9463.67Uncharacterized protein OS=Cajanus cajan GN=KK1_011911 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G41390.12.4e-9265.07 PLAC8 family protein[more]
AT1G63830.21.7e-9064.26 PLAC8 family protein[more]
AT4G23470.17.4e-8660.00 PLAC8 family protein[more]
Match NameE-valueIdentityDescription
gi|449441622|ref|XP_004138581.1|1.2e-10669.69PREDICTED: uncharacterized protein LOC101221132 [Cucumis sativus][more]
gi|659116650|ref|XP_008458185.1|6.3e-10366.90PREDICTED: survival motor neuron protein-like isoform X4 [Cucumis melo][more]
gi|965656630|dbj|BAT73049.1|2.0e-9665.57hypothetical protein VIGAN_01050600 [Vigna angularis var. angularis][more]
gi|695025869|ref|XP_009400203.1|1.8e-9465.33PREDICTED: protein shisa-4-like [Musa acuminata subsp. malaccensis][more]
gi|326502868|dbj|BAJ99062.1|1.8e-9464.89predicted protein [Hordeum vulgare subsp. vulgare][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G004260.1CmoCh17G004260.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31152FAMILY NOT NAMEDcoord: 64..128
score: 1.3E-136coord: 148..359
score: 1.3E
NoneNo IPR availablePANTHERPTHR31152:SF3SUBFAMILY NOT NAMEDcoord: 148..359
score: 1.3E-136coord: 64..128
score: 1.3E

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh17G004260CmoCh08G008680Cucurbita moschata (Rifu)cmocmoB321
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh17G004260Cucumber (Gy14) v1cgycmoB0828
CmoCh17G004260Cucurbita maxima (Rimu)cmacmoB353
CmoCh17G004260Melon (DHL92) v3.5.1cmomeB305
CmoCh17G004260Watermelon (Charleston Gray)cmowcgB311
CmoCh17G004260Watermelon (97103) v1cmowmB343
CmoCh17G004260Watermelon (97103) v1cmowmB346
CmoCh17G004260Cucumber (Gy14) v2cgybcmoB599
CmoCh17G004260Melon (DHL92) v3.6.1cmomedB350
CmoCh17G004260Cucurbita moschata (Rifu)cmocmoB240