CmoCh17G000260 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh17G000260
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionEarly nodulin-55-2
LocationCmo_Chr17 : 124963 .. 126058 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAGTCAAATATAAAAAAGCACTCCAAGTCCGAATTTTCTCACCACAGCTGTATCATTTCTCACATTCAGACACTCCAACATCGATGGCGGTGGAGACGGCAGCGTTCACGGCGGTCGTCGCTCTCTTGATCACGGCGGCGGCATCTCAAACCCCTCCGACGGCTTATTCTAATCACACAGTCGGTGGCCCTGCAGGTTGGTTCTTCAACGCCACCAAGAACATTTCCGCTACCAATTACTCCTCCTGGGCCGCGTCTCAGACTTTCAACCTCGGCGACTTCCTGAGTAAGCTCAATCTCTCCTCCTCCTCCTTTAGGTTATGTTCTTAACTCATTCCTGAGGGTTGATTACTCTCTGAAATATCCGTTCGTCGTTGTTTGTTTCTTAACCCATTCCTGAGAGTTGAATACAGGTATTGCTCTCTCTTATCAATCAATTAACTAACAGAACTTCATTGTCATTGTTTCGCTGCTCTTGTTAATTGCAGTCTTCAGAACGAATTCGAATCAGACCGTGATCCAGACCTACAACTTGACGACATTCCAGAGCTGCTCCTTCGACGATGCCTCCGATAACGACACGGTTCAGTACAATGGCGGAGATACCGACTTCAACAAGCCATTGATCATTCAAGTACCACTGACCATCAAAGGTTCGAACTACTTCTTCTCCGACGCCAATGACGGAGTTCAATGTCAAGAAGGTATGGCCTTCGAGATCCAGGTCAATACCGGGCTCGGTTTGCCGCCAAGCCTGAATCAGCCGCCTCCACCTCCTTATGCGACGCCGCCGGATTCCAATTCGGCTCAGATGCCTCCATTGATGATTCCTCAAACGAAGGACAACGGCAGCTCCAAAACCATCGCTAACTCACGCCGAGAGTTATTCTTCATCGCGGTGATGGTGTTGCTGCTACTCTGCTAGACGACCGAGGTCAGATTCGAGAACACAGGCTTCCCTCCCTGTCATCTGTGTGGCAGCTTTGGAATATATAGATATATACATATATATATATATATATACCTAAACAGTTGAGTTTTGTACTTCCAGTTCATTGATATCAATAGAGACGTGATTATATTAAAGAGTCTGAGT

mRNA sequence

CCAGTCAAATATAAAAAAGCACTCCAAGTCCGAATTTTCTCACCACAGCTGTATCATTTCTCACATTCAGACACTCCAACATCGATGGCGGTGGAGACGGCAGCGTTCACGGCGGTCGTCGCTCTCTTGATCACGGCGGCGGCATCTCAAACCCCTCCGACGGCTTATTCTAATCACACAGTCGGTGGCCCTGCAGGTTGGTTCTTCAACGCCACCAAGAACATTTCCGCTACCAATTACTCCTCCTGGGCCGCGTCTCAGACTTTCAACCTCGGCGACTTCCTGATCTTCAGAACGAATTCGAATCAGACCGTGATCCAGACCTACAACTTGACGACATTCCAGAGCTGCTCCTTCGACGATGCCTCCGATAACGACACGGTTCAGTACAATGGCGGAGATACCGACTTCAACAAGCCATTGATCATTCAAGTACCACTGACCATCAAAGGTTCGAACTACTTCTTCTCCGACGCCAATGACGGAGTTCAATGTCAAGAAGGTATGGCCTTCGAGATCCAGGTCAATACCGGGCTCGGTTTGCCGCCAAGCCTGAATCAGCCGCCTCCACCTCCTTATGCGACGCCGCCGGATTCCAATTCGGCTCAGATGCCTCCATTGATGATTCCTCAAACGAAGGACAACGGCAGCTCCAAAACCATCGCTAACTCACGCCGAGAGTTATTCTTCATCGCGGTGATGGTGTTGCTGCTACTCTGCTAGACGACCGAGGTCAGATTCGAGAACACAGGCTTCCCTCCCTGTCATCTGTGTGGCAGCTTTGGAATATATAGATATATACATATATATATATATATATACCTAAACAGTTGAGTTTTGTACTTCCAGTTCATTGATATCAATAGAGACGTGATTATATTAAAGAGTCTGAGT

Coding sequence (CDS)

ATGGCGGTGGAGACGGCAGCGTTCACGGCGGTCGTCGCTCTCTTGATCACGGCGGCGGCATCTCAAACCCCTCCGACGGCTTATTCTAATCACACAGTCGGTGGCCCTGCAGGTTGGTTCTTCAACGCCACCAAGAACATTTCCGCTACCAATTACTCCTCCTGGGCCGCGTCTCAGACTTTCAACCTCGGCGACTTCCTGATCTTCAGAACGAATTCGAATCAGACCGTGATCCAGACCTACAACTTGACGACATTCCAGAGCTGCTCCTTCGACGATGCCTCCGATAACGACACGGTTCAGTACAATGGCGGAGATACCGACTTCAACAAGCCATTGATCATTCAAGTACCACTGACCATCAAAGGTTCGAACTACTTCTTCTCCGACGCCAATGACGGAGTTCAATGTCAAGAAGGTATGGCCTTCGAGATCCAGGTCAATACCGGGCTCGGTTTGCCGCCAAGCCTGAATCAGCCGCCTCCACCTCCTTATGCGACGCCGCCGGATTCCAATTCGGCTCAGATGCCTCCATTGATGATTCCTCAAACGAAGGACAACGGCAGCTCCAAAACCATCGCTAACTCACGCCGAGAGTTATTCTTCATCGCGGTGATGGTGTTGCTGCTACTCTGCTAG
Homology
[Close]
BLAST of CmoCh17G000260 vs. TrEMBL
Match: A0A0A0K8Z1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G076780 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 8.6e-91
Identity = 173/212 (81.60%), Postives = 190/212 (89.62%), Query Frame = 1 

Query: 1   MAVETAAFTAVVALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISATNYSSWAASQT 60
           MA ETAAFTA+ ALLITA ASQTPPTAY+N+TVGGPAGWFFNAT NIS TNYSSWAASQT
Sbjct: 1   MAPETAAFTALFALLITAVASQTPPTAYTNYTVGGPAGWFFNATNNISTTNYSSWAASQT 60

Query: 61  FNLGDFLIFRTNSNQTVIQTYNLTTFQSCSFDDASDNDTVQYNGGDTDFNKPLIIQVPLT 120
           FNLGDFLIFRTNSNQTVIQTYNLTTF SCSFDDASDNDTVQY GGD++FNKPL+I VPLT
Sbjct: 61  FNLGDFLIFRTNSNQTVIQTYNLTTFNSCSFDDASDNDTVQYYGGDSNFNKPLVIPVPLT 120

Query: 121 IKGSNYFFSDANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSAQMPPLM 180
           IKG NYFFSDA+DGVQCQ GMAFEI+VNTGLGLPPSLNQPPPPPYATPPDS+S+Q PP  
Sbjct: 121 IKGPNYFFSDADDGVQCQRGMAFEIEVNTGLGLPPSLNQPPPPPYATPPDSDSSQTPPFT 180

Query: 181 IP-QTKDNGSSKTIANSRRELFFIAVMVLLLL 212
           IP +TK NG  K++AN R++LFF  + V+ LL
Sbjct: 181 IPDETKKNGGFKSVANLRQDLFFFFMAVIPLL 212

[Close]
BLAST of CmoCh17G000260 vs. TrEMBL
Match: U5GPR1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15180g PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 6.2e-65
Identity = 129/182 (70.88%), Postives = 147/182 (80.77%), Query Frame = 1 

Query: 1   MAVETAAFTAVVALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISATNYSSWAASQT 60
           M + T    A++A+LITAA SQ PP  Y NHTVG  AGWFFN+T N +A NYSSWAASQT
Sbjct: 1   MRLATILHLAIIAVLITAATSQAPPIRYINHTVGDNAGWFFNSTTNTTAANYSSWAASQT 60

Query: 61  FNLGDFLIFRTNSNQTVIQTYNLTTFQSCSFDDASDNDTVQYNGGDTDFNKPLIIQVPLT 120
           FNLGD+LIFRT+SNQTVIQTYNLTTF+ CS D +SDNDTV YNGG+T F++ L I VPLT
Sbjct: 61  FNLGDYLIFRTSSNQTVIQTYNLTTFKDCSIDHSSDNDTVVYNGGNTVFDQALTIPVPLT 120

Query: 121 IKGSNYFFSDANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSAQMPPLM 180
           I+G NYFFSDANDG+QCQ G+AFEI VN GLGLPPSLNQPPPPPY  PP  +SA  PP+ 
Sbjct: 121 IQGPNYFFSDANDGIQCQYGLAFEINVNRGLGLPPSLNQPPPPPYREPPGPDSAS-PPIT 180

Query: 181 IP 183
           IP
Sbjct: 181 IP 181

[Close]
BLAST of CmoCh17G000260 vs. TrEMBL
Match: A0A067H215_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027953mg PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 6.9e-64
Identity = 131/205 (63.90%), Postives = 156/205 (76.10%), Query Frame = 1 

Query: 11  VVALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISATNYSSWAASQTFNLGDFLIFR 70
           V+ALLIT  AS TP TAY+NHTVGGPAGW F+A  NISATNYSSWAA+QT+NLGD+LIF 
Sbjct: 10  VIALLITVVASDTPATAYTNHTVGGPAGWSFDAINNISATNYSSWAANQTYNLGDYLIFN 69

Query: 71  TNSNQTVIQTYNLTTFQSCSFDDASDNDTVQYNGGDTDFNKPLIIQVPLTIKGSNYFFSD 130
           TN+NQTVIQTYN TTF SC+ DDASD+DT  YNGG  +F + + I VPLT  G+NYFFSD
Sbjct: 70  TNTNQTVIQTYNETTFSSCTTDDASDDDTFHYNGGGNEFGQNVTIAVPLTTTGTNYFFSD 129

Query: 131 ANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSAQMPPLMI----PQTKD 190
           A DG+QCQ G+AFEI VN GLGLPPSLNQPPPPPY  PP   ++QM P+ I    P+  D
Sbjct: 130 AEDGLQCQRGVAFEISVNRGLGLPPSLNQPPPPPYIEPPGPETSQMTPVNINGGSPEI-D 189

Query: 191 NGSSKTIANSRRELFFIAVMVLLLL 212
           N + +++AN R  L  + + V  LL
Sbjct: 190 NSALRSVANMRFLLSPLLIGVTSLL 213

[Close]
BLAST of CmoCh17G000260 vs. TrEMBL
Match: V4TDP0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022194mg PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 6.9e-64
Identity = 131/205 (63.90%), Postives = 156/205 (76.10%), Query Frame = 1 

Query: 11  VVALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISATNYSSWAASQTFNLGDFLIFR 70
           V+ALLIT  AS TP TAY+NHTVGGPAGW F+A  NISATNYSSWAA+QT+NLGD+LIF 
Sbjct: 10  VIALLITVVASDTPATAYTNHTVGGPAGWSFDAINNISATNYSSWAANQTYNLGDYLIFN 69

Query: 71  TNSNQTVIQTYNLTTFQSCSFDDASDNDTVQYNGGDTDFNKPLIIQVPLTIKGSNYFFSD 130
           TN+NQTVIQTYN TTF SC+ DDASD+DT  YNGG  +F + + I VPLT  G+NYFFSD
Sbjct: 70  TNTNQTVIQTYNETTFSSCTTDDASDDDTFHYNGGGNEFGQNVTIAVPLTTTGTNYFFSD 129

Query: 131 ANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSAQMPPLMI----PQTKD 190
           A DG+QCQ G+AFEI VN GLGLPPSLNQPPPPPY  PP   ++QM P+ I    P+  D
Sbjct: 130 AEDGLQCQRGVAFEISVNRGLGLPPSLNQPPPPPYIEPPGPETSQMTPVNINGGSPEI-D 189

Query: 191 NGSSKTIANSRRELFFIAVMVLLLL 212
           N + +++AN R  L  + + V  LL
Sbjct: 190 NSALRSVANMRFLLSPLLIGVTSLL 213

[Close]
BLAST of CmoCh17G000260 vs. TrEMBL
Match: A0A067K8Z9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14496 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 6.4e-62
Identity = 137/217 (63.13%), Postives = 158/217 (72.81%), Query Frame = 1 

Query: 1   MAVETAAFTAVVALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNIS-ATNYSSWAASQ 60
           M   T     + AL+I AAASQT PTAY+NHTVGG AGWFFN+T N + A NYSSWAA+Q
Sbjct: 1   MTAATFMRVTITALMIAAAASQTRPTAYTNHTVGGNAGWFFNSTTNTAAAANYSSWAAAQ 60

Query: 61  TFNLGDFLIFRTNSNQTVIQTYNLTTFQSCSFDDASDNDTVQYNGGDTDFNKPLIIQVPL 120
           TFNLGDFLIF TNSNQTVIQTYN +TF+SC+ DDA D+DT Q+ GG T F + L I V L
Sbjct: 61  TFNLGDFLIFNTNSNQTVIQTYNESTFRSCTTDDALDSDTFQFGGGSTAFGEALTIPVAL 120

Query: 121 TIKGSNYFFSDANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSAQMPPL 180
           TI+G NYFFSDA+DG QCQ G+AFEIQVN GLGLPPSLNQPPPPPY  PP  +SAQ PP+
Sbjct: 121 TIEGPNYFFSDADDGSQCQHGLAFEIQVNHGLGLPPSLNQPPPPPYIEPPGPDSAQPPPI 180

Query: 181 MI---PQTKDNGSSKTIANSRR----ELFFIAVMVLL 210
            I    +T  N   K  A+ RR     LF +A + LL
Sbjct: 181 TIAGGSETPLNYGVKDGADMRRVACAVLFAVAGVTLL 217

[Close]
BLAST of CmoCh17G000260 vs. TAIR10
Match: AT1G08500.1 (AT1G08500.1 early nodulin-like protein 18)

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-27
Identity = 71/182 (39.01%), Postives = 101/182 (55.49%), Query Frame = 1 

Query: 27  AYSNHTVGGPAGWFFNATKNISATNYSSWAASQTFNLGDFLIFRTNSNQTVIQTYNLTTF 86
           AY N+TVG   GWF    +   + NY  WA S++F+LGDFLIF T+SN +V+QTY+  T+
Sbjct: 26  AYKNYTVGESTGWF--DIQERPSANYQKWADSKSFSLGDFLIFNTDSNHSVVQTYDFKTY 85

Query: 87  QSCSFDDASDNDTVQYNGGDTDFNK--PLIIQVPLTIKGSNYFFSDANDGVQCQEGMAFE 146
           + C +D+  +NDT +++  +       P+ I VPL  +GSNYFFS   DG QC+ G  F 
Sbjct: 86  KDCDYDNNENNDTTEWSAANPSATSPVPVSISVPLVKEGSNYFFSGNYDGEQCKFGQHFM 145

Query: 147 IQVNTGLGLPPSLNQPPPPPYATPPDSNSAQ------MPPLMIPQTKDNGSSKTIANSRR 201
           I V  G GLP S +   P   A P  S S+Q       P  ++P   D+      A+  +
Sbjct: 146 INVTHGQGLPDSSS---PDDAAAPGPSESSQSGDDEVAPDTIVPANFDHPKDIESADDDK 202

[Close]
BLAST of CmoCh17G000260 vs. TAIR10
Match: AT3G20570.1 (AT3G20570.1 early nodulin-like protein 9)

HSP 1 Score: 52.4 bits (124), Expect = 4.0e-07
Identity = 49/181 (27.07%), Postives = 72/181 (39.78%), Query Frame = 1 

Query: 32  TVGGPAGWFFNATKNISATNYSSWAASQTFNLGDFLIFRTNSNQTVIQTYNLTTFQSCSF 91
           TVGG  GW   +   +    YS WA    F +GD L+F   SNQ  +       + SC+ 
Sbjct: 31  TVGGATGWTVPSGSQV----YSQWAEQSRFQIGDSLLFVYQSNQDSVLQVTRDAYDSCN- 90

Query: 92  DDASDNDTVQYNGGDTDFNKPLIIQVPLTIKGSNYFFSDANDGVQCQEGMAFEIQVNTGL 151
              +D+ T ++  G T         V L   G  YF S   D  +  E +   +  +   
Sbjct: 91  ---TDSPTAKFADGKT--------SVTLNHSGPYYFISGNKDNCKKNEKLVVIVMADRS- 150

Query: 152 GLPPSLNQPPPPPYATPPDSNSAQMPPL-----MIPQTKDNGSSKTIANSRRELFFIAVM 208
           G   + + PP P  A  P   SA  PP+     M P      S  T  ++   L F+A +
Sbjct: 151 GNKNTASSPPSP--APAPSGESAPSPPVSGTFEMTPAPTPTTSEDTPNSAASSLSFVAAL 192

[Close]
BLAST of CmoCh17G000260 vs. TAIR10
Match: AT2G44790.1 (AT2G44790.1 uclacyanin 2)

HSP 1 Score: 48.1 bits (113), Expect = 7.6e-06
Identity = 36/131 (27.48%), Postives = 57/131 (43.51%), Query Frame = 1 

Query: 48  SATNYSSWAASQTFNLGDFLIFRTNSNQTVIQTYNLTTFQSCSFDDASDNDTVQYNGGDT 107
           +  +YS WA  +TF +GD L F+  S+ TV    +   +  C    +++N    ++ GDT
Sbjct: 38  TGVDYSGWATGKTFRVGDILEFKYGSSHTV-DVVDKAGYDGCDASSSTEN----HSDGDT 97

Query: 108 DFNKPLIIQVPLTIKGSNYFFSDANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYAT 167
                   ++ L   G NYF        +   GM   + V  G   PP+    P PP +T
Sbjct: 98  --------KIDLKTVGINYFICSTPGHCRTNGGMKLAVNVVAGSAGPPA---TPTPPSST 152

Query: 168 PPDSNSAQMPP 179
           P    + + PP
Sbjct: 158 PGTPTTPESPP 152

[Close]
BLAST of CmoCh17G000260 vs. NCBI nr
Match: gi|659120325|ref|XP_008460134.1| (PREDICTED: blue copper protein-like [Cucumis melo])

HSP 1 Score: 345.5 bits (885), Expect = 6.5e-92
Identity = 175/213 (82.16%), Postives = 188/213 (88.26%), Query Frame = 1 

Query: 1   MAVETAAFTAVVALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISATNYSSWAASQT 60
           MA ETAAF+A  ALLIT  ASQTPPTAY+NHTVGGPAGWFFNAT NIS TNYSSWAASQT
Sbjct: 1   MAAETAAFSAFFALLITMVASQTPPTAYTNHTVGGPAGWFFNATNNISTTNYSSWAASQT 60

Query: 61  FNLGDFLIFRTNSNQTVIQTYNLTTFQSCSFDDASDNDTVQYNGGDTDFNKPLIIQVPLT 120
           FNLGDFLIFRTNSNQTVIQTYNLTTF SCSFDDASDNDTVQY GGD++FNKPL+I VPLT
Sbjct: 61  FNLGDFLIFRTNSNQTVIQTYNLTTFNSCSFDDASDNDTVQYYGGDSNFNKPLVIPVPLT 120

Query: 121 IKGSNYFFSDANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSAQMPPLM 180
           IKG NYFFSDA+DGVQCQ GMAFEIQVNTGLGLPPSLNQPPPPPYATPPDS S+Q PP  
Sbjct: 121 IKGPNYFFSDADDGVQCQRGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSESSQTPPFT 180

Query: 181 IPQTKDNGSSKTIANSRREL----FFIAVMVLL 210
           IP+TK NG  K++AN RR+L    FF+A+M LL
Sbjct: 181 IPETKKNGGFKSVANLRRDLFFFFFFMAMMPLL 213

[Close]
BLAST of CmoCh17G000260 vs. NCBI nr
Match: gi|449454510|ref|XP_004144997.1| (PREDICTED: blue copper protein-like [Cucumis sativus])

HSP 1 Score: 341.3 bits (874), Expect = 1.2e-90
Identity = 173/212 (81.60%), Postives = 190/212 (89.62%), Query Frame = 1 

Query: 1   MAVETAAFTAVVALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISATNYSSWAASQT 60
           MA ETAAFTA+ ALLITA ASQTPPTAY+N+TVGGPAGWFFNAT NIS TNYSSWAASQT
Sbjct: 1   MAPETAAFTALFALLITAVASQTPPTAYTNYTVGGPAGWFFNATNNISTTNYSSWAASQT 60

Query: 61  FNLGDFLIFRTNSNQTVIQTYNLTTFQSCSFDDASDNDTVQYNGGDTDFNKPLIIQVPLT 120
           FNLGDFLIFRTNSNQTVIQTYNLTTF SCSFDDASDNDTVQY GGD++FNKPL+I VPLT
Sbjct: 61  FNLGDFLIFRTNSNQTVIQTYNLTTFNSCSFDDASDNDTVQYYGGDSNFNKPLVIPVPLT 120

Query: 121 IKGSNYFFSDANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSAQMPPLM 180
           IKG NYFFSDA+DGVQCQ GMAFEI+VNTGLGLPPSLNQPPPPPYATPPDS+S+Q PP  
Sbjct: 121 IKGPNYFFSDADDGVQCQRGMAFEIEVNTGLGLPPSLNQPPPPPYATPPDSDSSQTPPFT 180

Query: 181 IP-QTKDNGSSKTIANSRRELFFIAVMVLLLL 212
           IP +TK NG  K++AN R++LFF  + V+ LL
Sbjct: 181 IPDETKKNGGFKSVANLRQDLFFFFMAVIPLL 212

[Close]
BLAST of CmoCh17G000260 vs. NCBI nr
Match: gi|566158148|ref|XP_006386579.1| (hypothetical protein POPTR_0002s15180g [Populus trichocarpa])

HSP 1 Score: 255.4 bits (651), Expect = 8.9e-65
Identity = 129/182 (70.88%), Postives = 147/182 (80.77%), Query Frame = 1 

Query: 1   MAVETAAFTAVVALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISATNYSSWAASQT 60
           M + T    A++A+LITAA SQ PP  Y NHTVG  AGWFFN+T N +A NYSSWAASQT
Sbjct: 1   MRLATILHLAIIAVLITAATSQAPPIRYINHTVGDNAGWFFNSTTNTTAANYSSWAASQT 60

Query: 61  FNLGDFLIFRTNSNQTVIQTYNLTTFQSCSFDDASDNDTVQYNGGDTDFNKPLIIQVPLT 120
           FNLGD+LIFRT+SNQTVIQTYNLTTF+ CS D +SDNDTV YNGG+T F++ L I VPLT
Sbjct: 61  FNLGDYLIFRTSSNQTVIQTYNLTTFKDCSIDHSSDNDTVVYNGGNTVFDQALTIPVPLT 120

Query: 121 IKGSNYFFSDANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSAQMPPLM 180
           I+G NYFFSDANDG+QCQ G+AFEI VN GLGLPPSLNQPPPPPY  PP  +SA  PP+ 
Sbjct: 121 IQGPNYFFSDANDGIQCQYGLAFEINVNRGLGLPPSLNQPPPPPYREPPGPDSAS-PPIT 180

Query: 181 IP 183
           IP
Sbjct: 181 IP 181

[Close]
BLAST of CmoCh17G000260 vs. NCBI nr
Match: gi|743916242|ref|XP_011002095.1| (PREDICTED: cucumber peeling cupredoxin-like [Populus euphratica])

HSP 1 Score: 253.4 bits (646), Expect = 3.4e-64
Identity = 127/182 (69.78%), Postives = 147/182 (80.77%), Query Frame = 1 

Query: 1   MAVETAAFTAVVALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISATNYSSWAASQT 60
           M + T    A++A+LITAA SQ PP  Y NHTVG  AGWFFN+T N + TNYSSWAASQT
Sbjct: 1   MRLATILHLAIIAVLITAATSQAPPIRYINHTVGDNAGWFFNSTTNTTVTNYSSWAASQT 60

Query: 61  FNLGDFLIFRTNSNQTVIQTYNLTTFQSCSFDDASDNDTVQYNGGDTDFNKPLIIQVPLT 120
           FNLGD+LIFRT+SNQTVIQTYNLTTF++CS D +SDNDT  YNGG+T F++ L I VPLT
Sbjct: 61  FNLGDYLIFRTSSNQTVIQTYNLTTFKNCSIDHSSDNDTFVYNGGNTVFDQALTIPVPLT 120

Query: 121 IKGSNYFFSDANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSAQMPPLM 180
           I+G NYFFSDANDG+QCQ G+AFEI +N GLGLPPSLNQPPPPPY  PP  +SA  PP+ 
Sbjct: 121 IQGPNYFFSDANDGIQCQFGLAFEININRGLGLPPSLNQPPPPPYREPPGPDSAS-PPIT 180

Query: 181 IP 183
           IP
Sbjct: 181 IP 181

[Close]
BLAST of CmoCh17G000260 vs. NCBI nr
Match: gi|567905450|ref|XP_006445213.1| (hypothetical protein CICLE_v10022194mg [Citrus clementina])

HSP 1 Score: 251.9 bits (642), Expect = 9.8e-64
Identity = 131/205 (63.90%), Postives = 156/205 (76.10%), Query Frame = 1 

Query: 11  VVALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISATNYSSWAASQTFNLGDFLIFR 70
           V+ALLIT  AS TP TAY+NHTVGGPAGW F+A  NISATNYSSWAA+QT+NLGD+LIF 
Sbjct: 10  VIALLITVVASDTPATAYTNHTVGGPAGWSFDAINNISATNYSSWAANQTYNLGDYLIFN 69

Query: 71  TNSNQTVIQTYNLTTFQSCSFDDASDNDTVQYNGGDTDFNKPLIIQVPLTIKGSNYFFSD 130
           TN+NQTVIQTYN TTF SC+ DDASD+DT  YNGG  +F + + I VPLT  G+NYFFSD
Sbjct: 70  TNTNQTVIQTYNETTFSSCTTDDASDDDTFHYNGGGNEFGQNVTIAVPLTTTGTNYFFSD 129

Query: 131 ANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSAQMPPLMI----PQTKD 190
           A DG+QCQ G+AFEI VN GLGLPPSLNQPPPPPY  PP   ++QM P+ I    P+  D
Sbjct: 130 AEDGLQCQRGVAFEISVNRGLGLPPSLNQPPPPPYIEPPGPETSQMTPVNINGGSPEI-D 189

Query: 191 NGSSKTIANSRRELFFIAVMVLLLL 212
           N + +++AN R  L  + + V  LL
Sbjct: 190 NSALRSVANMRFLLSPLLIGVTSLL 213

The following BLAST results are available for this feature:
BLAST of CmoCh17G000260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh17G000260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8Z1_CUCSA8.6e-9181.60Uncharacterized protein OS=Cucumis sativus GN=Csa_6G076780 PE=4 SV=1[more]
U5GPR1_POPTR6.2e-6570.88Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15180g PE=4 SV=1[more]
A0A067H215_CITSI6.9e-6463.90Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027953mg PE=4 SV=1[more]
V4TDP0_9ROSI6.9e-6463.90Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022194mg PE=4 SV=1[more]
A0A067K8Z9_JATCU6.4e-6263.13Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14496 PE=4 SV=1[more]
BLAST of CmoCh17G000260 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G08500.12.1e-2739.01 early nodulin-like protein 18[more]
AT3G20570.14.0e-0727.07 early nodulin-like protein 9[more]
AT2G44790.17.6e-0627.48 uclacyanin 2[more]
BLAST of CmoCh17G000260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659120325|ref|XP_008460134.1|6.5e-9282.16PREDICTED: blue copper protein-like [Cucumis melo][more]
gi|449454510|ref|XP_004144997.1|1.2e-9081.60PREDICTED: blue copper protein-like [Cucumis sativus][more]
gi|566158148|ref|XP_006386579.1|8.9e-6570.88hypothetical protein POPTR_0002s15180g [Populus trichocarpa][more]
gi|743916242|ref|XP_011002095.1|3.4e-6469.78PREDICTED: cucumber peeling cupredoxin-like [Populus euphratica][more]
gi|567905450|ref|XP_006445213.1|9.8e-6463.90hypothetical protein CICLE_v10022194mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003245Phytocyanin_dom
IPR008972Cupredoxin
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0022900 electron transport chain
cellular_component GO:0005575 cellular_component
molecular_function GO:0009055 electron carrier activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G000260.1CmoCh17G000260.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003245Phytocyanin domainPFAMPF02298Cu_bind_likecoord: 46..141
score: 5.7
IPR003245Phytocyanin domainPROFILEPS51485PHYTOCYANINcoord: 29..149
score: 27
IPR008972CupredoxinGENE3DG3DSA:2.60.40.420coord: 28..148
score: 2.3
IPR008972CupredoxinunknownSSF49503Cupredoxinscoord: 30..147
score: 5.63
NoneNo IPR availablePANTHERPTHR33021FAMILY NOT NAMEDcoord: 1..184
score: 4.7
NoneNo IPR availablePANTHERPTHR33021:SF6SUBFAMILY NOT NAMEDcoord: 1..184
score: 4.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh17G000260Cucsa.362890Cucumber (Gy14) v1cgycmoB0999
CmoCh17G000260CmaCh17G000250Cucurbita maxima (Rimu)cmacmoB353
CmoCh17G000260CmaCh08G009480Cucurbita maxima (Rimu)cmacmoB887
CmoCh17G000260Cla006950Watermelon (97103) v1cmowmB348
CmoCh17G000260Csa6G076780Cucumber (Chinese Long) v2cmocuB359
CmoCh17G000260MELO3C022509Melon (DHL92) v3.5.1cmomeB309
CmoCh17G000260ClCG06G000290Watermelon (Charleston Gray)cmowcgB319
CmoCh17G000260CSPI06G05770Wild cucumber (PI 183967)cmocpiB362
CmoCh17G000260Lsi09G019060Bottle gourd (USVL1VR-Ls)cmolsiB323
CmoCh17G000260Cp4.1LG12g00230Cucurbita pepo (Zucchini)cmocpeB335
CmoCh17G000260Cp4.1LG17g02540Cucurbita pepo (Zucchini)cmocpeB357
CmoCh17G000260MELO3C022509.2Melon (DHL92) v3.6.1cmomedB354
CmoCh17G000260CsaV3_6G006080Cucumber (Chinese Long) v3cmocucB0434
CmoCh17G000260Bhi12G002295Wax gourdcmowgoB0459
CmoCh17G000260CsGy6G005740Cucumber (Gy14) v2cgybcmoB735
CmoCh17G000260Carg11093Silver-seed gourdcarcmoB1448
CmoCh17G000260Carg10208Silver-seed gourdcarcmoB0320
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh17G000260CmoCh08G009160Cucurbita moschata (Rifu)cmocmoB314
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh17G000260Cucurbita moschata (Rifu)cmocmoB198
CmoCh17G000260Cucurbita moschata (Rifu)cmocmoB308
CmoCh17G000260Cucurbita maxima (Rimu)cmacmoB251
CmoCh17G000260Cucurbita maxima (Rimu)cmacmoB811
CmoCh17G000260Cucurbita pepo (Zucchini)cmocpeB364
CmoCh17G000260Silver-seed gourdcarcmoB0851
CmoCh17G000260Watermelon (97103) v2cmowmbB355