CmaCh17G000250 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G000250
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Early nodulin-55-2
Location	Cma_Chr17 : 107592 .. 108720 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAGTCGAATATAAAAAAGCACTAATACTCCCAAATTTCTCACCACAGCTGTCTCATTTCTCACATTCGGACACTCCAACATCGATGGCGGTGGAGACGGCAGCGTTCACGGCGCTCGGCGCTCTCTTGATCACGGCGGCGGCATCTCAAACCCCTCCGACGGCTTATTCTAATCACACAGTCGGTGGCCCTGCAGGTTGGTTCTTCAACGCCACCAAGAACATTTCCGCCGCCAATTACTCCTCCTGGGTAAGCTCAATCTCTCTTCTCCTCCTTTAGATTATATGTTCGTAATCGTCTTCTTGCTTCACTAATTTCTCTTCAACTATACATTACTGCCTTCATGGTTCAGGAATAAATGTGTTTCGGTTGCTTAGATCAACTAAACCAATGGATTTCTGCTATTTTCTCTTCATTAGTTCAGATTTGTGCTCAAAATCTAGATTTCTATTTCGCAATCTGAATTCGATAATCCGACTACGGGTATTGCTCTCTCTTATCAATCAATTAACTAACAGAACTTCATGGTCATTGTTTCGCTTGTCTTATTAATTGCAGTCTTCAGAACGAATTCGAATCACACCGTGATCCAGTCCTACAACTTGACGGCATTCCAGAGCTGCTCCTTCGACGACGCCTCCGATAACGACACGCTTCAGTACAATGGCGGAGATACCGACTTCAACAAGCCATTGATCATTCAAGTGCCACTGACCATCAAAGGTTCGAACTACTTCTTCTCCGACGCCAATGACGGAGTTCAATGTCAAGAAGGTATGGCCTTCGAGATCCAGGTCAATACCGGGCTCGGTTTGCCGCCAAGCCTGAATCAGCCGCCTCCACCTCCTTATGCGACGCCGCCGGATTCCAATTCGGTTCAGATGCCTCCATTGATGATTCCTCAAACAAAGAACAACGGCAGCCACAAAACCATCGCTAACTCACGCCGAGATTTCTTCTTCATCGCGGTGATGGTGTTGCTGCTACTCTGCTAGACGGCCGAGGTCAGATTCGAGATCACAGGCTTCCCTCCCTGTCCTCTGTGTGGCAGTTTTGTAATATATAGATATATATACTTCCAGTTCATTGATATCAATAGAGACGAGATTATAATATTAAAGAGTCTGAG

mRNA sequence

CCAGTCGAATATAAAAAAGCACTAATACTCCCAAATTTCTCACCACAGCTGTCTCATTTCTCACATTCGGACACTCCAACATCGATGGCGGTGGAGACGGCAGCGTTCACGGCGCTCGGCGCTCTCTTGATCACGGCGGCGGCATCTCAAACCCCTCCGACGGCTTATTCTAATCACACAGTCGGTGGCCCTGCAGGTTGGTTCTTCAACGCCACCAAGAACATTTCCGCCGCCAATTACTCCTCCTGGATTTCTATTTCGCAATCTGAATTCGATAATCCGACTACGGTCTTCAGAACGAATTCGAATCACACCGTGATCCAGTCCTACAACTTGACGGCATTCCAGAGCTGCTCCTTCGACGACGCCTCCGATAACGACACGCTTCAGTACAATGGCGGAGATACCGACTTCAACAAGCCATTGATCATTCAAGTGCCACTGACCATCAAAGGTTCGAACTACTTCTTCTCCGACGCCAATGACGGAGTTCAATGTCAAGAAGGTATGGCCTTCGAGATCCAGGTCAATACCGGGCTCGGTTTGCCGCCAAGCCTGAATCAGCCGCCTCCACCTCCTTATGCGACGCCGCCGGATTCCAATTCGGTTCAGATGCCTCCATTGATGATTCCTCAAACAAAGAACAACGGCAGCCACAAAACCATCGCTAACTCACGCCGAGATTTCTTCTTCATCGCGGTGATGGTGTTGCTGCTACTCTGCTAGACGGCCGAGGTCAGATTCGAGATCACAGGCTTCCCTCCCTGTCCTCTGTGTGGCAGTTTTGTAATATATAGATATATATACTTCCAGTTCATTGATATCAATAGAGACGAGATTATAATATTAAAGAGTCTGAG

Coding sequence (CDS)

ATGGCGGTGGAGACGGCAGCGTTCACGGCGCTCGGCGCTCTCTTGATCACGGCGGCGGCATCTCAAACCCCTCCGACGGCTTATTCTAATCACACAGTCGGTGGCCCTGCAGGTTGGTTCTTCAACGCCACCAAGAACATTTCCGCCGCCAATTACTCCTCCTGGATTTCTATTTCGCAATCTGAATTCGATAATCCGACTACGGTCTTCAGAACGAATTCGAATCACACCGTGATCCAGTCCTACAACTTGACGGCATTCCAGAGCTGCTCCTTCGACGACGCCTCCGATAACGACACGCTTCAGTACAATGGCGGAGATACCGACTTCAACAAGCCATTGATCATTCAAGTGCCACTGACCATCAAAGGTTCGAACTACTTCTTCTCCGACGCCAATGACGGAGTTCAATGTCAAGAAGGTATGGCCTTCGAGATCCAGGTCAATACCGGGCTCGGTTTGCCGCCAAGCCTGAATCAGCCGCCTCCACCTCCTTATGCGACGCCGCCGGATTCCAATTCGGTTCAGATGCCTCCATTGATGATTCCTCAAACAAAGAACAACGGCAGCCACAAAACCATCGCTAACTCACGCCGAGATTTCTTCTTCATCGCGGTGATGGTGTTGCTGCTACTCTGCTAG

Protein sequence

MAVETAAFTALGALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISAANYSSWISISQSEFDNPTTVFRTNSNHTVIQSYNLTAFQSCSFDDASDNDTLQYNGGDTDFNKPLIIQVPLTIKGSNYFFSDANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSVQMPPLMIPQTKNNGSHKTIANSRRDFFFIAVMVLLLLC

Homology

[Close]

BLAST of CmaCh17G000250 vs. TrEMBL
Match: A0A0A0K8Z1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G076780 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.4e-80
Identity = 160/214 (74.77%), Postives = 180/214 (84.11%), Query Frame = 1


Query: 1   MAVETAAFTALGALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISAANYSSWISISQ 60
           MA ETAAFTAL ALLITA ASQTPPTAY+N+TVGGPAGWFFNAT NIS  NYSSW + SQ
Sbjct: 1   MAPETAAFTALFALLITAVASQTPPTAYTNYTVGGPAGWFFNATNNISTTNYSSWAA-SQ 60

Query: 61  SEFDNPTTVFRTNSNHTVIQSYNLTAFQSCSFDDASDNDTLQYNGGDTDFNKPLIIQVPL 120
           +       +FRTNSN TVIQ+YNLT F SCSFDDASDNDT+QY GGD++FNKPL+I VPL
Sbjct: 61  TFNLGDFLIFRTNSNQTVIQTYNLTTFNSCSFDDASDNDTVQYYGGDSNFNKPLVIPVPL 120

Query: 121 TIKGSNYFFSDANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSVQMPPL 180
           TIKG NYFFSDA+DGVQCQ GMAFEI+VNTGLGLPPSLNQPPPPPYATPPDS+S Q PP 
Sbjct: 121 TIKGPNYFFSDADDGVQCQRGMAFEIEVNTGLGLPPSLNQPPPPPYATPPDSDSSQTPPF 180

Query: 181 MIP-QTKNNGSHKTIANSRRD--FFFIAVMVLLL 212
            IP +TK NG  K++AN R+D  FFF+AV+ LL+
Sbjct: 181 TIPDETKKNGGFKSVANLRQDLFFFFMAVIPLLM 213

[Close]

BLAST of CmaCh17G000250 vs. TrEMBL
Match: U5GPR1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15180g PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 5.0e-54
Identity = 115/183 (62.84%), Postives = 136/183 (74.32%), Query Frame = 1


Query: 1   MAVETAAFTALGALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISAANYSSWISISQ 60
           M + T    A+ A+LITAA SQ PP  Y NHTVG  AGWFFN+T N +AANYSSW + SQ
Sbjct: 1   MRLATILHLAIIAVLITAATSQAPPIRYINHTVGDNAGWFFNSTTNTTAANYSSWAA-SQ 60

Query: 61  SEFDNPTTVFRTNSNHTVIQSYNLTAFQSCSFDDASDNDTLQYNGGDTDFNKPLIIQVPL 120
           +       +FRT+SN TVIQ+YNLT F+ CS D +SDNDT+ YNGG+T F++ L I VPL
Sbjct: 61  TFNLGDYLIFRTSSNQTVIQTYNLTTFKDCSIDHSSDNDTVVYNGGNTVFDQALTIPVPL 120

Query: 121 TIKGSNYFFSDANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSVQMPPL 180
           TI+G NYFFSDANDG+QCQ G+AFEI VN GLGLPPSLNQPPPPPY  PP  +S   PP+
Sbjct: 121 TIQGPNYFFSDANDGIQCQYGLAFEINVNRGLGLPPSLNQPPPPPYREPPGPDSAS-PPI 180

Query: 181 MIP 184
            IP
Sbjct: 181 TIP 181

[Close]

BLAST of CmaCh17G000250 vs. TrEMBL
Match: A0A067H215_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027953mg PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.1e-53
Identity = 112/190 (58.95%), Postives = 136/190 (71.58%), Query Frame = 1


Query: 13  ALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISAANYSSWISISQSEFDNPTTVFRT 72
           ALLIT  AS TP TAY+NHTVGGPAGW F+A  NISA NYSSW + +Q+       +F T
Sbjct: 12  ALLITVVASDTPATAYTNHTVGGPAGWSFDAINNISATNYSSWAA-NQTYNLGDYLIFNT 71

Query: 73  NSNHTVIQSYNLTAFQSCSFDDASDNDTLQYNGGDTDFNKPLIIQVPLTIKGSNYFFSDA 132
           N+N TVIQ+YN T F SC+ DDASD+DT  YNGG  +F + + I VPLT  G+NYFFSDA
Sbjct: 72  NTNQTVIQTYNETTFSSCTTDDASDDDTFHYNGGGNEFGQNVTIAVPLTTTGTNYFFSDA 131

Query: 133 NDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSVQMPPLMI----PQTKNN 192
            DG+QCQ G+AFEI VN GLGLPPSLNQPPPPPY  PP   + QM P+ I    P+  +N
Sbjct: 132 EDGLQCQRGVAFEISVNRGLGLPPSLNQPPPPPYIEPPGPETSQMTPVNINGGSPEI-DN 191

Query: 193 GSHKTIANSR 199
            + +++AN R
Sbjct: 192 SALRSVANMR 199

[Close]

BLAST of CmaCh17G000250 vs. TrEMBL
Match: V4TDP0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022194mg PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.1e-53
Identity = 112/190 (58.95%), Postives = 136/190 (71.58%), Query Frame = 1


Query: 13  ALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISAANYSSWISISQSEFDNPTTVFRT 72
           ALLIT  AS TP TAY+NHTVGGPAGW F+A  NISA NYSSW + +Q+       +F T
Sbjct: 12  ALLITVVASDTPATAYTNHTVGGPAGWSFDAINNISATNYSSWAA-NQTYNLGDYLIFNT 71

Query: 73  NSNHTVIQSYNLTAFQSCSFDDASDNDTLQYNGGDTDFNKPLIIQVPLTIKGSNYFFSDA 132
           N+N TVIQ+YN T F SC+ DDASD+DT  YNGG  +F + + I VPLT  G+NYFFSDA
Sbjct: 72  NTNQTVIQTYNETTFSSCTTDDASDDDTFHYNGGGNEFGQNVTIAVPLTTTGTNYFFSDA 131

Query: 133 NDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSVQMPPLMI----PQTKNN 192
            DG+QCQ G+AFEI VN GLGLPPSLNQPPPPPY  PP   + QM P+ I    P+  +N
Sbjct: 132 EDGLQCQRGVAFEISVNRGLGLPPSLNQPPPPPYIEPPGPETSQMTPVNINGGSPEI-DN 191

Query: 193 GSHKTIANSR 199
            + +++AN R
Sbjct: 192 SALRSVANMR 199

[Close]

BLAST of CmaCh17G000250 vs. TrEMBL
Match: A0A067K8Z9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14496 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 7.9e-52
Identity = 118/203 (58.13%), Postives = 141/203 (69.46%), Query Frame = 1


Query: 1   MAVETAAFTALGALLITAAASQTPPTAYSNHTVGGPAGWFFNATKN-ISAANYSSWISIS 60
           M   T     + AL+I AAASQT PTAY+NHTVGG AGWFFN+T N  +AANYSSW + +
Sbjct: 1   MTAATFMRVTITALMIAAAASQTRPTAYTNHTVGGNAGWFFNSTTNTAAAANYSSW-AAA 60

Query: 61  QSEFDNPTTVFRTNSNHTVIQSYNLTAFQSCSFDDASDNDTLQYNGGDTDFNKPLIIQVP 120
           Q+       +F TNSN TVIQ+YN + F+SC+ DDA D+DT Q+ GG T F + L I V 
Sbjct: 61  QTFNLGDFLIFNTNSNQTVIQTYNESTFRSCTTDDALDSDTFQFGGGSTAFGEALTIPVA 120

Query: 121 LTIKGSNYFFSDANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSVQMPP 180
           LTI+G NYFFSDA+DG QCQ G+AFEIQVN GLGLPPSLNQPPPPPY  PP  +S Q PP
Sbjct: 121 LTIEGPNYFFSDADDGSQCQHGLAFEIQVNHGLGLPPSLNQPPPPPYIEPPGPDSAQPPP 180

Query: 181 LMI---PQTKNNGSHKTIANSRR 200
           + I    +T  N   K  A+ RR
Sbjct: 181 ITIAGGSETPLNYGVKDGADMRR 202

[Close]

BLAST of CmaCh17G000250 vs. TAIR10
Match: AT1G08500.1 (AT1G08500.1 early nodulin-like protein 18)

HSP 1 Score: 96.3 bits (238), Expect = 2.4e-20
Identity = 59/152 (38.82%), Postives = 82/152 (53.95%), Query Frame = 1


Query: 27  AYSNHTVGGPAGWFFNATKNISAANYSSWISISQSEFDNPTTVFRTNSNHTVIQSYNLTA 86
           AY N+TVG   GWF    +   +ANY  W   S+S       +F T+SNH+V+Q+Y+   
Sbjct: 26  AYKNYTVGESTGWF--DIQERPSANYQKWAD-SKSFSLGDFLIFNTDSNHSVVQTYDFKT 85

Query: 87  FQSCSFDDASDNDTLQYNGGDTDFNKPL--IIQVPLTIKGSNYFFSDANDGVQCQEGMAF 146
           ++ C +D+  +NDT +++  +     P+   I VPL  +GSNYFFS   DG QC+ G  F
Sbjct: 86  YKDCDYDNNENNDTTEWSAANPSATSPVPVSISVPLVKEGSNYFFSGNYDGEQCKFGQHF 145

Query: 147 EIQVNTGLGLPPSLNQPPPPPYATPPDSNSVQ 177
            I V  G GLP S +   P   A P  S S Q
Sbjct: 146 MINVTHGQGLPDSSS---PDDAAAPGPSESSQ 171

[Close]

BLAST of CmaCh17G000250 vs. NCBI nr
Match: gi|659120325|ref|XP_008460134.1| (PREDICTED: blue copper protein-like [Cucumis melo])

HSP 1 Score: 311.6 bits (797), Expect = 1.1e-81
Identity = 160/214 (74.77%), Postives = 176/214 (82.24%), Query Frame = 1


Query: 1   MAVETAAFTALGALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISAANYSSWISISQ 60
           MA ETAAF+A  ALLIT  ASQTPPTAY+NHTVGGPAGWFFNAT NIS  NYSSW + SQ
Sbjct: 1   MAAETAAFSAFFALLITMVASQTPPTAYTNHTVGGPAGWFFNATNNISTTNYSSWAA-SQ 60

Query: 61  SEFDNPTTVFRTNSNHTVIQSYNLTAFQSCSFDDASDNDTLQYNGGDTDFNKPLIIQVPL 120
           +       +FRTNSN TVIQ+YNLT F SCSFDDASDNDT+QY GGD++FNKPL+I VPL
Sbjct: 61  TFNLGDFLIFRTNSNQTVIQTYNLTTFNSCSFDDASDNDTVQYYGGDSNFNKPLVIPVPL 120

Query: 121 TIKGSNYFFSDANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSVQMPPL 180
           TIKG NYFFSDA+DGVQCQ GMAFEIQVNTGLGLPPSLNQPPPPPYATPPDS S Q PP 
Sbjct: 121 TIKGPNYFFSDADDGVQCQRGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSESSQTPPF 180

Query: 181 MIPQTKNNGSHKTIANSRRD----FFFIAVMVLL 211
            IP+TK NG  K++AN RRD    FFF+A+M LL
Sbjct: 181 TIPETKKNGGFKSVANLRRDLFFFFFFMAMMPLL 213

[Close]

BLAST of CmaCh17G000250 vs. NCBI nr
Match: gi|449454510|ref|XP_004144997.1| (PREDICTED: blue copper protein-like [Cucumis sativus])

HSP 1 Score: 307.4 bits (786), Expect = 2.0e-80
Identity = 160/214 (74.77%), Postives = 180/214 (84.11%), Query Frame = 1


Query: 1   MAVETAAFTALGALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISAANYSSWISISQ 60
           MA ETAAFTAL ALLITA ASQTPPTAY+N+TVGGPAGWFFNAT NIS  NYSSW + SQ
Sbjct: 1   MAPETAAFTALFALLITAVASQTPPTAYTNYTVGGPAGWFFNATNNISTTNYSSWAA-SQ 60

Query: 61  SEFDNPTTVFRTNSNHTVIQSYNLTAFQSCSFDDASDNDTLQYNGGDTDFNKPLIIQVPL 120
           +       +FRTNSN TVIQ+YNLT F SCSFDDASDNDT+QY GGD++FNKPL+I VPL
Sbjct: 61  TFNLGDFLIFRTNSNQTVIQTYNLTTFNSCSFDDASDNDTVQYYGGDSNFNKPLVIPVPL 120

Query: 121 TIKGSNYFFSDANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSVQMPPL 180
           TIKG NYFFSDA+DGVQCQ GMAFEI+VNTGLGLPPSLNQPPPPPYATPPDS+S Q PP 
Sbjct: 121 TIKGPNYFFSDADDGVQCQRGMAFEIEVNTGLGLPPSLNQPPPPPYATPPDSDSSQTPPF 180

Query: 181 MIP-QTKNNGSHKTIANSRRD--FFFIAVMVLLL 212
            IP +TK NG  K++AN R+D  FFF+AV+ LL+
Sbjct: 181 TIPDETKKNGGFKSVANLRQDLFFFFMAVIPLLM 213

[Close]

BLAST of CmaCh17G000250 vs. NCBI nr
Match: gi|566158148|ref|XP_006386579.1| (hypothetical protein POPTR_0002s15180g [Populus trichocarpa])

HSP 1 Score: 219.2 bits (557), Expect = 7.1e-54
Identity = 115/183 (62.84%), Postives = 136/183 (74.32%), Query Frame = 1


Query: 1   MAVETAAFTALGALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISAANYSSWISISQ 60
           M + T    A+ A+LITAA SQ PP  Y NHTVG  AGWFFN+T N +AANYSSW + SQ
Sbjct: 1   MRLATILHLAIIAVLITAATSQAPPIRYINHTVGDNAGWFFNSTTNTTAANYSSWAA-SQ 60

Query: 61  SEFDNPTTVFRTNSNHTVIQSYNLTAFQSCSFDDASDNDTLQYNGGDTDFNKPLIIQVPL 120
           +       +FRT+SN TVIQ+YNLT F+ CS D +SDNDT+ YNGG+T F++ L I VPL
Sbjct: 61  TFNLGDYLIFRTSSNQTVIQTYNLTTFKDCSIDHSSDNDTVVYNGGNTVFDQALTIPVPL 120

Query: 121 TIKGSNYFFSDANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSVQMPPL 180
           TI+G NYFFSDANDG+QCQ G+AFEI VN GLGLPPSLNQPPPPPY  PP  +S   PP+
Sbjct: 121 TIQGPNYFFSDANDGIQCQYGLAFEINVNRGLGLPPSLNQPPPPPYREPPGPDSAS-PPI 180

Query: 181 MIP 184
            IP
Sbjct: 181 TIP 181

[Close]

BLAST of CmaCh17G000250 vs. NCBI nr
Match: gi|743916242|ref|XP_011002095.1| (PREDICTED: cucumber peeling cupredoxin-like [Populus euphratica])

HSP 1 Score: 215.3 bits (547), Expect = 1.0e-52
Identity = 112/183 (61.20%), Postives = 134/183 (73.22%), Query Frame = 1


Query: 1   MAVETAAFTALGALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISAANYSSWISISQ 60
           M + T    A+ A+LITAA SQ PP  Y NHTVG  AGWFFN+T N +  NYSSW + SQ
Sbjct: 1   MRLATILHLAIIAVLITAATSQAPPIRYINHTVGDNAGWFFNSTTNTTVTNYSSWAA-SQ 60

Query: 61  SEFDNPTTVFRTNSNHTVIQSYNLTAFQSCSFDDASDNDTLQYNGGDTDFNKPLIIQVPL 120
           +       +FRT+SN TVIQ+YNLT F++CS D +SDNDT  YNGG+T F++ L I VPL
Sbjct: 61  TFNLGDYLIFRTSSNQTVIQTYNLTTFKNCSIDHSSDNDTFVYNGGNTVFDQALTIPVPL 120

Query: 121 TIKGSNYFFSDANDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSVQMPPL 180
           TI+G NYFFSDANDG+QCQ G+AFEI +N GLGLPPSLNQPPPPPY  PP  +S   PP+
Sbjct: 121 TIQGPNYFFSDANDGIQCQFGLAFEININRGLGLPPSLNQPPPPPYREPPGPDSAS-PPI 180

Query: 181 MIP 184
            IP
Sbjct: 181 TIP 181

[Close]

BLAST of CmaCh17G000250 vs. NCBI nr
Match: gi|567905450|ref|XP_006445213.1| (hypothetical protein CICLE_v10022194mg [Citrus clementina])

HSP 1 Score: 215.3 bits (547), Expect = 1.0e-52
Identity = 112/190 (58.95%), Postives = 136/190 (71.58%), Query Frame = 1


Query: 13  ALLITAAASQTPPTAYSNHTVGGPAGWFFNATKNISAANYSSWISISQSEFDNPTTVFRT 72
           ALLIT  AS TP TAY+NHTVGGPAGW F+A  NISA NYSSW + +Q+       +F T
Sbjct: 12  ALLITVVASDTPATAYTNHTVGGPAGWSFDAINNISATNYSSWAA-NQTYNLGDYLIFNT 71

Query: 73  NSNHTVIQSYNLTAFQSCSFDDASDNDTLQYNGGDTDFNKPLIIQVPLTIKGSNYFFSDA 132
           N+N TVIQ+YN T F SC+ DDASD+DT  YNGG  +F + + I VPLT  G+NYFFSDA
Sbjct: 72  NTNQTVIQTYNETTFSSCTTDDASDDDTFHYNGGGNEFGQNVTIAVPLTTTGTNYFFSDA 131

Query: 133 NDGVQCQEGMAFEIQVNTGLGLPPSLNQPPPPPYATPPDSNSVQMPPLMI----PQTKNN 192
            DG+QCQ G+AFEI VN GLGLPPSLNQPPPPPY  PP   + QM P+ I    P+  +N
Sbjct: 132 EDGLQCQRGVAFEISVNRGLGLPPSLNQPPPPPYIEPPGPETSQMTPVNINGGSPEI-DN 191

Query: 193 GSHKTIANSR 199
            + +++AN R
Sbjct: 192 SALRSVANMR 199

The following BLAST results are available for this feature:

BLAST of CmaCh17G000250 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh17G000250 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8Z1_CUCSA	1.4e-80	74.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G076780 PE=4 SV=1	[more]
U5GPR1_POPTR	5.0e-54	62.84	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15180g PE=4 SV=1	[more]
A0A067H215_CITSI	7.1e-53	58.95	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027953mg PE=4 SV=1	[more]
V4TDP0_9ROSI	7.1e-53	58.95	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022194mg PE=4 SV=1	[more]
A0A067K8Z9_JATCU	7.9e-52	58.13	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14496 PE=4 SV=1	[more]

BLAST of CmaCh17G000250 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08500.1	2.4e-20	38.82	early nodulin-like protein 18	[more]

BLAST of CmaCh17G000250 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120325\|ref\|XP_008460134.1\|	1.1e-81	74.77	PREDICTED: blue copper protein-like [Cucumis melo]	[more]
gi\|449454510\|ref\|XP_004144997.1\|	2.0e-80	74.77	PREDICTED: blue copper protein-like [Cucumis sativus]	[more]
gi\|566158148\|ref\|XP_006386579.1\|	7.1e-54	62.84	hypothetical protein POPTR_0002s15180g [Populus trichocarpa]	[more]
gi\|743916242\|ref\|XP_011002095.1\|	1.0e-52	61.20	PREDICTED: cucumber peeling cupredoxin-like [Populus euphratica]	[more]
gi\|567905450\|ref\|XP_006445213.1\|	1.0e-52	58.95	hypothetical protein CICLE_v10022194mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003245	Phytocyanin_dom
IPR008972	Cupredoxin

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G000250.1	CmaCh17G000250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 48..142 score: 1.
IPR003245	Phytocyanin domain	PROFILE	PS51485	PHYTOCYANIN	coord: 29..150 score: 16
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 28..149 score: 4.7
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 30..148 score: 1.1
None	No IPR available	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 1..185 score: 4.7
None	No IPR available	PANTHER	PTHR33021:SF6	SUBFAMILY NOT NAMED	coord: 1..185 score: 4.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G000250	Cucsa.362890	Cucumber (Gy14) v1	cgycmaB0998
CmaCh17G000250	Cla006950	Watermelon (97103) v1	cmawmB353
CmaCh17G000250	Csa6G076780	Cucumber (Chinese Long) v2	cmacuB369
CmaCh17G000250	MELO3C022509	Melon (DHL92) v3.5.1	cmameB316
CmaCh17G000250	ClCG06G000290	Watermelon (Charleston Gray)	cmawcgB323
CmaCh17G000250	CSPI06G05770	Wild cucumber (PI 183967)	cmacpiB373
CmaCh17G000250	CmoCh08G009160	Cucurbita moschata (Rifu)	cmacmoB365
CmaCh17G000250	CmoCh17G000260	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G000250	Lsi09G019060	Bottle gourd (USVL1VR-Ls)	cmalsiB334
CmaCh17G000250	Cp4.1LG12g00230	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G000250	Cp4.1LG17g02540	Cucurbita pepo (Zucchini)	cmacpeB393
CmaCh17G000250	MELO3C022509.2	Melon (DHL92) v3.6.1	cmamedB368
CmaCh17G000250	CsaV3_6G006080	Cucumber (Chinese Long) v3	cmacucB0441
CmaCh17G000250	Bhi12G002295	Wax gourd	cmawgoB0465
CmaCh17G000250	CsGy6G005740	Cucumber (Gy14) v2	cgybcmaB753
CmaCh17G000250	Carg11093	Silver-seed gourd	carcmaB1490
CmaCh17G000250	Carg10208	Silver-seed gourd	carcmaB0314

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh17G000250	CmaCh08G009480	Cucurbita maxima (Rimu)	cmacmaB373

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G000250	Wax gourd	cmawgoB0461
CmaCh17G000250	Cucurbita maxima (Rimu)	cmacmaB249
CmaCh17G000250	Cucurbita maxima (Rimu)	cmacmaB370
CmaCh17G000250	Cucurbita moschata (Rifu)	cmacmoB350
CmaCh17G000250	Cucurbita moschata (Rifu)	cmacmoB362
CmaCh17G000250	Wild cucumber (PI 183967)	cmacpiB361
CmaCh17G000250	Cucumber (Chinese Long) v2	cmacuB357
CmaCh17G000250	Watermelon (97103) v1	cmawmB344
CmaCh17G000250	Cucurbita pepo (Zucchini)	cmacpeB402
CmaCh17G000250	Bottle gourd (USVL1VR-Ls)	cmalsiB356
CmaCh17G000250	Cucumber (Gy14) v2	cgybcmaB345
CmaCh17G000250	Silver-seed gourd	carcmaB0876
CmaCh17G000250	Cucumber (Chinese Long) v3	cmacucB0425
CmaCh17G000250	Watermelon (97103) v2	cmawmbB370
CmaCh17G000250	Watermelon (97103) v2	cmawmbB366