CmoCh16G010920 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh16G010920
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Calcium-binding EF-hand family protein
Location	Cmo_Chr16 : 7720603 .. 7721046 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAAAGATCTGAGCGATGAACAGAAATCCTCCATGAAGGAGGCCTTTACCCTCTTCGATTCCGACGGCGATGGCCGGATCGCCCCATCGGAGCTCGGGATTCTAATGCGTTCCCTCGGCGGCAACCCCACTCAAGCCCAACTCAAAGCCATTATCGCTGAGGAGAATCTCACTGCTCCTTTTGATTTCAATCGCTTTCTTGAGATCATGTCCAAGCACATGAAGCATGAGCCCTTCGATCGCCAGCTTCGAGACGCCTTTAAGGTTCTCGATAAAGAGAACACCGGTTACGTCCTCGTCTCGGAGCTCCGACACATTTTGACGAGTATTGGTGAGAAGCTTGAGCCGTCGGAGTTTGATGAGTGGATTCGAGAAGTTGAGGTCGGACCGGATGGTAAAATTCGGTATGAGGATTTCATTGCTCGAATGGTGGCCAAATGA

mRNA sequence

ATGGGCAAAGATCTGAGCGATGAACAGAAATCCTCCATGAAGGAGGCCTTTACCCTCTTCGATTCCGACGGCGATGGCCGGATCGCCCCATCGGAGCTCGGGATTCTAATGCGTTCCCTCGGCGGCAACCCCACTCAAGCCCAACTCAAAGCCATTATCGCTGAGGAGAATCTCACTGCTCCTTTTGATTTCAATCGCTTTCTTGAGATCATGTCCAAGCACATGAAGCATGAGCCCTTCGATCGCCAGCTTCGAGACGCCTTTAAGGTTCTCGATAAAGAGAACACCGGTTACGTCCTCGTCTCGGAGCTCCGACACATTTTGACGAGTATTGGTGAGAAGCTTGAGCCGTCGGAGTTTGATGAGTGGATTCGAGAAGTTGAGGTCGGACCGGATGGTAAAATTCGGTATGAGGATTTCATTGCTCGAATGGTGGCCAAATGA

Coding sequence (CDS)

ATGGGCAAAGATCTGAGCGATGAACAGAAATCCTCCATGAAGGAGGCCTTTACCCTCTTCGATTCCGACGGCGATGGCCGGATCGCCCCATCGGAGCTCGGGATTCTAATGCGTTCCCTCGGCGGCAACCCCACTCAAGCCCAACTCAAAGCCATTATCGCTGAGGAGAATCTCACTGCTCCTTTTGATTTCAATCGCTTTCTTGAGATCATGTCCAAGCACATGAAGCATGAGCCCTTCGATCGCCAGCTTCGAGACGCCTTTAAGGTTCTCGATAAAGAGAACACCGGTTACGTCCTCGTCTCGGAGCTCCGACACATTTTGACGAGTATTGGTGAGAAGCTTGAGCCGTCGGAGTTTGATGAGTGGATTCGAGAAGTTGAGGTCGGACCGGATGGTAAAATTCGGTATGAGGATTTCATTGCTCGAATGGTGGCCAAATGA

Homology

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BLAST of CmoCh16G010920 vs. Swiss-Prot
Match: CML13_ARATH (Probable calcium-binding protein CML13 OS=Arabidopsis thaliana GN=CML13 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 2.5e-66
Identity = 124/148 (83.78%), Postives = 140/148 (94.59%), Query Frame = 1


Query: 1   MGKD-LSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLT 60
           MGKD LSD+Q SSMKEAF LFD+DGDG+IAPSELGILMRSLGGNPTQAQLK+IIA ENL+
Sbjct: 1   MGKDGLSDDQVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIASENLS 60

Query: 61  APFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSE 120
           +PFDFNRFL++M+KH+K EPFDRQLRDAFKVLDKE TG+V V++LRHILTSIGEKLEP+E
Sbjct: 61  SPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLEPNE 120

Query: 121 FDEWIREVEVGPDGKIRYEDFIARMVAK 148
           FDEWI+EV+VG DGKIRYEDFIARMVAK
Sbjct: 121 FDEWIKEVDVGSDGKIRYEDFIARMVAK 148

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BLAST of CmoCh16G010920 vs. Swiss-Prot
Match: CML14_ARATH (Probable calcium-binding protein CML14 OS=Arabidopsis thaliana GN=CML14 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 8.9e-64
Identity = 119/148 (80.41%), Postives = 138/148 (93.24%), Query Frame = 1


Query: 1   MGKD-LSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLT 60
           M KD LS++Q SSMKEAF LFD+DGDG+IAPSELGILMRSLGGNPT++QLK+II  ENL+
Sbjct: 1   MSKDGLSNDQVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTESQLKSIITTENLS 60

Query: 61  APFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSE 120
           +PFDFNRFL++M+KH+K EPFDRQLRDAFKVLDKE TG+V V++LRHILTSIGEKL+PSE
Sbjct: 61  SPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLQPSE 120

Query: 121 FDEWIREVEVGPDGKIRYEDFIARMVAK 148
           FDEWI+EV+VG DGKIRYEDFIARMVAK
Sbjct: 121 FDEWIKEVDVGSDGKIRYEDFIARMVAK 148

[Close]

BLAST of CmoCh16G010920 vs. Swiss-Prot
Match: CML7_ORYSJ (Probable calcium-binding protein CML7 OS=Oryza sativa subsp. japonica GN=CML7 PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.5e-58
Identity = 108/146 (73.97%), Postives = 130/146 (89.04%), Query Frame = 1


Query: 2   GKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTAP 61
           GK+LS+EQ +SM+EAF+LFD+DGDGRIAPSELG+LMRSLGGNPTQAQL+ I A+E LTAP
Sbjct: 3   GKELSEEQVASMREAFSLFDTDGDGRIAPSELGVLMRSLGGNPTQAQLRDIAAQEKLTAP 62

Query: 62  FDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEFD 121
           FDF RFL++M  H++ EPFDR LRDAF+VLDK+ +G V V++LRH+LTSIGEKLEP EFD
Sbjct: 63  FDFPRFLDLMRAHLRPEPFDRPLRDAFRVLDKDASGTVSVADLRHVLTSIGEKLEPHEFD 122

Query: 122 EWIREVEVGPDGKIRYEDFIARMVAK 148
           EWIREV+V PDG IRY+DFI R+VAK
Sbjct: 123 EWIREVDVAPDGTIRYDDFIRRIVAK 148

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BLAST of CmoCh16G010920 vs. Swiss-Prot
Match: CALM_AGABI (Calmodulin OS=Agaricus bisporus PE=1 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 1.9e-34
Identity = 72/149 (48.32%), Postives = 102/149 (68.46%), Query Frame = 1


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENL-- 60
           M   LS+EQ S  KEAF+LFD DGDG I   ELG +MRSLG NP+QA+L+ +I E +   
Sbjct: 1   MADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPSQAELEDMINEVDADG 60

Query: 61  TAPFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPS 120
               DF  FL +M++ M+    + ++++AFKV DK+  GY+  +ELRH++T++GEKL  S
Sbjct: 61  NGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDS 120

Query: 121 EFDEWIREVEVGPDGKIRYEDFIARMVAK 148
           E DE IRE +V  DG+I YE+F+  M++K
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKMMLSK 149

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BLAST of CmoCh16G010920 vs. Swiss-Prot
Match: CALM_MYXGL (Calmodulin OS=Myxine glutinosa PE=2 SV=3)

HSP 1 Score: 146.4 bits (368), Expect = 2.5e-34
Identity = 70/149 (46.98%), Postives = 100/149 (67.11%), Query Frame = 1


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENL-- 60
           M   L++EQ +  KEAF+LFD DGDG I   ELG +MRSLG NPT+A+L+ +I E N   
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVNADG 60

Query: 61  TAPFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPS 120
               DF  FL +M++ MK    + ++R+AF+V DK+  GY+  +ELRH++T++GEKL   
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120

Query: 121 EFDEWIREVEVGPDGKIRYEDFIARMVAK 148
           E DE IRE ++  DG++ YE+F+  M AK
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTAK 149

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BLAST of CmoCh16G010920 vs. TrEMBL
Match: A0A0A0L2F2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G036390 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.4e-71
Identity = 137/147 (93.20%), Postives = 143/147 (97.28%), Query Frame = 1


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLSD+QKSSM+EAFTLFD+DGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLT+
Sbjct: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFL+IMSKHMK EPFDRQLRDAFKVLDK+NTGYV VSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLDIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVRVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 148
           DEWIREVEVG DG IRYEDFIARMVAK
Sbjct: 121 DEWIREVEVGSDGSIRYEDFIARMVAK 147

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BLAST of CmoCh16G010920 vs. TrEMBL
Match: A0A0D2Q0R6_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_008G239400 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 6.4e-69
Identity = 132/147 (89.80%), Postives = 142/147 (96.60%), Query Frame = 1


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLSDEQ SSMKEAFTLFD+DGDG+IAPSELGILMRSLGGNPTQAQLKAIIAEE LTA
Sbjct: 60  MGKDLSDEQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKAIIAEEKLTA 119

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDF RFL++MSKHMK EPFDRQLRDAFKVLDK+NTG+V V++LRHILTSIGEKLEPSEF
Sbjct: 120 PFDFPRFLDLMSKHMKPEPFDRQLRDAFKVLDKDNTGFVSVADLRHILTSIGEKLEPSEF 179

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 148
           DEWIREV+VGPDGKIRYE+FIARMVAK
Sbjct: 180 DEWIREVDVGPDGKIRYEEFIARMVAK 206

[Close]

BLAST of CmoCh16G010920 vs. TrEMBL
Match: I1LGL7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G030100 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 4.2e-68
Identity = 130/147 (88.44%), Postives = 142/147 (96.60%), Query Frame = 1


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLSDEQ SSMKEAF+LFD+DGDGRIAPSELGILMRSLGGNPTQAQLKAI+AEENLTA
Sbjct: 1   MGKDLSDEQVSSMKEAFSLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIVAEENLTA 60

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDF RFL++M+KHMK EPFDRQLRDAFKVLDK++TG+V VSELRHILT+IGEKLEPSEF
Sbjct: 61  PFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDSTGFVAVSELRHILTNIGEKLEPSEF 120

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 148
           DEWIREV+VG DGKIRYEDFI+RMVAK
Sbjct: 121 DEWIREVDVGSDGKIRYEDFISRMVAK 147

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BLAST of CmoCh16G010920 vs. TrEMBL
Match: A0A0L9UQA5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g008300 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.2e-67
Identity = 129/147 (87.76%), Postives = 142/147 (96.60%), Query Frame = 1


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLSDEQ S+MKEAF+LFD+DGDGRIAPSELGILMRSLGGNPTQAQLK+I+AEENLTA
Sbjct: 1   MGKDLSDEQVSAMKEAFSLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKSIVAEENLTA 60

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDF RFL++M+KHMK EPFDRQLRDAFKVLDK++TG+V VSELRHILT+IGEKLEPSEF
Sbjct: 61  PFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDSTGFVSVSELRHILTNIGEKLEPSEF 120

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 148
           DEWIREV+VG DGKIRYEDFIARMVAK
Sbjct: 121 DEWIREVDVGSDGKIRYEDFIARMVAK 147

[Close]

BLAST of CmoCh16G010920 vs. TrEMBL
Match: A0A0S3T5D9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G207900 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.2e-67
Identity = 129/147 (87.76%), Postives = 142/147 (96.60%), Query Frame = 1


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLSDEQ S+MKEAF+LFD+DGDGRIAPSELGILMRSLGGNPTQAQLK+I+AEENLTA
Sbjct: 1   MGKDLSDEQVSAMKEAFSLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKSIVAEENLTA 60

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDF RFL++M+KHMK EPFDRQLRDAFKVLDK++TG+V VSELRHILT+IGEKLEPSEF
Sbjct: 61  PFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDSTGFVSVSELRHILTNIGEKLEPSEF 120

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 148
           DEWIREV+VG DGKIRYEDFIARMVAK
Sbjct: 121 DEWIREVDVGSDGKIRYEDFIARMVAK 147

[Close]

BLAST of CmoCh16G010920 vs. TAIR10
Match: AT1G12310.1 (AT1G12310.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 252.7 bits (644), Expect = 1.4e-67
Identity = 124/148 (83.78%), Postives = 140/148 (94.59%), Query Frame = 1


Query: 1   MGKD-LSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLT 60
           MGKD LSD+Q SSMKEAF LFD+DGDG+IAPSELGILMRSLGGNPTQAQLK+IIA ENL+
Sbjct: 1   MGKDGLSDDQVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIASENLS 60

Query: 61  APFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSE 120
           +PFDFNRFL++M+KH+K EPFDRQLRDAFKVLDKE TG+V V++LRHILTSIGEKLEP+E
Sbjct: 61  SPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLEPNE 120

Query: 121 FDEWIREVEVGPDGKIRYEDFIARMVAK 148
           FDEWI+EV+VG DGKIRYEDFIARMVAK
Sbjct: 121 FDEWIKEVDVGSDGKIRYEDFIARMVAK 148

[Close]

BLAST of CmoCh16G010920 vs. TAIR10
Match: AT1G62820.1 (AT1G62820.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 244.2 bits (622), Expect = 5.0e-65
Identity = 119/148 (80.41%), Postives = 138/148 (93.24%), Query Frame = 1


Query: 1   MGKD-LSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLT 60
           M KD LS++Q SSMKEAF LFD+DGDG+IAPSELGILMRSLGGNPT++QLK+II  ENL+
Sbjct: 1   MSKDGLSNDQVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTESQLKSIITTENLS 60

Query: 61  APFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSE 120
           +PFDFNRFL++M+KH+K EPFDRQLRDAFKVLDKE TG+V V++LRHILTSIGEKL+PSE
Sbjct: 61  SPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLQPSE 120

Query: 121 FDEWIREVEVGPDGKIRYEDFIARMVAK 148
           FDEWI+EV+VG DGKIRYEDFIARMVAK
Sbjct: 121 FDEWIKEVDVGSDGKIRYEDFIARMVAK 148

[Close]

BLAST of CmoCh16G010920 vs. TAIR10
Match: AT5G21274.1 (AT5G21274.1 calmodulin 6)

HSP 1 Score: 144.8 bits (364), Expect = 4.1e-35
Identity = 71/149 (47.65%), Postives = 101/149 (67.79%), Query Frame = 1


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENL-- 60
           M   L+D+Q S  KEAF+LFD DGDG I   ELG +MRSLG NPT+A+L+ +I E +   
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  TAPFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPS 120
               DF  FL +M++ MK    + +L++AF+V DK+  G++  +ELRH++T++GEKL   
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDE 120

Query: 121 EFDEWIREVEVGPDGKIRYEDFIARMVAK 148
           E DE IRE +V  DG+I YE+F+  M+AK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of CmoCh16G010920 vs. TAIR10
Match: AT3G43810.1 (AT3G43810.1 calmodulin 7)

HSP 1 Score: 144.4 bits (363), Expect = 5.4e-35
Identity = 71/149 (47.65%), Postives = 101/149 (67.79%), Query Frame = 1


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENL-- 60
           M   L+D+Q S  KEAF+LFD DGDG I   ELG +MRSLG NPT+A+L+ +I E +   
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  TAPFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPS 120
               DF  FL +M++ MK    + +L++AF+V DK+  G++  +ELRH++T++GEKL   
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EFDEWIREVEVGPDGKIRYEDFIARMVAK 148
           E DE IRE +V  DG+I YE+F+  M+AK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of CmoCh16G010920 vs. TAIR10
Match: AT3G56800.1 (AT3G56800.1 calmodulin 3)

HSP 1 Score: 143.3 bits (360), Expect = 1.2e-34
Identity = 70/149 (46.98%), Postives = 101/149 (67.79%), Query Frame = 1


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENL-- 60
           M   L+D+Q S  KEAF+LFD DGDG I   ELG +MRSLG NPT+A+L+ +I E +   
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  TAPFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPS 120
               DF  FL +M++ MK    + +L++AF+V DK+  G++  +ELRH++T++GEKL   
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EFDEWIREVEVGPDGKIRYEDFIARMVAK 148
           E DE I+E +V  DG+I YE+F+  M+AK
Sbjct: 121 EVDEMIKEADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of CmoCh16G010920 vs. NCBI nr
Match: gi|449460417|ref|XP_004147942.1| (PREDICTED: probable calcium-binding protein CML13 [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 3.4e-71
Identity = 137/147 (93.20%), Postives = 143/147 (97.28%), Query Frame = 1


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLSD+QKSSM+EAFTLFD+DGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLT+
Sbjct: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFL+IMSKHMK EPFDRQLRDAFKVLDK+NTGYV VSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLDIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVRVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 148
           DEWIREVEVG DG IRYEDFIARMVAK
Sbjct: 121 DEWIREVEVGSDGSIRYEDFIARMVAK 147

[Close]

BLAST of CmoCh16G010920 vs. NCBI nr
Match: gi|659096063|ref|XP_008448907.1| (PREDICTED: probable calcium-binding protein CML13 [Cucumis melo])

HSP 1 Score: 274.6 bits (701), Expect = 9.8e-71
Identity = 136/147 (92.52%), Postives = 143/147 (97.28%), Query Frame = 1


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLSD+QKSSM+EAFTLFD+DGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLT+
Sbjct: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFL+IMSKHMK EPFDRQLRDAFKVLDK+NTG+V VSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLDIMSKHMKPEPFDRQLRDAFKVLDKDNTGFVRVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 148
           DEWIREVEVG DG IRYEDFIARMVAK
Sbjct: 121 DEWIREVEVGSDGSIRYEDFIARMVAK 147

[Close]

BLAST of CmoCh16G010920 vs. NCBI nr
Match: gi|1012128838|ref|XP_015964400.1| (PREDICTED: probable calcium-binding protein CML13 [Arachis duranensis])

HSP 1 Score: 270.0 bits (689), Expect = 2.4e-69
Identity = 134/147 (91.16%), Postives = 141/147 (95.92%), Query Frame = 1


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLSDEQ +SMKEAFTLFD+ G GRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA
Sbjct: 1   MGKDLSDEQVASMKEAFTLFDTSGSGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDF RFL++M+KHMK EPFDRQLRDAFKVLDK+NTGYV VSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFPRFLDLMAKHMKAEPFDRQLRDAFKVLDKDNTGYVSVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 148
           DEWIREV+VGPDGKIRYEDFIARMVAK
Sbjct: 121 DEWIREVDVGPDGKIRYEDFIARMVAK 147

[Close]

BLAST of CmoCh16G010920 vs. NCBI nr
Match: gi|823213626|ref|XP_012439556.1| (PREDICTED: probable calcium-binding protein CML13 [Gossypium raimondii])

HSP 1 Score: 268.1 bits (684), Expect = 9.2e-69
Identity = 132/147 (89.80%), Postives = 142/147 (96.60%), Query Frame = 1


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLSDEQ SSMKEAFTLFD+DGDG+IAPSELGILMRSLGGNPTQAQLKAIIAEE LTA
Sbjct: 1   MGKDLSDEQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKAIIAEEKLTA 60

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDF RFL++MSKHMK EPFDRQLRDAFKVLDK+NTG+V V++LRHILTSIGEKLEPSEF
Sbjct: 61  PFDFPRFLDLMSKHMKPEPFDRQLRDAFKVLDKDNTGFVSVADLRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 148
           DEWIREV+VGPDGKIRYE+FIARMVAK
Sbjct: 121 DEWIREVDVGPDGKIRYEEFIARMVAK 147

[Close]

BLAST of CmoCh16G010920 vs. NCBI nr
Match: gi|763784866|gb|KJB51937.1| (hypothetical protein B456_008G239400, partial [Gossypium raimondii])

HSP 1 Score: 268.1 bits (684), Expect = 9.2e-69
Identity = 132/147 (89.80%), Postives = 142/147 (96.60%), Query Frame = 1


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLSDEQ SSMKEAFTLFD+DGDG+IAPSELGILMRSLGGNPTQAQLKAIIAEE LTA
Sbjct: 60  MGKDLSDEQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKAIIAEEKLTA 119

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDF RFL++MSKHMK EPFDRQLRDAFKVLDK+NTG+V V++LRHILTSIGEKLEPSEF
Sbjct: 120 PFDFPRFLDLMSKHMKPEPFDRQLRDAFKVLDKDNTGFVSVADLRHILTSIGEKLEPSEF 179

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 148
           DEWIREV+VGPDGKIRYE+FIARMVAK
Sbjct: 180 DEWIREVDVGPDGKIRYEEFIARMVAK 206

The following BLAST results are available for this feature:

BLAST of CmoCh16G010920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CML13_ARATH	2.5e-66	83.78	Probable calcium-binding protein CML13 OS=Arabidopsis thaliana GN=CML13 PE=2 SV=...	[more]
CML14_ARATH	8.9e-64	80.41	Probable calcium-binding protein CML14 OS=Arabidopsis thaliana GN=CML14 PE=2 SV=...	[more]
CML7_ORYSJ	1.5e-58	73.97	Probable calcium-binding protein CML7 OS=Oryza sativa subsp. japonica GN=CML7 PE...	[more]
CALM_AGABI	1.9e-34	48.32	Calmodulin OS=Agaricus bisporus PE=1 SV=2	[more]
CALM_MYXGL	2.5e-34	46.98	Calmodulin OS=Myxine glutinosa PE=2 SV=3	[more]

BLAST of CmoCh16G010920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2F2_CUCSA	2.4e-71	93.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G036390 PE=4 SV=1	[more]
A0A0D2Q0R6_GOSRA	6.4e-69	89.80	Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_008G239400 PE=...	[more]
I1LGL7_SOYBN	4.2e-68	88.44	Uncharacterized protein OS=Glycine max GN=GLYMA_11G030100 PE=4 SV=1	[more]
A0A0L9UQA5_PHAAN	1.2e-67	87.76	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g008300 PE=4 SV=1	[more]
A0A0S3T5D9_PHAAN	1.2e-67	87.76	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G207900 PE=...	[more]

BLAST of CmoCh16G010920 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12310.1	1.4e-67	83.78	Calcium-binding EF-hand family protein	[more]
AT1G62820.1	5.0e-65	80.41	Calcium-binding EF-hand family protein	[more]
AT5G21274.1	4.1e-35	47.65	calmodulin 6	[more]
AT3G43810.1	5.4e-35	47.65	calmodulin 7	[more]
AT3G56800.1	1.2e-34	46.98	calmodulin 3	[more]

BLAST of CmoCh16G010920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449460417\|ref\|XP_004147942.1\|	3.4e-71	93.20	PREDICTED: probable calcium-binding protein CML13 [Cucumis sativus]	[more]
gi\|659096063\|ref\|XP_008448907.1\|	9.8e-71	92.52	PREDICTED: probable calcium-binding protein CML13 [Cucumis melo]	[more]
gi\|1012128838\|ref\|XP_015964400.1\|	2.4e-69	91.16	PREDICTED: probable calcium-binding protein CML13 [Arachis duranensis]	[more]
gi\|823213626\|ref\|XP_012439556.1\|	9.2e-69	89.80	PREDICTED: probable calcium-binding protein CML13 [Gossypium raimondii]	[more]
gi\|763784866\|gb\|KJB51937.1\|	9.2e-69	89.80	hypothetical protein B456_008G239400, partial [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G010920.1	CmoCh16G010920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13405	EF-hand_6	coord: 13..41 score: 7.
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 82..144 score: 2.4
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 12..40 score: 3.0E-4coord: 83..111 score: 0.013coord: 119..147 score:
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 115..147 score: 5.754coord: 8..43 score: 12.812coord: 79..114 score: 11
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 8..69 score: 2.0E-20coord: 70..144 score: 3.1
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 5..144 score: 3.06
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 21..33 scor
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 1..147 score: 2.1E
None	No IPR available	PANTHER	PTHR23050:SF214	CALCIUM-BINDING PROTEIN CML14-RELATED	coord: 1..147 score: 2.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh16G010920	Cucsa.320480	Cucumber (Gy14) v1	cgycmoB0886
CmoCh16G010920	CmaCh16G010440	Cucurbita maxima (Rimu)	cmacmoB323
CmoCh16G010920	CmaCh06G007560	Cucurbita maxima (Rimu)	cmacmoB804
CmoCh16G010920	Cla005687	Watermelon (97103) v1	cmowmB295
CmoCh16G010920	Csa3G036390	Cucumber (Chinese Long) v2	cmocuB315
CmoCh16G010920	MELO3C013982	Melon (DHL92) v3.5.1	cmomeB283
CmoCh16G010920	ClCG10G003120	Watermelon (Charleston Gray)	cmowcgB277
CmoCh16G010920	CSPI03G03130	Wild cucumber (PI 183967)	cmocpiB324
CmoCh16G010920	Lsi07G013420	Bottle gourd (USVL1VR-Ls)	cmolsiB316
CmoCh16G010920	Cp4.1LG14g08610	Cucurbita pepo (Zucchini)	cmocpeB308
CmoCh16G010920	Cp4.1LG08g07480	Cucurbita pepo (Zucchini)	cmocpeB329
CmoCh16G010920	MELO3C013982.2	Melon (DHL92) v3.6.1	cmomedB330
CmoCh16G010920	CsaV3_3G003160	Cucumber (Chinese Long) v3	cmocucB0378
CmoCh16G010920	Cla97C10G187660	Watermelon (97103) v2	cmowmbB321
CmoCh16G010920	BhiUN285G27	Wax gourd	cmowgoB0427
CmoCh16G010920	CsGy3G003060	Cucumber (Gy14) v2	cgybcmoB311
CmoCh16G010920	Carg21607	Silver-seed gourd	carcmoB1170
CmoCh16G010920	Carg25274	Silver-seed gourd	carcmoB1164

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh16G010920	CmoCh06G007780	Cucurbita moschata (Rifu)	cmocmoB291

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh16G010920	Cucumber (Gy14) v2	cgybcmoB595
CmoCh16G010920	Melon (DHL92) v3.6.1	cmomedB313
CmoCh16G010920	Cucumber (Chinese Long) v3	cmocucB0399
CmoCh16G010920	Watermelon (97103) v2	cmowmbB308
CmoCh16G010920	Wax gourd	cmowgoB0422
CmoCh16G010920	Cucurbita moschata (Rifu)	cmocmoB237
CmoCh16G010920	Cucurbita moschata (Rifu)	cmocmoB283
CmoCh16G010920	Cucumber (Gy14) v1	cgycmoB0826
CmoCh16G010920	Cucurbita maxima (Rimu)	cmacmoB291
CmoCh16G010920	Cucurbita maxima (Rimu)	cmacmoB589
CmoCh16G010920	Wild cucumber (PI 183967)	cmocpiB339
CmoCh16G010920	Cucumber (Chinese Long) v2	cmocuB331
CmoCh16G010920	Melon (DHL92) v3.5.1	cmomeB276
CmoCh16G010920	Watermelon (Charleston Gray)	cmowcgB283
CmoCh16G010920	Watermelon (97103) v1	cmowmB316
CmoCh16G010920	Cucurbita pepo (Zucchini)	cmocpeB305
CmoCh16G010920	Bottle gourd (USVL1VR-Ls)	cmolsiB287