CmoCh16G010760 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATTGATCAATCCTTCTTTCTCTGATTCTCTTCCCCTTTTCTCGTTCGCTTCAAATTGGTCTCATTCCTTCTCACACCCTTCTGCGAATCTTTCATTTCCCTCTCTCCCCTTCGTTTTCTAGGGTTTTTCTGAATTTTCCCATCAATTTTTTCTCGCTCTTGACAGTTCTGACGTGGGTAATCACCGGAGGAAGTCCATTTTTGTGATTTTCGAGCTTCTGGTCGGGGGTTTTGCCACCGATGACATATTGTGAGACGGATAACGGCCGGAGAGGGGAAGTGGTGGCGGAGGATATAACGGTGGGAATTGGATGTGATGATGGTAACGGAGACTATGTTAGGTTGGGACAGAACCCTTGTAACTGTGAAGCTGAGGTCTCGTCTGATGGGGGTTCTTCGCAGCCTTGTTCTCCAGGAAGGTCTTTGTGGCTTTGGTTTCGTTTGGTGGTGCTGTTCATTTTCTTGGTGTCATTAGCTGTTGTTTTCTTCAAATGGGTAGGACCATTCTTCATGAATAAGGTCAGTGTTTATGTTAAATTTTGACTGCAATTCTGATGTTTTTCTATTGGAATTGAATTATAGAGTGTTGTTGCTTGGATTTTGCTTTTGTATTTTAGGTTTTTGTTGAATTCTTCATGGAATTGCCTTGTCTCTGCTGTTGTGTTTCTGGGTTTGATTTACTTGCTTGGTTTTGAACCTATAAAATTTGGTTCATAAGGTTATTTATTGTGGTAAGATCAAATTCCTCTTGAAGAAAATTCTTTGTATGTTAATGTCATATTGGAATTCAATATGTTTCTTAATTCTTTTTCTTGCAATTTACGTTATTAGGCATTATTCAGCAGCTTTAGATCTTGGGTTATCTTCTGACTATGTTATCTTCTAGTGAAAAGATAATAATCTTGAAGAGTTCAATGAACTGTGTAGTGTTTCATTTTAGCCTGACGGATATGTTATTTGCTACAGGAAATAATACCGATTATAAACTGGGAAGCTGAAACGTTTAGTACTCCGGTGCTGGCAGTTCTCGTTTTCGCCTCGGTTGCATTGTTCCCTTCATTGTTTTTGCCATCTTCACCTTCTATGTGGCTGGCAGGGATGACATTTGGTTATGGTTTTGGGTTCCTGTTAATTATATCAGCAGTAACTATTGGTGTATCACTTCCATATTTCATTGGCTCCCTATTCTATCGTAAAATTCAAGTTAGTGTTTGTTTTAAGTTTATCTTCTATTCGTCAACTGCTCGACATAGTTCGTATCCCTTTGTAGCTAAACTCTGTGGTCTTTATTTTGCAGGGATGGTTAGAAAAATATCCTAAGAGAGCTTCAGTTTTAAGATTAGCAGGCGAAGGAGACTGGATTCATCAGTTTCGCGCGGTAGCACTAATTCGAATTTCACCGTTTCCTTACATAGTATATAATTACTGTGCTGTAGCAACAAATGTCAGATATGGTCCGTACATCTTGGGGTCGCTGATTGGAATGGTGCCAGAAATATTTGTTACAATATACACGTACGTATGCCCCTCGAACCATACTCATACATACACATGATGAATTCCATCTTTCTTGGATGCTTGCTTGTAAATTTACATTCTCTGGCATTTGAAAATTTACGAATCAGCCTCATATTCCTGCTGCAAGAAACGAGAACCCTTTCCACGGCGATACAACTGTTTCATTAGCTAGCTTGGGAACTTTTATGCTGTAAAATGTTAATGGCCTTACTCTCATTTAAGTCGAATCTGATATGACCACATACGTCGTAAGGAAATTCGCCAAACTTTTCATTGACTCATTGATCATAAAGTACATTATTGTGGAATTTATGGAAAATACTCGGAAAAAAAATCGAGGTGGTGATAGTTTAGGGAGTAAATGTCCAGTGTGACTGTGTTGCAGCAAACTAAACTCGTTTATTATCGCTTGAGATTATCCGATACGTGTTAAGGTAGCTCAAATACTCTCAGATATAGGGGGAAAAAACATGGTGTAGGATTAAAGAGTACTCTTTAAACTAAGAAACTTAGTGACATATGTACTTACTAACCCTTGTCGGTTTCTTCGGATTAAATCTACACTGTTTTTCCTCTTTGATATTGCCTGTCTAGTCTTTGAAAATTTCTGTAAAATATTATGGATAAGTTGGATTATGGATATGATTAATCTTCCTTTTGTCACTGTAGTGGCATTTTAATCAGGACATTGGCAGATGCTTCACAAAACCAGCAGTTCCTCTCGGCCCCTCAGATCGCGTTCACGATCGTCGGATTTTGCGTTACTGCAGCCACGACGGTTTTCTTCACTGTATATGCAAAAAGGAAACTCAACGAATTGCAGACAGAAGACGAACAATTATTGCAGTAGTGAGGCTAAAGTTACTTATTATTTGAGCACATAGAGCCACTGGACAATGGTTGCATCGATCGAACAATTTCATATCCATGTTCGGTTTCAAAGAAGCTTCGAGTGAAGGTAAACAAAGAACTATGCAAATATCTTACACTAGATATCATAAATCGATTACGAAACTCACACCGAAAGCATAAAATGAAACGAAACGAAACAAGTATGTTGTGTTTTATCACTTTGTCTGCTTTGAAATCTCGATTTGTAGTGATTGGAATGAGGTATAATGAAGTGAATTAGATTGGATTTAGGCAAATGCAGGGTGGTGGTCTGTATATGAAATGTTGTAGTGTTGTTTGCTGATTATAGTACATAATAATATTCATTCTTCTGCTGCTGAATAGTTTAACAGTGAATCAGTGTGTACAATTCCCATAATTGTTGGCCTCACATGGAAGTTCTTTGTGTTTGCCTTTATCTGTATGCTTGTGATGAGACTGAAGGATAATTGCACTGTGAGATCGAAATGTCTTTAAAAGAATCTTATCTTCTTCTGCT CATTGATCAATCCTTCTTTCTCTGATTCTCTTCCCCTTTTCTCGTTCGCTTCAAATTGGTCTCATTCCTTCTCACACCCTTCTGCGAATCTTTCATTTCCCTCTCTCCCCTTCGTTTTCTAGGGTTTTTCTGAATTTTCCCATCAATTTTTTCTCGCTCTTGACAGTTCTGACGTGGGTAATCACCGGAGGAAGTCCATTTTTGTGATTTTCGAGCTTCTGGTCGGGGGTTTTGCCACCGATGACATATTGTGAGACGGATAACGGCCGGAGAGGGGAAGTGGTGGCGGAGGATATAACGGTGGGAATTGGATGTGATGATGGTAACGGAGACTATGTTAGGTTGGGACAGAACCCTTGTAACTGTGAAGCTGAGGTCTCGTCTGATGGGGGTTCTTCGCAGCCTTGTTCTCCAGGAAGGTCTTTGTGGCTTTGGTTTCGTTTGGTGGTGCTGTTCATTTTCTTGGTGTCATTAGCTGTTGTTTTCTTCAAATGGGTAGGACCATTCTTCATGAATAAGGAAATAATACCGATTATAAACTGGGAAGCTGAAACGTTTAGTACTCCGGTGCTGGCAGTTCTCGTTTTCGCCTCGGTTGCATTGTTCCCTTCATTGTTTTTGCCATCTTCACCTTCTATGTGGCTGGCAGGGATGACATTTGGTTATGGTTTTGGGTTCCTGTTAATTATATCAGCAGTAACTATTGGTGTATCACTTCCATATTTCATTGGCTCCCTATTCTATCGTAAAATTCAAGGATGGTTAGAAAAATATCCTAAGAGAGCTTCAGTTTTAAGATTAGCAGGCGAAGGAGACTGGATTCATCAGTTTCGCGCGGTAGCACTAATTCGAATTTCACCGTTTCCTTACATAGTATATAATTACTGTGCTGTAGCAACAAATGTCAGATATGGTCCGTACATCTTGGGGTCGCTGATTGGAATGGTGCCAGAAATATTTGTTACAATATACACTGGCATTTTAATCAGGACATTGGCAGATGCTTCACAAAACCAGCAGTTCCTCTCGGCCCCTCAGATCGCGTTCACGATCGTCGGATTTTGCGTTACTGCAGCCACGACGGTTTTCTTCACTGTATATGCAAAAAGGAAACTCAACGAATTGCAGACAGAAGACGAACAATTATTGCAGTAGTGAGGCTAAAGTTACTTATTATTTGAGCACATAGAGCCACTGGACAATGGTTGCATCGATCGAACAATTTCATATCCATGTTCGGTTTCAAAGAAGCTTCGAGTGAAGGTAAACAAAGAACTATGCAAATATCTTACACTAGATATCATAAATCGATTACGAAACTCACACCGAAAGCATAAAATGAAACGAAACGAAACAAGTATGTTGTGTTTTATCACTTTGTCTGCTTTGAAATCTCGATTTGTAGTGATTGGAATGAGGTATAATGAAGTGAATTAGATTGGATTTAGGCAAATGCAGGGTGGTGGTCTGTATATGAAATGTTGTAGTGTTGTTTGCTGATTATAGTACATAATAATATTCATTCTTCTGCTGCTGAATAGTTTAACAGTGAATCAGTGTGTACAATTCCCATAATTGTTGGCCTCACATGGAAGTTCTTTGTGTTTGCCTTTATCTGTATGCTTGTGATGAGACTGAAGGATAATTGCACTGTGAGATCGAAATGTCTTTAAAAGAATCTTATCTTCTTCTGCT ATGACATATTGTGAGACGGATAACGGCCGGAGAGGGGAAGTGGTGGCGGAGGATATAACGGTGGGAATTGGATGTGATGATGGTAACGGAGACTATGTTAGGTTGGGACAGAACCCTTGTAACTGTGAAGCTGAGGTCTCGTCTGATGGGGGTTCTTCGCAGCCTTGTTCTCCAGGAAGGTCTTTGTGGCTTTGGTTTCGTTTGGTGGTGCTGTTCATTTTCTTGGTGTCATTAGCTGTTGTTTTCTTCAAATGGGTAGGACCATTCTTCATGAATAAGGAAATAATACCGATTATAAACTGGGAAGCTGAAACGTTTAGTACTCCGGTGCTGGCAGTTCTCGTTTTCGCCTCGGTTGCATTGTTCCCTTCATTGTTTTTGCCATCTTCACCTTCTATGTGGCTGGCAGGGATGACATTTGGTTATGGTTTTGGGTTCCTGTTAATTATATCAGCAGTAACTATTGGTGTATCACTTCCATATTTCATTGGCTCCCTATTCTATCGTAAAATTCAAGGATGGTTAGAAAAATATCCTAAGAGAGCTTCAGTTTTAAGATTAGCAGGCGAAGGAGACTGGATTCATCAGTTTCGCGCGGTAGCACTAATTCGAATTTCACCGTTTCCTTACATAGTATATAATTACTGTGCTGTAGCAACAAATGTCAGATATGGTCCGTACATCTTGGGGTCGCTGATTGGAATGGTGCCAGAAATATTTGTTACAATATACACTGGCATTTTAATCAGGACATTGGCAGATGCTTCACAAAACCAGCAGTTCCTCTCGGCCCCTCAGATCGCGTTCACGATCGTCGGATTTTGCGTTACTGCAGCCACGACGGTTTTCTTCACTGTATATGCAAAAAGGAAACTCAACGAATTGCAGACAGAAGACGAACAATTATTGCAGTAG
BLAST of CmoCh16G010760 vs. TrEMBL
Match: A0A0A0L5R2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G037070 PE=4 SV=1) HSP 1 Score: 548.1 bits (1411), Expect = 6.6e-153 Identity = 278/310 (89.68%), Postives = 290/310 (93.55%), Query Frame = 1
BLAST of CmoCh16G010760 vs. TrEMBL
Match: W9RYK5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023176 PE=4 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 2.0e-112 Identity = 218/306 (71.24%), Postives = 242/306 (79.08%), Query Frame = 1
BLAST of CmoCh16G010760 vs. TrEMBL
Match: I1MUW3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G136900 PE=4 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 2.2e-111 Identity = 207/307 (67.43%), Postives = 244/307 (79.48%), Query Frame = 1
BLAST of CmoCh16G010760 vs. TrEMBL
Match: A0A0B2P9N9_GLYSO (TVP38/TMEM64 family membrane protein OS=Glycine soja GN=glysoja_030916 PE=4 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 1.1e-110 Identity = 204/306 (66.67%), Postives = 242/306 (79.08%), Query Frame = 1
BLAST of CmoCh16G010760 vs. TrEMBL
Match: K7KN09_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G054500 PE=4 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 1.1e-110 Identity = 204/306 (66.67%), Postives = 242/306 (79.08%), Query Frame = 1
BLAST of CmoCh16G010760 vs. TAIR10
Match: AT1G12450.1 (AT1G12450.1 SNARE associated Golgi protein family) HSP 1 Score: 343.6 bits (880), Expect = 1.3e-94 Identity = 177/304 (58.22%), Postives = 224/304 (73.68%), Query Frame = 1
BLAST of CmoCh16G010760 vs. TAIR10
Match: AT4G22850.1 (AT4G22850.1 SNARE associated Golgi protein family) HSP 1 Score: 334.3 bits (856), Expect = 7.6e-92 Identity = 168/288 (58.33%), Postives = 212/288 (73.61%), Query Frame = 1
BLAST of CmoCh16G010760 vs. TAIR10
Match: AT4G12000.1 (AT4G12000.1 SNARE associated Golgi protein family) HSP 1 Score: 312.0 bits (798), Expect = 4.1e-85 Identity = 169/310 (54.52%), Postives = 209/310 (67.42%), Query Frame = 1
BLAST of CmoCh16G010760 vs. TAIR10
Match: AT2G02370.1 (AT2G02370.1 SNARE associated Golgi protein family) HSP 1 Score: 243.4 bits (620), Expect = 1.8e-64 Identity = 118/245 (48.16%), Postives = 164/245 (66.94%), Query Frame = 1
BLAST of CmoCh16G010760 vs. TAIR10
Match: AT1G22850.1 (AT1G22850.1 SNARE associated Golgi protein family) HSP 1 Score: 63.9 bits (154), Expect = 1.9e-10 Identity = 53/194 (27.32%), Postives = 94/194 (48.45%), Query Frame = 1
BLAST of CmoCh16G010760 vs. NCBI nr
Match: gi|449460447|ref|XP_004147957.1| (PREDICTED: transmembrane protein 64-like [Cucumis sativus]) HSP 1 Score: 548.1 bits (1411), Expect = 9.5e-153 Identity = 278/310 (89.68%), Postives = 290/310 (93.55%), Query Frame = 1
BLAST of CmoCh16G010760 vs. NCBI nr
Match: gi|659096108|ref|XP_008448930.1| (PREDICTED: LOW QUALITY PROTEIN: Golgi apparatus membrane protein TVP38-like [Cucumis melo]) HSP 1 Score: 548.1 bits (1411), Expect = 9.5e-153 Identity = 279/310 (90.00%), Postives = 287/310 (92.58%), Query Frame = 1
BLAST of CmoCh16G010760 vs. NCBI nr
Match: gi|703143739|ref|XP_010108090.1| (hypothetical protein L484_023176 [Morus notabilis]) HSP 1 Score: 413.7 bits (1062), Expect = 2.8e-112 Identity = 218/306 (71.24%), Postives = 242/306 (79.08%), Query Frame = 1
BLAST of CmoCh16G010760 vs. NCBI nr
Match: gi|356565329|ref|XP_003550894.1| (PREDICTED: transmembrane protein 64-like [Glycine max]) HSP 1 Score: 410.2 bits (1053), Expect = 3.1e-111 Identity = 207/307 (67.43%), Postives = 244/307 (79.48%), Query Frame = 1
BLAST of CmoCh16G010760 vs. NCBI nr
Match: gi|734321912|gb|KHN04322.1| (TVP38/TMEM64 family membrane protein [Glycine soja]) HSP 1 Score: 407.9 bits (1047), Expect = 1.5e-110 Identity = 204/306 (66.67%), Postives = 242/306 (79.08%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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