ClCG00G000070 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCTAATCATTTCATCCGTTTTTCCTTTTTCACAATACAAAATTGTTTCACGGAATTTCTTTCTTGCTTTTCAGTTTCAAGTTTTCCTTTCTTTCTTTCTTTCTCTCATTCATCAATTCCTCCTTTCTCTGATTCCCTTCCACTCTTCTTCTTCCCATCAAATCCGTTTCATTTCCTTCTTTACACCCTTCTGCAATTCCTTCACTTTTCTAGGGTTTTCTGAAATTTCCCATCAATTCTTTTCTCGATTTCTACCGTTTTACATACAGTTCTGACGTGGGTGTTACGAGGGGAAACCCATTTTTCTGATTTTTGAGCTTCTGGGGGTTTCGGCCACCGATGACATATAATGAGACGGATAACGGCCGGAGAGGAGAAGTGGTGGCGGAGGATATCGAGGTGGGAATTGGATGTGATGATGACAATGGCGATTATGTTAGATTGAGACAGAGCCCTTGTAATTGTGAACCTGAGGTCTCCTCTGATGGGGGTTCTTCTTCTCAGCCTTGTTCTCCAGGAAGGTCTTTGTGGCTTTGGGTTCGTTTGGTGGTGTTGTTCGTTTTCTTGGTCTCATTAGCTGTTGTTTTTTTCAAATGGGTTGGGCCATTTTTCATGAATAAGGTCAGTGTTTATGTTTAATTTTGACTCCAACTCTGATTTTTCCATTGAAATTGAATTACATACTGTTGTTGCTTGGATTTCGCTTTTGTATATTGCAATTGGGTTCGTAATTGTTGACTGGTATTTTATGTTTTTGTTGAATTTTTCATGCCAAATGGCCTTGTATGTGCTGTTGTTTTCTGGGTTTGATTTACTTGCTTCGTTTAAGTATAGGTTTTTAAAATTTTATTTTTTAATTGCAAGTTGTGGGTTCTGTAACTTCTTTCCATACGGCCCTGAAATGAATATGGGGATACTTATCTAATATGTATCTTAAACTGTATCAGTACATTTTAACTAAATGCTGCTGCTGTTCTGCTGGGTTGTGTTTAAGCTCTGTGATGTGTTATTTGTTACTGGGTTTTGGTTGGTCCATAATGTCACTTATTGTGGTAAGATCACATTCCTGTTTAAGAAAATTCTTTGTATGGTAATGTCGTGTTGATATTCAACATGTTTCTCAGTTATTCTTCTTGCAATTTACGTTGTTAGGCTTTGTTCAGCAGCTTTAGTTCATGTGTTTTCGTATGATCATGTTATGTTCCAGTTAGAAGAAAACTAAATGTTTTATGTGGCTATTACGATGACCATGCAATGCATTAGTTTCACAATTGACTCTAAAACCAAACGTGATGTCTAATCTTTGGGATTTTTACATTTCAAAGATCGTGGTGTCTAATTTCTGGTGTTTCATTTGCCACAGGAAATAATACCAATTATAAATTGGGAAGCTGAGACGCTTAGTACTCCAGTGCTGGCAATTTTCGTTTTCGCCTCAGTAGCACTGTTCCCTTCATTGTTTTTACCATCTTCACCTTCTATGTGGCTGGCAGGGATGACATTTGGTTATGGCTTTGGGTTCCTGATAATTATATCAGCAGTAACTATTGGTGTATCACTTCCATATTTCATTGGCTCCCTATTCTATCGTAAAATTCAAGTTAGTATTTGTTTTAAATTTATATCCTATAAATTTATCAAATGCTCAACATAATTTGTATCCCTTTATAGCTAAACTCTGTTTTCCTTTCATACAGGGATGGTTAGACAAATATCCTAAGAGAGCTTCTGTTTTAAGATTAGCAGGCGAAGGAGACTGGATTCATCAGTTTCGTGCGGTAGCACTAATTCGGATTTCTCCATTTCCTTACATTATATATAATTACTGTGCTGTAGCAACCAATGTCAGATATGGTCCGTACATCTTGGGGTCACTGGTTGGAATGGTGCCGGAAATATTTGTTACAATATACACGTACGTATGCCTATCTTGACCTTGAACCCTACTCATACATGCACATGGTGAATTTCATTTTTCTTGAATGCTTGCTTNCCAAATGGCCTTGTATGTGCTGTTGTTTTCTGGGTTTGATTTACTTGCTTCGTTTAAGTATAGGTTTTTAAAATTTTATTTTTTAATTGCAAGTTGTGGGTTCTGTAACTTCTTTCCATACGGCCCTGAAATGAATATGGGGATACTTATCTAATATGTATCTTAAACTGTATCAGTACATTTTAACTAAATGCTGCTGCTGTTCTGCTGGGTTGTGTTTAAGCTCTGTGATGTGTTATTTGTTACTGGGTTTTGGTTGGTCCATAATGTCACTTATTGTGGTAAGATCACATTCCTGTTTAAGAAAATTCTTTGTATGGTAATGTCGTGTTGATATTCAACATGTTTCTCAGTTATTCTTCTTGCAATTTACGTTGTTAGGCTTTGTTCAGCAGCTTTAGTTCATGTGTTTTCGTATGATCATGTTATGTTCCAGTTAGAAGAAAACTAAATGTTTTATGTGGCTATTACGATGACCATGCAATGCATTAGTTTCACAATTGACTCTAAAACCAAACGTGATGTCTAATCTTTGGGATTTTTACATTTCAAAGATCGTGGTGTCTAATTTCTGGTGTTTCATTTGCCACAGGAAATAATACCAATTATAAATTGGGAAGCTGAGACGCTTAGTACTCCAGTGCTGGCAATTTTCGTTTTCGCCTCAGTAGCACTGTTCCCTTCATTGTTTTTACCATCTTCACCTTCTATGTGGCTGGCAGGGATGACATTTGGTTATGGCTTTGGGTTCCTGATAATTATATCAGCAGTAACTATTGGTGTATCACTTCCATATTTCATTGGCTCCCTATTCTATCGTAAAATTCAAGTTAGTATTTGTTTTAAATTTATATCCTATAAATTTATCAAATGCTCAACATAATTTGTATCCCTTTATAGCTAAACTCTGTTTTCCTTTCATACAGGGATGGTTAGACAAATATCCTAAGAGAGCTTCTGTTTTAAGATTAGCAGGCGAAGGAGACTGGATTCATCAGTTTCGTGCGGTAGCACTAATTCGGATTTCTCCATTTCCTTACATTATATATAATTACTGTGCTGTAGCAACCAATGTCAGATATGGTCCGTACATCTTGGGGTCACTGGTTGGAATGGTGCCGGAAATATTTGTTACAATATACACGTACGTATGCCTATCTTGACCTTGAACCCTACTCATACATGCACATGGTGAATTTCATTTTTCTTGAATGCTTGCTTGTAAATCTACATTAAGGATTTCTCTGGCATTTAAACACATGAGAATCAGCATCATATTCCTACAGCAAGAAACGAAAACCCTTTCCAGATCAATACAACCTGCTCATTAGTTTGCTTGGGAACTTTTACACTGTAAAATGTAAGTTATGAAAATGCCCAACTCTCATTTAAGTCGATTCTGATAAGACCCCCTATGTCCAAAAGCAATATGATCGAACCAAACTTTTCATTGACTCATTGTATTTTGCCCTTTTTATAAATTTCTTTTTTACATACAACGTGACTGTTGCAGTAAAACTAAACTCGTCCATTATCTCTTGTCACAACCTTAGTCTAACTGTGAATGGTTGATATGAAATCTAAACTATTTTTCCTATTTGATATTGCCCATCTACTCTTTGAAAATTTCTGCAAAATATTGTAGATAATTTAGTTTATGAATATTTTATTAATCTAGGTGATATAAGCTTTGAAATGATTGGATGCTCTTTCTCAAATAGCTCTCTCAAATAGATCATTTGAGACAGTTCTTTTTACCTGAAGAAAACCCGTAGAACTTCATTTTTCCTTTCTTAAAATGTGAATAGATACTTATTTACCTAAGCTTTCATTATCTTCCTTTTGTTACTGCAGTGGCATTTTAATCAGAACACTGGCAGATGCTTCGCAAAATCAGCAGTTCCTGTCGCCCCCCCAGATCGTGTTCACGGTCGTTGGGTTTTGCGTTACTGCAGCTACTACAGTTTTCTTCACTGTATATGCAAAAAGGAAACTCAAGGAATTGCAGATAGAAGACGATCAATTATTGCAGTAGTAAGGTCTCTTCCTTAGCCAGGCTAAACTTACTTATTTGAGCACATAGAGCTGATGGACAATGATTGCATCAATCGAACAATTTCATATCAATGTTCGGTTTCAAGGAAGCTTCAAGTAAAGGAAACAAAGAATAGTGCAAATATCATACACCAGATATCATAAGCCGATTACAAAACTCACACCCAAAAGTATGTAACGGAACGAAACAAGTATGCTGTCTTTTATCTCTATGTCTGCTTTCAAATCTCAATTGTAATGGTTGGAATGAATTATTGGATTGGATTGGATTTAGGCAAATGCAGAGTCTGTATATGAAATGTTATAGTGTTGTTTGGTGATGATGGTACATAATATTAATTCTTCTGCTGCTGAGTTCATTGTCACTCAATAGTTT TTTCTAATCATTTCATCCGTTTTTCCTTTTTCACAATACAAAATTGTTTCACGGAATTTCTTTCTTGCTTTTCAGTTTCAAGTTTTCCTTTCTTTCTTTCTTTCTCTCATTCATCAATTCCTCCTTTCTCTGATTCCCTTCCACTCTTCTTCTTCCCATCAAATCCGTTTCATTTCCTTCTTTACACCCTTCTGCAATTCCTTCACTTTTCTAGGGTTTTCTGAAATTTCCCATCAATTCTTTTCTCGATTTCTACCGTTTTACATACAGTTCTGACGTGGGTGTTACGAGGGGAAACCCATTTTTCTGATTTTTGAGCTTCTGGGGGTTTCGGCCACCGATGACATATAATGAGACGGATAACGGCCGGAGAGGAGAAGTGGTGGCGGAGGATATCGAGGTGGGAATTGGATGTGATGATGACAATGGCGATTATGTTAGATTGAGACAGAGCCCTTGTAATTGTGAACCTGAGGTCTCCTCTGATGGGGGTTCTTCTTCTCAGCCTTGTTCTCCAGGAAGGTCTTTGTGGCTTTGGGTTCGTTTGGTGGTGTTGTTCGTTTTCTTGGTCTCATTAGCTGTTGTTTTTTTCAAATGGGTTGGGCCATTTTTCATGAATAAGGAAATAATACCAATTATAAATTGGGAAGCTGAGACGCTTAGTACTCCAGTGCTGGCAATTTTCGTTTTCGCCTCAGTAGCACTGTTCCCTTCATTGTTTTTACCATCTTCACCTTCTATGTGGCTGGCAGGGATGACATTTGGTTATGGCTTTGGGTTCCTGATAATTATATCAGCAGTAACTATTGGTGTATCACTTCCATATTTCATTGGCTCCCTATTCTATCGTAAAATTCAAGGATGGTTAGACAAATATCCTAAGAGAGCTTCTGTTTTAAGATTAGCAGGCGAAGGAGACTGGATTCATCAGTTTCGTGCGGTAGCACTAATTCGGATTTCTCCATTTCCTTACATTATATATAATTACTGTGCTGTAGCAACCAATGTCAGATATGGTCCGTACATCTTGGGGTCACTGGTTGGAATGGTGCCGGAAATATTTGAAATAATACCAATTATAAATTGGGAAGCTGAGACGCTTAGTACTCCAGTGCTGGCAATTTTCGTTTTCGCCTCAGTAGCACTGTTCCCTTCATTGTTTTTACCATCTTCACCTTCTATGTGGCTGGCAGGGATGACATTTGGTTATGGCTTTGGGTTCCTGATAATTATATCAGCAGTAACTATTGGTGTATCACTTCCATATTTCATTGGCTCCCTATTCTATCGTAAAATTCAATGGCATTTTAATCAGAACACTGGCAGATGCTTCGCAAAATCAGCAGTTCCTGTCGCCCCCCCAGATCGTGTTCACGGTCGTTGGGTTTTGCGTTACTGCAGCTACTACAGTTTTCTTCACTGTATATGCAAAAAGGAAACTCAAGGAATTGCAGATAGAAGACGATCAATTATTGCAGTAGTAAGGTCTCTTCCTTAGCCAGGCTAAACTTACTTATTTGAGCACATAGAGCTGATGGACAATGATTGCATCAATCGAACAATTTCATATCAATGTTCGGTTTCAAGGAAGCTTCAAGTAAAGGAAACAAAGAATAGTGCAAATATCATACACCAGATATCATAAGCCGATTACAAAACTCACACCCAAAAGTATGTAACGGAACGAAACAAGTATGCTGTCTTTTATCTCTATGTCTGCTTTCAAATCTCAATTGTAATGGTTGGAATGAATTATTGGATTGGATTGGATTTAGGCAAATGCAGAGTCTGTATATGAAATGTTATAGTGTTGTTTGGTGATGATGGTACATAATATTAATTCTTCTGCTGCTGAGTTCATTGTCACTCAATAGTTT ATGACATATAATGAGACGGATAACGGCCGGAGAGGAGAAGTGGTGGCGGAGGATATCGAGGTGGGAATTGGATGTGATGATGACAATGGCGATTATGTTAGATTGAGACAGAGCCCTTGTAATTGTGAACCTGAGGTCTCCTCTGATGGGGGTTCTTCTTCTCAGCCTTGTTCTCCAGGAAGGTCTTTGTGGCTTTGGGTTCGTTTGGTGGTGTTGTTCGTTTTCTTGGTCTCATTAGCTGTTGTTTTTTTCAAATGGGTTGGGCCATTTTTCATGAATAAGGAAATAATACCAATTATAAATTGGGAAGCTGAGACGCTTAGTACTCCAGTGCTGGCAATTTTCGTTTTCGCCTCAGTAGCACTGTTCCCTTCATTGTTTTTACCATCTTCACCTTCTATGTGGCTGGCAGGGATGACATTTGGTTATGGCTTTGGGTTCCTGATAATTATATCAGCAGTAACTATTGGTGTATCACTTCCATATTTCATTGGCTCCCTATTCTATCGTAAAATTCAAGGATGGTTAGACAAATATCCTAAGAGAGCTTCTGTTTTAAGATTAGCAGGCGAAGGAGACTGGATTCATCAGTTTCGTGCGGTAGCACTAATTCGGATTTCTCCATTTCCTTACATTATATATAATTACTGTGCTGTAGCAACCAATGTCAGATATGGTCCGTACATCTTGGGGTCACTGGTTGGAATGGTGCCGGAAATATTTGAAATAATACCAATTATAAATTGGGAAGCTGAGACGCTTAGTACTCCAGTGCTGGCAATTTTCGTTTTCGCCTCAGTAGCACTGTTCCCTTCATTGTTTTTACCATCTTCACCTTCTATGTGGCTGGCAGGGATGACATTTGGTTATGGCTTTGGGTTCCTGATAATTATATCAGCAGTAACTATTGGTGTATCACTTCCATATTTCATTGGCTCCCTATTCTATCGTAAAATTCAATGGCATTTTAATCAGAACACTGGCAGATGCTTCGCAAAATCAGCAGTTCCTGTCGCCCCCCCAGATCGTGTTCACGGTCGTTGGGTTTTGCGTTACTGCAGCTACTACAGTTTTCTTCACTGTATATGCAAAAAGGAAACTCAAGGAATTGCAGATAGAAGACGATCAATTATTGCAGTAGTAAGGTCTCTTCCTTAG MTYNETDNGRRGEVVAEDIEVGIGCDDDNGDYVRLRQSPCNCEPEVSSDGGSSSQPCSPGRSLWLWVRLVVLFVFLVSLAVVFFKWVGPFFMNKEIIPIINWEAETLSTPVLAIFVFASVALFPSLFLPSSPSMWLAGMTFGYGFGFLIIISAVTIGVSLPYFIGSLFYRKIQGWLDKYPKRASVLRLAGEGDWIHQFRAVALIRISPFPYIIYNYCAVATNVRYGPYILGSLVGMVPEIFEIIPIINWEAETLSTPVLAIFVFASVALFPSLFLPSSPSMWLAGMTFGYGFGFLIIISAVTIGVSLPYFIGSLFYRKIQWHFNQNTGRCFAKSAVPVAPPDRVHGRWVLRYCSYYSFLHCICKKETQGIADRRRSIIAVVRSLP
BLAST of ClCG00G000070 vs. TrEMBL
Match: A0A0A0L5R2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G037070 PE=4 SV=1) HSP 1 Score: 460.3 bits (1183), Expect = 2.3e-126 Identity = 228/249 (91.57%), Postives = 235/249 (94.38%), Query Frame = 1
BLAST of ClCG00G000070 vs. TrEMBL
Match: A0A0A0L5R2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G037070 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 3.5e-34 Identity = 75/79 (94.94%), Postives = 77/79 (97.47%), Query Frame = 1
HSP 2 Score: 337.4 bits (864), Expect = 2.3e-89 Identity = 168/244 (68.85%), Postives = 195/244 (79.92%), Query Frame = 1
BLAST of ClCG00G000070 vs. TrEMBL
Match: M5WDB5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009211mg PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.7e-28 Identity = 62/79 (78.48%), Postives = 72/79 (91.14%), Query Frame = 1
HSP 2 Score: 335.9 bits (860), Expect = 6.6e-89 Identity = 166/241 (68.88%), Postives = 186/241 (77.18%), Query Frame = 1
BLAST of ClCG00G000070 vs. TrEMBL
Match: W9RYK5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023176 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.9e-28 Identity = 66/98 (67.35%), Postives = 76/98 (77.55%), Query Frame = 1
HSP 2 Score: 332.0 bits (850), Expect = 9.5e-88 Identity = 162/244 (66.39%), Postives = 195/244 (79.92%), Query Frame = 1
BLAST of ClCG00G000070 vs. TrEMBL
Match: A0A151SNU3_CAJCA (TVP38/TMEM64 family membrane protein slr0305 family OS=Cajanus cajan GN=KK1_002658 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 3.2e-27 Identity = 63/110 (57.27%), Postives = 79/110 (71.82%), Query Frame = 1
HSP 2 Score: 328.6 bits (841), Expect = 1.0e-86 Identity = 159/246 (64.63%), Postives = 192/246 (78.05%), Query Frame = 1
BLAST of ClCG00G000070 vs. TAIR10
Match: AT1G12450.1 (AT1G12450.1 SNARE associated Golgi protein family) HSP 1 Score: 291.2 bits (744), Expect = 9.4e-79 Identity = 145/241 (60.17%), Postives = 175/241 (72.61%), Query Frame = 1
HSP 2 Score: 114.4 bits (285), Expect = 1.6e-25 Identity = 52/79 (65.82%), Postives = 62/79 (78.48%), Query Frame = 1
BLAST of ClCG00G000070 vs. TAIR10
Match: AT4G22850.1 (AT4G22850.1 SNARE associated Golgi protein family) HSP 1 Score: 280.0 bits (715), Expect = 2.2e-75 Identity = 133/231 (57.58%), Postives = 167/231 (72.29%), Query Frame = 1
HSP 2 Score: 119.8 bits (299), Expect = 3.7e-27 Identity = 53/79 (67.09%), Postives = 63/79 (79.75%), Query Frame = 1
BLAST of ClCG00G000070 vs. TAIR10
Match: AT4G12000.1 (AT4G12000.1 SNARE associated Golgi protein family) HSP 1 Score: 262.3 bits (669), Expect = 4.7e-70 Identity = 130/249 (52.21%), Postives = 166/249 (66.67%), Query Frame = 1
HSP 2 Score: 105.9 bits (263), Expect = 5.6e-23 Identity = 48/79 (60.76%), Postives = 59/79 (74.68%), Query Frame = 1
BLAST of ClCG00G000070 vs. TAIR10
Match: AT2G02370.1 (AT2G02370.1 SNARE associated Golgi protein family) HSP 1 Score: 203.8 bits (517), Expect = 2.0e-52 Identity = 93/190 (48.95%), Postives = 123/190 (64.74%), Query Frame = 1
HSP 2 Score: 97.4 bits (241), Expect = 2.0e-20 Identity = 47/88 (53.41%), Postives = 59/88 (67.05%), Query Frame = 1
BLAST of ClCG00G000070 vs. TAIR10
Match: AT1G22850.1 (AT1G22850.1 SNARE associated Golgi protein family) HSP 1 Score: 60.5 bits (145), Expect = 2.7e-09 Identity = 42/129 (32.56%), Postives = 68/129 (52.71%), Query Frame = 1
BLAST of ClCG00G000070 vs. NCBI nr
Match: gi|449460447|ref|XP_004147957.1| (PREDICTED: transmembrane protein 64-like [Cucumis sativus]) HSP 1 Score: 460.3 bits (1183), Expect = 3.3e-126 Identity = 228/249 (91.57%), Postives = 235/249 (94.38%), Query Frame = 1
BLAST of ClCG00G000070 vs. NCBI nr
Match: gi|449460447|ref|XP_004147957.1| (PREDICTED: transmembrane protein 64-like [Cucumis sativus]) HSP 1 Score: 154.1 bits (388), Expect = 5.1e-34 Identity = 75/79 (94.94%), Postives = 77/79 (97.47%), Query Frame = 1
HSP 2 Score: 458.8 bits (1179), Expect = 9.6e-126 Identity = 227/249 (91.16%), Postives = 232/249 (93.17%), Query Frame = 1
BLAST of ClCG00G000070 vs. NCBI nr
Match: gi|659096108|ref|XP_008448930.1| (PREDICTED: LOW QUALITY PROTEIN: Golgi apparatus membrane protein TVP38-like [Cucumis melo]) HSP 1 Score: 150.6 bits (379), Expect = 5.6e-33 Identity = 73/79 (92.41%), Postives = 75/79 (94.94%), Query Frame = 1
HSP 2 Score: 337.4 bits (864), Expect = 3.2e-89 Identity = 168/244 (68.85%), Postives = 195/244 (79.92%), Query Frame = 1
BLAST of ClCG00G000070 vs. NCBI nr
Match: gi|595857343|ref|XP_007210525.1| (hypothetical protein PRUPE_ppa009211mg [Prunus persica]) HSP 1 Score: 135.2 bits (339), Expect = 2.4e-28 Identity = 62/79 (78.48%), Postives = 72/79 (91.14%), Query Frame = 1
HSP 2 Score: 335.9 bits (860), Expect = 9.4e-89 Identity = 166/241 (68.88%), Postives = 186/241 (77.18%), Query Frame = 1
BLAST of ClCG00G000070 vs. NCBI nr
Match: gi|703143739|ref|XP_010108090.1| (hypothetical protein L484_023176 [Morus notabilis]) HSP 1 Score: 134.4 bits (337), Expect = 4.2e-28 Identity = 66/98 (67.35%), Postives = 76/98 (77.55%), Query Frame = 1
HSP 2 Score: 334.0 bits (855), Expect = 3.6e-88 Identity = 170/246 (69.11%), Postives = 199/246 (80.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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