CmoCh16G010590 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh16G010590
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	DNA replication factor C complex subunit 2
Location	Cmo_Chr16 : 7436229 .. 7443521 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGGCGCGAAGTGGGAAGGGCCGAGTTTCTCCTTCAAATTGTTCTACCCATCCTCGAACAGCCACATTCATCTGTGCAAGGACAAAGAAAATCCATGGCGTCTTCTTCAGGAAGCAGCAGCAGCAGCTACGACATGCCATGGGTGGAGAAGTACAGGCCCAGCAAGGTCGCTGACATTGTAGGCAACGAAGAAGCAGTTTCTCGGCTCCAAGTCATTGCTCGCGACGGCAACATGCCCAATTTCATATTATCTGTACTTCTCCATCGCTTTTTCCTCCCGGAATTTTCACTGTTCAATTTACATTGCCGCCATTGATGTCGTAGTTCAGTTATGGGACATAGGGTTGCTTAATTTTTAAACTTAGTTATGTGAAGTAGGAAATCATGCAGCTTGAACATTTTTTTCATTCTTTGAACTGTTTTCATGGGCACCGGGGGATTTGGGAACTAATAAGGCTCGAATTTTATCCTGTTTTTTATTATTTTTGGGGGGTTTTAGTGTACTGCAGTGAAATATACTAAAAAATTCATTCACAATTGGTAGGGGGCAAGTGAAATTCAAAAGGTTCTAATCATGTGGGATGAGGTTTTTCCTTTTGTCTTGCTATTGGTGATACTCTGTTGCTATATATTTGTTTTCTAGGGTCCGCCTGGAACTGGGAAGACAACCAGTATTCTGGCTCTTGCTCACGAGCTTTTGGGACCAAATTACAAGGATGGTGTTCTGGAGCTTAATGCATCAGATGAAAGGTGGCACCTTCTATGCTTTTTATGCTTCAAACATTTCCAATGTTACTGGATCTGTATGTTTTTCTAACCTGTGTTCTTGTTTAGGGGAATCGACGTTGTGAGGAACAAAATCAAGATGTTTGCTCAAAAGAAAGTAACCTTGCCTCCTGGTCGACACAAAGTGGTAATATTGGACGAAGCTGACAGGTAGGTTTCAATGGACATATGCTAAGAAACATGGACACTCTCTTTTGTATAGTGTTTTTAGCATTCTTGTTTATTTTTATTTTGTCCAATTTGGAACACACATGGAACACATCTGGTCGTGTAGGGGACACGTCGTTGTACAAAAATTGATCAAGAATTTAGAAAGAAAAAATGTTTAATCCATCTCATTACTTCATGTCCTTTGCTCAAACCATTACTTACCTTATTATAATCAGCCCTAAAATTTCATGAAGAAATTGTGGGGGGAGGGACACACTACTCACTGTTTCAAGCACATTCATTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTGTTAAATTCACGTATCTTGTCTATTTTGAAGTGTCAAATATGTTTGTAGTCTCATTTGAACTGAAAAAGATGTCTGTCTGTCTACCCCTACAAAAGAAGAAGAAAATGAAAGAGGAAATAGAAACCACAGTAACAAAGCTGCTGAGCTCCGGAACCTTTGAACATGCACATCTTCTATAAAAAAAAAAATATATATTCCCAATGTGTCCATGTTGTACATTTGTATAAATTAACAAATTGACATGTCGGTGTCCGTGTCATAATCATGTTTCATGTCTGTGTTCGTACTTGTTTCTTAGGGTATATGACACATCTCATAGTCATAGGTTATATGATCTAACCATATCTAAAAGATTGTTTTCTGCGTGCAAGTTCCACTTTCGTGTCACTATTTGGTCCTAAATGGAACCAAGAAGTTCTTTCTCGGGAGATTTTCTTTGTTTCCTCCTCCCCTTCCTTTTCGCATTTGTATCCCTCACCTAATTTTATTTTCTTTTGCTTTGCTGTTCATTTTCTGACTTTGGGTTCCATTATTTATTTATTACTTTTGGGGATGGTTATGATTATGGAAATAATCCAGCATGACAACTGGAGCACAACAAGCTTTGAGGCGTACAATGGAAATATATTCGAACACAACACGTTTTGCACTTGCATGTAATACCTCCTCAAAAATTATCGAGCCTATTCAGAGTAGATGTGCAATTGTCCGATTTTCAAGATTAACAGATCAAGAGATTCTTGGGCGCCTTATGGTGGTACTTCAAGCAGAAAAGGTATCAATTATTTGTGATAATGATTAGAGATGCATTCCAGACTACATTTCTGTTGTTATAAATACAATCACTCTGCTAAATTTAATTGTTCTTATAAACTTAATGCCGCTTGATTATCTTCTGAAGAAAGTATCACTTTATTGAAAGGCTGAAAGCATCACTATGTTTAGATCTCATGCCATTGTTTTATTATGCATTGTCTCATTGTTCTTTTGTGCAATTTTTTTATGGAAATGGCTAGCTTGTTTAGTAATCATTGGTCATATTTTTAAGCTGTATTGTTCAAAAGGATAAAGAGCCTTGTTCCTCTCAAAACTACTTGTGTAGGCCTGAATTTCTCATAGATATGTGTCTTAAAATTGCACCTAAACAAAGTAAAATGTTAATATTGCTGATTGTTCATGTTAGAAACTTGTGGAAGGGAAGGTTCGGCACTTGTCATGTTGCCTTCTTTTCAGTACTCTCTCACTTTTTGTAGCGTTCCCTTCGTGTATCTCCTATATGCATATATATTAGGGCTATAAGTTAGTCAATTGGTGTTGATTTCATTAAATGGAAACCGATAGGTTTATGGGGTGCAAGCAACCAACTAATCCTAGTTTGTTAGTTTTCCTTTTTTTAAAAAAATAAAATAAAAATAAATAAATAATTAAAAAATCATCATTATTATTTTAATAATCAATGAACATAATATTAAAAATCATTTTTTTTTAGAAAGATATTCGTTTTTTTTCTTTCGGGAGCCCATTAGATATTTACCTAAACCAGTAGGTAGGTCCTTGAGTAGATCTCACGTTAGCCCCAAGACGAGTAAATGCTTGAGCTATTTTTTAGGTTTCTTAGTATATGTTATAACTTTTGAAGGATTTAACTCCAAGATTTTGTATTATATCTTATTTTATTTTAGGCTATGAGAATACAATTTTCCGTTCTCTCAAACTCTTCGGTGGGTGGTAGGCATCCATCAATAGGCTAGCTATCAAAGGGGTAGACACAAGTTTTGAAGGGATTATATTTCTTTCAACTACTAAATTAAGCTCTTGGGTCTCCTTGGTTGGATGTGAGCTTAGCTAACTTCCGACCTACCATCATGGTCTCCCTTTTGGGGGTAATTTGTGGAGTATGATCTTATGGAGCCCTGTTTTAGACTAGGTTCATAAAATGTTTCTCCTTGGAAACATGCTTTTTTCTCAAGGTGGGTCGGCTCACCCTTATCCAGTCTGTGCTGAGTGTTATCTCCAATTACTTCTTATCCCTTTTTCAAGATCTCGGTCCAATCTAAAGTGTTTGACTAGCTTAATCTGGAAGCATAAAAGCCCAAAGAAAATCCCAGTTTTCTTTCGTCCTTGGCCTTTTGAAGCCTAAATACTGATGATAGGCTGCAAAGGAAGTTCAAAGACTGGTCTCTTCTTCCTTCTAGATGCAGATTATGTTGGCAACTTATATTGCACTGATCTATCAAGGCACATTGAGATATTCTAGCGGGTCTTCTGGGGATTTCGTTTAGTATGCCAATTAGAATTGATGATTGGCACTTGGAGGGTTTGAATGCTTGGAATCTGAAAGGTAAAGCTTTGGTGATAGGCAGTTGCGTCTTTAGGGCTCTTTTGTGGCTTTTGTCGAAGGAAAGAAATGCGTGTTCGTTTGAATATAAGTCCTTACATTTTGATTCTTTTTGTAACTTTATATACAAAACACGGGCTCTTGGTGAATTGCTTTACACAAAAAGTTGTTTTGTAATTATAGTATGTTGGTGATTATCAACGATCGGCAGGCTCTTTTAAAGTAGTTGGTGAGGGGAGGGGTTCTCTCAACCCCAGCCCTTAGTGTGTTCTTTCTTTTTCAATGAGTATATCCCCTTTGAGGTTTCTTATCCCAAAAATAATAATAAAAAAGAAACATTATTATTGTTATTGTTATGAAAAAATTTCTAGATGCTCTCGGTTATTTACTCATTAGTCCAAAACTTACTCGAAAGTACTGAAAAGTTGCACTCTTAAAAATTGGATTTGTTGTTCCTTTAATAGGCTTGAAAATTAAGAACAAGAGAATCAAGAAACTTGTAGGGTCGTGTTCAAGATATCAGCAAGCTATCGAGGGAGTCAGATGTCTGGAGCAAAAGAAAAACCGGGCATGTATATTGAGACATTTCGAAAGCACCCCTTTATCTTGAGCATTAGCATGGTTCAACCCAAATGAAGACAAGGATGTATTAAATTGGATCGTCTTTCCCTTGAGCCTAAATCGATCTGCCCTTTCATGGCTAAATTGGCTGAATGAGTTATCTTAATCCATAAGAGGTTTCACTCAGCTATACTGGGCTTACACCTAAAAATTTGCAAGTATGACCAAGGAGACATTCAACATGTTTAATTTCCTCCAAGAAGAAAATGGAAGCTTGAGAATGAAACGCTAAAACAAAGCAATTCATGTAACAGACCAAGCCCATTGCGAGTAGATATTGTCCTGTTTGGGCTTTCTCCTCAAGATTTTAAAACGCGTCTACTAGAGAGAGGTTTCCACACTTATAAGGAATGTTTTGTTTCCCTTTCCAACTGATGTGGGATCTCACAATCCACCCCCTTAGGGGTAAGCGTCTTTGCTGGCACATTGCCCGGTGTCTAGCTTTGATACCATTTGTAACAATTCAAGTCCACCTCTAGCAGAAATTGTTCTCTTTGGGCTTTCCCTTCTGAGTTTCCCCTCAAGATTTTAAAACGCGTCCACTAGAGAGAGGTTTCTACACCTTATAAGGAAATACTTTGTTCTCCTCTCCAACCGATGTGTGATCTCACAATTCATGAGGTGGTCAACGACCATGTAATAACTGCTAACTTGTGTCTTAAAGTGCAGCTTTTTTCCAAGTATGGTTCTCTTCCACTCCTTGCTTAGTTCCCTACCAACACGGAGAAACTATATGTTTCTGGCCTTGGAGCAAGAAAATCAAGCCTTTATTAGATCAGCCTGAAAGCGTGGGACAAAACAGCAGCCTAGTAAAGGCAGTGGTTTAGACAAACCATATAGAAAATGAAATATAGGAGCCACCAAAAATGACAAACACCATCTGATGCACTCACCTCAGCTTTTTATATGCTAACCTTCATTGTCTAGCAAAAGGTTAAAGAGTACCTTAGTCGGCCAATATCGTGAGATGCGAACCATTCTTGCAAAACAGGGTCCTACTACAAATATCATAGAGGCATGGATATAAAACAAACGATTGCCGTGTTTTGAAGCGAGAAGGGTTTGGGGCATCAATGTTACGTGTTATGCTAAATGACTCATGAACACTTCGATGTGCTATGGAGCTGTCAGTTTGCTATGAAAATTTAGAATAAATTCTTGGCTCGTTACACGTTAGCTTGGTCGGCTCCTAGTAGAGGCTTAGATTATGGTTCACTTCAACGTCTCCCTTTGTGTGTTCACCACATATTATTTTGTTTAATTTGCATTTGTCTTTTATCCGTAACAATAGCTCGAGCTTTTTTTAAAATTGTTTCGTTTTGATTTGTGGACTCCCATGTTTGGTAATATGTTCAAGTAGTTTAGAAATGATAATTGTTTGAAAATATGAAGGTACCCTATGTTCCAGAAGGTCTTGAAGCAATCATTTTCACCGCTGATGGTGATATGAGGCAAGCGCTGAATAATTTGCAAGCAACATATAGTGGATTCCGCTTTGTAAACCAGGACAATGTTTTCAAGGTTCCTATCACATGTTTTTATCTTTCCTTATCTTAGACTCAGAAAACTTCATCTTATGACATGCTTGTTGATTCACTAGGTTTGCGATCAACCGCATCCGCTGCATGTTAAGAACATGGTGCGTAACGTGCTTGAAGGTAAATTTGACGATGCTTGTGCAGCTCTGAAGCAACTCCACGACATGGGCTATTCTCCCACTGACATAATAACCACTCTTTTCCGTATTATTAAGAACTATGATATGGCTGAGTATCTGAAACTGGAATTCATGAAGGTATGCTAAAACCTGAGCTATCGTTTGACCATACCAGATTAGCTAGTACTCACTCTTTTGATGAATTGCAGGAAACTGGGTTTGCTCATATGAGAATTTGTGATGGAGTTGGGTCTTATCTGCAGCTATGCGGTCTTTTGGCCAAGCTTTCCATTGTTCGTGAGACTGCGAAAGCGCCATGA

mRNA sequence

GAGGGCGCGAAGTGGGAAGGGCCGAGTTTCTCCTTCAAATTGTTCTACCCATCCTCGAACAGCCACATTCATCTGTGCAAGGACAAAGAAAATCCATGGCGTCTTCTTCAGGAAGCAGCAGCAGCAGCTACGACATGCCATGGGTGGAGAAGTACAGGCCCAGCAAGGTCGCTGACATTGTAGGCAACGAAGAAGCAGTTTCTCGGCTCCAAGTCATTGCTCGCGACGGCAACATGCCCAATTTCATATTATCTGGTCCGCCTGGAACTGGGAAGACAACCAGTATTCTGGCTCTTGCTCACGAGCTTTTGGGACCAAATTACAAGGATGGTGTTCTGGAGCTTAATGCATCAGATGAAAGGGGAATCGACGTTGTGAGGAACAAAATCAAGATGTTTGCTCAAAAGAAAGTAACCTTGCCTCCTGGTCGACACAAAGTGGTAATATTGGACGAAGCTGACAGCATGACAACTGGAGCACAACAAGCTTTGAGGCGTACAATGGAAATATATTCGAACACAACACGTTTTGCACTTGCATGTAATACCTCCTCAAAAATTATCGAGCCTATTCAGAGTAGATGTGCAATTGTCCGATTTTCAAGATTAACAGATCAAGAGATTCTTGGGCGCCTTATGGTGGTACTTCAAGCAGAAAAGGTACCCTATGTTCCAGAAGGTCTTGAAGCAATCATTTTCACCGCTGATGGTGATATGAGGCAAGCGCTGAATAATTTGCAAGCAACATATAGTGGATTCCGCTTTGTAAACCAGGACAATGTTTTCAAGGTTTGCGATCAACCGCATCCGCTGCATGTTAAGAACATGGTGCGTAACGTGCTTGAAGGTAAATTTGACGATGCTTGTGCAGCTCTGAAGCAACTCCACGACATGGGCTATTCTCCCACTGACATAATAACCACTCTTTTCCGTATTATTAAGAACTATGATATGGCTGAGTATCTGAAACTGGAATTCATGAAGGAAACTGGGTTTGCTCATATGAGAATTTGTGATGGAGTTGGGTCTTATCTGCAGCTATGCGGTCTTTTGGCCAAGCTTTCCATTGTTCGTGAGACTGCGAAAGCGCCATGA

Coding sequence (CDS)

ATGGCGTCTTCTTCAGGAAGCAGCAGCAGCAGCTACGACATGCCATGGGTGGAGAAGTACAGGCCCAGCAAGGTCGCTGACATTGTAGGCAACGAAGAAGCAGTTTCTCGGCTCCAAGTCATTGCTCGCGACGGCAACATGCCCAATTTCATATTATCTGGTCCGCCTGGAACTGGGAAGACAACCAGTATTCTGGCTCTTGCTCACGAGCTTTTGGGACCAAATTACAAGGATGGTGTTCTGGAGCTTAATGCATCAGATGAAAGGGGAATCGACGTTGTGAGGAACAAAATCAAGATGTTTGCTCAAAAGAAAGTAACCTTGCCTCCTGGTCGACACAAAGTGGTAATATTGGACGAAGCTGACAGCATGACAACTGGAGCACAACAAGCTTTGAGGCGTACAATGGAAATATATTCGAACACAACACGTTTTGCACTTGCATGTAATACCTCCTCAAAAATTATCGAGCCTATTCAGAGTAGATGTGCAATTGTCCGATTTTCAAGATTAACAGATCAAGAGATTCTTGGGCGCCTTATGGTGGTACTTCAAGCAGAAAAGGTACCCTATGTTCCAGAAGGTCTTGAAGCAATCATTTTCACCGCTGATGGTGATATGAGGCAAGCGCTGAATAATTTGCAAGCAACATATAGTGGATTCCGCTTTGTAAACCAGGACAATGTTTTCAAGGTTTGCGATCAACCGCATCCGCTGCATGTTAAGAACATGGTGCGTAACGTGCTTGAAGGTAAATTTGACGATGCTTGTGCAGCTCTGAAGCAACTCCACGACATGGGCTATTCTCCCACTGACATAATAACCACTCTTTTCCGTATTATTAAGAACTATGATATGGCTGAGTATCTGAAACTGGAATTCATGAAGGAAACTGGGTTTGCTCATATGAGAATTTGTGATGGAGTTGGGTCTTATCTGCAGCTATGCGGTCTTTTGGCCAAGCTTTCCATTGTTCGTGAGACTGCGAAAGCGCCATGA

Homology

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BLAST of CmoCh16G010590 vs. Swiss-Prot
Match: RFC2_ARATH (Replication factor C subunit 2 OS=Arabidopsis thaliana GN=RFC2 PE=1 SV=1)

HSP 1 Score: 598.2 bits (1541), Expect = 5.5e-170
Identity = 296/331 (89.43%), Postives = 316/331 (95.47%), Query Frame = 1


Query: 2   ASSSGSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGKT 61
           +SSS S+   Y+ PWVEKYRPSKV DIVGNE+AVSRLQVIARDGNMPN ILSGPPGTGKT
Sbjct: 3   SSSSTSTGDGYNEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 62

Query: 62  TSILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 121
           TSILALAHELLG NYK+ VLELNASD+RGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA
Sbjct: 63  TSILALAHELLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 122

Query: 122 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 181
           DSMT+GAQQALRRT+EIYSN+TRFALACNTS+KIIEPIQSRCA+VRFSRL+DQ+ILGRL+
Sbjct: 123 DSMTSGAQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGRLL 182

Query: 182 VVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHV 241
           VV+ AEKVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGF FVNQ+NVFKVCDQPHPLHV
Sbjct: 183 VVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFSFVNQENVFKVCDQPHPLHV 242

Query: 242 KNMVRNVLEGKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 301
           KN+VRNVLE KFD AC  LKQL+D+GYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
Sbjct: 243 KNIVRNVLESKFDIACDGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 302

Query: 302 HMRICDGVGSYLQLCGLLAKLSIVRETAKAP 333
           HMRICDGVGSYLQLCGLLAKLSIVRETAKAP
Sbjct: 303 HMRICDGVGSYLQLCGLLAKLSIVRETAKAP 333

[Close]

BLAST of CmoCh16G010590 vs. Swiss-Prot
Match: RFC4_ORYSJ (Replication factor C subunit 4 OS=Oryza sativa subsp. japonica GN=RFC4 PE=2 SV=2)

HSP 1 Score: 581.3 bits (1497), Expect = 6.9e-165
Identity = 282/330 (85.45%), Postives = 315/330 (95.45%), Query Frame = 1


Query: 2   ASSSGSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGKT 61
           +SS+   + +YD+PWVEKYRP++VAD+ GN +AV+RLQ IARDGNMPN ILSGPPGTGKT
Sbjct: 5   SSSAPDLADAYDIPWVEKYRPTRVADVGGNSDAVARLQDIARDGNMPNLILSGPPGTGKT 64

Query: 62  TSILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 121
           TSIL+LAHELLGP+Y++ VLELNASD+RG+DVVRNKIKMFAQKKVTL PGRHK+VILDEA
Sbjct: 65  TSILSLAHELLGPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKIVILDEA 124

Query: 122 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 181
           DSMT+GAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRL+DQEILGRLM
Sbjct: 125 DSMTSGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLM 184

Query: 182 VVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHV 241
           +V+ AEKVPYVPEGLEAIIFTADGDMRQALNNLQAT SGFRFVNQ+NVFKVCDQPHPLHV
Sbjct: 185 IVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATVSGFRFVNQENVFKVCDQPHPLHV 244

Query: 242 KNMVRNVLEGKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 301
           KNMV+NVL+GKFD+AC+ALKQL+D+GYSPTDIITTLFR+IKNYDMAEYLKLE +KETGFA
Sbjct: 245 KNMVKNVLDGKFDEACSALKQLYDLGYSPTDIITTLFRVIKNYDMAEYLKLELLKETGFA 304

Query: 302 HMRICDGVGSYLQLCGLLAKLSIVRETAKA 332
           HMRICDGVGS+LQL GLLAK ++VRETAKA
Sbjct: 305 HMRICDGVGSFLQLSGLLAKFALVRETAKA 334

[Close]

BLAST of CmoCh16G010590 vs. Swiss-Prot
Match: RFC2_BOVIN (Replication factor C subunit 2 OS=Bos taurus GN=RFC2 PE=2 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 8.3e-126
Identity = 217/320 (67.81%), Postives = 263/320 (82.19%), Query Frame = 1


Query: 3   SSSGSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGKTT 62
           S +  S+  Y++PWVEKYRP K+ +IVGNE+ VSRL+V AR+GN+PN I++GPPGTGKTT
Sbjct: 23  SKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTT 82

Query: 63  SILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 122
           SIL LA  LLGP  KD VLELNAS++RGIDVVRNKIKMFAQ+KVTLP GRHK++ILDEAD
Sbjct: 83  SILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEAD 142

Query: 123 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 182
           SMT GAQQALRRTMEIYS TTRFALACN S KIIEPIQSRCA++R+++LTD +IL RL+ 
Sbjct: 143 SMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDMQILARLLS 202

Query: 183 VLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHVK 242
           V++ EKV Y  +GLEAIIFTA GDMRQALNNLQ+TYSGF F+N +NVFKVCD+PHPL VK
Sbjct: 203 VIEKEKVQYTDDGLEAIIFTAQGDMRQALNNLQSTYSGFGFINSENVFKVCDEPHPLLVK 262

Query: 243 NMVRNVLEGKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 302
            M+++ +    D+A   L  L  +GYSP DII  +FR+ K + MAEYLKLEF+KE G+ H
Sbjct: 263 EMIQHCVSADIDEAYKILAHLWHLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIGYTH 322

Query: 303 MRICDGVGSYLQLCGLLAKL 323
           M+I +GV S LQ+ GLLA+L
Sbjct: 323 MKIAEGVNSLLQMAGLLARL 342

[Close]

BLAST of CmoCh16G010590 vs. Swiss-Prot
Match: RFC2_RAT (Replication factor C subunit 2 OS=Rattus norvegicus GN=Rfc2 PE=2 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 1.1e-125
Identity = 212/315 (67.30%), Postives = 263/315 (83.49%), Query Frame = 1


Query: 8   SSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGKTTSILAL 67
           ++  Y++PWVEKYRP K+ +IVGNE+ VSRL+V AR+GN+PN I++GPPGTGKTTSIL L
Sbjct: 25  TTGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCL 84

Query: 68  AHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTTG 127
           A  LLGP  KD VLELNAS++RGIDVVRNKIKMFAQ+KVTLP GRHK++ILDEADSMT G
Sbjct: 85  ARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDG 144

Query: 128 AQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVLQAE 187
           AQQALRRTMEIYS TTRFALACN S KIIEPIQSRCA++R+++LTD ++L RLM V++ E
Sbjct: 145 AQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQVLSRLMNVIEKE 204

Query: 188 KVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHVKNMVRN 247
           KVPY  +GLEAIIFTA GDMRQALNNLQ+T+SGF ++N +NVFKVCD+PHPL VK M+++
Sbjct: 205 KVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGYINSENVFKVCDEPHPLLVKEMIQH 264

Query: 248 VLEGKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICD 307
            ++   D+A   L  L  +GYSP D+I  +FR+ K + MAEYLKLEF+KE G+ HM++ +
Sbjct: 265 CVDANIDEAYKILAHLWHLGYSPEDVIGNIFRVCKTFPMAEYLKLEFIKEIGYTHMKVAE 324

Query: 308 GVGSYLQLCGLLAKL 323
           GV S LQ+ GLLA+L
Sbjct: 325 GVNSLLQMAGLLARL 339

[Close]

BLAST of CmoCh16G010590 vs. Swiss-Prot
Match: RFC2_HUMAN (Replication factor C subunit 2 OS=Homo sapiens GN=RFC2 PE=1 SV=3)

HSP 1 Score: 450.7 bits (1158), Expect = 1.4e-125
Identity = 216/320 (67.50%), Postives = 264/320 (82.50%), Query Frame = 1


Query: 3   SSSGSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGKTT 62
           S +  S+  Y++PWVEKYRP K+ +IVGNE+ VSRL+V AR+GN+PN I++GPPGTGKTT
Sbjct: 25  SKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTT 84

Query: 63  SILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 122
           SIL LA  LLGP  KD +LELNAS++RGIDVVRNKIKMFAQ+KVTLP GRHK++ILDEAD
Sbjct: 85  SILCLARALLGPALKDAMLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEAD 144

Query: 123 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 182
           SMT GAQQALRRTMEIYS TTRFALACN S KIIEPIQSRCA++R+++LTD +IL RLM 
Sbjct: 145 SMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLMN 204

Query: 183 VLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHVK 242
           V++ E+VPY  +GLEAIIFTA GDMRQALNNLQ+T+SGF F+N +NVFKVCD+PHPL VK
Sbjct: 205 VIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLVK 264

Query: 243 NMVRNVLEGKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 302
            M+++ +    D+A   L  L  +GYSP DII  +FR+ K + MAEYLKLEF+KE G+ H
Sbjct: 265 EMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIGYTH 324

Query: 303 MRICDGVGSYLQLCGLLAKL 323
           M+I +GV S LQ+ GLLA+L
Sbjct: 325 MKIAEGVNSLLQMAGLLARL 344

[Close]

BLAST of CmoCh16G010590 vs. TrEMBL
Match: A0A0A0L763_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G038730 PE=4 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 6.5e-178
Identity = 314/332 (94.58%), Postives = 327/332 (98.49%), Query Frame = 1


Query: 1   MASSSGSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGK 60
           MASSSGSSS+ YD+PWVEKYRP+KV DIVGNE+AVSRLQVIARDGNMPN ILSGPPGTGK
Sbjct: 1   MASSSGSSSN-YDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 60

Query: 61  TTSILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120
           TTSILALAHELLGPNYK+GVLELNASD+RGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
Sbjct: 61  TTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120

Query: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180
           ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL
Sbjct: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180

Query: 181 MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLH 240
           MVV+QAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQDNVFKVCDQPHPLH
Sbjct: 181 MVVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLH 240

Query: 241 VKNMVRNVLEGKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300
           VKN+VRNVLEGKFDDAC  L+QL+D+GYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF
Sbjct: 241 VKNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300

Query: 301 AHMRICDGVGSYLQLCGLLAKLSIVRETAKAP 333
           AHMRICDGVGSYLQLCGLLAKLS+VRETAKAP
Sbjct: 301 AHMRICDGVGSYLQLCGLLAKLSMVRETAKAP 331

[Close]

BLAST of CmoCh16G010590 vs. TrEMBL
Match: M5W470_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008426mg PE=4 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 2.2e-173
Identity = 304/331 (91.84%), Postives = 322/331 (97.28%), Query Frame = 1


Query: 1   MASSSGSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGK 60
           MASSS SSSS+YD+PWVEKYRPS VADIVGNE+AVSRLQVIARDGNMPN IL+GPPGTGK
Sbjct: 1   MASSSSSSSSAYDIPWVEKYRPSNVADIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGK 60

Query: 61  TTSILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120
           TTSILALAHELLGPNYK+ VLELNASD+RGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
Sbjct: 61  TTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120

Query: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180
           ADSMT+GAQQALRRTMEIYSN+TRFALACN SSKIIEPIQSRCA+VRFSRL+DQEILGRL
Sbjct: 121 ADSMTSGAQQALRRTMEIYSNSTRFALACNVSSKIIEPIQSRCALVRFSRLSDQEILGRL 180

Query: 181 MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLH 240
           M+V+QAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT SGFRFVNQ+NVFKVCDQPHPLH
Sbjct: 181 MIVVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLH 240

Query: 241 VKNMVRNVLEGKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300
           VKNMV NVLEGKFDDAC+ LKQL+D+GYSPTDIITT FRIIKNYDMAEYLKLEFMKETGF
Sbjct: 241 VKNMVCNVLEGKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLEFMKETGF 300

Query: 301 AHMRICDGVGSYLQLCGLLAKLSIVRETAKA 332
           AHMRICDGVGSYLQLCGLLAKLS++RETAKA
Sbjct: 301 AHMRICDGVGSYLQLCGLLAKLSLIRETAKA 331

[Close]

BLAST of CmoCh16G010590 vs. TrEMBL
Match: A0A151SLB0_CAJCA (Replication factor C subunit 2 OS=Cajanus cajan GN=KK1_001819 PE=4 SV=1)

HSP 1 Score: 615.5 bits (1586), Expect = 3.7e-173
Identity = 303/329 (92.10%), Postives = 323/329 (98.18%), Query Frame = 1


Query: 3   SSSGSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGKTT 62
           SSS SSSS+YD+PWVEKYRP++VADIVGNE+AVSRLQVIARDGNMPN ILSGPPGTGKTT
Sbjct: 2   SSSSSSSSAYDVPWVEKYRPNRVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 61

Query: 63  SILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 122
           SILALAHELLGPNYK+ VLELNASD+RGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD
Sbjct: 62  SILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 121

Query: 123 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 182
           SMT+GAQQALRRTMEI+SNTTRFALACNTS+KIIEPIQSRCAIVRFSRL+DQEILGRLMV
Sbjct: 122 SMTSGAQQALRRTMEIFSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMV 181

Query: 183 VLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHVK 242
           V+QAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGF+FVNQ NVFKVCDQPHPLHVK
Sbjct: 182 VVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFQFVNQANVFKVCDQPHPLHVK 241

Query: 243 NMVRNVLEGKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 302
           NMVRNV+EG FD+AC+ LKQL+D+GYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH
Sbjct: 242 NMVRNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 301

Query: 303 MRICDGVGSYLQLCGLLAKLSIVRETAKA 332
           MRICDGVGSYLQLCGLLAKLS+VRETAKA
Sbjct: 302 MRICDGVGSYLQLCGLLAKLSVVRETAKA 330

[Close]

BLAST of CmoCh16G010590 vs. TrEMBL
Match: A0A067JNM6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20643 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 1.1e-172
Identity = 299/330 (90.61%), Postives = 324/330 (98.18%), Query Frame = 1


Query: 2   ASSSGSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGKT 61
           +SS+GSS+S YD+PWVEKYRP+K+ADIVGNE+ VSRLQVIARDGNMPN ILSGPPGTGKT
Sbjct: 5   SSSAGSSTSGYDIPWVEKYRPNKIADIVGNEDTVSRLQVIARDGNMPNLILSGPPGTGKT 64

Query: 62  TSILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 121
           TSILALAHELLGPNY++ VLELNASD+RGIDVVRNKIKMFAQKKVTLPPGRHK+VILDEA
Sbjct: 65  TSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKLVILDEA 124

Query: 122 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 181
           DSMT+GAQQALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCA+VRFSRL+DQEILGRLM
Sbjct: 125 DSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLM 184

Query: 182 VVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHV 241
           VV++AEKVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQ+NVFKVCDQPHPLHV
Sbjct: 185 VVVEAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQENVFKVCDQPHPLHV 244

Query: 242 KNMVRNVLEGKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 301
           KNMVR V+EGKFDDAC+ LKQL+D+GYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
Sbjct: 245 KNMVRQVIEGKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 304

Query: 302 HMRICDGVGSYLQLCGLLAKLSIVRETAKA 332
           HMRICDGVGSYLQLCGLLAKL++VRETAKA
Sbjct: 305 HMRICDGVGSYLQLCGLLAKLALVRETAKA 334

[Close]

BLAST of CmoCh16G010590 vs. TrEMBL
Match: A0A059CH82_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01911 PE=4 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 1.8e-172
Identity = 299/330 (90.61%), Postives = 322/330 (97.58%), Query Frame = 1


Query: 2   ASSSGSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGKT 61
           +SSSG+ +  +DMPWVEKYRPSKVADIVGNE+AVSRLQVIARDGNMPN ILSGPPGTGKT
Sbjct: 5   SSSSGAGAGHFDMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 64

Query: 62  TSILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 121
           TSILALAHELLGPNYK+ VLELNASD+RGID VRNKIKMFAQKKVTLPPGRHK+VILDEA
Sbjct: 65  TSILALAHELLGPNYKEAVLELNASDDRGIDTVRNKIKMFAQKKVTLPPGRHKIVILDEA 124

Query: 122 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 181
           DSMT+GAQQALRRTMEIYSNTTRFALACNTS+KIIEPIQSRCA+VRFSRL+DQEILGRL+
Sbjct: 125 DSMTSGAQQALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCALVRFSRLSDQEILGRLL 184

Query: 182 VVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHV 241
           VV++AEKV YVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQ+NVFKVCDQPHPLHV
Sbjct: 185 VVIEAEKVAYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHV 244

Query: 242 KNMVRNVLEGKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 301
           KN+VRNVL+GKFDDACA LKQL+D+GYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
Sbjct: 245 KNIVRNVLDGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 304

Query: 302 HMRICDGVGSYLQLCGLLAKLSIVRETAKA 332
           HMRICDGVGSYLQLCGLLAKL++VR+TAKA
Sbjct: 305 HMRICDGVGSYLQLCGLLAKLAVVRQTAKA 334

[Close]

BLAST of CmoCh16G010590 vs. TAIR10
Match: AT1G63160.1 (AT1G63160.1 replication factor C 2)

HSP 1 Score: 598.2 bits (1541), Expect = 3.1e-171
Identity = 296/331 (89.43%), Postives = 316/331 (95.47%), Query Frame = 1


Query: 2   ASSSGSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGKT 61
           +SSS S+   Y+ PWVEKYRPSKV DIVGNE+AVSRLQVIARDGNMPN ILSGPPGTGKT
Sbjct: 3   SSSSTSTGDGYNEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 62

Query: 62  TSILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 121
           TSILALAHELLG NYK+ VLELNASD+RGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA
Sbjct: 63  TSILALAHELLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 122

Query: 122 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 181
           DSMT+GAQQALRRT+EIYSN+TRFALACNTS+KIIEPIQSRCA+VRFSRL+DQ+ILGRL+
Sbjct: 123 DSMTSGAQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGRLL 182

Query: 182 VVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHV 241
           VV+ AEKVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGF FVNQ+NVFKVCDQPHPLHV
Sbjct: 183 VVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFSFVNQENVFKVCDQPHPLHV 242

Query: 242 KNMVRNVLEGKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 301
           KN+VRNVLE KFD AC  LKQL+D+GYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
Sbjct: 243 KNIVRNVLESKFDIACDGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 302

Query: 302 HMRICDGVGSYLQLCGLLAKLSIVRETAKAP 333
           HMRICDGVGSYLQLCGLLAKLSIVRETAKAP
Sbjct: 303 HMRICDGVGSYLQLCGLLAKLSIVRETAKAP 333

[Close]

BLAST of CmoCh16G010590 vs. TAIR10
Match: AT1G77470.1 (AT1G77470.1 replication factor C subunit 3)

HSP 1 Score: 201.8 bits (512), Expect = 6.5e-52
Identity = 115/331 (34.74%), Postives = 187/331 (56.50%), Query Frame = 1


Query: 6   GSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGKTTSIL 65
           G    S   PWVEKYRP  + D+  + + +  +  +  +  +P+ +L GPPGTGKT++IL
Sbjct: 31  GPPPQSKATPWVEKYRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTIL 90

Query: 66  ALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQ-KKVTLPPGRHKVVILDEADSM 125
           A+A +L GP Y++ +LELNASD+RGIDVVR +I+ FA  +  +L     K+V+LDEAD+M
Sbjct: 91  AVARKLYGPKYRNMILELNASDDRGIDVVRQQIQDFASTQSFSLGKSSVKLVLLDEADAM 150

Query: 126 TTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVL 185
           T  AQ ALRR +E Y+ +TRFAL  N  +KII  +QSRC   RF+ L    +  RL  V+
Sbjct: 151 TKDAQFALRRVIEKYTKSTRFALIGNHVNKIIPALQSRCTRFRFAPLDGVHMSQRLKHVI 210

Query: 186 QAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSG--------FRFVNQDNVFKVCDQP 245
           +AE++     GL A++  ++GDMR+ALN LQ+T+           + + +++V+     P
Sbjct: 211 EAERLVVSDCGLAALVRLSNGDMRKALNILQSTHMASKEITEEESKQITEEDVYLCTGNP 270

Query: 246 HPLHVKNMVRNVLEGKFDDACAALKQLHD-MGYSPTDIITTLFRIIKNYDMAEYLKLEFM 305
            P  ++ +   +L   FD+    + ++    G +  DI+  +   I    M   ++++ +
Sbjct: 271 LPKDIEQISHWLLNKPFDECYKDVSEIKTRKGLAIVDIVKEITLFIFKIKMPSAVRVQLI 330

Query: 306 KETGFAHMRICDGVGSYLQLCGLLAKLSIVR 327
            +      R+  G    LQL  +++  +  R
Sbjct: 331 NDLADIEYRLSFGCNDKLQLGAIISTFTHAR 361

[Close]

BLAST of CmoCh16G010590 vs. TAIR10
Match: AT1G21690.3 (AT1G21690.3 ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 199.1 bits (505), Expect = 4.2e-51
Identity = 118/280 (42.14%), Postives = 155/280 (55.36%), Query Frame = 1


Query: 15  PWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGKTTSILALAHELLGP 74
           PWVEKYRP +V D+   EE V  L    +  + P+ +  GPPGTGKTT+ LA+AH+L GP
Sbjct: 10  PWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGP 69

Query: 75  N-YKDGVLELNASDERGIDVVRNKIKMFA-------QKKVTLPPGRHKVVILDEADSMTT 134
             YK  VLELNASD+RGI+VVR KIK FA        ++   P    K++ILDEADSMT 
Sbjct: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTE 129

Query: 135 GAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVLQA 194
            AQ ALRRTME YS  TRF   CN  S+IIEP+ SRCA  RF  L+++ +  R++ +   
Sbjct: 130 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNE 189

Query: 195 EKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHVKNMVR 254
           E +    E L  +   + GD+R+A+  LQ+    F                PL V N + 
Sbjct: 190 EGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVVPLEVVNKLF 249

Query: 255 NVLE-GKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYD 286
              + G FD A   +  +   GY  + II  LF I+   D
Sbjct: 250 TACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEAD 289

[Close]

BLAST of CmoCh16G010590 vs. TAIR10
Match: AT5G27740.1 (AT5G27740.1 ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-13
Identity = 51/140 (36.43%), Postives = 84/140 (60.00%), Query Frame = 1


Query: 81  LELNASDERGID--VVRNKIKMFAQKKVTLPPGR--HKVVILDEADSMTTGAQQALRRTM 140
           +EL  SD    D  +V+  IK  A+ +     G+  +KV++L+E D ++  AQ +LRRTM
Sbjct: 95  VELTPSDAGFQDRYIVQEIIKEMAKNRPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTM 154

Query: 141 EIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVLQAEKVPYVPEGL 200
           E YS++ R  L CN+SSK+ E I+SRC  VR +  + +EI+  L  V + E +  +P+G 
Sbjct: 155 EKYSSSCRLILCCNSSSKVTEAIKSRCLNVRINAPSQEEIVKVLEFVAKKESL-QLPQGF 214

Query: 201 EA-IIFTADGDMRQALNNLQ 216
            A I   ++  +R+A+ +L+
Sbjct: 215 AARIAEKSNRSLRRAILSLE 233

[Close]

BLAST of CmoCh16G010590 vs. TAIR10
Match: AT5G22010.1 (AT5G22010.1 replication factor C1)

HSP 1 Score: 73.2 bits (178), Expect = 3.5e-13
Identity = 66/253 (26.09%), Postives = 112/253 (44.27%), Query Frame = 1


Query: 14  MPWVEKYRPSKVADIVGNEEAVSRL--------------------QVIARDGNMPNFILS 73
           +PW EKYRP    +IVGN+  V++L                    + +   G+    +LS
Sbjct: 340 LPWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGKKLNDAGSKKAVLLS 399

Query: 74  GPPGTGKTTSILALAHELLGPNYKDGVLELNASDERG---IDVVR-------NKIKMFAQ 133
           G PG GKTTS   L  ++LG       +E+NASD RG    ++ +       N +K    
Sbjct: 400 GTPGIGKTTS-AKLVSQMLGFQ----AVEVNASDSRGKANSNIAKGIGGSNANSVKELVN 459

Query: 134 KK---VTLPPGRH--KVVILDEADSMTTGAQQALRRTM-EIYSNTTRFALACNTS-SKII 193
            +         +H   V+I+DE D M+ G +  +   +  I  +       CN   S+ +
Sbjct: 460 NEAMAANFDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKL 519

Query: 194 EPIQSRCAIVRFSRLTDQEILGRLMVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQA 230
           + + + C  + + + T Q++  RLM + +AE +      LE +    +GD+R A+N LQ 
Sbjct: 520 KSLVNYCLPLNYRKPTKQQMAKRLMHIAKAEGLEINEIALEELAERVNGDIRLAVNQLQY 579

[Close]

BLAST of CmoCh16G010590 vs. NCBI nr
Match: gi|659096165|ref|XP_008448956.1| (PREDICTED: replication factor C subunit 2 isoform X1 [Cucumis melo])

HSP 1 Score: 636.0 bits (1639), Expect = 3.8e-179
Identity = 317/332 (95.48%), Postives = 328/332 (98.80%), Query Frame = 1


Query: 1   MASSSGSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGK 60
           MASSSGSSS+ YD+PWVEKYRP+KV DIVGNE+AVSRLQVIARDGNMPN ILSGPPGTGK
Sbjct: 1   MASSSGSSSN-YDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 60

Query: 61  TTSILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120
           TTSILALAHELLGPNYK+GVLELNASD+RGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
Sbjct: 61  TTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120

Query: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180
           ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL
Sbjct: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180

Query: 181 MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLH 240
           MVV+QAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLH
Sbjct: 181 MVVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLH 240

Query: 241 VKNMVRNVLEGKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300
           VKN+VRNVLEGKFDDACA LKQL+D+GYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF
Sbjct: 241 VKNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300

Query: 301 AHMRICDGVGSYLQLCGLLAKLSIVRETAKAP 333
           AHMRICDGVGSYLQLCGLLAKLS+VRETAKAP
Sbjct: 301 AHMRICDGVGSYLQLCGLLAKLSMVRETAKAP 331

[Close]

BLAST of CmoCh16G010590 vs. NCBI nr
Match: gi|449460473|ref|XP_004147970.1| (PREDICTED: replication factor C subunit 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 631.3 bits (1627), Expect = 9.3e-178
Identity = 314/332 (94.58%), Postives = 327/332 (98.49%), Query Frame = 1


Query: 1   MASSSGSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGK 60
           MASSSGSSS+ YD+PWVEKYRP+KV DIVGNE+AVSRLQVIARDGNMPN ILSGPPGTGK
Sbjct: 1   MASSSGSSSN-YDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 60

Query: 61  TTSILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120
           TTSILALAHELLGPNYK+GVLELNASD+RGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
Sbjct: 61  TTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120

Query: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180
           ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL
Sbjct: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180

Query: 181 MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLH 240
           MVV+QAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQDNVFKVCDQPHPLH
Sbjct: 181 MVVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLH 240

Query: 241 VKNMVRNVLEGKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300
           VKN+VRNVLEGKFDDAC  L+QL+D+GYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF
Sbjct: 241 VKNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300

Query: 301 AHMRICDGVGSYLQLCGLLAKLSIVRETAKAP 333
           AHMRICDGVGSYLQLCGLLAKLS+VRETAKAP
Sbjct: 301 AHMRICDGVGSYLQLCGLLAKLSMVRETAKAP 331

[Close]

BLAST of CmoCh16G010590 vs. NCBI nr
Match: gi|595793275|ref|XP_007200386.1| (hypothetical protein PRUPE_ppa008426mg [Prunus persica])

HSP 1 Score: 616.3 bits (1588), Expect = 3.1e-173
Identity = 304/331 (91.84%), Postives = 322/331 (97.28%), Query Frame = 1


Query: 1   MASSSGSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGK 60
           MASSS SSSS+YD+PWVEKYRPS VADIVGNE+AVSRLQVIARDGNMPN IL+GPPGTGK
Sbjct: 1   MASSSSSSSSAYDIPWVEKYRPSNVADIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGK 60

Query: 61  TTSILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120
           TTSILALAHELLGPNYK+ VLELNASD+RGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
Sbjct: 61  TTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120

Query: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180
           ADSMT+GAQQALRRTMEIYSN+TRFALACN SSKIIEPIQSRCA+VRFSRL+DQEILGRL
Sbjct: 121 ADSMTSGAQQALRRTMEIYSNSTRFALACNVSSKIIEPIQSRCALVRFSRLSDQEILGRL 180

Query: 181 MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLH 240
           M+V+QAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT SGFRFVNQ+NVFKVCDQPHPLH
Sbjct: 181 MIVVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLH 240

Query: 241 VKNMVRNVLEGKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300
           VKNMV NVLEGKFDDAC+ LKQL+D+GYSPTDIITT FRIIKNYDMAEYLKLEFMKETGF
Sbjct: 241 VKNMVCNVLEGKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLEFMKETGF 300

Query: 301 AHMRICDGVGSYLQLCGLLAKLSIVRETAKA 332
           AHMRICDGVGSYLQLCGLLAKLS++RETAKA
Sbjct: 301 AHMRICDGVGSYLQLCGLLAKLSLIRETAKA 331

[Close]

BLAST of CmoCh16G010590 vs. NCBI nr
Match: gi|951003244|ref|XP_014507551.1| (PREDICTED: replication factor C subunit 2 [Vigna radiata var. radiata])

HSP 1 Score: 615.9 bits (1587), Expect = 4.1e-173
Identity = 303/328 (92.38%), Postives = 321/328 (97.87%), Query Frame = 1


Query: 4   SSGSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGKTTS 63
           SS SSS +YD+PWVEKYRP+KVADIVGNE+AVSRLQVIARDGNMPN ILSGPPGTGKTTS
Sbjct: 2   SSSSSSHTYDVPWVEKYRPNKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTS 61

Query: 64  ILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADS 123
           ILALAHELLGPN K+GVLELNASD+RGIDVVRNKIKMFAQKKVTLPPGRHK+VILDEADS
Sbjct: 62  ILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADS 121

Query: 124 MTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVV 183
           MTTGAQQALRRTMEIYSN+TRFALACNTS+KIIEPIQSRCAIVRFSRL+DQEILGRLM+V
Sbjct: 122 MTTGAQQALRRTMEIYSNSTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMIV 181

Query: 184 LQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHVKN 243
           +QAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGF+FVNQ NVFKVCDQPHPLHVKN
Sbjct: 182 VQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKN 241

Query: 244 MVRNVLEGKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHM 303
           MVRNV+EG FDDAC+ LKQL+D+GYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHM
Sbjct: 242 MVRNVIEGNFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHM 301

Query: 304 RICDGVGSYLQLCGLLAKLSIVRETAKA 332
           RICDGVGSYLQLCGLLAKLS+VRETAKA
Sbjct: 302 RICDGVGSYLQLCGLLAKLSLVRETAKA 329

[Close]

BLAST of CmoCh16G010590 vs. NCBI nr
Match: gi|1012344408|gb|KYP55600.1| (Replication factor C subunit 2 [Cajanus cajan])

HSP 1 Score: 615.5 bits (1586), Expect = 5.3e-173
Identity = 303/329 (92.10%), Postives = 323/329 (98.18%), Query Frame = 1


Query: 3   SSSGSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGKTT 62
           SSS SSSS+YD+PWVEKYRP++VADIVGNE+AVSRLQVIARDGNMPN ILSGPPGTGKTT
Sbjct: 2   SSSSSSSSAYDVPWVEKYRPNRVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 61

Query: 63  SILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 122
           SILALAHELLGPNYK+ VLELNASD+RGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD
Sbjct: 62  SILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 121

Query: 123 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 182
           SMT+GAQQALRRTMEI+SNTTRFALACNTS+KIIEPIQSRCAIVRFSRL+DQEILGRLMV
Sbjct: 122 SMTSGAQQALRRTMEIFSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMV 181

Query: 183 VLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHVK 242
           V+QAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGF+FVNQ NVFKVCDQPHPLHVK
Sbjct: 182 VVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFQFVNQANVFKVCDQPHPLHVK 241

Query: 243 NMVRNVLEGKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 302
           NMVRNV+EG FD+AC+ LKQL+D+GYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH
Sbjct: 242 NMVRNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 301

Query: 303 MRICDGVGSYLQLCGLLAKLSIVRETAKA 332
           MRICDGVGSYLQLCGLLAKLS+VRETAKA
Sbjct: 302 MRICDGVGSYLQLCGLLAKLSVVRETAKA 330

The following BLAST results are available for this feature:

BLAST of CmoCh16G010590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RFC2_ARATH	5.5e-170	89.43	Replication factor C subunit 2 OS=Arabidopsis thaliana GN=RFC2 PE=1 SV=1	[more]
RFC4_ORYSJ	6.9e-165	85.45	Replication factor C subunit 4 OS=Oryza sativa subsp. japonica GN=RFC4 PE=2 SV=2	[more]
RFC2_BOVIN	8.3e-126	67.81	Replication factor C subunit 2 OS=Bos taurus GN=RFC2 PE=2 SV=1	[more]
RFC2_RAT	1.1e-125	67.30	Replication factor C subunit 2 OS=Rattus norvegicus GN=Rfc2 PE=2 SV=1	[more]
RFC2_HUMAN	1.4e-125	67.50	Replication factor C subunit 2 OS=Homo sapiens GN=RFC2 PE=1 SV=3	[more]

BLAST of CmoCh16G010590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L763_CUCSA	6.5e-178	94.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G038730 PE=4 SV=1	[more]
M5W470_PRUPE	2.2e-173	91.84	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008426mg PE=4 SV=1	[more]
A0A151SLB0_CAJCA	3.7e-173	92.10	Replication factor C subunit 2 OS=Cajanus cajan GN=KK1_001819 PE=4 SV=1	[more]
A0A067JNM6_JATCU	1.1e-172	90.61	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20643 PE=4 SV=1	[more]
A0A059CH82_EUCGR	1.8e-172	90.61	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01911 PE=4 SV=1	[more]

BLAST of CmoCh16G010590 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G63160.1	3.1e-171	89.43	replication factor C 2	[more]
AT1G77470.1	6.5e-52	34.74	replication factor C subunit 3	[more]
AT1G21690.3	4.2e-51	42.14	ATPase family associated with various cellular activities (AAA)	[more]
AT5G27740.1	1.2e-13	36.43	ATPase family associated with various cellular activities (AAA)	[more]
AT5G22010.1	3.5e-13	26.09	replication factor C1	[more]

BLAST of CmoCh16G010590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096165\|ref\|XP_008448956.1\|	3.8e-179	95.48	PREDICTED: replication factor C subunit 2 isoform X1 [Cucumis melo]	[more]
gi\|449460473\|ref\|XP_004147970.1\|	9.3e-178	94.58	PREDICTED: replication factor C subunit 2 isoform X1 [Cucumis sativus]	[more]
gi\|595793275\|ref\|XP_007200386.1\|	3.1e-173	91.84	hypothetical protein PRUPE_ppa008426mg [Prunus persica]	[more]
gi\|951003244\|ref\|XP_014507551.1\|	4.1e-173	92.38	PREDICTED: replication factor C subunit 2 [Vigna radiata var. radiata]	[more]
gi\|1012344408\|gb\|KYP55600.1\|	5.3e-173	92.10	Replication factor C subunit 2 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003593	AAA+_ATPase
IPR003959	ATPase_AAA_core
IPR008921	DNA_pol3_clamp-load_cplx_C
IPR013748	Rep_factorC_C
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006260	DNA replication

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0006260	DNA replication
cellular_component	GO:0042575	DNA polymerase complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G010590.1	CmoCh16G010590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 46..178 score: 1.5
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 51..168 score: 1.3
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal	unknown	SSF48019	post-AAA+ oligomerization domain-like	coord: 235..326 score: 1.4
IPR013748	Replication factor C, C-terminal	PFAM	PF08542	Rep_fac_C	coord: 236..321 score: 4.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 14..171 score: 6.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 12..234 score: 3.0
None	No IPR available	GENE3D	G3DSA:1.10.8.60		coord: 172..236 score: 2.9
None	No IPR available	GENE3D	G3DSA:1.20.272.10		coord: 237..327 score: 1.1
None	No IPR available	PANTHER	PTHR11669	REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT	coord: 1..327 score: 7.3E
None	No IPR available	PANTHER	PTHR11669:SF5	REPLICATION FACTOR C SUBUNIT 2	coord: 1..327 score: 7.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh16G010590	Cucsa.320140	Cucumber (Gy14) v1	cgycmoB0886
CmoCh16G010590	CmaCh16G010200	Cucurbita maxima (Rimu)	cmacmoB323
CmoCh16G010590	Cla001144	Watermelon (97103) v1	cmowmB291
CmoCh16G010590	Csa3G038730	Cucumber (Chinese Long) v2	cmocuB315
CmoCh16G010590	MELO3C014020	Melon (DHL92) v3.5.1	cmomeB283
CmoCh16G010590	ClCG00G000260	Watermelon (Charleston Gray)	cmowcgB268
CmoCh16G010590	ClCG10G003520	Watermelon (Charleston Gray)	cmowcgB277
CmoCh16G010590	CSPI03G03470	Wild cucumber (PI 183967)	cmocpiB324
CmoCh16G010590	Lsi07G013830	Bottle gourd (USVL1VR-Ls)	cmolsiB316
CmoCh16G010590	Cp4.1LG14g08300	Cucurbita pepo (Zucchini)	cmocpeB308
CmoCh16G010590	MELO3C014020.2	Melon (DHL92) v3.6.1	cmomedB330
CmoCh16G010590	CsaV3_3G003530	Cucumber (Chinese Long) v3	cmocucB0378
CmoCh16G010590	Cla97C10G188060	Watermelon (97103) v2	cmowmbB321
CmoCh16G010590	Bhi11G000292	Wax gourd	cmowgoB0414
CmoCh16G010590	CsGy3G003450	Cucumber (Gy14) v2	cgybcmoB311
CmoCh16G010590	Carg25213	Silver-seed gourd	carcmoB0025

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh16G010590	Cucurbita moschata (Rifu)	cmocmoB291
CmoCh16G010590	Cucurbita maxima (Rimu)	cmacmoB804
CmoCh16G010590	Watermelon (Charleston Gray)	cmowcgB280
CmoCh16G010590	Cucurbita pepo (Zucchini)	cmocpeB329
CmoCh16G010590	Silver-seed gourd	carcmoB1170