CmoCh16G006620 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGATTTTGTCGGGATTGAGTGGGAAACCCTCGAAATGTTGTCTTCTGAGACCTAGTCCCAGGATTCCACGTGAGCTGGTTTCATCTTTTCCCAATGGGAACTTTAGAGAAAATATTGATTTGCAATATCTCAAAAGGTTCTGCTCACTACTACACGTTAGTGTTCTGATGTGGTCATTCCAATTCATGATTCATTTACCTTGTTGTTTAATGCAGAAGTTGCTGGACGGGTCCTGCTCTTAGAGGCAAAACTCTCCAGATTCGACACACTACTAAGTGTGCATTTGATGCTTCCGGAGATTTTGCAAATGAGTCTGCCGGTAAAGTTCTTACTCCAACTAACAACATCGATTATCTCCACCAAACTAATCCATCTAGGAAGCTCCTAGTCAAACAAAGCTCTGTGTTATTGTACCTAACTGGCAATTAACAATAGGAACAATTTAGACTGACTTTACAACATTAAAGGGATAATGGTTACATTTTAGAACTTAGGGATCAAAATAGATGTAAAGGGTTATAAATTCATGACCAAAAATTTAATTTGCTGGTTTATTTATTTAATAAACTATTGATCTACTCTCTCTATGGTTCAAAACTTTGATTATTAGGACCTGAAACATGGATTTTTTTTATCTTAAAATGAGTAAATTTTAAAACTGGGATTATAACATATGATTTTCTACACGATATCGTGATAAATTACTAATAAATTTTATAAATCTATTCGTTCTTATATTGATGACGATGATATTTACTGCAATTGTATTAAGCGAGCACCGCACTCCATTTTGACACGTAAGATATTTTCCTTCTTGACACTTTTCTAGAATTAGCTTAGCTCATCTCTGAGCTTCCTTCTTGACTCTTTTTGCTAATGCAGCTATATTCCCTCGAATACATGTAAGGGATCCATACAAACGGCTTGGCATAAGTAAGGAAGCATCTGAAGATGAAATTCAAGCTGCCAGAAACTTCCTTATTCATAGATACGCAGGGCACAAAGAAAGTGTCGATGCCATTGAATCAGCTCATGATAAAATTATTATGCAAAAATTTTATGACAGAAAGAACCCAAAAATTGATATCAAGAAAAAGGTCAGGGAAGTGAATCAGTCTCGGGTTGTGCAGGCTATAAGGAATAGGTTCCAAACACCATCTACAAAGTTCATAATCAAGTCATCCATTGCCTTTTTAGTTCTTGGAGTTCTCACCATTCTTTTTCCAACCGAGGAAGGCCCAACCCTTCAGGTTGCTATATCACTCATAGCTACTTTCTATTTCATACATGATCGACTGAAGAGCAAACTCCGAGCTTTCCTTTATGGGTATGTCTAGAACATTCATCTCATTTCCTTTTCGAAATTTATGATAGAACATAAATACTAACATATAGAACAGAATTTAATGGTATCTGATAAGATAACTGGGTTTGATTCTATGAGTTTTTCAATGGTACAGGGCTGGAGCTTTCATATTCTCATGGCTGTTGGGAACCTTTTTGATGGTATCTGTGATCCCTCCTGTAATAAAAGGTTTGAGAGGCTTTGAAGTCACTACTTCATTGATAACCTATATCTTACTCTGGGTTTCATCTACATATTTAAAGTAGCAAAGCAAATGTTTTCTTCTATTGTGAGATTCAAATTTTGCTGCGGATGAGGTTCTGATTCACAGTGTTCTGCTTCCCTGCCCCTTCGGTTGATTAATGGAGAGGATATGTTGAGATTGAAGGGTTCTTTGTTTTAGAGTTGAAAAGGATGTAAACTATTACAGATGGAAACTGTAGGTTAGTTGTTTGTTATTATCTGTATTTCATCTTTTGTTGCAATGATAATCTTTCTTGTGCAGTTTTTTGAAAGCGCGAAGCGTATTGAGCTGCAATGACCTTTTTTTGGGGGCGTTGAGCCTTGAGATAATAACCAACCAACTTTAATTTTGTAAGTTCGACAATCGAAGGTTGAATTACCCCCGAAAAGGAATCTATTGATTCTCTCCCAATTGGTTGGACCGCACGTGCAATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTTCAGGATGACCCTATGTGGAGGACCGCAGGTGCAATGATTTACTTCACGGGCAAGGTCTCTGGTTCAAGTTCAGGATGGCCCTATGTGGAGAACATTCTTTATAAAGGTGTGGAAACCTTCCACACCTTTAAAAGGGGAAGTCGGAAAGGGAAAGTTCAAAGATAACAATATCTACTAG ATGATGATTTTGTCGGGATTGAGTGGGAAACCCTCGAAATGTTGTCTTCTGAGACCTAGTCCCAGGATTCCACGTGAGCTGGTTTCATCTTTTCCCAATGGGAACTTTAGAGAAAATATTGATTTGCAATATCTCAAAAGAAGTTGCTGGACGGGTCCTGCTCTTAGAGGCAAAACTCTCCAGATTCGACACACTACTAAGTGTGCATTTGATGCTTCCGGAGATTTTGCAAATGAGTCTGCCGCTATATTCCCTCGAATACATGTAAGGGATCCATACAAACGGCTTGGCATAAGTAAGGAAGCATCTGAAGATGAAATTCAAGCTGCCAGAAACTTCCTTATTCATAGATACGCAGGGCACAAAGAAAGTGTCGATGCCATTGAATCAGCTCATGATAAAATTATTATGCAAAAATTTTATGACAGAAAGAACCCAAAAATTGATATCAAGAAAAAGGTCAGGGAAGTGAATCAGTCTCGGGTTGTGCAGGCTATAAGGAATAGGTTCCAAACACCATCTACAAAGTTCATAATCAAGTCATCCATTGCCTTTTTAGTTCTTGGAGTTCTCACCATTCTTTTTCCAACCGAGGAAGGCCCAACCCTTCAGGTTGCTATATCACTCATAGCTACTTTCTATTTCATACATGATCGACTGAAGAGCAAACTCCGAGCTTTCCTTTATGGGGCTGGAGCTTTCATATTCTCATGGCTGTTGGGAACCTTTTTGATGGTATCTGTGATCCCTCCTGTAATAAAAGGTTTGAGAGGCTTTGAAGTCACTACTTCATTGATAACCTATATCTTACTCTGGGTTTCATCTACATATTTAAAGTAGCAAAGCAAATGTTTTCTTCTATTGTGAGATTCAAATTTTGCTGCGGATGAGGTTCTGATTCACAGTGTTCTGCTTCCCTGCCCCTTCGGTTGATTAATGGAGAGGATATGTTGAGATTGAAGGGTTCTTTGTTTTAGAGTTGAAAAGGATGTAAACTATTACAGATGGAAACTGTAGGTTAGTTGTTTGTTATTATCTGTATTTCATCTTTTGTTGCAATGATAATCTTTCTTGTGCAGTTTTTTGAAAGCGCGAAGCGTATTGAGCTGCAATGACCTTTTTTTGGGGGCGTTGAGCCTTGAGATAATAACCAACCAACTTTAATTTTGTAAGTTCGACAATCGAAGGTTGAATTACCCCCGAAAAGGAATCTATTGATTCTCTCCCAATTGGTTGGACCGCACGTGCAATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTTCAGGATGGCCCTATGTGGAGAACATTCTTTATAAAGGTGTGGAAACCTTCCACACCTTTAAAAGGGGAAGTCGGAAAGGGAAAGTTCAAAGATAACAATATCTACTAG ATGATGATTTTGTCGGGATTGAGTGGGAAACCCTCGAAATGTTGTCTTCTGAGACCTAGTCCCAGGATTCCACGTGAGCTGGTTTCATCTTTTCCCAATGGGAACTTTAGAGAAAATATTGATTTGCAATATCTCAAAAGAAGTTGCTGGACGGGTCCTGCTCTTAGAGGCAAAACTCTCCAGATTCGACACACTACTAAGTGTGCATTTGATGCTTCCGGAGATTTTGCAAATGAGTCTGCCGCTATATTCCCTCGAATACATGTAAGGGATCCATACAAACGGCTTGGCATAAGTAAGGAAGCATCTGAAGATGAAATTCAAGCTGCCAGAAACTTCCTTATTCATAGATACGCAGGGCACAAAGAAAGTGTCGATGCCATTGAATCAGCTCATGATAAAATTATTATGCAAAAATTTTATGACAGAAAGAACCCAAAAATTGATATCAAGAAAAAGGTCAGGGAAGTGAATCAGTCTCGGGTTGTGCAGGCTATAAGGAATAGGTTCCAAACACCATCTACAAAGTTCATAATCAAGTCATCCATTGCCTTTTTAGTTCTTGGAGTTCTCACCATTCTTTTTCCAACCGAGGAAGGCCCAACCCTTCAGGTTGCTATATCACTCATAGCTACTTTCTATTTCATACATGATCGACTGAAGAGCAAACTCCGAGCTTTCCTTTATGGGGCTGGAGCTTTCATATTCTCATGGCTGTTGGGAACCTTTTTGATGGTATCTGTGATCCCTCCTGTAATAAAAGGTTTGAGAGGCTTTGAAGTCACTACTTCATTGATAACCTATATCTTACTCTGGGTTTCATCTACATATTTAAAGTAG
BLAST of CmoCh16G006620 vs. Swiss-Prot
Match: CPP1_ARATH (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Arabidopsis thaliana GN=CPP1 PE=1 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 5.3e-33 Identity = 84/217 (38.71%), Postives = 130/217 (59.91%), Query Frame = 1
BLAST of CmoCh16G006620 vs. Swiss-Prot
Match: CPP1_NICBE (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Nicotiana benthamiana GN=CPP1 PE=1 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.0e-31 Identity = 77/198 (38.89%), Postives = 125/198 (63.13%), Query Frame = 1
BLAST of CmoCh16G006620 vs. TrEMBL
Match: A0A0A0KUU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047350 PE=4 SV=1) HSP 1 Score: 523.1 bits (1346), Expect = 2.1e-145 Identity = 268/279 (96.06%), Postives = 273/279 (97.85%), Query Frame = 1
BLAST of CmoCh16G006620 vs. TrEMBL
Match: A0A061DFU1_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_000248 PE=4 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 8.1e-105 Identity = 212/286 (74.13%), Postives = 238/286 (83.22%), Query Frame = 1
BLAST of CmoCh16G006620 vs. TrEMBL
Match: V4UHG9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026225mg PE=4 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 1.2e-103 Identity = 203/283 (71.73%), Postives = 235/283 (83.04%), Query Frame = 1
BLAST of CmoCh16G006620 vs. TrEMBL
Match: A0A067FY95_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023417mg PE=4 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 1.2e-103 Identity = 203/283 (71.73%), Postives = 235/283 (83.04%), Query Frame = 1
BLAST of CmoCh16G006620 vs. TrEMBL
Match: A0A061DFD4_THECC (Uncharacterized protein isoform 3 OS=Theobroma cacao GN=TCM_000248 PE=4 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 7.6e-103 Identity = 211/286 (73.78%), Postives = 237/286 (82.87%), Query Frame = 1
BLAST of CmoCh16G006620 vs. TAIR10
Match: AT3G51140.1 (AT3G51140.1 Protein of unknown function (DUF3353)) HSP 1 Score: 311.2 bits (796), Expect = 6.3e-85 Identity = 155/214 (72.43%), Postives = 184/214 (85.98%), Query Frame = 1
BLAST of CmoCh16G006620 vs. TAIR10
Match: AT5G23040.1 (AT5G23040.1 Protein of unknown function (DUF3353)) HSP 1 Score: 142.9 bits (359), Expect = 3.0e-34 Identity = 84/217 (38.71%), Postives = 130/217 (59.91%), Query Frame = 1
BLAST of CmoCh16G006620 vs. NCBI nr
Match: gi|449457558|ref|XP_004146515.1| (PREDICTED: uncharacterized protein LOC101208655 isoform X1 [Cucumis sativus]) HSP 1 Score: 523.1 bits (1346), Expect = 3.0e-145 Identity = 268/279 (96.06%), Postives = 273/279 (97.85%), Query Frame = 1
BLAST of CmoCh16G006620 vs. NCBI nr
Match: gi|659102308|ref|XP_008452060.1| (PREDICTED: uncharacterized protein LOC103493178 isoform X1 [Cucumis melo]) HSP 1 Score: 521.5 bits (1342), Expect = 8.8e-145 Identity = 266/279 (95.34%), Postives = 274/279 (98.21%), Query Frame = 1
BLAST of CmoCh16G006620 vs. NCBI nr
Match: gi|778690785|ref|XP_011653167.1| (PREDICTED: uncharacterized protein LOC101208655 isoform X2 [Cucumis sativus]) HSP 1 Score: 516.5 bits (1329), Expect = 2.8e-143 Identity = 267/279 (95.70%), Postives = 272/279 (97.49%), Query Frame = 1
BLAST of CmoCh16G006620 vs. NCBI nr
Match: gi|659102310|ref|XP_008452061.1| (PREDICTED: uncharacterized protein LOC103493178 isoform X2 [Cucumis melo]) HSP 1 Score: 515.0 bits (1325), Expect = 8.2e-143 Identity = 265/279 (94.98%), Postives = 273/279 (97.85%), Query Frame = 1
BLAST of CmoCh16G006620 vs. NCBI nr
Match: gi|590702973|ref|XP_007046750.1| (Uncharacterized protein isoform 1 [Theobroma cacao]) HSP 1 Score: 388.3 bits (996), Expect = 1.2e-104 Identity = 212/286 (74.13%), Postives = 238/286 (83.22%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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