CmoCh04G007960 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTCAGAAAGCAGGGTTTAGTGGTTCGGTAGCGCACTTCGAAAGCTCTAGGTCAGCGTCTTCCCTCTCCCTTCAGCTCAGCATGTGCGATCGACCCAACTGAAGCTTTTGCTTATCGGACCGCCGTGCATTTTCGCCCATGAGGTTTTGAGCTTCATTTCATTTCGTGTGTTTTTTGAGGTTGATTTTGGGTGGATGGTGAACCAAGCGAATTTTATCAATTGAGGTTCTGCTGGAATTTACTATTGTTTCGTCATGCATCGCATAATTTTGCTCTTTTGTACTCTAAAAATTAGTTAACCTTCACTGCGGCATTTCCTTTGATTGGTTGAATGGGTTTAGCTCTCTTAACTCCACTCTATAGCTCACATGTTGAACCCTGAAAGTGGAATGAATGTTCTAGAAAAATTTGATTGCGGGTTGAAAGTTTTATCCAAATGGGCTGCGAGGGAGGATGAAAACGAATTTATTCTACTTGTCTCTCTATGCATTTTCTCTTTCTTCTCTTCTCCTCGCATAATTTTGTTGACTGAGAAAGAGGATCAATTACTGACTATTGGAAGAAGAGACTTGGGTTATGGGCTAGTGAGGACGTTGGGCTCTAAGGGGTGAATTGTGAGATCCTACATTGGTTGGTAACGGGAACGGCACATTCCTTCTAAGGAGGTAGAAATCTCTCCCTATTAGATGCGTTTTGAAACTTTGAGGGGAAGCTCAGACACCAAACAGCGTGCCAAGTAAGGACAACTTCATTATATAACATTATATAACATTTCTTCCGCTCAAAGGGGTGGATTATGAGATCCTACATTGGTTGGTAAGGGGAATGGCACATTCCTTCAAGGAGGTGGAAATCTCTCCCTAATAGATGCGTTTTACAACTTTGAGGTGGAAATCTCTCCCTAATAGATGCGTTTTACAACTTTGAGGGGAAGCTCAGACACCAAACGGCGTACCAATAAGGACAACTTCATTATATAACATTTCTAACCACTGCTCAAGGATAGAACACCCTGGAAATTTCAAGAGAAACTTTATATTCTCGTTTATACATGACTAAATAATGGAAGGTAATCTATATAGCATACCAATTCTCTTCATCTTGTTGATTGGTGCAATTTATGGCTGATGCTCGGATTCTTATACAGTGATAATTTCTAATTTATTATGATCAATTTTTTTCAGTTTCTGTTTCTTAATCTTATTTAAAGTGTATCTAATACTGTGGTTTTCAAAACCATTCAGCTGCTGATTCTGTGGCTCGGAGAATACAAACATATTAGTGATACTGTACGATGATGATTTTGTCGGGATTGAGTGGCAAACCCTCAAAATGTTGTCCTCTGAGACCTAGTACTAGGATTCAACGTGAGCTGATTTCATCTTTTCCCAATGGGAACTTTAGAGAAATTATTGATTTGCAGTATCTCAAAAGGTTCTGCTCACTAATACACGCTATTGTTCTGATGTGGTGTTTCCAGTTCACCCTCATTTAACTTGTTTAATGCAGAAATTACTGGACGGGTCCTGCTCTTAGATGCAAAACTCTCCAAATTCGACACACTACTAAGTGTGCATTTGATGCTTCCTCCAGAGATCTTGCAAATGATTCTGCTGGTATTGTTCCTATTCCCTTGTTGAAATGGTATTAGACAACAAAATTATGTGGCTTGAAAGGGAAAATTAGAAGTTTGGGGACCGTTTAGACTAATGGTTACAACCCTCAAGGGTTAAATATTCAGATTTGGAAATTCATGATCAAAATACTCTTAGAAGGTAAAAGTTCATGGCCAAAACTATGATTTTCTCTGCTAGTGCAGCTGAATTCCCTCGAATTCATGTAAGGGATCCATACAAACGGCTCGGCATAAGTAAGGAAGCATCAGAAGATGAAATTCAATCTGCCAGAAACTTCCTTATTAATAGGTACGCAGGGCACAAAGACAGTGTTGATGCCATTGAAGCAGCTCATGATAAAATTATTATGCAAAAATTTTACGACAGAAAGAACCCGAAAATTGACCTCAAGAAAAAGGTGAGGGAAGTCAATCAGTCACGGGTTGTGCAGGCTATAAGGAGCAGGTTTCAAACACCATCTACAAAATTCATAATCACGGCATTAATTGCATTTTTAGTTCTTGGCGTTCTTACCATTCTCTTCCCAACTGAGGAAGGCCCAACCCTCCAGGTTGCTGTATCACTCATAGCGACGTTCTATTTCATACACGATCGACTGAAGAGCAAACTCCGAGCATTCCTTTATGGGTACGTCCAGAATATGCATATCGTTCCCTTTTTTAACTTTATGAATGAACATAATATATCTTTTTTTGTTGATTGATTGGCTACTCTCCTTTCCTACAACCATATAGAACAGAATTCAATGGTTTCTGATAAGATAACTGAGTTTAATTAATGGGAGTTTTTTTTTCAATGGTACAGGGCTGGAGCTTTCATATTCTCATGGCTGTTGGGAACCTTTTTGGTGGTATCTGTGATCCCCCCTGTTATAAAAGGATTGAGAGGCTTTGAAGTAACCACTTCACTAATAACCTATATCTTACTCTGGGTTTCATCTACGTATTTAAAGTAGCAGAGCAAAGATTTTTTCTATTGTGAGGTTCGAATTTTTCTGGGGCCAAAAGCGCGAAGTGTATTAAGCTTCTTTCTTTTTTTTTTAGCCTGAGCCATAAGGTGTGGACTTTAGCGAGGTGAGGCACCATGTCGTATGAAAAATAGTTTTCATTTAGTCTATGGAACTTTTTAAGTTCAATCTCAAATCATAGTTTCGTCTACAGTTCTATTATTTAGTTGACAATATAATTTTTGTACTTTTAAAATTATAATGATCAG TTTTTCAGAAAGCAGGGTTTAGTGGTTCGGTAGCGCACTTCGAAAGCTCTAGGTCAGCGTCTTCCCTCTCCCTTCAGCTCAGCATGTGCGATCGACCCAACTGAAGCTTTTGCTTATCGGACCGCCGTGCATTTTCGCCCATGAGGTTTTGAGCTTCATTTCATTTCGTGTGTTTTTTGAGGTTGATTTTGGGTGGATGGTGAACCAAGCGAATTTTATCAATTGAGGTTCTGCTGGAATTTACTATTGTTTCGTCATGCATCGCATAATTTTGCTCTTTTGTACTCTAAAAATTAGTTAACCTTCACTGCGGCATTTCCTTTGATTGGTTGAATGGGTTTAGCTCTCTTAACTCCACTCTATAGCTCACATGTTGAACCCTGAAAGTGGAATGAATGTTCTAGAAAAATTTGATTGCGGGTTGAAAGTTTTATCCAAATGGGCTGCGAGGGAGGATGAAAACGAATTTATTCTACTTGTCTCTCTATGCATTTTCTCTTTCTTCTCTTCTCCTCGCATAATTTTGTTGACTGAGAAAGAGGATCAATTACTGACTATTGGAAGAAGAGACTTGGGTTATGGGCTAGTGAGGACGTTGGGCTCTAAGGGGTGAATTGTGAGATCCTACATTGGTTGGTAACGGGAACGGCACATTCCTTCTAAGGAGGTAGAAATCTCTCCCTATTAGATGCGTTTTGAAACTTTGAGGGGAAGCTCAGACACCAAACAGCGTGCCAAGTAAGGACAACTTCATTATATAACATTATATAACATTTCTTCCGCTCAAAGGGGTGGATTATGAGATCCTACATTGGTTGGTAAGGGGAATGGCACATTCCTTCAAGGAGGTGGAAATCTCTCCCTAATAGATGCGTTTTACAACTTTGAGGTGGAAATCTCTCCCTAATAGATGCGTTTTACAACTTTGAGGGGAAGCTCAGACACCAAACGGCGTACCAATAAGGACAACTTCATTATATAACATTTCTAACCACTGCTCAAGGATAGAACACCCTGGAAATTTCAAGAGAAACTTTATATTCTCGTTTATACATGACTAAATAATGGAAGCTGCTGATTCTGTGGCTCGGAGAATACAAACATATTAGTGATACTGTACGATGATGATTTTGTCGGGATTGAGTGGCAAACCCTCAAAATGTTGTCCTCTGAGACCTAGTACTAGGATTCAACGTGAGCTGATTTCATCTTTTCCCAATGGGAACTTTAGAGAAATTATTGATTTGCAGTATCTCAAAAGAAATTACTGGACGGGTCCTGCTCTTAGATGCAAAACTCTCCAAATTCGACACACTACTAAGTGTGCATTTGATGCTTCCTCCAGAGATCTTGCAAATGATTCTGCTGGTATTGTTCCTATTCCCTTGTTGAAATGTGCAGCTGAATTCCCTCGAATTCATGTAAGGGATCCATACAAACGGCTCGGCATAAGTAAGGAAGCATCAGAAGATGAAATTCAATCTGCCAGAAACTTCCTTATTAATAGGTACGCAGGGCACAAAGACAGTGTTGATGCCATTGAAGCAGCTCATGATAAAATTATTATGCAAAAATTTTACGACAGAAAGAACCCGAAAATTGACCTCAAGAAAAAGGTGAGGGAAGTCAATCAGTCACGGGTTGTGCAGGCTATAAGGAGCAGGTTTCAAACACCATCTACAAAATTCATAATCACGGCATTAATTGCATTTTTAGTTCTTGGCGTTCTTACCATTCTCTTCCCAACTGAGGAAGGCCCAACCCTCCAGGTTGCTGTATCACTCATAGCGACGTTCTATTTCATACACGATCGACTGAAGAGCAAACTCCGAGCATTCCTTTATGGGGCTGGAGCTTTCATATTCTCATGGCTGTTGGGAACCTTTTTGGTGGTATCTGTGATCCCCCCTGTTATAAAAGGATTGAGAGGCTTTGAAGTAACCACTTCACTAATAACCTATATCTTACTCTGGGTTTCATCTACGTATTTAAAGTAGCAGAGCAAAGATTTTTTCTATTGTGAGGTTCGAATTTTTCTGGGGCCAAAAGCGCGAAGTGTATTAAGCTTCTTTCTTTTTTTTTTAGCCTGAGCCATAAGGTGTGGACTTTAGCGAGGTGAGGCACCATGTCGTATGAAAAATAGTTTTCATTTAGTCTATGGAACTTTTTAAGTTCAATCTCAAATCATAGTTTCGTCTACAGTTCTATTATTTAGTTGACAATATAATTTTTGTACTTTTAAAATTATAATGATCAG ATGATGATTTTGTCGGGATTGAGTGGCAAACCCTCAAAATGTTGTCCTCTGAGACCTAGTACTAGGATTCAACGTGAGCTGATTTCATCTTTTCCCAATGGGAACTTTAGAGAAATTATTGATTTGCAGTATCTCAAAAGAAATTACTGGACGGGTCCTGCTCTTAGATGCAAAACTCTCCAAATTCGACACACTACTAAGTGTGCATTTGATGCTTCCTCCAGAGATCTTGCAAATGATTCTGCTGGTATTGTTCCTATTCCCTTGTTGAAATGTGCAGCTGAATTCCCTCGAATTCATGTAAGGGATCCATACAAACGGCTCGGCATAAGTAAGGAAGCATCAGAAGATGAAATTCAATCTGCCAGAAACTTCCTTATTAATAGGTACGCAGGGCACAAAGACAGTGTTGATGCCATTGAAGCAGCTCATGATAAAATTATTATGCAAAAATTTTACGACAGAAAGAACCCGAAAATTGACCTCAAGAAAAAGGTGAGGGAAGTCAATCAGTCACGGGTTGTGCAGGCTATAAGGAGCAGGTTTCAAACACCATCTACAAAATTCATAATCACGGCATTAATTGCATTTTTAGTTCTTGGCGTTCTTACCATTCTCTTCCCAACTGAGGAAGGCCCAACCCTCCAGGTTGCTGTATCACTCATAGCGACGTTCTATTTCATACACGATCGACTGAAGAGCAAACTCCGAGCATTCCTTTATGGGGCTGGAGCTTTCATATTCTCATGGCTGTTGGGAACCTTTTTGGTGGTATCTGTGATCCCCCCTGTTATAAAAGGATTGAGAGGCTTTGAAGTAACCACTTCACTAATAACCTATATCTTACTCTGGGTTTCATCTACGTATTTAAAGTAG
BLAST of CmoCh04G007960 vs. Swiss-Prot
Match: CPP1_NICBE (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Nicotiana benthamiana GN=CPP1 PE=1 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 8.5e-34 Identity = 83/199 (41.71%), Postives = 126/199 (63.32%), Query Frame = 1
BLAST of CmoCh04G007960 vs. Swiss-Prot
Match: CPP1_ARATH (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Arabidopsis thaliana GN=CPP1 PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 6.1e-32 Identity = 89/229 (38.86%), Postives = 131/229 (57.21%), Query Frame = 1
BLAST of CmoCh04G007960 vs. TrEMBL
Match: A0A0A0KUU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047350 PE=4 SV=1) HSP 1 Score: 489.6 bits (1259), Expect = 2.7e-135 Identity = 251/290 (86.55%), Postives = 266/290 (91.72%), Query Frame = 1
BLAST of CmoCh04G007960 vs. TrEMBL
Match: A0A061DFU1_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_000248 PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 2.8e-100 Identity = 203/295 (68.81%), Postives = 236/295 (80.00%), Query Frame = 1
BLAST of CmoCh04G007960 vs. TrEMBL
Match: V4UHG9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026225mg PE=4 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 2.4e-99 Identity = 197/295 (66.78%), Postives = 235/295 (79.66%), Query Frame = 1
BLAST of CmoCh04G007960 vs. TrEMBL
Match: A0A067FY95_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023417mg PE=4 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 2.4e-99 Identity = 197/295 (66.78%), Postives = 235/295 (79.66%), Query Frame = 1
BLAST of CmoCh04G007960 vs. TrEMBL
Match: A0A061DFD4_THECC (Uncharacterized protein isoform 3 OS=Theobroma cacao GN=TCM_000248 PE=4 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 2.0e-98 Identity = 202/295 (68.47%), Postives = 235/295 (79.66%), Query Frame = 1
BLAST of CmoCh04G007960 vs. TAIR10
Match: AT3G51140.1 (AT3G51140.1 Protein of unknown function (DUF3353)) HSP 1 Score: 295.0 bits (754), Expect = 4.9e-80 Identity = 152/223 (68.16%), Postives = 180/223 (80.72%), Query Frame = 1
BLAST of CmoCh04G007960 vs. TAIR10
Match: AT5G23040.1 (AT5G23040.1 Protein of unknown function (DUF3353)) HSP 1 Score: 139.4 bits (350), Expect = 3.4e-33 Identity = 89/229 (38.86%), Postives = 131/229 (57.21%), Query Frame = 1
BLAST of CmoCh04G007960 vs. NCBI nr
Match: gi|659102308|ref|XP_008452060.1| (PREDICTED: uncharacterized protein LOC103493178 isoform X1 [Cucumis melo]) HSP 1 Score: 492.3 bits (1266), Expect = 5.9e-136 Identity = 252/290 (86.90%), Postives = 267/290 (92.07%), Query Frame = 1
BLAST of CmoCh04G007960 vs. NCBI nr
Match: gi|449457558|ref|XP_004146515.1| (PREDICTED: uncharacterized protein LOC101208655 isoform X1 [Cucumis sativus]) HSP 1 Score: 489.6 bits (1259), Expect = 3.8e-135 Identity = 251/290 (86.55%), Postives = 266/290 (91.72%), Query Frame = 1
BLAST of CmoCh04G007960 vs. NCBI nr
Match: gi|659102310|ref|XP_008452061.1| (PREDICTED: uncharacterized protein LOC103493178 isoform X2 [Cucumis melo]) HSP 1 Score: 485.7 bits (1249), Expect = 5.6e-134 Identity = 251/290 (86.55%), Postives = 266/290 (91.72%), Query Frame = 1
BLAST of CmoCh04G007960 vs. NCBI nr
Match: gi|778690785|ref|XP_011653167.1| (PREDICTED: uncharacterized protein LOC101208655 isoform X2 [Cucumis sativus]) HSP 1 Score: 483.0 bits (1242), Expect = 3.6e-133 Identity = 250/290 (86.21%), Postives = 265/290 (91.38%), Query Frame = 1
BLAST of CmoCh04G007960 vs. NCBI nr
Match: gi|590702973|ref|XP_007046750.1| (Uncharacterized protein isoform 1 [Theobroma cacao]) HSP 1 Score: 373.2 bits (957), Expect = 4.0e-100 Identity = 203/295 (68.81%), Postives = 236/295 (80.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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