CmoCh16G006360 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh16G006360
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionStress responsive alpha-beta barrel domain protein isoform 1
LocationCmo_Chr16 : 3134132 .. 3137938 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTATGATGATCGGTTTTCGTAGTCCACCCATTTTTGTGTCCCATAGCTTCTCATCAATGTCCATGGCGGATCTTGAGGCTCAAACCTCGACTAACCCAAGCAATTTCAGATAGAGAGACCTCCACACTTTAACCATCGCAATGCTCATTCAAGCTCACTCCCCAAACCCACATGTCTTCTTCCTTCCCAGAAGCCCTTCAACTTCCCGCCATTTCTCCGTCCATGGTAAGATGCTTGATTTCATTTGTTGTGGGAATGCTTCATCTGGGAATTTACTTAGTCTTCTACTTATTTTTTTGCATTGATCGAACAGTTTCTCATTCACGTGGACTCAAAGCGCCGATGGGGCGACGAAATGAACCATTGTCTAGGATTTCGGCTTCGGGGGAGCACAGTCCAACCACCAATTCGGGGAAGAAAAGGTTCAACTCTTCGAAATTTCTCTTGACCACAACTTGATACCGAATTCCAATCTATGCACGATCTATTCTTTCAGAGGCATTGCCCAATAGTTTAATTTACAAGTTTTTTTTTTCCTGTTGTACATAGAAAGGTTTTCGAACACATTTCTCTGCTCAAAGCGAGGGAAAATATTTCAGAAGAAGAAGAGAACGATCTGCTTGATTATCTCTATACCACCCAGTATCAAATGCGGGGCATTGTTGCCGTTTCATTAGGTGAATTTCTAGCCTTCTGCTTTCTAAAATTATGGAAGTTCAGAATCTTGTGTGAAGCTTACTTTTCTTGTACCTGTGCAGGACGTGCCTGTGGCCAAAATAGTGAAAGCTATACCCATGGTGTGTATATGCGTTTCCAACGAAAGGAAGACCTTGAAAAATTCTATGTGAACCCTTTCTACTCGCGAGTACTAAATGAGCATGTGATGCCTTATTGTCATGTATGCCTCAACATGTAACCACCAATACTCTCAATCTAACTTCCTTTTTGTCTTGCTTTCCCGGAAGATTGTCTTGCTGTATCTGGCCAACTTATGAATTTGTTTCAATGTCTATAACAGGGATTGATTCATGTAGATTATGAATCAGAGGTGGAAGATGACATGCTTCCCATTTTTCGGAAAGGAGAGGTATGGACACTATCTAACTTTGTTCCTAGGATTTGTGTAAAATGCAGATCTCTATGTTCCATTGTCATGTATGTCATTATTTTGTTCTTTGATGAATGTTGCTTGCGTTGGTGTGATGTTATGCATTTCCTTTTAGCTTTTATTTCTTGAATATCTGGATTTCTCAGGGCTTGAAATTGCGGATTTTCGAGTGAGAATTTGTTTTTGACTTGGGGGAATGGGAGTATCATAATCTTTGGAGTGGGGAGAGCCTCAATCTTTAAATACTGAGCTCAAGTGGGTTGCTGACTTGACTTCTTTAAGGAAAAACATATTGAAGTTGGTTTGTTGATTTTTCTTCTCTTATTATTATGTTCTTTGTCATATATCATATACTAAATTTGAAATTCAAGGAAGTTACTTTGAAAATAGTGGATTTTAGGAGTCGTTGTTTGAAGGAACTGCTCGTGTGGGTAATGCCCGAAGCCAGAAATTTTTTGGAATGATAAAATCCTCTAAATCAAAATTATCTAAGTTTCATCAAACCGTTATCTGTTGCATTGAAAACCTGATTTCTTGTGTTTAATGTCATTTGAGGTCTTGTATAGTTGTTGTTTTGAGATGTTGACTATGTCAAGCTATTTGTATTGAAAAGTAGATCTGTTTTTCATATCAGTTGTATGCCTTCTAATGATCTCTGAAAATATGGACTTAATAAAAAAATATAGTAACACAGAGTTTTGATGTCAGGAGTTCAATTATGGTGTGGAGTTTGTGCTTCTCATTAAATTTCTTCAAGATTCATTTGGAAAACCTTTAGAAGACGCATTAAATTCTCTCGAGCAACTGGCAATTGATAACCCTTCTTTAATTGTCCAGTTTACACAAGGTATACTTTTATATCGAATCATTCGTTCCGAAACTTGGAGAGAACATCAACATGTATTATTATAGCTGTCGATTTTGAATTTGATATAAATTACTATTGACATGCATCACAATATATGTGATGAGATCGTCTTTAGCTAATCTGTACTAATAAGTTATTCTTTTCAGATATCAGGTAGTGGGATTTTTATGTTTTGAATTCATATCAGGTTTAAATTTTAATCCCAGTTGTAAGGAGTTCACACATGGAGTTGTTATACGATTTCGGTCAAGTAAGCACTTGTATGACGTTGTGTTCTTTTATATTCAATAACGGGTCTTTTAATGGTCTTGCCTCAATATAACATGTTTTGCAGTCGAAGCCTTCGAGATGTTTACAGGCAGCTCAGATTACAAAGATGTAAGAAACCCCATCAATTAAGTCATCATATTTGCTGATCTGTTTTATCTGTTTAACTCGATTTGTCAGTGAAAACACCATCTGCTTATGCCTTTAATATATCTCCCTTCACTGTTGAACTCCAATACACCTATATCTTCTCCTGCCTCCATATTCTACATACTATCAGTAAAAAAAAATGAAAAACTTCAGTTCTGTGCCATGATAACATTTTAACACTAAAATTTGAAAACGTTTTAACCTCAAATTATGCGTATGTACTTGCTATGTCTTTTCTCAGAATAATCTGAGAAATTTCTTGAATATGACAACACAGCTACTGTATTTATTGTGGATGTCCTAATCGGTTTTCATTTCAAATGTAGATGTGGAGGTCTAAGTTTCAACCAATCATCCAGAAAACAGTGTCTCTTCATTTCTCTGTTGACCCAGTAGGGACTGAGATCATGTAGCAAGGAGTATTCTTGGTTTGTTCCCTATACATCATCCATCTCGAGTGACCCGTAGAAGATGGTAGGCCCAATATGATTTGAGTGAACTTTTTGTGGCAGGTTTTGGTACCAGACTTGGTTTTACTCTTAACAAGCGTAAGGACAAGTATATTGTTTTGTATTTTTGACGTTTCAGATCCGATGTCCTATTCCTCTCTGTTTTATCTTTCGTCATCTCGCCATTTGTTAATTTTTATGCATTTCAATCTGATAGAGGTATGTGGATTTCTGAAACTCTCTGTCTGCTTGAATGGTATTACAATTCTGCTTCCTCCCATTGAATATGTCCTAAAATTATTCTATGGGATTAGGATATTCTGATGATGGAGTCATATTTGGTTGACTTTATGATATTCTAAAGTCGTTCTATTTTTATGTAAACCCGAGATAGGTTACGAACTTGGATTTGTCACTAACCAATACGACAACTTCGGTGAAAATAACAAACGATGGAAAAACCTCTTCTATGGTGTGCATATGGACAATCAAATCTGAAGATGAGCTTTTACTGATGTTGAATCCTTACCAAAGAGATATATCAGGAGAATGACTCTTTCATGTATTGTTTGGCCTTGTATTGTAAACAGGAAAAACAGTAGAATTTAAAAGTGCGACTCATTTTGTCGACGACTTAAATAACTATATATCATTTTGTTCACTCTTCTAAAGTCAGCATTTAAATGACTTGAACTCCATCTCATTGTTCAGGCTTGGCTACCATTAATCTGACATGAAGACAGAATCAGGAGGTACAGGTTATTGCGACGTTCTCGACACCCACTCACTTGGATGGTGAGGCCATTTTATATGTGTTCTGGATGTTATTTTTCTATTTTGTACAACTCATATTATAGGTACTTGAGATATTGAATCTACAATGAGAGAAATCTGTATATCGAATCTTATGCAATTCGATGTTTGCGTTTATGCTTATTGTTTCCCCTCAAGGTGAGAGCTGAGG

mRNA sequence

GTTATGATGATCGGTTTTCGTAGTCCACCCATTTTTGTGTCCCATAGCTTCTCATCAATGTCCATGGCGGATCTTGAGGCTCAAACCTCGACTAACCCAAGCAATTTCAGATAGAGAGACCTCCACACTTTAACCATCGCAATGCTCATTCAAGCTCACTCCCCAAACCCACATGTCTTCTTCCTTCCCAGAAGCCCTTCAACTTCCCGCCATTTCTCCGTCCATGTTTCTCATTCACGTGGACTCAAAGCGCCGATGGGGCGACGAAATGAACCATTGTCTAGGATTTCGGCTTCGGGGGAGCACAGTCCAACCACCAATTCGGGGAAGAAAAGAAAGGTTTTCGAACACATTTCTCTGCTCAAAGCGAGGGAAAATATTTCAGAAGAAGAAGAGAACGATCTGCTTGATTATCTCTATACCACCCAGTATCAAATGCGGGGCATTGTTGCCGTTTCATTAGGACGTGCCTGTGGCCAAAATAGTGAAAGCTATACCCATGGTGTGTATATGCGTTTCCAACGAAAGGAAGACCTTGAAAAATTCTATGTGAACCCTTTCTACTCGCGAGTACTAAATGAGCATGTGATGCCTTATTGTCATGGATTGATTCATGTAGATTATGAATCAGAGGTGGAAGATGACATGCTTCCCATTTTTCGGAAAGGAGAGGAGTTCAATTATGGTGTGGAGTTTGTGCTTCTCATTAAATTTCTTCAAGATTCATTTGGAAAACCTTTAGAAGACGCATTAAATTCTCTCGAGCAACTGGCAATTGATAACCCTTCTTTAATTGTCCAGTTTACACAAGGTTTAAATTTTAATCCCAGTTGTAAGGAGTTCACACATGGAGTTGTTATACGATTTCGGTCAATCGAAGCCTTCGAGATGTTTACAGGCAGCTCAGATTACAAAGATATGTGGAGGTCTAAGTTTCAACCAATCATCCAGAAAACAGTGTCTCTTCATTTCTCTGTTGACCCAGTAGGGACTGAGATCATGTAGCAAGGAGTATTCTTGGTTTTGGTACCAGACTTGGTTTTACTCTTAACAAGCGCTTGGCTACCATTAATCTGACATGAAGACAGAATCAGGAGGTACAGGTTATTGCGACGTTCTCGACACCCACTCACTTGGATGGTGAGGCCATTTTATATGTGTTCTGGATGTTATTTTTCTATTTTGTACAACTCATATTATAGGTACTTGAGATATTGAATCTACAATGAGAGAAATCTGTATATCGAATCTTATGCAATTCGATGTTTGCGTTTATGCTTATTGTTTCCCCTCAAGGTGAGAGCTGAGG

Coding sequence (CDS)

ATGCTCATTCAAGCTCACTCCCCAAACCCACATGTCTTCTTCCTTCCCAGAAGCCCTTCAACTTCCCGCCATTTCTCCGTCCATGTTTCTCATTCACGTGGACTCAAAGCGCCGATGGGGCGACGAAATGAACCATTGTCTAGGATTTCGGCTTCGGGGGAGCACAGTCCAACCACCAATTCGGGGAAGAAAAGAAAGGTTTTCGAACACATTTCTCTGCTCAAAGCGAGGGAAAATATTTCAGAAGAAGAAGAGAACGATCTGCTTGATTATCTCTATACCACCCAGTATCAAATGCGGGGCATTGTTGCCGTTTCATTAGGACGTGCCTGTGGCCAAAATAGTGAAAGCTATACCCATGGTGTGTATATGCGTTTCCAACGAAAGGAAGACCTTGAAAAATTCTATGTGAACCCTTTCTACTCGCGAGTACTAAATGAGCATGTGATGCCTTATTGTCATGGATTGATTCATGTAGATTATGAATCAGAGGTGGAAGATGACATGCTTCCCATTTTTCGGAAAGGAGAGGAGTTCAATTATGGTGTGGAGTTTGTGCTTCTCATTAAATTTCTTCAAGATTCATTTGGAAAACCTTTAGAAGACGCATTAAATTCTCTCGAGCAACTGGCAATTGATAACCCTTCTTTAATTGTCCAGTTTACACAAGGTTTAAATTTTAATCCCAGTTGTAAGGAGTTCACACATGGAGTTGTTATACGATTTCGGTCAATCGAAGCCTTCGAGATGTTTACAGGCAGCTCAGATTACAAAGATATGTGGAGGTCTAAGTTTCAACCAATCATCCAGAAAACAGTGTCTCTTCATTTCTCTGTTGACCCAGTAGGGACTGAGATCATGTAG
Homology
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BLAST of CmoCh16G006360 vs. TrEMBL
Match: A0A0A0KUW3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G049070 PE=4 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 4.2e-141
Identity = 248/287 (86.41%), Postives = 265/287 (92.33%), Query Frame = 1 

Query: 1   MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60
           MLIQA+S NPH FFLP +PS S H S +VSHS  LK+P+GRR E +SRISASGEH+PT  
Sbjct: 1   MLIQAYSQNPHFFFLPSNPSISPHLSFNVSHSPKLKSPVGRRYESMSRISASGEHNPTII 60

Query: 61  SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120
            GKKRKVFEHISLLKA+ENISEEEEND+LDYLYTTQYQMRGIVAVSLGRAC QN+E YTH
Sbjct: 61  VGKKRKVFEHISLLKAKENISEEEENDMLDYLYTTQYQMRGIVAVSLGRACDQNNERYTH 120

Query: 121 GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
           GVYMRFQ KEDLEKFYVNPFY RVLNEHVMPYCHGL+HVDY+SEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQSKEDLEKFYVNPFYLRVLNEHVMPYCHGLVHVDYKSEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVI 240
           YGVEFVLLIKF QDSFGKPLEDALNSLE+L IDNPSLIVQFTQGLNFNPSCKEFTHGVVI
Sbjct: 181 YGVEFVLLIKFRQDSFGKPLEDALNSLERLTIDNPSLIVQFTQGLNFNPSCKEFTHGVVI 240

Query: 241 RFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           RFRSI AFE+FTGSS YKD+W+SKFQPIIQKTV+LHFSVDPVGTEIM
Sbjct: 241 RFRSINAFEIFTGSSQYKDIWKSKFQPIIQKTVALHFSVDPVGTEIM 287

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BLAST of CmoCh16G006360 vs. TrEMBL
Match: D7TW31_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g03940 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.2e-95
Identity = 187/296 (63.18%), Postives = 222/296 (75.00%), Query Frame = 1 

Query: 1   MLIQAHSPNP---HVFFLPRSP------STSRHFSVHVSHSRGLKAPMGRRNEPLSRISA 60
           M IQ  + +P   H FF  R P      S+SR     +  + G+        +  +  SA
Sbjct: 5   MCIQTPTFSPSTTHCFF--RQPISSPFLSSSRKLYNVLRLNGGVNVQFSNGKKRGAIFSA 64

Query: 61  SGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRAC 120
           S   + + ++  KRKV EHI LLKA+EN+SEEEE D+LDYLYTTQYQMRGI+A++LGR  
Sbjct: 65  SVGQNSSNDTEGKRKVVEHICLLKAKENLSEEEEKDMLDYLYTTQYQMRGIIAITLGRIS 124

Query: 121 GQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLP 180
            QN E+YTH VYMRFQRKEDL KFY NPFY  VL E VMPYCHGLI+VD+ESEVEDD+LP
Sbjct: 125 DQNIENYTHAVYMRFQRKEDLGKFYENPFYLGVLRERVMPYCHGLIYVDFESEVEDDILP 184

Query: 181 IFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGLNFNPSC 240
           IFRKGEEFNYGVEF+LLI F +  FG P EDAL SL +L ++ PSLIVQ TQGLNF PS 
Sbjct: 185 IFRKGEEFNYGVEFILLISFAKSKFGGPAEDALASLAELILEFPSLIVQSTQGLNFCPSS 244

Query: 241 KEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           KE+THGVVIRFRSIEA E+FTGS++YKD+WRSKFQ I+QKT+ +HFSVDPVGTEIM
Sbjct: 245 KEYTHGVVIRFRSIEALELFTGSTEYKDIWRSKFQMIVQKTLPIHFSVDPVGTEIM 298

[Close]
BLAST of CmoCh16G006360 vs. TrEMBL
Match: V4UEW7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016122mg PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.2e-95
Identity = 180/285 (63.16%), Postives = 219/285 (76.84%), Query Frame = 1 

Query: 3   IQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSG 62
           ++ H PNP       SPS S + S     +  +   + R     + + AS E S + NS 
Sbjct: 16  LKCHRPNPGFL----SPSVSLNVS---RWNEAMSMRLSRERTVGTTVLASKEQSSSYNSE 75

Query: 63  KKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTHGV 122
           KKRKV EHI LLKA++++SEEEEND+LDYLYT+QYQM GIVA+SLGR   +N E+YTHGV
Sbjct: 76  KKRKVVEHICLLKAKKDLSEEEENDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGV 135

Query: 123 YMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYG 182
           +MRFQRKE L KFY NPFYS+VL EHVMPYCHGL++VDYE+EVEDD+LPIFRKGE+FN+G
Sbjct: 136 FMRFQRKEQLVKFYENPFYSKVLKEHVMPYCHGLMNVDYETEVEDDILPIFRKGEDFNFG 195

Query: 183 VEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRF 242
           VEFVLLI F+Q +FG P EDAL SL++L  + PSLIVQ TQG NFN S + +TH VVIR 
Sbjct: 196 VEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRL 255

Query: 243 RSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           RS+EAFEMF GSSDYK+MW +KFQPII+  + +HFSVDPVGTEIM
Sbjct: 256 RSVEAFEMFVGSSDYKEMWSNKFQPIIRTQLPVHFSVDPVGTEIM 293

[Close]
BLAST of CmoCh16G006360 vs. TrEMBL
Match: W9QHG1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024322 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.3e-94
Identity = 181/288 (62.85%), Postives = 219/288 (76.04%), Query Frame = 1 

Query: 1   MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRG-LKAPMGRRNEPLSRISASGEHSPTT 60
           MLIQAH+      +  ++P  SR   V+VS   G LK   GR       +SAS E S +T
Sbjct: 1   MLIQAHNLTSSPIYRLQNPIISRPLGVNVSQLNGVLKTRFGRNKRWGMTVSASVEQSSST 60

Query: 61  NSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYT 120
           N  KKRKV EHI LLKA+ ++SEEEEN++LDYLYTTQYQM GI+++SLGR   +N E+YT
Sbjct: 61  NLEKKRKVVEHICLLKAKVDLSEEEENNMLDYLYTTQYQMGGILSISLGRISNRNDENYT 120

Query: 121 HGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEF 180
           H VYMRFQRKE+LEKFY  PFY  VL EHV PYCHGL+++DYESEVEDD+LPIFRKGEEF
Sbjct: 121 HAVYMRFQRKEELEKFYEKPFYLGVLKEHVSPYCHGLLNLDYESEVEDDILPIFRKGEEF 180

Query: 181 NYGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVV 240
           N GVEFVLLI F+ D+ G  +EDAL SL+ L I  PSLI Q TQG NFN   KE+TH +V
Sbjct: 181 NNGVEFVLLISFVDDAIG-AIEDALASLQSLTIGFPSLIAQSTQGRNFNLKTKEYTHAMV 240

Query: 241 IRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           IRFRS EA E+F GSS+YKDMWR+KF+PII++T+S+HF VDP+GTE+M
Sbjct: 241 IRFRSPEALEIFEGSSEYKDMWRTKFEPIIRRTLSVHFLVDPIGTELM 287

[Close]
BLAST of CmoCh16G006360 vs. TrEMBL
Match: A0A067EI34_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022676mg PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.3e-94
Identity = 178/286 (62.24%), Postives = 218/286 (76.22%), Query Frame = 1 

Query: 3   IQAHSPNPHVFFLPRSPSTSRHFSVHVSH-SRGLKAPMGRRNEPLSRISASGEHSPTTNS 62
           ++ H PNP           S   S++VS  +  +   + R     + + AS E S + NS
Sbjct: 16  LKCHRPNPGFL--------SSSVSLNVSRWNEAMSMRLSRERTVGTTVLASKEQSSSYNS 75

Query: 63  GKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTHG 122
            KKRKV EHI LLKA++++SEEEE D+LDYLYT+QYQM GIVA+SLGR   +N E+YTHG
Sbjct: 76  EKKRKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHG 135

Query: 123 VYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNY 182
           V+MRFQRKE L KFY NPFYS+VL EHVMPYCHGL++VDYE+EVEDD+LPIFRKGE+FN+
Sbjct: 136 VFMRFQRKEHLVKFYENPFYSKVLKEHVMPYCHGLMNVDYETEVEDDILPIFRKGEDFNF 195

Query: 183 GVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIR 242
           GVEFVLLI F+Q +FG P EDAL SL++L  + PSLIVQ TQG NFN S + +TH VVIR
Sbjct: 196 GVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIR 255

Query: 243 FRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
            RS+EAFEMF GSSDYK+MW +KFQPII+  + +HFSVDPVGTEIM
Sbjct: 256 LRSVEAFEMFVGSSDYKEMWSNKFQPIIRTQLPVHFSVDPVGTEIM 293

[Close]
BLAST of CmoCh16G006360 vs. TAIR10
Match: AT2G32500.1 (AT2G32500.1 Stress responsive alpha-beta barrel domain protein)

HSP 1 Score: 313.9 bits (803), Expect = 1.0e-85
Identity = 158/273 (57.88%), Postives = 200/273 (73.26%), Query Frame = 1 

Query: 15  LPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLL 74
           LPR P  +R F   VS+  G+     R   P     A+ +   ++ S K RKV EH+ LL
Sbjct: 8   LPR-PILTRGF---VSNGGGMFVHQCRTKTPRVTFCAADDQIASSKSNKTRKVVEHVCLL 67

Query: 75  KARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEK 134
           KA+E +SEE E D+LDYLYTTQYQMRGIVA+S+G    +N+E +TH +YMRFQ+KEDL+K
Sbjct: 68  KAKEGLSEEVEKDMLDYLYTTQYQMRGIVAISVGCIGDRNNEYFTHALYMRFQKKEDLDK 127

Query: 135 FYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQD 194
           FY NPF+ +VLNE+V P+CHGL +VDYESEVEDD+L IFRKGEE+NYG EFVLLI F + 
Sbjct: 128 FYENPFFLKVLNEYVTPFCHGLTNVDYESEVEDDILAIFRKGEEYNYGEEFVLLITFAKS 187

Query: 195 SFGKPLEDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGS 254
           +  K  +DA++S  QL    PSLIVQ TQG NFN S KEFTH  V+RFRS +A E+F   
Sbjct: 188 ASEKNTKDAMDSFAQLTSSLPSLIVQSTQGSNFNGSSKEFTHAAVVRFRSFDAMEIFFEG 247

Query: 255 SDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
            +YKDMWRS+F+P I+K+ +LHFSVDPVGT++M
Sbjct: 248 REYKDMWRSQFEPFIEKSEALHFSVDPVGTDVM 276

[Close]
BLAST of CmoCh16G006360 vs. NCBI nr
Match: gi|778690882|ref|XP_011653184.1| (PREDICTED: uncharacterized protein LOC101221322 [Cucumis sativus])

HSP 1 Score: 508.8 bits (1309), Expect = 6.0e-141
Identity = 248/287 (86.41%), Postives = 265/287 (92.33%), Query Frame = 1 

Query: 1   MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60
           MLIQA+S NPH FFLP +PS S H S +VSHS  LK+P+GRR E +SRISASGEH+PT  
Sbjct: 1   MLIQAYSQNPHFFFLPSNPSISPHLSFNVSHSPKLKSPVGRRYESMSRISASGEHNPTII 60

Query: 61  SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120
            GKKRKVFEHISLLKA+ENISEEEEND+LDYLYTTQYQMRGIVAVSLGRAC QN+E YTH
Sbjct: 61  VGKKRKVFEHISLLKAKENISEEEENDMLDYLYTTQYQMRGIVAVSLGRACDQNNERYTH 120

Query: 121 GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
           GVYMRFQ KEDLEKFYVNPFY RVLNEHVMPYCHGL+HVDY+SEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQSKEDLEKFYVNPFYLRVLNEHVMPYCHGLVHVDYKSEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVI 240
           YGVEFVLLIKF QDSFGKPLEDALNSLE+L IDNPSLIVQFTQGLNFNPSCKEFTHGVVI
Sbjct: 181 YGVEFVLLIKFRQDSFGKPLEDALNSLERLTIDNPSLIVQFTQGLNFNPSCKEFTHGVVI 240

Query: 241 RFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           RFRSI AFE+FTGSS YKD+W+SKFQPIIQKTV+LHFSVDPVGTEIM
Sbjct: 241 RFRSINAFEIFTGSSQYKDIWKSKFQPIIQKTVALHFSVDPVGTEIM 287

[Close]
BLAST of CmoCh16G006360 vs. NCBI nr
Match: gi|659102220|ref|XP_008452014.1| (PREDICTED: uncharacterized protein LOC103493150 isoform X1 [Cucumis melo])

HSP 1 Score: 500.7 bits (1288), Expect = 1.6e-138
Identity = 243/287 (84.67%), Postives = 262/287 (91.29%), Query Frame = 1 

Query: 1   MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60
           MLIQA+S NPH FFLP +PS S H S +VSHS  LK+P+GRR E +SRISASGEH+PT  
Sbjct: 1   MLIQAYSQNPHFFFLPPNPSISPHLSFNVSHSPKLKSPVGRRYESMSRISASGEHNPTII 60

Query: 61  SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120
            GKKRKVFEHISLLKA+ENISE+EEND+LDYLYTTQYQMRGIVAVSLGRAC QN+  YTH
Sbjct: 61  LGKKRKVFEHISLLKAKENISEDEENDMLDYLYTTQYQMRGIVAVSLGRACDQNNGRYTH 120

Query: 121 GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
           GVYMRFQ KEDLEKFYVNPFY RVLNEHVMPYCHGL+HVDYESEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQSKEDLEKFYVNPFYLRVLNEHVMPYCHGLVHVDYESEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVI 240
           YGVEFVLLIKF QDSFGKPLEDALNSLE+L IDNPSLIVQFTQGLNFNP+CKEFTHGVVI
Sbjct: 181 YGVEFVLLIKFCQDSFGKPLEDALNSLERLTIDNPSLIVQFTQGLNFNPTCKEFTHGVVI 240

Query: 241 RFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           RFRSI AFE+FT S++YKD W+SKFQPI+QKTV LHFSVDPVGTEIM
Sbjct: 241 RFRSINAFEIFTSSTEYKDTWKSKFQPIVQKTVPLHFSVDPVGTEIM 287

[Close]
BLAST of CmoCh16G006360 vs. NCBI nr
Match: gi|659102228|ref|XP_008452019.1| (PREDICTED: uncharacterized protein LOC103493150 isoform X2 [Cucumis melo])

HSP 1 Score: 449.1 bits (1154), Expect = 5.7e-123
Identity = 219/259 (84.56%), Postives = 236/259 (91.12%), Query Frame = 1 

Query: 1   MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60
           MLIQA+S NPH FFLP +PS S H S +VSHS  LK+P+GRR E +SRISASGEH+PT  
Sbjct: 1   MLIQAYSQNPHFFFLPPNPSISPHLSFNVSHSPKLKSPVGRRYESMSRISASGEHNPTII 60

Query: 61  SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120
            GKKRKVFEHISLLKA+ENISE+EEND+LDYLYTTQYQMRGIVAVSLGRAC QN+  YTH
Sbjct: 61  LGKKRKVFEHISLLKAKENISEDEENDMLDYLYTTQYQMRGIVAVSLGRACDQNNGRYTH 120

Query: 121 GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
           GVYMRFQ KEDLEKFYVNPFY RVLNEHVMPYCHGL+HVDYESEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQSKEDLEKFYVNPFYLRVLNEHVMPYCHGLVHVDYESEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVI 240
           YGVEFVLLIKF QDSFGKPLEDALNSLE+L IDNPSLIVQFTQGLNFNP+CKEFTHGVVI
Sbjct: 181 YGVEFVLLIKFCQDSFGKPLEDALNSLERLTIDNPSLIVQFTQGLNFNPTCKEFTHGVVI 240

Query: 241 RFRSIEAFEMFTGSSDYKD 260
           RFRSI AFE+FT S++YKD
Sbjct: 241 RFRSINAFEIFTSSTEYKD 259

[Close]
BLAST of CmoCh16G006360 vs. NCBI nr
Match: gi|731379387|ref|XP_010660971.1| (PREDICTED: uncharacterized protein LOC100244522 isoform X1 [Vitis vinifera])

HSP 1 Score: 357.8 bits (917), Expect = 1.7e-95
Identity = 187/296 (63.18%), Postives = 222/296 (75.00%), Query Frame = 1 

Query: 1   MLIQAHSPNP---HVFFLPRSP------STSRHFSVHVSHSRGLKAPMGRRNEPLSRISA 60
           M IQ  + +P   H FF  R P      S+SR     +  + G+        +  +  SA
Sbjct: 5   MCIQTPTFSPSTTHCFF--RQPISSPFLSSSRKLYNVLRLNGGVNVQFSNGKKRGAIFSA 64

Query: 61  SGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRAC 120
           S   + + ++  KRKV EHI LLKA+EN+SEEEE D+LDYLYTTQYQMRGI+A++LGR  
Sbjct: 65  SVGQNSSNDTEGKRKVVEHICLLKAKENLSEEEEKDMLDYLYTTQYQMRGIIAITLGRIS 124

Query: 121 GQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLP 180
            QN E+YTH VYMRFQRKEDL KFY NPFY  VL E VMPYCHGLI+VD+ESEVEDD+LP
Sbjct: 125 DQNIENYTHAVYMRFQRKEDLGKFYENPFYLGVLRERVMPYCHGLIYVDFESEVEDDILP 184

Query: 181 IFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGLNFNPSC 240
           IFRKGEEFNYGVEF+LLI F +  FG P EDAL SL +L ++ PSLIVQ TQGLNF PS 
Sbjct: 185 IFRKGEEFNYGVEFILLISFAKSKFGGPAEDALASLAELILEFPSLIVQSTQGLNFCPSS 244

Query: 241 KEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           KE+THGVVIRFRSIEA E+FTGS++YKD+WRSKFQ I+QKT+ +HFSVDPVGTEIM
Sbjct: 245 KEYTHGVVIRFRSIEALELFTGSTEYKDIWRSKFQMIVQKTLPIHFSVDPVGTEIM 298

[Close]
BLAST of CmoCh16G006360 vs. NCBI nr
Match: gi|567910545|ref|XP_006447586.1| (hypothetical protein CICLE_v10016122mg [Citrus clementina])

HSP 1 Score: 357.8 bits (917), Expect = 1.7e-95
Identity = 180/285 (63.16%), Postives = 219/285 (76.84%), Query Frame = 1 

Query: 3   IQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSG 62
           ++ H PNP       SPS S + S     +  +   + R     + + AS E S + NS 
Sbjct: 16  LKCHRPNPGFL----SPSVSLNVS---RWNEAMSMRLSRERTVGTTVLASKEQSSSYNSE 75

Query: 63  KKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTHGV 122
           KKRKV EHI LLKA++++SEEEEND+LDYLYT+QYQM GIVA+SLGR   +N E+YTHGV
Sbjct: 76  KKRKVVEHICLLKAKKDLSEEEENDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGV 135

Query: 123 YMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYG 182
           +MRFQRKE L KFY NPFYS+VL EHVMPYCHGL++VDYE+EVEDD+LPIFRKGE+FN+G
Sbjct: 136 FMRFQRKEQLVKFYENPFYSKVLKEHVMPYCHGLMNVDYETEVEDDILPIFRKGEDFNFG 195

Query: 183 VEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRF 242
           VEFVLLI F+Q +FG P EDAL SL++L  + PSLIVQ TQG NFN S + +TH VVIR 
Sbjct: 196 VEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRL 255

Query: 243 RSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM 288
           RS+EAFEMF GSSDYK+MW +KFQPII+  + +HFSVDPVGTEIM
Sbjct: 256 RSVEAFEMFVGSSDYKEMWSNKFQPIIRTQLPVHFSVDPVGTEIM 293

The following BLAST results are available for this feature:
BLAST of CmoCh16G006360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh16G006360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUW3_CUCSA4.2e-14186.41Uncharacterized protein OS=Cucumis sativus GN=Csa_4G049070 PE=4 SV=1[more]
D7TW31_VITVI1.2e-9563.18Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g03940 PE=4 SV=... [more]
V4UEW7_9ROSI1.2e-9563.16Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016122mg PE=4 SV=1[more]
W9QHG1_9ROSA1.3e-9462.85Uncharacterized protein OS=Morus notabilis GN=L484_024322 PE=4 SV=1[more]
A0A067EI34_CITSI2.3e-9462.24Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022676mg PE=4 SV=1[more]
BLAST of CmoCh16G006360 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G32500.11.0e-8557.88 Stress responsive alpha-beta barrel domain protein[more]
BLAST of CmoCh16G006360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778690882|ref|XP_011653184.1|6.0e-14186.41PREDICTED: uncharacterized protein LOC101221322 [Cucumis sativus][more]
gi|659102220|ref|XP_008452014.1|1.6e-13884.67PREDICTED: uncharacterized protein LOC103493150 isoform X1 [Cucumis melo][more]
gi|659102228|ref|XP_008452019.1|5.7e-12384.56PREDICTED: uncharacterized protein LOC103493150 isoform X2 [Cucumis melo][more]
gi|731379387|ref|XP_010660971.1|1.7e-9563.18PREDICTED: uncharacterized protein LOC100244522 isoform X1 [Vitis vinifera][more]
gi|567910545|ref|XP_006447586.1|1.7e-9563.16hypothetical protein CICLE_v10016122mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011008Dimeric_a/b-barrel
IPR013097Dabb
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G006360.1CmoCh16G006360.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011008Dimeric alpha-beta barrelunknownSSF54909Dimeric alpha+beta barrelcoord: 67..171
score: 3.4E-14coord: 183..282
score: 2.9
IPR013097Stress responsive alpha-beta barrelPFAMPF07876Dabbcoord: 187..278
score: 1.1E-5coord: 69..162
score: 4.3
IPR013097Stress responsive alpha-beta barrelSMARTSM00886Dabb_2coord: 183..279
score: 0.019coord: 68..163
score: 2.
IPR013097Stress responsive alpha-beta barrelPROFILEPS51502S_R_A_B_BARRELcoord: 68..161
score: 20.156coord: 183..277
score: 14
NoneNo IPR availableGENE3DG3DSA:3.30.70.900coord: 183..278
score: 3.8E-8coord: 63..162
score: 1.2
NoneNo IPR availablePANTHERPTHR33178FAMILY NOT NAMEDcoord: 21..287
score: 2.5E
NoneNo IPR availablePANTHERPTHR33178:SF1SUBFAMILY NOT NAMEDcoord: 21..287
score: 2.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh16G006360Cucsa.106890Cucumber (Gy14) v1cgycmoB0244
CmoCh16G006360CmaCh16G005870Cucurbita maxima (Rimu)cmacmoB322
CmoCh16G006360Csa4G049070Cucumber (Chinese Long) v2cmocuB325
CmoCh16G006360MELO3C016345Melon (DHL92) v3.5.1cmomeB294
CmoCh16G006360ClCG07G007980Watermelon (Charleston Gray)cmowcgB294
CmoCh16G006360CSPI04G05870Wild cucumber (PI 183967)cmocpiB332
CmoCh16G006360Lsi07G008970Bottle gourd (USVL1VR-Ls)cmolsiB317
CmoCh16G006360Cp4.1LG14g02330Cucurbita pepo (Zucchini)cmocpeB307
CmoCh16G006360MELO3C016345.2Melon (DHL92) v3.6.1cmomedB336
CmoCh16G006360CsaV3_4G006040Cucumber (Chinese Long) v3cmocucB0388
CmoCh16G006360Cla97C07G135140Watermelon (97103) v2cmowmbB336
CmoCh16G006360Bhi01G001794Wax gourdcmowgoB0428
CmoCh16G006360CsGy4G005730Cucumber (Gy14) v2cgybcmoB467
CmoCh16G006360Carg22210Silver-seed gourdcarcmoB0803
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh16G006360Cucumber (Chinese Long) v2cmocuB330
CmoCh16G006360Melon (DHL92) v3.5.1cmomeB277
CmoCh16G006360Watermelon (Charleston Gray)cmowcgB284
CmoCh16G006360Watermelon (97103) v1cmowmB313
CmoCh16G006360Watermelon (97103) v1cmowmB301
CmoCh16G006360Cucurbita pepo (Zucchini)cmocpeB313
CmoCh16G006360Bottle gourd (USVL1VR-Ls)cmolsiB288
CmoCh16G006360Bottle gourd (USVL1VR-Ls)cmolsiB310
CmoCh16G006360Cucumber (Gy14) v2cgybcmoB309
CmoCh16G006360Cucumber (Gy14) v2cgybcmoB596
CmoCh16G006360Melon (DHL92) v3.6.1cmomedB314
CmoCh16G006360Silver-seed gourdcarcmoB1258
CmoCh16G006360Cucumber (Chinese Long) v3cmocucB0400
CmoCh16G006360Cucumber (Chinese Long) v3cmocucB0403
CmoCh16G006360Watermelon (97103) v2cmowmbB311
CmoCh16G006360Watermelon (97103) v2cmowmbB330
CmoCh16G006360Cucurbita moschata (Rifu)cmocmoB238
CmoCh16G006360Cucurbita moschata (Rifu)cmocmoB285
CmoCh16G006360Cucumber (Gy14) v1cgycmoB0825
CmoCh16G006360Cucurbita maxima (Rimu)cmacmoB290
CmoCh16G006360Cucurbita maxima (Rimu)cmacmoB700
CmoCh16G006360Wild cucumber (PI 183967)cmocpiB338