Carg22210 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22210
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Stress responsive alpha-beta barrel domain protein
Location	Cucurbita_argyrosperma_scaffold_174 : 74626 .. 78657 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGGTTTTCGTAGTCCACCCATTTTTGTGTCCCATAGCTTCTCATCAATGTCCATGGCGGATCTTGAGGCTCAAACCTCGACTAACCCAAGCAATTTCAGATAGAGAGACCTCCACACTTTAACCATCGCAATGCTCATTCAAGCTCACTCCCCAAACCCACATGTCTTCTTCCTTCCCAGAAGCCCTTCAACTTCCCGCCATTTCTCCGTCCATGGTAAGATGCTTGATTTCATTTGTTGTGGGAATGCTTCATCTGGGAATTTACTTGGTCTTCTACTTATTTTTTTGCATTGATCGAACAGTTTCTCATTCACGTGGACTCAAAGCGCCGATGGGGCGACGAAATGAACCATTGTCTAGGATTTCGGCTTCGGGGGAGCACAGTCCAACCACCAATTCGGGGAAGAAAAGGTTCAACTCTTCGAAATTTCTCTTGACCAAAACTTGATACCGAATTCCAATCTATGCACGATCTATTCTTTCAGAGGCATTGCCCAATAGTTTTAATTTACAAGTTTTTTTTTTCCTGTTGTACATAGAAAGGTTTTCGAACACATTTCTCTGCTCAAAGCGAGGGAAAATATTTCAGAAGAAGAAGAGAACGATCTGCTTGATTATCTCTATACCACCCAGTATCAAATGCGGGGCATTGTTGCCGTTTCATTAGGTGAATTTCTAGCCTTCTGCTTTCTAAAATTATGGAAGTTCAGAATCTTGTGTGAAGCTTACTTTTCTTGTAACTGTGCAGGACGTGCCTGTGGCCAAAATAGTGAAAGCTATACCCATGGTGTGTATATGCGTTTCCAACGAAAGGAAGACCTTGAAAAATTCTATGTGAACCCTTTCTACTCGCGAGTACTAAATGAGCATGTGATGCCTTATTGTCATGTATGCCTCAACATGTAACCACCAATACTCTCAATCTAACTTCCTTTTTGTCTTGCTTTCCCGGAAGATTGTCTTGCTGTATCTGGCCAACTTATGAATTTGTTTCAATGTCTATAACAGGGATTGATTCATGTAGATTATGAATCAGAGGTGGAAGATGACATGCTTCCCATATTTCGGAAAGGAGAGGTATGGACACTATCTAACTTTGTTCTTAGGATTTGTGTAAAATGCAGATCTCCATGTTCCATTGTCATGTATGTCATTATTTTGTTCTTTGATGAATGTTGCTTGCGTTGGTATGATGTTATGCATTTCCTTTTAGCTTTTATTTCTTGAATATCTGGATTTCTCAGGGCTTGAAATTGCGGGTTTTCGAGTGAGAATTTGTTTTTGACTTGGGGGAATGGGAGTATCATAATCTTTGGAGTGGGGAGAGCCTCAATCTTTAAATACTGAGCTCAAGTGGGTTGCTGACTTGACTTCTTTAAGGAAAAACATATTGAAGTTGGTTTGTTGATTTTTCTTCTCTTATTATTATGTTCTTTGTCATATATCATATACTAAATTTGAAATTCAAGGAAGTTACTTTGAAAATAGTGGATCTTAGGAGTCGTTGTTTGAAGGAACTGCTCGTGTGGGTAATGCCCGAAGCCAGAAATTTCTTGGAATGATAAAATCCTCTAAATCAAAATATCTAAGTTTCATCAAGCCGTTATCTGTTGCATTGAAAACCTGATTTCTTGTGTTTAATGTCATTTGAGGTCTTGTATAGTTGTTGTTTTGAGATGTTGACTATGTCAAGCTATTTGTATTGAAAAGTAGATCTGGTTTTTCCTATCAGTTGTATGCCTTCTAATGATCTCTGAAAATATGGACTTAATAAAAAAATATAGTAACACAGAGTTTTGATGTCAGGAGTTCAATTATGGTGTGGAGTTTGTGCTTCTCATTAAATTTCTTCAAGATTCATTTGGAAAACCTTTAGAAGACGCATTAAATTCTCTCGAGCAACTGGCAATTGATAACCCTTCTTTAATTGTCCAGTTTACACAAGGTATACTTTTATATCGAATCATTCGTTCCGAAACTTGGAGAGAACATCAACATGTATTATTATAGCTGTCGATTTTGAATTTGATATAAATTACTATTGACATGCATCACAATATATGTGATGAGATCGTCTTTAGCTAATCTGTACTAATAAGTTATTCTTTTCAGATATCAGGTAGTGGGATTTTTATGTTTTGAATTCATATCAGGTTTAAATTTTAATCCCAGTTGTAAGGAGTTCACACATGGAGTTGTTATACGATTTCGGTCAAGTAAGCACTTGTATGACGTTGTGTTCTTTTATATTCCATAACGGGTCTTTTAATGGTCTCACCTCAATATAACATGTTTTGCAGTCGAAGCCTTCGAGATGTTTACAGGCAGCTCAGATTACAAAGATGTAAGAAACCCCATCAATTAAGTCATCATATTTGCTGATGTGGTTTTTCTGTGTAACTCGATTCGTCAGTGAAAACACCATCTGCTTATGCCTTTAATACATCTCCCTTCACTGTTGAACTTCAATACACCTATATCTGCTCCTGCCTCCATATTCTACATACTATCAGTAAAAAAAAATGAAAAACTTTAGTTCAGTGCCATGATAACATTTTAACACTGAAATTTGAAAACGTTTTAACCTCAAATTGTGCGTATGTACATGCTATGTTTTTTCTCAGAATCATCTGAGAAATTTCTTGAATATGACAACACAGCTACTGTATTTATTGTGGATGTCCTAATCGGTTTTCATTTCAAATGTAGATGTGGAGGTCTAAGTTTCAACCAATCATCCAGAAAACAGTGTCTCTTCACTTCTCTGTTGACCCAGTAGGGACTGAGATCATGTAGCAAGGAGTATTCTTGGTTTGTTCCCTATACATCATCCATCTCGAGTGACCCGTAGAAGATGGTAGGCTCAATATGATTTGAGTGAACTTTTTGTGGCAGGTTTTGGTACCAGACTTGGTTTTACTCTTAACAAGCGTAAGGACAAGTATATTGTTTTGTATTTTTGACGTTTCAGATCCGATGTCCTATTCCTCTCTGTTTTATCTTTCGTCATCTCGCCATTTGTTAATTTTTATGCATTTCAATCTGATAGAGGTATGTGGATTTCTGAAACTCTCTGTCTGCTTGAATGGTATTACAATTCTGCTTCCTCCCATTGAATATGTCCTAAAATTATTCTATGGGATTAGGATATTCTGATGATGGAGTCATATTTGGTTGACTTTATGATATTCTAAATTCGTTCTATTTTTATGTAAACCCGAGATAGGTTATGAACTTGGATTTGTCACTAACCATTACGACAACTTCGGTGAAAATAACAAACGATGGAAAAACCTCTTCTGTGGTGTGCATATGGACAATCAAATCTGAAGATGAGCTTTTACTGATGTTGAATCCTTACCAAAGAGATATATCAGGAGAATGACTCTTTCATGTATTGTTTGGCCTTGTATTGTAAACAGGAAAAACAGTAGAATTTAAAAGTGCGACTCATTTTGTCGACGACTTAAATAACTATATATCATTTTGTTCACTCTTCTAAAGTCAGCATTTAAATGACTTGAACTCCATCTCATTGTTCAGGCTTGGCTACCATTAATCTGACATGAAGACAGAATCAGGAGGTACAGGTTATTGCGACGTTCTCGACACCCACTCACTTGGATGGTGAGGCCATTTTATATGTGTTCTGGATGTTATTTTTCTATTTTGTAGAACTCATATTATAGGTACTTGAGATATTGAATCTACAATGAGAGAAATCTGTATATCGAATCTTATGCAATTCGATGTTTGCGTTTATGCTTATTGTTTCCCCTCAAGGTGAGAGCTGAGGCTTTCTACTTAATTTTATTTTGTGCAAACACAAAAAAACCGCTTGGGAACATATGATCTTAGTTATTGTTCAACTAGTTAAACGACTAACTTAGCCGAAACAGGCTGTCTCCTTCAACACTCGGAGGCTGCTGCTAAATCTTTAATGGGTTCCATAAGTTCTCTTGTTATTAAGTTCAACCCTATATGTTATGTATACATGAAAGGAAATCACATGCTTTTGGATTTAGC

mRNA sequence

ATGATCGGTTTTCGTAGTCCACCCATTTTTGTGTCCCATAGCTTCTCATCAATGTCCATGGCGGATCTTGAGGCTCAAACCTCGACTAACCCAAGCAATTTCAGATAGAGAGACCTCCACACTTTAACCATCGCAATGCTCATTCAAGCTCACTCCCCAAACCCACATGTCTTCTTCCTTCCCAGAAGCCCTTCAACTTCCCGCCATTTCTCCGTCCATGTTTCTCATTCACGTGGACTCAAAGCGCCGATGGGGCGACGAAATGAACCATTGTCTAGGATTTCGGCTTCGGGGGAGCACAGTCCAACCACCAATTCGGGGAAGAAAAGAAAGGTTTTCGAACACATTTCTCTGCTCAAAGCGAGGGAAAATATTTCAGAAGAAGAAGAGAACGATCTGCTTGATTATCTCTATACCACCCAGTATCAAATGCGGGGCATTGTTGCCGTTTCATTAGGACGTGCCTGTGGCCAAAATAGTGAAAGCTATACCCATGGTGTGTATATGCGTTTCCAACGAAAGGAAGACCTTGAAAAATTCTATGTGAACCCTTTCTACTCGCGAGTACTAAATGAGCATGTGATGCCTTATTGTCATGGATTGATTCATGTAGATTATGAATCAGAGGTGGAAGATGACATGCTTCCCATATTTCGGAAAGGAGAGGAGTTCAATTATGGTGTGGAGTTTGTGCTTCTCATTAAATTTCTTCAAGATTCATTTGGAAAACCTTTAGAAGACGCATTAAATTCTCTCGAGCAACTGGCAATTGATAACCCTTCTTTAATTGTCCAGTTTACACAAGGTATACTTTTATATCGAATCATTCGTTCCGAAACTTGGAGAGAACATCAACATGTAGTGGGATTTTTATGTTTTGAATTCATATCAGGTTTAAATTTTAATCCCAGTTGTAAGGAGTTCACACATGGAGTTGTTATACGATTTCGGTCAATCGAAGCCTTCGAGATGTTTACAGGCAGCTCAGATTACAAAGATATGTGGAGGTCTAAGTTTCAACCAATCATCCAGAAAACAGTGTCTCTTCACTTCTCTGTTGACCCAGTAGGGACTGAGATCATGTAGCAAGGAGTATTCTTGGTTTTGGTACCAGACTTGGTTTTACTCTTAACAAGCGTAAGGACAAGTATATTGTTTTGTATTTTTGACGTTTCAGATCCGATGTCCTATTCCTCTCTGTTTTATCTTTCGTCATCTCGCCATTTGTTAATTTTTATGCATTTCAATCTGATAGAGGTATGTGGATTTCTGAAACTCTCTGTCTGCTTGAATGGTATTACAATTCTGCTTCCTCCCATTGAATATGTCCTAAAATTATTCTATGGGATTAGGATATTCTGATGATGGAGTCATATTTGGTTGACTTTATGATATTCTAAATTCGTTCTATTTTTATGTAAACCCGAGATAGGTTATGAACTTGGATTTGTCACTAACCATTACGACAACTTCGGTGAAAATAACAAACGATGGAAAAACCTCTTCTGTGGTGTGCATATGGACAATCAAATCTGAAGATGAGCTTTTACTGATGTTGAATCCTTACCAAAGAGATATATCAGGAGAATGACTCTTTCATGTATTGTTTGGCCTTGTATTGTAAACAGGAAAAACAGTAGAATTTAAAAGTGCGACTCATTTTGTCGACGACTTAAATAACTATATATCATTTTGTTCACTCTTCTAAAGTCAGCATTTAAATGACTTGAACTCCATCTCATTGTTCAGGCTTGGCTACCATTAATCTGACATGAAGACAGAATCAGGAGGTACAGGTTATTGCGACGTTCTCGACACCCACTCACTTGGATGGTGAGGCCATTTTATATGTGTTCTGGATGTTATTTTTCTATTTTGTAGAACTCATATTATAGGTACTTGAGATATTGAATCTACAATGAGAGAAATCTGTATATCGAATCTTATGCAATTCGATGTTTGCGTTTATGCTTATTGTTTCCCCTCAAGGTGAGAGCTGAGGCTTTCTACTTAATTTTATTTTGTGCAAACACAAAAAAACCGCTTGGGAACATATGATCTTAGTTATTGTTCAACTAGTTAAACGACTAACTTAGCCGAAACAGGCTGTCTCCTTCAACACTCGGAGGCTGCTGCTAAATCTTTAATGGGTTCCATAAGTTCTCTTGTTATTAAGTTCAACCCTATATGTTATGTATACATGAAAGGAAATCACATGCTTTTGGATTTAGC

Coding sequence (CDS)

ATGCTCATTCAAGCTCACTCCCCAAACCCACATGTCTTCTTCCTTCCCAGAAGCCCTTCAACTTCCCGCCATTTCTCCGTCCATGTTTCTCATTCACGTGGACTCAAAGCGCCGATGGGGCGACGAAATGAACCATTGTCTAGGATTTCGGCTTCGGGGGAGCACAGTCCAACCACCAATTCGGGGAAGAAAAGAAAGGTTTTCGAACACATTTCTCTGCTCAAAGCGAGGGAAAATATTTCAGAAGAAGAAGAGAACGATCTGCTTGATTATCTCTATACCACCCAGTATCAAATGCGGGGCATTGTTGCCGTTTCATTAGGACGTGCCTGTGGCCAAAATAGTGAAAGCTATACCCATGGTGTGTATATGCGTTTCCAACGAAAGGAAGACCTTGAAAAATTCTATGTGAACCCTTTCTACTCGCGAGTACTAAATGAGCATGTGATGCCTTATTGTCATGGATTGATTCATGTAGATTATGAATCAGAGGTGGAAGATGACATGCTTCCCATATTTCGGAAAGGAGAGGAGTTCAATTATGGTGTGGAGTTTGTGCTTCTCATTAAATTTCTTCAAGATTCATTTGGAAAACCTTTAGAAGACGCATTAAATTCTCTCGAGCAACTGGCAATTGATAACCCTTCTTTAATTGTCCAGTTTACACAAGGTATACTTTTATATCGAATCATTCGTTCCGAAACTTGGAGAGAACATCAACATGTAGTGGGATTTTTATGTTTTGAATTCATATCAGGTTTAAATTTTAATCCCAGTTGTAAGGAGTTCACACATGGAGTTGTTATACGATTTCGGTCAATCGAAGCCTTCGAGATGTTTACAGGCAGCTCAGATTACAAAGATATGTGGAGGTCTAAGTTTCAACCAATCATCCAGAAAACAGTGTCTCTTCACTTCTCTGTTGACCCAGTAGGGACTGAGATCATGTAG

Protein sequence

MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGILLYRIIRSETWREHQHVVGFLCFEFISGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM

Homology

[Close]

BLAST of Carg22210 vs. NCBI nr
Match: XP_022931509.1 (stress-response A/B barrel domain-containing protein UP3 [Cucurbita moschata] >XP_022931510.1 stress-response A/B barrel domain-containing protein UP3 [Cucurbita moschata] >XP_023552210.1 stress-response A/B barrel domain-containing protein UP3 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 570.1 bits (1468), Expect = 4.7e-159
Identity = 287/316 (90.82%), Postives = 287/316 (90.82%), Query Frame = 0


Query: 1   MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60
           MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN
Sbjct: 1   MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60

Query: 61  SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120
           SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH
Sbjct: 61  SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120

Query: 121 GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
           GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGILLYRIIRSETWREHQ 240
           YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQ                 
Sbjct: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQ----------------- 240

Query: 241 HVVGFLCFEFISGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQK 300
                       GLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQK
Sbjct: 241 ------------GLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQK 287

Query: 301 TVSLHFSVDPVGTEIM 317
           TVSLHFSVDPVGTEIM
Sbjct: 301 TVSLHFSVDPVGTEIM 287

[Close]

BLAST of Carg22210 vs. NCBI nr
Match: XP_023552209.1 (stress-response A/B barrel domain-containing protein UP3 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552211.1 stress-response A/B barrel domain-containing protein UP3 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 565.5 bits (1456), Expect = 1.2e-157
Identity = 285/316 (90.19%), Postives = 285/316 (90.19%), Query Frame = 0


Query: 1   MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60
           MLIQAHSPNPHVFFLPRSPS SRH SVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN
Sbjct: 1   MLIQAHSPNPHVFFLPRSPSISRHLSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60

Query: 61  SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120
           SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH
Sbjct: 61  SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120

Query: 121 GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
           GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGILLYRIIRSETWREHQ 240
           YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQ                 
Sbjct: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQ----------------- 240

Query: 241 HVVGFLCFEFISGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQK 300
                       GLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQK
Sbjct: 241 ------------GLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQK 287

Query: 301 TVSLHFSVDPVGTEIM 317
           TVSLHFSVDPVGTEIM
Sbjct: 301 TVSLHFSVDPVGTEIM 287

[Close]

BLAST of Carg22210 vs. NCBI nr
Match: XP_022985456.1 (stress-response A/B barrel domain-containing protein UP3 isoform X1 [Cucurbita maxima] >XP_022985457.1 stress-response A/B barrel domain-containing protein UP3 isoform X1 [Cucurbita maxima])

HSP 1 Score: 558.9 bits (1439), Expect = 1.1e-155
Identity = 281/316 (88.92%), Postives = 284/316 (89.87%), Query Frame = 0


Query: 1   MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60
           MLIQA+SPNPH FFLPRSPSTSRH SVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN
Sbjct: 1   MLIQAYSPNPHAFFLPRSPSTSRHLSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60

Query: 61  SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120
            GKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH
Sbjct: 61  LGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120

Query: 121 GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
           GVYMRFQRKEDLEKFYVNPFYSR+LNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQRKEDLEKFYVNPFYSRILNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGILLYRIIRSETWREHQ 240
           YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQ                 
Sbjct: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQ----------------- 240

Query: 241 HVVGFLCFEFISGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQK 300
                       GLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQK
Sbjct: 241 ------------GLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQK 287

Query: 301 TVSLHFSVDPVGTEIM 317
           TVSL+FSVDPVGTEIM
Sbjct: 301 TVSLYFSVDPVGTEIM 287

[Close]

BLAST of Carg22210 vs. NCBI nr
Match: XP_022136509.1 (stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136510.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136511.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136512.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136513.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136514.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136515.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136516.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136518.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136519.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >XP_022136520.1 stress-response A/B barrel domain-containing protein UP3 [Momordica charantia])

HSP 1 Score: 501.9 bits (1291), Expect = 1.6e-138
Identity = 252/316 (79.75%), Postives = 266/316 (84.18%), Query Frame = 0


Query: 1   MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60
           MLIQAHSPNPH FFL  +PS SRHFS+HVSH  GLKAP+GRR+   S+ISASGEHSPT N
Sbjct: 1   MLIQAHSPNPHFFFLAPNPSVSRHFSLHVSHLCGLKAPIGRRSARTSKISASGEHSPTNN 60

Query: 61  SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120
            GKKRKVFEHISLLKA+ENISE+EEND+LDYLYTTQYQM GIVAVSLGRAC QN+E YTH
Sbjct: 61  LGKKRKVFEHISLLKAKENISEKEENDMLDYLYTTQYQMGGIVAVSLGRACDQNNERYTH 120

Query: 121 GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
            VYMRFQRKEDLEKFYVNPFYSRVL EHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN
Sbjct: 121 CVYMRFQRKEDLEKFYVNPFYSRVLKEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGILLYRIIRSETWREHQ 240
           YGVEFVLLIKFLQDSFG+PLEDALNSLE+L I NPSLIVQFTQ                 
Sbjct: 181 YGVEFVLLIKFLQDSFGEPLEDALNSLERLTIANPSLIVQFTQ----------------- 240

Query: 241 HVVGFLCFEFISGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQK 300
                       G NFNPSCKEFTHG+VIRFRSI AFE+FTG SDYK+MWRSKFQPIIQK
Sbjct: 241 ------------GFNFNPSCKEFTHGIVIRFRSINAFEIFTGCSDYKEMWRSKFQPIIQK 287

Query: 301 TVSLHFSVDPVGTEIM 317
           TVSLHFSVDPVGTEIM
Sbjct: 301 TVSLHFSVDPVGTEIM 287

[Close]

BLAST of Carg22210 vs. NCBI nr
Match: XP_011653184.1 (PREDICTED: uncharacterized protein LOC101221322 [Cucumis sativus] >XP_011653185.1 PREDICTED: uncharacterized protein LOC101221322 [Cucumis sativus] >XP_011653186.1 PREDICTED: uncharacterized protein LOC101221322 [Cucumis sativus] >XP_011653187.1 PREDICTED: uncharacterized protein LOC101221322 [Cucumis sativus] >XP_011653188.1 PREDICTED: uncharacterized protein LOC101221322 [Cucumis sativus] >XP_011653189.1 PREDICTED: uncharacterized protein LOC101221322 [Cucumis sativus] >XP_011653190.1 PREDICTED: uncharacterized protein LOC101221322 [Cucumis sativus] >KGN53348.1 hypothetical protein Csa_4G049070 [Cucumis sativus])

HSP 1 Score: 493.4 bits (1269), Expect = 5.6e-136
Identity = 248/316 (78.48%), Postives = 265/316 (83.86%), Query Frame = 0


Query: 1   MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60
           MLIQA+S NPH FFLP +PS S H S +VSHS  LK+P+GRR E +SRISASGEH+PT  
Sbjct: 1   MLIQAYSQNPHFFFLPSNPSISPHLSFNVSHSPKLKSPVGRRYESMSRISASGEHNPTII 60

Query: 61  SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120
            GKKRKVFEHISLLKA+ENISEEEEND+LDYLYTTQYQMRGIVAVSLGRAC QN+E YTH
Sbjct: 61  VGKKRKVFEHISLLKAKENISEEEENDMLDYLYTTQYQMRGIVAVSLGRACDQNNERYTH 120

Query: 121 GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
           GVYMRFQ KEDLEKFYVNPFY RVLNEHVMPYCHGL+HVDY+SEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQSKEDLEKFYVNPFYLRVLNEHVMPYCHGLVHVDYKSEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGILLYRIIRSETWREHQ 240
           YGVEFVLLIKF QDSFGKPLEDALNSLE+L IDNPSLIVQFTQ                 
Sbjct: 181 YGVEFVLLIKFRQDSFGKPLEDALNSLERLTIDNPSLIVQFTQ----------------- 240

Query: 241 HVVGFLCFEFISGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQK 300
                       GLNFNPSCKEFTHGVVIRFRSI AFE+FTGSS YKD+W+SKFQPIIQK
Sbjct: 241 ------------GLNFNPSCKEFTHGVVIRFRSINAFEIFTGSSQYKDIWKSKFQPIIQK 287

Query: 301 TVSLHFSVDPVGTEIM 317
           TV+LHFSVDPVGTEIM
Sbjct: 301 TVALHFSVDPVGTEIM 287

[Close]

BLAST of Carg22210 vs. TAIR10
Match: AT2G32500.1 (Stress responsive alpha-beta barrel domain protein)

HSP 1 Score: 298.5 bits (763), Expect = 4.8e-81
Identity = 158/302 (52.32%), Postives = 200/302 (66.23%), Query Frame = 0


Query: 15  LPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLL 74
           LPR P  +R F   VS+  G+     R   P     A+ +   ++ S K RKV EH+ LL
Sbjct: 8   LPR-PILTRGF---VSNGGGMFVHQCRTKTPRVTFCAADDQIASSKSNKTRKVVEHVCLL 67

Query: 75  KARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEK 134
           KA+E +SEE E D+LDYLYTTQYQMRGIVA+S+G    +N+E +TH +YMRFQ+KEDL+K
Sbjct: 68  KAKEGLSEEVEKDMLDYLYTTQYQMRGIVAISVGCIGDRNNEYFTHALYMRFQKKEDLDK 127

Query: 135 FYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQD 194
           FY NPF+ +VLNE+V P+CHGL +VDYESEVEDD+L IFRKGEE+NYG EFVLLI F + 
Sbjct: 128 FYENPFFLKVLNEYVTPFCHGLTNVDYESEVEDDILAIFRKGEEYNYGEEFVLLITFAKS 187

Query: 195 SFGKPLEDALNSLEQLAIDNPSLIVQFTQGILLYRIIRSETWREHQHVVGFLCFEFISGL 254
           +  K  +DA++S  QL    PSLIVQ TQ                             G 
Sbjct: 188 ASEKNTKDAMDSFAQLTSSLPSLIVQSTQ-----------------------------GS 247

Query: 255 NFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTE 314
           NFN S KEFTH  V+RFRS +A E+F    +YKDMWRS+F+P I+K+ +LHFSVDPVGT+
Sbjct: 248 NFNGSSKEFTHAAVVRFRSFDAMEIFFEGREYKDMWRSQFEPFIEKSEALHFSVDPVGTD 276

Query: 315 IM 317
           +M
Sbjct: 308 VM 276

[Close]

BLAST of Carg22210 vs. TrEMBL
Match: tr|A0A0A0KUW3|A0A0A0KUW3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G049070 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 3.7e-136
Identity = 248/316 (78.48%), Postives = 265/316 (83.86%), Query Frame = 0


Query: 1   MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60
           MLIQA+S NPH FFLP +PS S H S +VSHS  LK+P+GRR E +SRISASGEH+PT  
Sbjct: 1   MLIQAYSQNPHFFFLPSNPSISPHLSFNVSHSPKLKSPVGRRYESMSRISASGEHNPTII 60

Query: 61  SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120
            GKKRKVFEHISLLKA+ENISEEEEND+LDYLYTTQYQMRGIVAVSLGRAC QN+E YTH
Sbjct: 61  VGKKRKVFEHISLLKAKENISEEEENDMLDYLYTTQYQMRGIVAVSLGRACDQNNERYTH 120

Query: 121 GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
           GVYMRFQ KEDLEKFYVNPFY RVLNEHVMPYCHGL+HVDY+SEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQSKEDLEKFYVNPFYLRVLNEHVMPYCHGLVHVDYKSEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGILLYRIIRSETWREHQ 240
           YGVEFVLLIKF QDSFGKPLEDALNSLE+L IDNPSLIVQFTQ                 
Sbjct: 181 YGVEFVLLIKFRQDSFGKPLEDALNSLERLTIDNPSLIVQFTQ----------------- 240

Query: 241 HVVGFLCFEFISGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQK 300
                       GLNFNPSCKEFTHGVVIRFRSI AFE+FTGSS YKD+W+SKFQPIIQK
Sbjct: 241 ------------GLNFNPSCKEFTHGVVIRFRSINAFEIFTGSSQYKDIWKSKFQPIIQK 287

Query: 301 TVSLHFSVDPVGTEIM 317
           TV+LHFSVDPVGTEIM
Sbjct: 301 TVALHFSVDPVGTEIM 287

[Close]

BLAST of Carg22210 vs. TrEMBL
Match: tr|A0A1S4DYT7|A0A1S4DYT7_CUCME (stress-response A/B barrel domain-containing protein UP3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493150 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.0e-133
Identity = 243/316 (76.90%), Postives = 262/316 (82.91%), Query Frame = 0


Query: 1   MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60
           MLIQA+S NPH FFLP +PS S H S +VSHS  LK+P+GRR E +SRISASGEH+PT  
Sbjct: 1   MLIQAYSQNPHFFFLPPNPSISPHLSFNVSHSPKLKSPVGRRYESMSRISASGEHNPTII 60

Query: 61  SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120
            GKKRKVFEHISLLKA+ENISE+EEND+LDYLYTTQYQMRGIVAVSLGRAC QN+  YTH
Sbjct: 61  LGKKRKVFEHISLLKAKENISEDEENDMLDYLYTTQYQMRGIVAVSLGRACDQNNGRYTH 120

Query: 121 GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
           GVYMRFQ KEDLEKFYVNPFY RVLNEHVMPYCHGL+HVDYESEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQSKEDLEKFYVNPFYLRVLNEHVMPYCHGLVHVDYESEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGILLYRIIRSETWREHQ 240
           YGVEFVLLIKF QDSFGKPLEDALNSLE+L IDNPSLIVQFTQ                 
Sbjct: 181 YGVEFVLLIKFCQDSFGKPLEDALNSLERLTIDNPSLIVQFTQ----------------- 240

Query: 241 HVVGFLCFEFISGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQK 300
                       GLNFNP+CKEFTHGVVIRFRSI AFE+FT S++YKD W+SKFQPI+QK
Sbjct: 241 ------------GLNFNPTCKEFTHGVVIRFRSINAFEIFTSSTEYKDTWKSKFQPIVQK 287

Query: 301 TVSLHFSVDPVGTEIM 317
           TV LHFSVDPVGTEIM
Sbjct: 301 TVPLHFSVDPVGTEIM 287

[Close]

BLAST of Carg22210 vs. TrEMBL
Match: tr|A0A1S3BST9|A0A1S3BST9_CUCME (stress-response A/B barrel domain-containing protein UP3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493150 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 4.6e-118
Identity = 219/288 (76.04%), Postives = 236/288 (81.94%), Query Frame = 0


Query: 1   MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN 60
           MLIQA+S NPH FFLP +PS S H S +VSHS  LK+P+GRR E +SRISASGEH+PT  
Sbjct: 1   MLIQAYSQNPHFFFLPPNPSISPHLSFNVSHSPKLKSPVGRRYESMSRISASGEHNPTII 60

Query: 61  SGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTH 120
            GKKRKVFEHISLLKA+ENISE+EEND+LDYLYTTQYQMRGIVAVSLGRAC QN+  YTH
Sbjct: 61  LGKKRKVFEHISLLKAKENISEDEENDMLDYLYTTQYQMRGIVAVSLGRACDQNNGRYTH 120

Query: 121 GVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFN 180
           GVYMRFQ KEDLEKFYVNPFY RVLNEHVMPYCHGL+HVDYESEVEDDMLPIFRKGEEFN
Sbjct: 121 GVYMRFQSKEDLEKFYVNPFYLRVLNEHVMPYCHGLVHVDYESEVEDDMLPIFRKGEEFN 180

Query: 181 YGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGILLYRIIRSETWREHQ 240
           YGVEFVLLIKF QDSFGKPLEDALNSLE+L IDNPSLIVQFTQ                 
Sbjct: 181 YGVEFVLLIKFCQDSFGKPLEDALNSLERLTIDNPSLIVQFTQ----------------- 240

Query: 241 HVVGFLCFEFISGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKD 289
                       GLNFNP+CKEFTHGVVIRFRSI AFE+FT S++YKD
Sbjct: 241 ------------GLNFNPTCKEFTHGVVIRFRSINAFEIFTSSTEYKD 259

[Close]

BLAST of Carg22210 vs. TrEMBL
Match: tr|V4UEW7|V4UEW7_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016122mg PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.1e-90
Identity = 182/314 (57.96%), Postives = 221/314 (70.38%), Query Frame = 0


Query: 3   IQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSG 62
           ++ H PNP   FL  SPS S + S     +  +   + R     + + AS E S + NS 
Sbjct: 16  LKCHRPNPG--FL--SPSVSLNVS---RWNEAMSMRLSRERTVGTTVLASKEQSSSYNSE 75

Query: 63  KKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQNSESYTHGV 122
           KKRKV EHI LLKA++++SEEEEND+LDYLYT+QYQM GIVA+SLGR   +N E+YTHGV
Sbjct: 76  KKRKVVEHICLLKAKKDLSEEEENDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGV 135

Query: 123 YMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYG 182
           +MRFQRKE L KFY NPFYS+VL EHVMPYCHGL++VDYE+EVEDD+LPIFRKGE+FN+G
Sbjct: 136 FMRFQRKEQLVKFYENPFYSKVLKEHVMPYCHGLMNVDYETEVEDDILPIFRKGEDFNFG 195

Query: 183 VEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGILLYRIIRSETWREHQHV 242
           VEFVLLI F+Q +FG P EDAL SL++L  + PSLIVQ TQ                   
Sbjct: 196 VEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQ------------------- 255

Query: 243 VGFLCFEFISGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTV 302
                     G NFN S + +TH VVIR RS+EAFEMF GSSDYK+MW +KFQPII+  +
Sbjct: 256 ----------GSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMWSNKFQPIIRTQL 293

Query: 303 SLHFSVDPVGTEIM 317
            +HFSVDPVGTEIM
Sbjct: 316 PVHFSVDPVGTEIM 293

[Close]

BLAST of Carg22210 vs. TrEMBL
Match: tr|D7TW31|D7TW31_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0025g03940 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.1e-90
Identity = 187/325 (57.54%), Postives = 222/325 (68.31%), Query Frame = 0


Query: 1   MLIQAHSPNP---HVFFLPRSP------STSRHFSVHVSHSRGLKAPMGRRNEPLSRISA 60
           M IQ  + +P   H FF  R P      S+SR     +  + G+        +  +  SA
Sbjct: 5   MCIQTPTFSPSTTHCFF--RQPISSPFLSSSRKLYNVLRLNGGVNVQFSNGKKRGAIFSA 64

Query: 61  SGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRAC 120
           S   + + ++  KRKV EHI LLKA+EN+SEEEE D+LDYLYTTQYQMRGI+A++LGR  
Sbjct: 65  SVGQNSSNDTEGKRKVVEHICLLKAKENLSEEEEKDMLDYLYTTQYQMRGIIAITLGRIS 124

Query: 121 GQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLP 180
            QN E+YTH VYMRFQRKEDL KFY NPFY  VL E VMPYCHGLI+VD+ESEVEDD+LP
Sbjct: 125 DQNIENYTHAVYMRFQRKEDLGKFYENPFYLGVLRERVMPYCHGLIYVDFESEVEDDILP 184

Query: 181 IFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGILLYRII 240
           IFRKGEEFNYGVEF+LLI F +  FG P EDAL SL +L ++ PSLIVQ TQ        
Sbjct: 185 IFRKGEEFNYGVEFILLISFAKSKFGGPAEDALASLAELILEFPSLIVQSTQ-------- 244

Query: 241 RSETWREHQHVVGFLCFEFISGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWR 300
                                GLNF PS KE+THGVVIRFRSIEA E+FTGS++YKD+WR
Sbjct: 245 ---------------------GLNFCPSSKEYTHGVVIRFRSIEALELFTGSTEYKDIWR 298

Query: 301 SKFQPIIQKTVSLHFSVDPVGTEIM 317
           SKFQ I+QKT+ +HFSVDPVGTEIM
Sbjct: 305 SKFQMIVQKTLPIHFSVDPVGTEIM 298

The following BLAST results are available for this feature:

BLAST of Carg22210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931509.1	4.7e-159	90.82	stress-response A/B barrel domain-containing protein UP3 [Cucurbita moschata] >X...	[more]
XP_023552209.1	1.2e-157	90.19	stress-response A/B barrel domain-containing protein UP3 isoform X1 [Cucurbita p...	[more]
XP_022985456.1	1.1e-155	88.92	stress-response A/B barrel domain-containing protein UP3 isoform X1 [Cucurbita m...	[more]
XP_022136509.1	1.6e-138	79.75	stress-response A/B barrel domain-containing protein UP3 [Momordica charantia] >...	[more]
XP_011653184.1	5.6e-136	78.48	PREDICTED: uncharacterized protein LOC101221322 [Cucumis sativus] >XP_011653185....	[more]

BLAST of Carg22210 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G32500.1	4.8e-81	52.32	Stress responsive alpha-beta barrel domain protein	[more]

BLAST of Carg22210 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg22210 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KUW3\|A0A0A0KUW3_CUCSA	3.7e-136	78.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G049070 PE=4 SV=1	[more]
tr\|A0A1S4DYT7\|A0A1S4DYT7_CUCME	1.0e-133	76.90	stress-response A/B barrel domain-containing protein UP3 isoform X1 OS=Cucumis m...	[more]
tr\|A0A1S3BST9\|A0A1S3BST9_CUCME	4.6e-118	76.04	stress-response A/B barrel domain-containing protein UP3 isoform X2 OS=Cucumis m...	[more]
tr\|V4UEW7\|V4UEW7_9ROSI	1.1e-90	57.96	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016122mg PE=4 ...	[more]
tr\|D7TW31\|D7TW31_VITVI	1.1e-90	57.54	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0025g03940 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011008	Dimeric_a/b-barrel
IPR013097	Dabb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22210-RA	Carg22210-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013097	Stress responsive alpha-beta barrel	SMART	SM00886	Dabb_2	coord: 68..163 e-value: 2.3E-9 score: 47.1
IPR013097	Stress responsive alpha-beta barrel	PFAM	PF07876	Dabb	coord: 69..162 e-value: 5.3E-11 score: 42.9
IPR013097	Stress responsive alpha-beta barrel	PROSITE	PS51502	S_R_A_B_BARREL	coord: 183..306 score: 10.351
IPR013097	Stress responsive alpha-beta barrel	PROSITE	PS51502	S_R_A_B_BARREL	coord: 68..161 score: 20.156
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 61..163 e-value: 6.1E-13 score: 51.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..63
None	No IPR available	PANTHER	PTHR33178:SF1	SUBFAMILY NOT NAMED	coord: 243..316
None	No IPR available	PANTHER	PTHR33178:SF1	SUBFAMILY NOT NAMED	coord: 41..227
None	No IPR available	PANTHER	PTHR33178	FAMILY NOT NAMED	coord: 243..316 coord: 41..227
IPR011008	Dimeric alpha-beta barrel	SUPERFAMILY	SSF54909	Dimeric alpha+beta barrel	coord: 249..311
IPR011008	Dimeric alpha-beta barrel	SUPERFAMILY	SSF54909	Dimeric alpha+beta barrel	coord: 67..171

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22210	Csa4G049070	Cucumber (Chinese Long) v2	carcuB0617
Carg22210	MELO3C016345	Melon (DHL92) v3.5.1	carmeB0596
Carg22210	ClCG07G007980	Watermelon (Charleston Gray)	carwcgB0577
Carg22210	CSPI04G05870	Wild cucumber (PI 183967)	carcpiB0623
Carg22210	Cucsa.106890	Cucumber (Gy14) v1	carcgyB0663
Carg22210	CmaCh16G005870	Cucurbita maxima (Rimu)	carcmaB0825
Carg22210	CmoCh16G006360	Cucurbita moschata (Rifu)	carcmoB0803
Carg22210	Lsi07G008970	Bottle gourd (USVL1VR-Ls)	carlsiB535
Carg22210	Cp4.1LG14g02330	Cucurbita pepo (Zucchini)	carcpeB0838
Carg22210	CsGy4G005730	Cucumber (Gy14) v2	carcgybB0589
Carg22210	MELO3C016345.2	Melon (DHL92) v3.6.1	carmedB0603
Carg22210	CsaV3_4G006040	Cucumber (Chinese Long) v3	carcucB0624
Carg22210	Cla97C07G135140	Watermelon (97103) v2	carwmbB0618
Carg22210	Bhi01G001794	Wax gourd	carwgoB0702

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22210	Silver-seed gourd	carcarB535
Carg22210	Cucurbita maxima (Rimu)	carcmaB0826
Carg22210	Cucurbita moschata (Rifu)	carcmoB0804
Carg22210	Cucurbita pepo (Zucchini)	carcpeB0839
Carg22210	Watermelon (97103) v1	carwmB0588