CmoCh16G004590 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh16G004590
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(E3 ubiquitin-protein ligase CCNB1IP1) (6.3.2.19)
LocationCmo_Chr16 : 2203176 .. 2207831 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTGTTTCCGAGGATTTCGAGGTATAGTTGCTTCTACTTTGAATCTCACTGTAATTTTTATTTCAAGTAGTTATTGTGTGATCAGAGAGCATTTTCCAAGTTCCGATTTGATTTCGAGTGAAATGATATTTCTTGTTTCTAAGTTCCATTTTCTTTTCGGCTGCATTTGATTCACTTTCATCCAGATCTGCAGGTTAATTGTTGTTTGTTAGCTTATTAGCTCGAAATCTGGAAATTATTGTTGTTCCATTTTCCCTCGTAATATTCGGGATTTCTACCATTTCCCCACTATATTTGGGGAAATAAGTGGAGATAGAAAGCAAAGCTTGGAACTATCGATTAAATCCTGATAGCTTCCCCGTTGATTTTTTGTTTGATTGATTAAACATTTTTAGTTTACTCGTATCTTGTCCCCACTACATTAGCACCATTTATTACTTGAACTACAGAACATGAGGTAGAATCACAGGCTTTTTTTTTGTCTTCTAATTGAAGCTATGAAGGATTTTTGTGACTTTAGTGGGCCTTGCATTTCCGGCAATTGCAAATGATTTGTCCGATCTCTTCATGTTAAAAATGAAAACTGTTTGACTCCGATCTATCTTTTTGTGTGGACTGGAATTTTCGATTAATGTACGCCGAGAATAATGGAATTATGTTGGGAACAAGTACAGCTGTTGCATTCAAGTTCTTTGGCTGCTATCTCATATTTTCATTGCAAAGAGCTCGGCTTATCCTCCTGCCCATGAGAATCTTAAAACAATAATATCCGATTTAGATTATGAGTACTTGTTTGTTCACGATTGTTAGGAGGTAGGAGGGAGTCCTAGATTTGGTTAATTTAAGGAATGATCATGGGTTTATATAAAGAATAAATCTCCATTAGTATGAGGCCTTTTGAGGAAATCAAAAGCAAAGCCACGAGAGCTTATGCTCAAAATGGACAATATCATACTATTGAGGAGGTCTGCGGTTCCTAATATGTATCAGAGTCATACCCTTAACTTAACCATGACAATAGAATCCTCAAATGTCGAACGAAGAAGTTGTGAGCCTCGAAGGTGTAGTAAAAAAGTGACTTAGGTGTCGTACAAAGGGTGTACTTTGTTCGAGGGCTCCAAAGAAGGAGTCGAGCCTCGATTAAGGAGAGGCTATTCGAGGACTCCATAGGCCTCAAAGGAGAATCTATGTTATACTTTGTTCAAAGAGAGAATTGTTGAAGATTGTTGGGAGAGAGTCCCACATTGGTTACTTTAAGGAATGATATGGGGTTATAAGTAAGGAATGTTGAACACAACTCTACGTGGGAAACACTCGCACTCTTTATTACGACCAATCGAGAAGAGAATACAAGACACTTTGTATGATACTACTTTTTGTTGTTTTTGGATTGCTTGGATGAATAACCTAAGTAGGGTGGAGGGATATTTGTTGTTTTTGGATTGCTTGGATGAATAACCTAGGTAGGGTGGAGGGATATTTATACTGGACCGTACACAAGACCTAACAAATCTAAATCTAGACCTAATGAATATTTTTCTTAAAATATCTGGATCTCTTTCTACTAAAATAAATATACTGAGCTTGTACAATAATTGGGCTTGACACTATTGAACTATTTCAACAAGGAATACATCTCTAGGTATGAGACCTTTTGGGGAAACAAAAGCAAATCTGTGAAAACTTATGCTTAAAGTAAACAATGGTATTACCATGGTAACTATTGGACTATTTCAACAAGGAATACATCTCTAGGTATGAGACCTTTTGGGGAAACAAAAGCAAATCTGTGAAAACTTATGCTTAAAGTAAACAATGGTATTGCCATGGTAAAGGAAGACCTTTTGGAGAAACCAAAAGCAAAACTTTGAGAACTTATGCTTAAAGTAAACAATATCATACCATTGTGAAGGTCCGCGGTTCCTAACATTGTTTTCATCAAAATCCAATCAGTTCAGGATGTTACTGGTTCTATTACTTCCATTCACGAGGAATTTCTGTCCTTTTATACATGGCTGTAGAACCTGTAAAGAACTGCTGTTCGCAGAATTTTTGGACTAAATGAGAAAATTTGTTGCAGTTCGGTATGAAAAAACTGAAGTATCATTATATCCATCACTTCGACGTTAGTGCTTCGTGTTAAGATAAAATCACTAGAGTTCTTATAGCAAGTAGAACTTTGTCTTTGTGGATAGGGTGGAAGCATTAAGTGGAAGCCATCCACTGATATCCTCTTACTATGAAAAGTGCTTCTGGTATTCACATTTATAAACATCATGCATAATTTGCAGTCTTCAAAATTATTGATGGTGGTCTGATTTTTATTTGATTTCTGACTCATAGTGAACAATGAAAGCTTGGATCGCTGATATTTTCTCAACTTGGATTAACGTAACTTGCAATTTTTCTTCTTTCAATTTTGATCGACTGAGGAGAGGGAACTGACTAACTAAAACGACTGTCACAGTAACATTTCAAATACTAAGGCATCTTTTACGTGGTTAAGATTTTCACTACAGGGTCTACGATTTCCTTAGCATTCCATGGAATTAGAGGTTACTTCTGAAGGTTCATTATGAAATGCAATGCTTGCTGGAGGGAACTTGAAGGGCGAGCTATCTCCACAACTTGTGGTCACCTGTTGTGTATCCTAAGCTCGTAAAAAATTTCATTTCTATTGTTTAATTTTGTGAAATATTTGACCTATTATTAGTATTAAGTGTAAGAGGTCTTGTTGGATAAATTGTTCCTCAACGGTGTAAAGGCACAGAAGATGCAAGCAAGATCCTTAGCAATGATGGAGCATGCCCCATTCGTGATCGAGTTCTTTCTAAAAGGTGAAGGCTTTGTTATTATGAAGTTACGTACGTTTTCTGTTTGGCAGCCTCATGAAACCTGTGGATATCAATCCAAACGATGAATGGGTCAATGTAAGTGTTTTCTTAAAAGGATTGTATTTAGCTTGCTTAAGTCGTTTAGACTCTTCTAGCGTTTCTCAACCTTTTCCTTGTGTATTACTTTAATGCTGGCACTCACTACACACAATATTGCAGATGGTTGGCCGGTATATCTCCTCAGATATGTATCCTTTAGAATGAATAATGATCATTAATGATCCAAAATTATAATAATTAATGATAAATTAACCTCCTAGCTCTGGAAAATACTGCCTTTCCATTTATTCCAGCGATTGAAGAGGTAATTGTGAGATCCCATCTCAATTGGAGAGGAAGCGAAGCATTTCTTATAAGGGTGTGAAACCTCTCCCTAACGTACACATTTTAAAACTGTGAGGAGATTTGTTTATCGTAACAATATGAATGTTGCTCATTTTCCTTGATCTGTCCAAGTGATGAGAAGTGCATATAGAAGTGTAATGTTTTATATTGGACAAAAGGAACTGGAGATGCAGTACAAGATGAACAGAATCGTGGCTCAATGCCGACAGAAATGTGAGGTTATACAAGCAAAGTTCACCGAGAAACTGGAGCAGGTGCATGCTGCATACCAAAAAATGGCCAAAAGATGCCAGATGATGGAGCGAGAAATGGAGAATTTATCCAAAGACAAACAAGAGCTACAGGAGAAGTTTGCTGAAAAATCCAGGTCGGTCATCTCCTTTCATTTATGCCTCCGACTTGTTAATTTCTGTTTTTAAGATCCTGATTTGTTCTTAAACCCTGTTAATATGATGGATAACAGAGAAACCACGAGGAAAGGTAAGCTTTTTCTCTTTCTAATTTTAAACAAGTCTTTCCACAGTGGGTATTGTTGAGTTGAATTGAGAAGGGATCATATGGTTAGGATTCACGATCCTCCACGGTGGTATGATGGCTTTACTTTTGGCTTCTCCAAAAGGTCTCATATCAATGGAGATATATTCCTTACTCATAACCTCATGATCAACCCTTTAATTAGCCAACGTGGGACTCTCTCCCAACAATTCTCAACAATCATTCCCTCGGACAAAATACATTGTAGAGCCTCTTTTGAGGCTTATGGAGTCCTCGAACAGCCTCCCCTTAATCAAGGTTCGACTCTTTCTCTGGAGCCCTCAAACAAAGTACAATCTTTGTTTGACACTTAAGTCACTTTTGTCTACACTTTCGAGAGTCCCAACTTCTTTGTTCGACATTTGAGGATTCTATTAACATGGCTAAGTTAAGGGCATGCCTCTAATACCATGTTAGGAATCACGATCCTTCACAATGGTATGATATTGTCCACTTTGAGCATGAGCTCTCGCGGCTTTGCTTTTGGCTTCCCCAAAGGCCTCATACCAATGGAGATATATTCTTTACTTATAAATCCATGATCTACCTCTTAATGGGACTCCCTCCCAACAAAACACGACAAAAAAACACGACAAAAATAAATCCAAATCATGCTTCTCTGTTCTAGTATTTTTCCAAAACAAGTTGACTTATTTTCTTGTAGACTGGCTGGTTTCCGCTCCTGAAACTCCAGGGCCAAGAGAGGACATATGGCCGGCAAAACAAGCTGCTCCAATGGCAATGGAAGCTGGGAACAGAGGAGCTGGAGCTCACTCCGCGTCTGGAAGTGGAGCTGGCAACCCCTCCATGACTCTACGCAACTTCATTTTGTCCCCAATCAAACGACCTCAGCTCTCTCGTCGCCCTCAAATGTTCACGTAA

mRNA sequence

ATTTGTTTCCGAGGATTTCGAGGGTCTACGATTTCCTTAGCATTCCATGGAATTAGAGGTTACTTCTGAAGGTTCATTATGAAATGCAATGCTTGCTGGAGGGAACTTGAAGGGCGAGCTATCTCCACAACTTGTGGTCACCTGTTGTGCACAGAAGATGCAAGCAAGATCCTTAGCAATGATGGAGCATGCCCCATTCGTGATCGAGTTCTTTCTAAAAGGTGAAGGCTTTGTTATTATGAAGTTACGTACGTTTTCTGTTTGGCAGCCTCATGAAACCTGTGGATATCAATCCAAACGATGAATGGGTCAATATGGTTGGCCGGTATATCTCCTCAGATATTGATGAGAAGTGCATATAGAAGTGTAATGTTTTATATTGGACAAAAGGAACTGGAGATGCAGTACAAGATGAACAGAATCGTGGCTCAATGCCGACAGAAATGTGAGGTTATACAAGCAAAGTTCACCGAGAAACTGGAGCAGGTGCATGCTGCATACCAAAAAATGGCCAAAAGATGCCAGATGATGGAGCGAGAAATGGAGAATTTATCCAAAGACAAACAAGAGCTACAGGAGAAGTTTGCTGAAAAATCCAGAGAAACCACGAGGAAAGACTGGCTGGTTTCCGCTCCTGAAACTCCAGGGCCAAGAGAGGACATATGGCCGGCAAAACAAGCTGCTCCAATGGCAATGGAAGCTGGGAACAGAGGAGCTGGAGCTCACTCCGCGTCTGGAAGTGGAGCTGGCAACCCCTCCATGACTCTACGCAACTTCATTTTGTCCCCAATCAAACGACCTCAGCTCTCTCGTCGCCCTCAAATGTTCACGTAA

Coding sequence (CDS)

ATGAATGGGTCAATATGGTTGGCCGGTATATCTCCTCAGATATTGATGAGAAGTGCATATAGAAGTGTAATGTTTTATATTGGACAAAAGGAACTGGAGATGCAGTACAAGATGAACAGAATCGTGGCTCAATGCCGACAGAAATGTGAGGTTATACAAGCAAAGTTCACCGAGAAACTGGAGCAGGTGCATGCTGCATACCAAAAAATGGCCAAAAGATGCCAGATGATGGAGCGAGAAATGGAGAATTTATCCAAAGACAAACAAGAGCTACAGGAGAAGTTTGCTGAAAAATCCAGAGAAACCACGAGGAAAGACTGGCTGGTTTCCGCTCCTGAAACTCCAGGGCCAAGAGAGGACATATGGCCGGCAAAACAAGCTGCTCCAATGGCAATGGAAGCTGGGAACAGAGGAGCTGGAGCTCACTCCGCGTCTGGAAGTGGAGCTGGCAACCCCTCCATGACTCTACGCAACTTCATTTTGTCCCCAATCAAACGACCTCAGCTCTCTCGTCGCCCTCAAATGTTCACGTAA
Homology
[Close]
BLAST of CmoCh16G004590 vs. Swiss-Prot
Match: HEI10_ORYSJ (E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Oryza sativa subsp. japonica GN=HEI10 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.4e-39
Identity = 88/128 (68.75%), Postives = 104/128 (81.25%), Query Frame = 1 

Query: 7   LAGISPQILMRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQAKFTEKLEQVHAA 66
           +AG+SPQILM+SAYRSVMFYIGQKELEMQYKMNRIV QCRQKCE++QAKFTEKLE+VH A
Sbjct: 66  MAGVSPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCELMQAKFTEKLEEVHTA 125

Query: 67  YQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRETTRKDWL---VSAPETPGPREDIWP 126
           YQKMAK+CQ+ME+E+ENLS+DKQELQEKFAEKSR+  + D +   + +      R  I P
Sbjct: 126 YQKMAKKCQLMEQEVENLSRDKQELQEKFAEKSRQKRKLDEMYDQLRSEYESAKRSAIQP 185

Query: 127 AKQAAPMA 132
           A    P A
Sbjct: 186 ANNYFPRA 193

[Close]
BLAST of CmoCh16G004590 vs. Swiss-Prot
Match: HEI10_ARATH (E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Arabidopsis thaliana GN=HEI10 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.3e-37
Identity = 79/100 (79.00%), Postives = 93/100 (93.00%), Query Frame = 1 

Query: 7   LAGISPQILMRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQAKFTEKLEQVHAA 66
           +AGISPQILM+SAYRSVMFYI Q++LEMQYKMNR+VAQCRQKCE +QAKF+EK+EQVH A
Sbjct: 66  MAGISPQILMKSAYRSVMFYIAQRDLEMQYKMNRVVAQCRQKCEGMQAKFSEKMEQVHTA 125

Query: 67  YQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRETTRKD 107
           YQKM KRCQMME+E+ENL+KDKQELQEKF+EKSR+  + D
Sbjct: 126 YQKMGKRCQMMEQEVENLTKDKQELQEKFSEKSRQKRKLD 165

[Close]
BLAST of CmoCh16G004590 vs. TrEMBL
Match: A0A151TPQ5_CAJCA (E3 ubiquitin-protein ligase CCNB1IP1 OS=Cajanus cajan GN=KK1_022650 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.3e-51
Identity = 129/239 (53.97%), Postives = 151/239 (63.18%), Query Frame = 1 

Query: 7   LAGISPQILMRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQAKFTEKLEQVHAA 66
           +AG+SPQILM+SAYRSVMFYIGQKELEMQ+KMN++VAQCRQKCE++Q KFTEKLEQVH A
Sbjct: 66  MAGVSPQILMKSAYRSVMFYIGQKELEMQFKMNKLVAQCRQKCEMMQEKFTEKLEQVHTA 125

Query: 67  YQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRETTRKDWLVS---------------- 126
           YQKMAK+CQMM++E+E+L+KD QELQEKFAEKSR+  + D +                  
Sbjct: 126 YQKMAKKCQMMQQEIESLTKDNQELQEKFAEKSRQKRKLDEMYDQLRNEYDSVKRSAIQP 185

Query: 127 ---------------------------------APETPGPREDIWPAKQ----------- 178
                                             P TPGPRED+WPA+Q           
Sbjct: 186 TSNFYSRNEPDLFSNPPNIMDDREIGRKGRSVLTPATPGPREDVWPARQNSNNSGHFDLS 245

[Close]
BLAST of CmoCh16G004590 vs. TrEMBL
Match: A0A0B2P4M6_GLYSO (E3 ubiquitin-protein ligase CCNB1IP1 OS=Glycine soja GN=glysoja_048291 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.2e-50
Identity = 126/239 (52.72%), Postives = 149/239 (62.34%), Query Frame = 1 

Query: 7   LAGISPQILMRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQAKFTEKLEQVHAA 66
           +AG+SPQILM+SAYRSVMFY+GQKELEMQ+KMN+IVAQCRQKCE++Q KFTEK+EQVH A
Sbjct: 66  MAGVSPQILMKSAYRSVMFYLGQKELEMQFKMNKIVAQCRQKCEMMQEKFTEKIEQVHTA 125

Query: 67  YQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRETTRKDWLVS---------------- 126
           YQKMAK+CQMM++E+E+L+KD QELQEKFAEKSR+  + D +                  
Sbjct: 126 YQKMAKKCQMMQQEIESLTKDNQELQEKFAEKSRQKRKLDEMYDQLRNEYDSVKRSAIQP 185

Query: 127 ---------------------------------APETPGPREDIWPAKQ----------- 178
                                             P TPGPRED+WPA+Q           
Sbjct: 186 ADNFYSRNEHDLFSNPPNIMDGREMGRKGGLVFTPATPGPREDVWPARQNSNNSGHFDLS 245

[Close]
BLAST of CmoCh16G004590 vs. TrEMBL
Match: A0A0R0GDN5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G209600 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.2e-50
Identity = 126/239 (52.72%), Postives = 149/239 (62.34%), Query Frame = 1 

Query: 7   LAGISPQILMRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQAKFTEKLEQVHAA 66
           +AG+SPQILM+SAYRSVMFY+GQKELEMQ+KMN+IVAQCRQKCE++Q KFTEK+EQVH A
Sbjct: 66  MAGVSPQILMKSAYRSVMFYLGQKELEMQFKMNKIVAQCRQKCEMMQEKFTEKIEQVHTA 125

Query: 67  YQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRETTRKDWLVS---------------- 126
           YQKMAK+CQMM++E+E+L+KD QELQEKFAEKSR+  + D +                  
Sbjct: 126 YQKMAKKCQMMQQEIESLTKDNQELQEKFAEKSRQKRKLDEMYDQLRNEYDSVKRSAIQP 185

Query: 127 ---------------------------------APETPGPREDIWPAKQ----------- 178
                                             P TPGPRED+WPA+Q           
Sbjct: 186 ADNFYSRNEHDLFSNPPNIMDGREMGRKGGLVFTPATPGPREDVWPARQNSNNSGHFDLS 245

[Close]
BLAST of CmoCh16G004590 vs. TrEMBL
Match: A0A061F8Z0_THECC (RING/U-box superfamily protein isoform 5 OS=Theobroma cacao GN=TCM_032113 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 6.1e-50
Identity = 123/229 (53.71%), Postives = 146/229 (63.76%), Query Frame = 1 

Query: 7   LAGISPQILMRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQAKFTEKLEQVHAA 66
           +AG+SPQILM+S+YRSVMFYIGQKELEMQYKMNRIVAQCRQKCE +Q KF+EKLEQVH A
Sbjct: 66  MAGVSPQILMKSSYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEAMQEKFSEKLEQVHTA 125

Query: 67  YQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRETTRKDWLVSAPETP----------- 126
           YQKMAKRCQMME+E+E+LSKDKQELQEKF+EKSR+  + D +     +            
Sbjct: 126 YQKMAKRCQMMEQEIESLSKDKQELQEKFSEKSRQKRKLDEMYDQLRSDYESMKRSAIQP 185

Query: 127 -----------------------------GPREDIWPAKQ-----------------AAP 178
                                        GPRED+WPA+Q                  A 
Sbjct: 186 SNNFYVRNEADLFSNPATNMVDGRDPIRRGPREDVWPARQNSSNSGHFDISGGSPAKQAA 245

[Close]
BLAST of CmoCh16G004590 vs. TrEMBL
Match: A0A061F817_THECC (RING/U-box superfamily protein isoform 4 OS=Theobroma cacao GN=TCM_032113 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 6.1e-50
Identity = 123/229 (53.71%), Postives = 146/229 (63.76%), Query Frame = 1 

Query: 7   LAGISPQILMRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQAKFTEKLEQVHAA 66
           +AG+SPQILM+S+YRSVMFYIGQKELEMQYKMNRIVAQCRQKCE +Q KF+EKLEQVH A
Sbjct: 66  MAGVSPQILMKSSYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEAMQEKFSEKLEQVHTA 125

Query: 67  YQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRETTRKDWLVSAPETP----------- 126
           YQKMAKRCQMME+E+E+LSKDKQELQEKF+EKSR+  + D +     +            
Sbjct: 126 YQKMAKRCQMMEQEIESLSKDKQELQEKFSEKSRQKRKLDEMYDQLRSDYESMKRSAIQP 185

Query: 127 -----------------------------GPREDIWPAKQ-----------------AAP 178
                                        GPRED+WPA+Q                  A 
Sbjct: 186 SNNFYVRNEADLFSNPATNMVDGRDPIRRGPREDVWPARQNSSNSGHFDISGGSPAKQAA 245

[Close]
BLAST of CmoCh16G004590 vs. TAIR10
Match: AT1G53490.1 (AT1G53490.1 RING/U-box superfamily protein)

HSP 1 Score: 156.8 bits (395), Expect = 1.3e-38
Identity = 79/100 (79.00%), Postives = 93/100 (93.00%), Query Frame = 1 

Query: 7   LAGISPQILMRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQAKFTEKLEQVHAA 66
           +AGISPQILM+SAYRSVMFYI Q++LEMQYKMNR+VAQCRQKCE +QAKF+EK+EQVH A
Sbjct: 66  MAGISPQILMKSAYRSVMFYIAQRDLEMQYKMNRVVAQCRQKCEGMQAKFSEKMEQVHTA 125

Query: 67  YQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRETTRKD 107
           YQKM KRCQMME+E+ENL+KDKQELQEKF+EKSR+  + D
Sbjct: 126 YQKMGKRCQMMEQEVENLTKDKQELQEKFSEKSRQKRKLD 165

[Close]
BLAST of CmoCh16G004590 vs. NCBI nr
Match: gi|659101683|ref|XP_008451737.1| (PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 [Cucumis melo])

HSP 1 Score: 245.0 bits (624), Expect = 1.0e-61
Identity = 146/228 (64.04%), Postives = 157/228 (68.86%), Query Frame = 1 

Query: 7   LAGISPQILMRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQAKFTEKLEQVHAA 66
           +AGISPQ LM+SAYRSVMFY+GQKELEMQYKMNR++AQCRQKCEV+Q KFTEKLEQVH+A
Sbjct: 66  MAGISPQTLMKSAYRSVMFYVGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHSA 125

Query: 67  YQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRETTRKDW------------------- 126
           YQKMAKRCQMMEREMENLSKDKQELQEKFAEKSR+  + D                    
Sbjct: 126 YQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQP 185

Query: 127 -----------LVSAPET---------PGPREDIW------------------PAKQAAP 178
                      L S P            GPRE+IW                  PAKQAAP
Sbjct: 186 VTNFYTRNEPDLFSNPVNLMDNREAMRKGPREEIWPTRQNSGNSGHFDLSVGSPAKQAAP 245

[Close]
BLAST of CmoCh16G004590 vs. NCBI nr
Match: gi|659101685|ref|XP_008451738.1| (PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 [Cucumis melo])

HSP 1 Score: 245.0 bits (624), Expect = 1.0e-61
Identity = 146/228 (64.04%), Postives = 157/228 (68.86%), Query Frame = 1 

Query: 7   LAGISPQILMRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQAKFTEKLEQVHAA 66
           +AGISPQ LM+SAYRSVMFY+GQKELEMQYKMNR++AQCRQKCEV+Q KFTEKLEQVH+A
Sbjct: 66  MAGISPQTLMKSAYRSVMFYVGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHSA 125

Query: 67  YQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRETTRKDW------------------- 126
           YQKMAKRCQMMEREMENLSKDKQELQEKFAEKSR+  + D                    
Sbjct: 126 YQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQP 185

Query: 127 -----------LVSAPET---------PGPREDIW------------------PAKQAAP 178
                      L S P            GPRE+IW                  PAKQAAP
Sbjct: 186 VTNFYTRNEPDLFSNPVNLMDNREAMRKGPREEIWPTRQNSGNSGHFDLSVGSPAKQAAP 245

[Close]
BLAST of CmoCh16G004590 vs. NCBI nr
Match: gi|743902483|ref|XP_011044580.1| (PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 [Populus euphratica])

HSP 1 Score: 209.1 bits (531), Expect = 6.1e-51
Identity = 128/232 (55.17%), Postives = 149/232 (64.22%), Query Frame = 1 

Query: 4   SIWLAGISPQILMRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQAKFTEKLEQV 63
           S+ +AGISPQILM+SAYRSVMF+ GQ+ELEMQYKMNRIVAQCRQKCE +Q KFTEKLEQ+
Sbjct: 63  SMAMAGISPQILMKSAYRSVMFFTGQRELEMQYKMNRIVAQCRQKCESMQEKFTEKLEQL 122

Query: 64  HAAYQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRETTRKDWLVSA------------ 123
           HAAYQKMAKRC MME+E+E+LSKDKQELQEKF+EK+R+  + D +               
Sbjct: 123 HAAYQKMAKRCHMMEQEIESLSKDKQELQEKFSEKARQKRKLDEMYDQLRSEYESNKRSA 182

Query: 124 ----------------------------PETPGPREDIWPAKQ----------------- 178
                                       P   GPREDIWPA+Q                 
Sbjct: 183 IQPANNFFSRNEPDLFSNPAATMMDNRDPIRKGPREDIWPARQNSSNSGPFEIRGGSPAN 242

[Close]
BLAST of CmoCh16G004590 vs. NCBI nr
Match: gi|1012357815|gb|KYP69000.1| (E3 ubiquitin-protein ligase CCNB1IP1 [Cajanus cajan])

HSP 1 Score: 209.1 bits (531), Expect = 6.1e-51
Identity = 129/239 (53.97%), Postives = 151/239 (63.18%), Query Frame = 1 

Query: 7   LAGISPQILMRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQAKFTEKLEQVHAA 66
           +AG+SPQILM+SAYRSVMFYIGQKELEMQ+KMN++VAQCRQKCE++Q KFTEKLEQVH A
Sbjct: 66  MAGVSPQILMKSAYRSVMFYIGQKELEMQFKMNKLVAQCRQKCEMMQEKFTEKLEQVHTA 125

Query: 67  YQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRETTRKDWLVS---------------- 126
           YQKMAK+CQMM++E+E+L+KD QELQEKFAEKSR+  + D +                  
Sbjct: 126 YQKMAKKCQMMQQEIESLTKDNQELQEKFAEKSRQKRKLDEMYDQLRNEYDSVKRSAIQP 185

Query: 127 ---------------------------------APETPGPREDIWPAKQ----------- 178
                                             P TPGPRED+WPA+Q           
Sbjct: 186 TSNFYSRNEPDLFSNPPNIMDDREIGRKGRSVLTPATPGPREDVWPARQNSNNSGHFDLS 245

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BLAST of CmoCh16G004590 vs. NCBI nr
Match: gi|743902485|ref|XP_011044581.1| (PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 [Populus euphratica])

HSP 1 Score: 209.1 bits (531), Expect = 6.1e-51
Identity = 128/232 (55.17%), Postives = 149/232 (64.22%), Query Frame = 1 

Query: 4   SIWLAGISPQILMRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQAKFTEKLEQV 63
           S+ +AGISPQILM+SAYRSVMF+ GQ+ELEMQYKMNRIVAQCRQKCE +Q KFTEKLEQ+
Sbjct: 63  SMAMAGISPQILMKSAYRSVMFFTGQRELEMQYKMNRIVAQCRQKCESMQEKFTEKLEQL 122

Query: 64  HAAYQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRETTRKDWLVSA------------ 123
           HAAYQKMAKRC MME+E+E+LSKDKQELQEKF+EK+R+  + D +               
Sbjct: 123 HAAYQKMAKRCHMMEQEIESLSKDKQELQEKFSEKARQKRKLDEMYDQLRSEYESNKRSA 182

Query: 124 ----------------------------PETPGPREDIWPAKQ----------------- 178
                                       P   GPREDIWPA+Q                 
Sbjct: 183 IQPANNFFSRNEPDLFSNPAATMMDNRDPIRKGPREDIWPARQNSSNSGPFEIRGGSPAN 242

The following BLAST results are available for this feature:
BLAST of CmoCh16G004590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HEI10_ORYSJ5.4e-3968.75E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Oryza sativa subsp. japonica GN=... [more]
HEI10_ARATH2.3e-3779.00E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Arabidopsis thaliana GN=HEI10 PE... [more]
BLAST of CmoCh16G004590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A151TPQ5_CAJCA4.3e-5153.97E3 ubiquitin-protein ligase CCNB1IP1 OS=Cajanus cajan GN=KK1_022650 PE=4 SV=1[more]
A0A0B2P4M6_GLYSO1.2e-5052.72E3 ubiquitin-protein ligase CCNB1IP1 OS=Glycine soja GN=glysoja_048291 PE=4 SV=1[more]
A0A0R0GDN5_SOYBN1.2e-5052.72Uncharacterized protein OS=Glycine max GN=GLYMA_15G209600 PE=4 SV=1[more]
A0A061F8Z0_THECC6.1e-5053.71RING/U-box superfamily protein isoform 5 OS=Theobroma cacao GN=TCM_032113 PE=4 S... [more]
A0A061F817_THECC6.1e-5053.71RING/U-box superfamily protein isoform 4 OS=Theobroma cacao GN=TCM_032113 PE=4 S... [more]
BLAST of CmoCh16G004590 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G53490.11.3e-3879.00 RING/U-box superfamily protein[more]
BLAST of CmoCh16G004590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659101683|ref|XP_008451737.1|1.0e-6164.04PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 [Cucumis melo... [more]
gi|659101685|ref|XP_008451738.1|1.0e-6164.04PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 [Cucumis melo... [more]
gi|743902483|ref|XP_011044580.1|6.1e-5155.17PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 [Populus euph... [more]
gi|1012357815|gb|KYP69000.1|6.1e-5153.97E3 ubiquitin-protein ligase CCNB1IP1 [Cajanus cajan][more]
gi|743902485|ref|XP_011044581.1|6.1e-5155.17PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 [Populus euph... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0051026 chiasma assembly
biological_process GO:0007126 meiotic nuclear division
biological_process GO:0035825 reciprocal DNA recombination
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005694 chromosome
molecular_function GO:0003674 molecular_function
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G004590.1CmoCh16G004590.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 60..101
scor
NoneNo IPR availablePANTHERPTHR23041RING FINGER DOMAIN-CONTAININGcoord: 7..101
score: 5.9
NoneNo IPR availablePANTHERPTHR23041:SF65E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOGcoord: 7..101
score: 5.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh16G004590Cucsa.273620Cucumber (Gy14) v1cgycmoB0750
CmoCh16G004590CmaCh16G004270Cucurbita maxima (Rimu)cmacmoB322
CmoCh16G004590CmaCh04G006570Cucurbita maxima (Rimu)cmacmoB703
CmoCh16G004590Cla002445Watermelon (97103) v1cmowmB305
CmoCh16G004590Csa4G083540Cucumber (Chinese Long) v2cmocuB325
CmoCh16G004590MELO3C016116Melon (DHL92) v3.5.1cmomeB294
CmoCh16G004590ClCG07G010130Watermelon (Charleston Gray)cmowcgB293
CmoCh16G004590CSPI04G07980Wild cucumber (PI 183967)cmocpiB332
CmoCh16G004590Lsi07G002890Bottle gourd (USVL1VR-Ls)cmolsiB318
CmoCh16G004590Cp4.1LG14g03620Cucurbita pepo (Zucchini)cmocpeB307
CmoCh16G004590Cp4.1LG01g00680Cucurbita pepo (Zucchini)cmocpeB315
CmoCh16G004590MELO3C016116.2Melon (DHL92) v3.6.1cmomedB337
CmoCh16G004590CsaV3_4G008200Cucumber (Chinese Long) v3cmocucB0388
CmoCh16G004590Cla97C07G136810Watermelon (97103) v2cmowmbB335
CmoCh16G004590Bhi01G002496Wax gourdcmowgoB0433
CmoCh16G004590CsGy4G007850Cucumber (Gy14) v2cgybcmoB467
CmoCh16G004590Carg11358Silver-seed gourdcarcmoB0898
CmoCh16G004590Carg13095Silver-seed gourdcarcmoB0057
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh16G004590CmoCh04G007060Cucurbita moschata (Rifu)cmocmoB288
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh16G004590Cucumber (Gy14) v2cgybcmoB470
CmoCh16G004590Silver-seed gourdcarcmoB0054
CmoCh16G004590Silver-seed gourdcarcmoB0055
CmoCh16G004590Cucumber (Chinese Long) v3cmocucB0393
CmoCh16G004590Wax gourdcmowgoB0448
CmoCh16G004590Cucurbita moschata (Rifu)cmocmoB286
CmoCh16G004590Cucurbita moschata (Rifu)cmocmoB287
CmoCh16G004590Cucurbita maxima (Rimu)cmacmoB701
CmoCh16G004590Cucurbita maxima (Rimu)cmacmoB702
CmoCh16G004590Cucurbita pepo (Zucchini)cmocpeB311
CmoCh16G004590Cucurbita pepo (Zucchini)cmocpeB314
CmoCh16G004590Bottle gourd (USVL1VR-Ls)cmolsiB299