CmaCh16G004270 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G004270
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionE3 ubiquitin-protein ligase CCNB1IP1
LocationCma_Chr16 : 2131766 .. 2134841 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATGCAATGCTTGCTGGAGGGAACTTGAAGGGCGAGCTATCTCCACAACTTGTGGTCACCTGTTGTGTATCCTAAGATCGTAAAAAATTTCATTTTCTATTGTTTAATTTTGTGAAATATGTGACCTATTATTAGTAGTACATGTAAGAGGTCTTGTTGGATAAATTGTTCCTTAACGGTGTAAAGGCATAGAAGATGCAAGCAAGATCCTTACCAATGATGGAGCATGCCCCATTCGTGATCAAGTTCTTTCTAAAAGGTAAAGGCTTTGTTATTATGACGCTTTCAAGTCTCAGCAATGCTGAAGTTTCGTACTCTTTAAACAAGGTTTGCATTAGTTCCCAGTGCACAATTGAAGAAAAAATGGATAACGAGTATGTAAGAAATGTCTTAGAGGACCCATCAGCAGATCAATCCTTCATATCAACTTCTTAGAAAATTGTATTATCGCCATTTAGACAACTATTTTTCCACGGGTTTACTGATTCATTGATCACATGGTTTAATTTTCTCTTACGTACGGTTTCTGTTTGGCAGCCTCATGAAACCTGTGGATATCAATCCAAACGATGAATGGGTCAATGTAAGTGTTTCCTTAAAAGGATTGTATTTAGCTTGGTCAAGTCGTTTAGACTCTTCTAGCGTTTCTCAACCTTTTCCTTGTGTATTACTTTAATGCTGGCACTCACTGCACAAAATATTGCAGGTGGTTGGCCGGTATATCTCCTCAGATATGTATCCTTAAGAATGAATAATGATCATTAATGATCCAAAATTATAATAATTAATGATAAATTAATCTCGAAGTTCTATAAAATACTTCCTTTCCATTTATTCCAGCGACTAAGGAGGTAATTGTGAGATCTCACCTTCGTTGGAGAGGAAATGAAGTATTTCTTATAGGGTGTGAAACCTCTCCCTAACAGACGTATTTTAAAACCGTGAAGTTGACGACAATACGTAACAGGTCAAAATGGATAGTATCTCTAAAGAGATTTGTTTTTGGTAACAATATGAATGTTGCTAATTTTCCTTGATTGGTCCAAGTGATGAAAAGTGCATATAGAAGTGTAATGTTCTATATTGGACAAAAGGAACTGGAGATGCAGTACAAGATGAACAGAATCGTGGCTCAATGCCGACAGAAATGTGAGGTTATACAAGAAAAGTTCACCGAGAAACTGGAGCAGGTGCATGCTGCATACCAAAAAATGGCCAAAAGATGCCAGATGATGGAGCGAGAAATGGAGAATTTATCCAAAGACAAACAAGAGCTACAGGAGAAGTTTGCTGATAACTCCAGGTCATCTCCTTTCATTTTTGCCTCCCACTTGTTAACTTCTGTTTTTAAGATCCTGATCCAGAAAATTCAATTGCATGTTAGGCAGAAGAGAAAACTAGATGAAATGTATGATCAATTGAAACATGAACATGAATCATTAAAACGTTCGGCGATCCAGCCCGTGAGCAATTTTATACAAGAAACGAGCCTGATTTGTTCTTAAACCCTGTTAATATGATGGATAACAGAGAAACCACGAGGAAAGGTAAGCTTTTTCCCTTTCTAATTTTAAATAAGGAAACCTTTCCACAATGGATATTGTTGAGTTGAATTGAGAAGAGATCAGATGGTTAGGATTCACGACCCTCCACGGTGGTAATGATGGCTTTGCTTTTGGCTTCCCCAAAAGACCTCATATCAATGGAGATATATTCTTTACTTATAAACTCATGAACAACCCCTTAATTGGTCATTGTGGGACTCTCTCTCAACAATTCTCTCATCGAACAAAATACATTATAGAGCCTCTTCTGAGGTCTATAAAGTCCTCAGACAGCCTCCCCTTAATCGAGGCTCGACTCTTTCTTGGGAGCCTTCAAACAAAGAGTTCTTTGTTAGACACTTCAGTCACTTTTGACTACACTTTCGAGGGTCTCAACTTCTTTGTTCGACATTTGAGGATTCTATTAACATGGCTAAGTTAAGGGCATGCTTCTGATATCATGTTAGGAATCACGACCCTCCACAATGGTATGATATTGTCCACTTTGAGCATGAGCTCTCGTGGCTTTGCTTTTGGCTTCTCAAAAGGCCTCATATCAATGGAGATATATTCCTTATTTATAAACTCATGATCAACCCCTTAATTAGTCAATGTGGGACTCTCTCTCAACAATCCTCTCTTCGAACAAAATACACTATAGAGCCTCTTCTGAGGCCTATGGAGTCCTCGAACAGCCTCCCCTTAATCGAAGTTCGACTCTTTCTCGGGAGCCTTCAAACAAAATACACTCTTTATTTGACACTTGAGTCACTTTTGACTACACTTTCGAGGGTCTCAACTTCTTTGTTCGACATTTGAGAATTCTATTAACATGACTAAGTTAAGGCATGCTTTTGATACCATGTTAGGAATCATGACCCTCCACAATGGTATGATATTGTTCACTTTGAACATGAGCTCTTGTGACTTTGCTTTTGGCTTCCCAAAAATTCCTCATACCAATGGAAATATATTCTTTACTTATAAACCTATAATCAACCCCTTAATTAACTAAGGTGGATTTCCTCCCGACCATCCTCGACACAAATAAATCCAAATCATGCTTCTCCGTTTTGAGTATTTTTCCAAAACAAGTTGACTTATTTCTTGCAGACTGGCTGGTTTCCGCTCCTGAAACTCTAGGGCCAAGAGAAGAAATATGGCCGGCAAGACAAAACAGTGGGAACTCTAGTCACTTCGACATCTCCGTTGGATCACCGGCACAACAAGCTGCTCCAATGGCAATGGAAGCTGGGATCAGAAGAGCTGGAGCTCACTCTCTGCGTCTGGAAGTGGAGCTGGCAACCCCTCCATTTCTCTACGCAACTTCATTTTGTCCCCAATCAAACGACCACAGCTCTCTCGTCGCCCTCAAATGTTCACGTAAGTAATATCAATCGCTTGCTCACATGAAAATGAAATTTAAGCTCAAAACTTCGTTAAAAATATTCTCATTGTAGATTGTGAGATGGAAGCTAGTGAGGTGACATTTGGTGGCCAAAAGGGCAGATCAATTCGCTGGCTTTAA

mRNA sequence

ATGAAATGCAATGCTTGCTGGAGGGAACTTGAAGGGCGAGCTATCTCCACAACTTGTGGTCACCTGTTGTGCATAGAAGATGCAAGCAAGATCCTTACCAATGATGGAGCATGCCCCATTCGTGATCAAGTTCTTTCTAAAAGCCTCATGAAACCTGTGGATATCAATCCAAACGATGAATGGGTCAATGTAAGTGTTTCCTTAAAAGGATTGTATTTAGCTTGGTGGTTGGCCGGTATATCTCCTCAGATATTGATGAAAAGTGCATATAGAAGTGTAATGTTCTATATTGGACAAAAGGAACTGGAGATGCAGTACAAGATGAACAGAATCGTGGCTCAATGCCGACAGAAATGTGAGGTTATACAAGAAAAGTTCACCGAGAAACTGGAGCAGGTGCATGCTGCATACCAAAAAATGGCCAAAAGATGCCAGATGATGGAGCGAGAAATGGAGAATTTATCCAAAGACAAACAAGAGCTACAGGAGAAGTTTGCTGATAACTCCAGGTCATCTCCTTTCATTTTTGCCTCCCACTTGTTAACTTCTGTTTTTAAGATCCTGATCCAGAAAATTCAATTGCATGTTAGGCAGAAGAGAAAACTAGATGAAATAGAAACCACGAGGAAAGGGCCAAGAGAAGAAATATGGCCGGCAAGACAAAACAGTGGGAACTCTAGTCACTTCGACATCTCCGTTGGATCACCGGCACAACAAGCTGCTCCAATGGCAATGGAAGCTGGGATCAGAAGAGCTGGAGCTCACTCTCTGCGTCTGGAAGTGGAGCTGGCAACCCCTCCATTTCTCTACGCAACTTCATTTTGTCCCCAATCAAACGACCACAGCTCTCTCGTCGCCCTCAAATGTTCACATTGTGAGATGGAAGCTAGTGAGGTGACATTTGGTGGCCAAAAGGGCAGATCAATTCGCTGGCTTTAA

Coding sequence (CDS)

ATGAAATGCAATGCTTGCTGGAGGGAACTTGAAGGGCGAGCTATCTCCACAACTTGTGGTCACCTGTTGTGCATAGAAGATGCAAGCAAGATCCTTACCAATGATGGAGCATGCCCCATTCGTGATCAAGTTCTTTCTAAAAGCCTCATGAAACCTGTGGATATCAATCCAAACGATGAATGGGTCAATGTAAGTGTTTCCTTAAAAGGATTGTATTTAGCTTGGTGGTTGGCCGGTATATCTCCTCAGATATTGATGAAAAGTGCATATAGAAGTGTAATGTTCTATATTGGACAAAAGGAACTGGAGATGCAGTACAAGATGAACAGAATCGTGGCTCAATGCCGACAGAAATGTGAGGTTATACAAGAAAAGTTCACCGAGAAACTGGAGCAGGTGCATGCTGCATACCAAAAAATGGCCAAAAGATGCCAGATGATGGAGCGAGAAATGGAGAATTTATCCAAAGACAAACAAGAGCTACAGGAGAAGTTTGCTGATAACTCCAGGTCATCTCCTTTCATTTTTGCCTCCCACTTGTTAACTTCTGTTTTTAAGATCCTGATCCAGAAAATTCAATTGCATGTTAGGCAGAAGAGAAAACTAGATGAAATAGAAACCACGAGGAAAGGGCCAAGAGAAGAAATATGGCCGGCAAGACAAAACAGTGGGAACTCTAGTCACTTCGACATCTCCGTTGGATCACCGGCACAACAAGCTGCTCCAATGGCAATGGAAGCTGGGATCAGAAGAGCTGGAGCTCACTCTCTGCGTCTGGAAGTGGAGCTGGCAACCCCTCCATTTCTCTACGCAACTTCATTTTGTCCCCAATCAAACGACCACAGCTCTCTCGTCGCCCTCAAATGTTCACATTGTGAGATGGAAGCTAGTGAGGTGACATTTGGTGGCCAAAAGGGCAGATCAATTCGCTGGCTTTAA

Protein sequence

MKCNACWRELEGRAISTTCGHLLCIEDASKILTNDGACPIRDQVLSKSLMKPVDINPNDEWVNVSVSLKGLYLAWWLAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFADNSRSSPFIFASHLLTSVFKILIQKIQLHVRQKRKLDEIETTRKGPREEIWPARQNSGNSSHFDISVGSPAQQAAPMAMEAGIRRAGAHSLRLEVELATPPFLYATSFCPQSNDHSSLVALKCSHCEMEASEVTFGGQKGRSIRWL
Homology
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BLAST of CmaCh16G004270 vs. Swiss-Prot
Match: HEI10_ARATH (E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Arabidopsis thaliana GN=HEI10 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.9e-71
Identity = 132/170 (77.65%), Postives = 151/170 (88.82%), Query Frame = 1 

Query: 1   MKCNACWRELEGRAISTTCGHLLCIEDASKILTNDGACPIRDQVLSKSLMKPVDINPNDE 60
           M+CNACWR+LEGRAISTTCGHLLC EDASKIL+NDGACPI DQVLSKSLMKPVDINPN+E
Sbjct: 1   MRCNACWRDLEGRAISTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNEE 60

Query: 61  WVNVSVSLKGLYLAWWLAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCE 120
           W+N++           +AGISPQILMKSAYRSVMFYI Q++LEMQYKMNR+VAQCRQKCE
Sbjct: 61  WINMA-----------MAGISPQILMKSAYRSVMFYIAQRDLEMQYKMNRVVAQCRQKCE 120

Query: 121 VIQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFADNSR 171
            +Q KF+EK+EQVH AYQKM KRCQMME+E+ENL+KDKQELQEKF++ SR
Sbjct: 121 GMQAKFSEKMEQVHTAYQKMGKRCQMMEQEVENLTKDKQELQEKFSEKSR 159

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BLAST of CmaCh16G004270 vs. Swiss-Prot
Match: HEI10_ORYSJ (E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Oryza sativa subsp. japonica GN=HEI10 PE=2 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.2e-70
Identity = 131/170 (77.06%), Postives = 148/170 (87.06%), Query Frame = 1 

Query: 1   MKCNACWRELEGRAISTTCGHLLCIEDASKILTNDGACPIRDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEG+A+STTCGHLLC EDA KIL+ND ACPI DQVLSKS M+PVD NPND+
Sbjct: 1   MKCNACWRELEGQAVSTTCGHLLCTEDAKKILSNDAACPICDQVLSKSHMRPVDTNPNDD 60

Query: 61  WVNVSVSLKGLYLAWWLAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCE 120
           W N+S           +AG+SPQILMKSAYRSVMFYIGQKELEMQYKMNRIV QCRQKCE
Sbjct: 61  WTNMS-----------MAGVSPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCE 120

Query: 121 VIQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFADNSR 171
           ++Q KFTEKLE+VH AYQKMAK+CQ+ME+E+ENLS+DKQELQEKFA+ SR
Sbjct: 121 LMQAKFTEKLEEVHTAYQKMAKKCQLMEQEVENLSRDKQELQEKFAEKSR 159

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BLAST of CmaCh16G004270 vs. TrEMBL
Match: A0A0A0KXL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083540 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 2.2e-90
Identity = 187/270 (69.26%), Postives = 208/270 (77.04%), Query Frame = 1 

Query: 1   MKCNACWRELEGRAISTTCGHLLCIEDASKILTNDGACPIRDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRA++TTCGHLLC EDASKIL+NDGACPI DQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAVTTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVNVSVSLKGLYLAWWLAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCE 120
           W N++           +AGISPQILMKSAYRSVMFY GQKELEMQYKMNR++AQCRQKCE
Sbjct: 61  WANMA-----------MAGISPQILMKSAYRSVMFYNGQKELEMQYKMNRLMAQCRQKCE 120

Query: 121 VIQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFADNSRSSPFIFASH- 180
           V+QEKFTEKLEQVH+AYQKMAKRCQMMEREMENLSKDKQELQEKFA+ SR    +   + 
Sbjct: 121 VMQEKFTEKLEQVHSAYQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRQKRKLDEMYD 180

Query: 181 LLTSVFKILIQKIQLHVRQKRKLDE---------IETTRKGPR----EEIWPARQNSGNS 240
            L +  + L +     V      +E         +   R+  R    EEIWP RQNSGNS
Sbjct: 181 QLRNEHESLKRSAIQPVTNFYTRNESDLFSNPVNLMDNREATRKGPREEIWPTRQNSGNS 240

Query: 241 SHFDISVGSPAQQAAPMAMEAGIRRAGAHS 257
            HFDISVGSPA+QAAPMAMEAG RRAGAH+
Sbjct: 241 GHFDISVGSPAKQAAPMAMEAGNRRAGAHT 259

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BLAST of CmaCh16G004270 vs. TrEMBL
Match: A0A061F8Z0_THECC (RING/U-box superfamily protein isoform 5 OS=Theobroma cacao GN=TCM_032113 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 3.2e-86
Identity = 176/270 (65.19%), Postives = 205/270 (75.93%), Query Frame = 1 

Query: 1   MKCNACWRELEGRAISTTCGHLLCIEDASKILTNDGACPIRDQVLSKSLMKPVDINPNDE 60
           M+CNACWRELEGRA+STTCGHLLC EDASKIL+ND ACPI DQVLSKSLMKPVDINPNDE
Sbjct: 1   MRCNACWRELEGRAVSTTCGHLLCTEDASKILSNDAACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVNVSVSLKGLYLAWWLAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCE 120
           W+N++           +AG+SPQILMKS+YRSVMFYIGQKELEMQYKMNRIVAQCRQKCE
Sbjct: 61  WINMA-----------MAGVSPQILMKSSYRSVMFYIGQKELEMQYKMNRIVAQCRQKCE 120

Query: 121 VIQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFADNSRSSPFI--FAS 180
            +QEKF+EKLEQVH AYQKMAKRCQMME+E+E+LSKDKQELQEKF++ SR    +     
Sbjct: 121 AMQEKFSEKLEQVHTAYQKMAKRCQMMEQEIESLSKDKQELQEKFSEKSRQKRKLDEMYD 180

Query: 181 HLLTSVFKILIQKIQ----LHVRQKRKL---------DEIETTRKGPREEIWPARQNSGN 240
            L +    +    IQ     +VR +  L         D  +  R+GPRE++WPARQNS N
Sbjct: 181 QLRSDYESMKRSAIQPSNNFYVRNEADLFSNPATNMVDGRDPIRRGPREDVWPARQNSSN 240

Query: 241 SSHFDISVGSPAQQAAPMAMEAGIRRAGAH 256
           S HFDIS GSPA+QAA + ++ G RR GAH
Sbjct: 241 SGHFDISGGSPAKQAA-IPVDVGNRRGGAH 258

[Close]
BLAST of CmaCh16G004270 vs. TrEMBL
Match: A0A061F817_THECC (RING/U-box superfamily protein isoform 4 OS=Theobroma cacao GN=TCM_032113 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 3.2e-86
Identity = 176/270 (65.19%), Postives = 205/270 (75.93%), Query Frame = 1 

Query: 1   MKCNACWRELEGRAISTTCGHLLCIEDASKILTNDGACPIRDQVLSKSLMKPVDINPNDE 60
           M+CNACWRELEGRA+STTCGHLLC EDASKIL+ND ACPI DQVLSKSLMKPVDINPNDE
Sbjct: 1   MRCNACWRELEGRAVSTTCGHLLCTEDASKILSNDAACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVNVSVSLKGLYLAWWLAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCE 120
           W+N++           +AG+SPQILMKS+YRSVMFYIGQKELEMQYKMNRIVAQCRQKCE
Sbjct: 61  WINMA-----------MAGVSPQILMKSSYRSVMFYIGQKELEMQYKMNRIVAQCRQKCE 120

Query: 121 VIQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFADNSRSSPFI--FAS 180
            +QEKF+EKLEQVH AYQKMAKRCQMME+E+E+LSKDKQELQEKF++ SR    +     
Sbjct: 121 AMQEKFSEKLEQVHTAYQKMAKRCQMMEQEIESLSKDKQELQEKFSEKSRQKRKLDEMYD 180

Query: 181 HLLTSVFKILIQKIQ----LHVRQKRKL---------DEIETTRKGPREEIWPARQNSGN 240
            L +    +    IQ     +VR +  L         D  +  R+GPRE++WPARQNS N
Sbjct: 181 QLRSDYESMKRSAIQPSNNFYVRNEADLFSNPATNMVDGRDPIRRGPREDVWPARQNSSN 240

Query: 241 SSHFDISVGSPAQQAAPMAMEAGIRRAGAH 256
           S HFDIS GSPA+QAA + ++ G RR GAH
Sbjct: 241 SGHFDISGGSPAKQAA-IPVDVGNRRGGAH 258

[Close]
BLAST of CmaCh16G004270 vs. TrEMBL
Match: K7LCW0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 9.4e-86
Identity = 172/269 (63.94%), Postives = 207/269 (76.95%), Query Frame = 1 

Query: 1   MKCNACWRELEGRAISTTCGHLLCIEDASKILTNDGACPIRDQVLSKSLMKPVDINPNDE 60
           M+CNACWRE+EGRAISTTCGHLLC +DA+KIL+NDGACPI DQVLSKSLMKPVD+NPNDE
Sbjct: 1   MRCNACWREVEGRAISTTCGHLLCTDDANKILSNDGACPICDQVLSKSLMKPVDVNPNDE 60

Query: 61  WVNVSVSLKGLYLAWWLAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCE 120
           WVN++           +AG+SPQILMKSAYRSVMFY+GQKELE+Q+KMN+IVAQCRQKCE
Sbjct: 61  WVNMA-----------MAGVSPQILMKSAYRSVMFYMGQKELEIQFKMNKIVAQCRQKCE 120

Query: 121 VIQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFADNSRSSPFIFASH- 180
            +QEKFTEKLEQVH AYQKMAK+CQMM++E+E+++KD QELQEKFA+ SR    +   + 
Sbjct: 121 TMQEKFTEKLEQVHTAYQKMAKKCQMMQQEIESITKDNQELQEKFAEKSRQKRKLDEMYD 180

Query: 181 ----LLTSVFKILIQKIQ-LHVRQKRKL--------DEIETTRKGPREEIWPARQNSGNS 240
                  SV +  IQ     + R +  L        D+ E  RKGPRE++WPARQNS NS
Sbjct: 181 QLRNEYDSVKRFAIQPANNFYARNEHDLFSNPPNIMDDREMGRKGPREDVWPARQNSNNS 240

Query: 241 SHFDISVGSPAQQAAPMAMEAGIRRAGAH 256
            HFD+SVGSPA+Q   +A +AG RRAGAH
Sbjct: 241 GHFDLSVGSPAKQTV-IAGDAGSRRAGAH 257

[Close]
BLAST of CmaCh16G004270 vs. TrEMBL
Match: A0A072TPI1_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_8g054400 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.6e-85
Identity = 174/269 (64.68%), Postives = 205/269 (76.21%), Query Frame = 1 

Query: 1   MKCNACWRELEGRAISTTCGHLLCIEDASKILTNDGACPIRDQVLSKSLMKPVDINPNDE 60
           M+CNACWRE+EGRAISTTCGHLLC EDA+KIL+NDGACP+ DQVLSKSLMKPVD+NPNDE
Sbjct: 1   MRCNACWREVEGRAISTTCGHLLCTEDANKILSNDGACPVCDQVLSKSLMKPVDVNPNDE 60

Query: 61  WVNVSVSLKGLYLAWWLAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCE 120
           WVN++           + G+SPQILMKSAY+SVMFYIGQKELEMQ KMN+IV QCRQKCE
Sbjct: 61  WVNMA-----------MVGVSPQILMKSAYKSVMFYIGQKELEMQCKMNKIVGQCRQKCE 120

Query: 121 VIQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFADNSRSSPFIFASH- 180
           ++QEKFTEKLEQ+H AYQKMAKRCQMM++E+E+L+KD QELQEKFA+ SR    +   + 
Sbjct: 121 MMQEKFTEKLEQLHTAYQKMAKRCQMMQQEIESLTKDNQELQEKFAEKSRQKRKLDEMYD 180

Query: 181 ----LLTSVFKILIQKIQ-LHVRQKRKL--------DEIETTRKGPREEIWPARQNSGNS 240
                  SV +  IQ     + R +R L        DE ET RKGPRE++WPARQNS NS
Sbjct: 181 QLRNEFDSVKRSAIQPASNFYSRNERDLFSNPPNILDERETGRKGPREDVWPARQNSNNS 240

Query: 241 SHFDISVGSPAQQAAPMAMEAGIRRAGAH 256
            HFDISVGSPA+Q   +  +AG RR GAH
Sbjct: 241 GHFDISVGSPAKQTI-IPGDAGNRRVGAH 257

[Close]
BLAST of CmaCh16G004270 vs. TAIR10
Match: AT1G53490.1 (AT1G53490.1 RING/U-box superfamily protein)

HSP 1 Score: 270.8 bits (691), Expect = 1.1e-72
Identity = 132/170 (77.65%), Postives = 151/170 (88.82%), Query Frame = 1 

Query: 1   MKCNACWRELEGRAISTTCGHLLCIEDASKILTNDGACPIRDQVLSKSLMKPVDINPNDE 60
           M+CNACWR+LEGRAISTTCGHLLC EDASKIL+NDGACPI DQVLSKSLMKPVDINPN+E
Sbjct: 1   MRCNACWRDLEGRAISTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNEE 60

Query: 61  WVNVSVSLKGLYLAWWLAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCE 120
           W+N++           +AGISPQILMKSAYRSVMFYI Q++LEMQYKMNR+VAQCRQKCE
Sbjct: 61  WINMA-----------MAGISPQILMKSAYRSVMFYIAQRDLEMQYKMNRVVAQCRQKCE 120

Query: 121 VIQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFADNSR 171
            +Q KF+EK+EQVH AYQKM KRCQMME+E+ENL+KDKQELQEKF++ SR
Sbjct: 121 GMQAKFSEKMEQVHTAYQKMGKRCQMMEQEVENLTKDKQELQEKFSEKSR 159

[Close]
BLAST of CmaCh16G004270 vs. NCBI nr
Match: gi|778691555|ref|XP_011653301.1| (PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 [Cucumis sativus])

HSP 1 Score: 340.5 bits (872), Expect = 3.1e-90
Identity = 187/270 (69.26%), Postives = 208/270 (77.04%), Query Frame = 1 

Query: 1   MKCNACWRELEGRAISTTCGHLLCIEDASKILTNDGACPIRDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRA++TTCGHLLC EDASKIL+NDGACPI DQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAVTTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVNVSVSLKGLYLAWWLAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCE 120
           W N++           +AGISPQILMKSAYRSVMFY GQKELEMQYKMNR++AQCRQKCE
Sbjct: 61  WANMA-----------MAGISPQILMKSAYRSVMFYNGQKELEMQYKMNRLMAQCRQKCE 120

Query: 121 VIQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFADNSRSSPFIFASH- 180
           V+QEKFTEKLEQVH+AYQKMAKRCQMMEREMENLSKDKQELQEKFA+ SR    +   + 
Sbjct: 121 VMQEKFTEKLEQVHSAYQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRQKRKLDEMYD 180

Query: 181 LLTSVFKILIQKIQLHVRQKRKLDE---------IETTRKGPR----EEIWPARQNSGNS 240
            L +  + L +     V      +E         +   R+  R    EEIWP RQNSGNS
Sbjct: 181 QLRNEHESLKRSAIQPVTNFYTRNESDLFSNPVNLMDNREATRKGPREEIWPTRQNSGNS 240

Query: 241 SHFDISVGSPAQQAAPMAMEAGIRRAGAHS 257
            HFDISVGSPA+QAAPMAMEAG RRAGAH+
Sbjct: 241 GHFDISVGSPAKQAAPMAMEAGNRRAGAHT 259

[Close]
BLAST of CmaCh16G004270 vs. NCBI nr
Match: gi|778691552|ref|XP_011653300.1| (PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 [Cucumis sativus])

HSP 1 Score: 340.5 bits (872), Expect = 3.1e-90
Identity = 187/270 (69.26%), Postives = 208/270 (77.04%), Query Frame = 1 

Query: 1   MKCNACWRELEGRAISTTCGHLLCIEDASKILTNDGACPIRDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRA++TTCGHLLC EDASKIL+NDGACPI DQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAVTTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVNVSVSLKGLYLAWWLAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCE 120
           W N++           +AGISPQILMKSAYRSVMFY GQKELEMQYKMNR++AQCRQKCE
Sbjct: 61  WANMA-----------MAGISPQILMKSAYRSVMFYNGQKELEMQYKMNRLMAQCRQKCE 120

Query: 121 VIQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFADNSRSSPFIFASH- 180
           V+QEKFTEKLEQVH+AYQKMAKRCQMMEREMENLSKDKQELQEKFA+ SR    +   + 
Sbjct: 121 VMQEKFTEKLEQVHSAYQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRQKRKLDEMYD 180

Query: 181 LLTSVFKILIQKIQLHVRQKRKLDE---------IETTRKGPR----EEIWPARQNSGNS 240
            L +  + L +     V      +E         +   R+  R    EEIWP RQNSGNS
Sbjct: 181 QLRNEHESLKRSAIQPVTNFYTRNESDLFSNPVNLMDNREATRKGPREEIWPTRQNSGNS 240

Query: 241 SHFDISVGSPAQQAAPMAMEAGIRRAGAHS 257
            HFDISVGSPA+QAAPMAMEAG RRAGAH+
Sbjct: 241 GHFDISVGSPAKQAAPMAMEAGNRRAGAHT 259

[Close]
BLAST of CmaCh16G004270 vs. NCBI nr
Match: gi|590611024|ref|XP_007021985.1| (RING/U-box superfamily protein isoform 4 [Theobroma cacao])

HSP 1 Score: 326.6 bits (836), Expect = 4.6e-86
Identity = 176/270 (65.19%), Postives = 205/270 (75.93%), Query Frame = 1 

Query: 1   MKCNACWRELEGRAISTTCGHLLCIEDASKILTNDGACPIRDQVLSKSLMKPVDINPNDE 60
           M+CNACWRELEGRA+STTCGHLLC EDASKIL+ND ACPI DQVLSKSLMKPVDINPNDE
Sbjct: 1   MRCNACWRELEGRAVSTTCGHLLCTEDASKILSNDAACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVNVSVSLKGLYLAWWLAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCE 120
           W+N++           +AG+SPQILMKS+YRSVMFYIGQKELEMQYKMNRIVAQCRQKCE
Sbjct: 61  WINMA-----------MAGVSPQILMKSSYRSVMFYIGQKELEMQYKMNRIVAQCRQKCE 120

Query: 121 VIQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFADNSRSSPFI--FAS 180
            +QEKF+EKLEQVH AYQKMAKRCQMME+E+E+LSKDKQELQEKF++ SR    +     
Sbjct: 121 AMQEKFSEKLEQVHTAYQKMAKRCQMMEQEIESLSKDKQELQEKFSEKSRQKRKLDEMYD 180

Query: 181 HLLTSVFKILIQKIQ----LHVRQKRKL---------DEIETTRKGPREEIWPARQNSGN 240
            L +    +    IQ     +VR +  L         D  +  R+GPRE++WPARQNS N
Sbjct: 181 QLRSDYESMKRSAIQPSNNFYVRNEADLFSNPATNMVDGRDPIRRGPREDVWPARQNSSN 240

Query: 241 SSHFDISVGSPAQQAAPMAMEAGIRRAGAH 256
           S HFDIS GSPA+QAA + ++ G RR GAH
Sbjct: 241 SGHFDISGGSPAKQAA-IPVDVGNRRGGAH 258

[Close]
BLAST of CmaCh16G004270 vs. NCBI nr
Match: gi|590611027|ref|XP_007021986.1| (RING/U-box superfamily protein isoform 5 [Theobroma cacao])

HSP 1 Score: 326.6 bits (836), Expect = 4.6e-86
Identity = 176/270 (65.19%), Postives = 205/270 (75.93%), Query Frame = 1 

Query: 1   MKCNACWRELEGRAISTTCGHLLCIEDASKILTNDGACPIRDQVLSKSLMKPVDINPNDE 60
           M+CNACWRELEGRA+STTCGHLLC EDASKIL+ND ACPI DQVLSKSLMKPVDINPNDE
Sbjct: 1   MRCNACWRELEGRAVSTTCGHLLCTEDASKILSNDAACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVNVSVSLKGLYLAWWLAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCE 120
           W+N++           +AG+SPQILMKS+YRSVMFYIGQKELEMQYKMNRIVAQCRQKCE
Sbjct: 61  WINMA-----------MAGVSPQILMKSSYRSVMFYIGQKELEMQYKMNRIVAQCRQKCE 120

Query: 121 VIQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFADNSRSSPFI--FAS 180
            +QEKF+EKLEQVH AYQKMAKRCQMME+E+E+LSKDKQELQEKF++ SR    +     
Sbjct: 121 AMQEKFSEKLEQVHTAYQKMAKRCQMMEQEIESLSKDKQELQEKFSEKSRQKRKLDEMYD 180

Query: 181 HLLTSVFKILIQKIQ----LHVRQKRKL---------DEIETTRKGPREEIWPARQNSGN 240
            L +    +    IQ     +VR +  L         D  +  R+GPRE++WPARQNS N
Sbjct: 181 QLRSDYESMKRSAIQPSNNFYVRNEADLFSNPATNMVDGRDPIRRGPREDVWPARQNSSN 240

Query: 241 SSHFDISVGSPAQQAAPMAMEAGIRRAGAH 256
           S HFDIS GSPA+QAA + ++ G RR GAH
Sbjct: 241 SGHFDISGGSPAKQAA-IPVDVGNRRGGAH 258

[Close]
BLAST of CmaCh16G004270 vs. NCBI nr
Match: gi|955340756|ref|XP_014617534.1| (PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 [Glycine max])

HSP 1 Score: 325.1 bits (832), Expect = 1.3e-85
Identity = 172/269 (63.94%), Postives = 207/269 (76.95%), Query Frame = 1 

Query: 1   MKCNACWRELEGRAISTTCGHLLCIEDASKILTNDGACPIRDQVLSKSLMKPVDINPNDE 60
           M+CNACWRE+EGRAISTTCGHLLC +DA+KIL+NDGACPI DQVLSKSLMKPVD+NPNDE
Sbjct: 1   MRCNACWREVEGRAISTTCGHLLCTDDANKILSNDGACPICDQVLSKSLMKPVDVNPNDE 60

Query: 61  WVNVSVSLKGLYLAWWLAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCE 120
           WVN++           +AG+SPQILMKSAYRSVMFY+GQKELE+Q+KMN+IVAQCRQKCE
Sbjct: 61  WVNMA-----------MAGVSPQILMKSAYRSVMFYMGQKELEIQFKMNKIVAQCRQKCE 120

Query: 121 VIQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFADNSRSSPFIFASH- 180
            +QEKFTEKLEQVH AYQKMAK+CQMM++E+E+++KD QELQEKFA+ SR    +   + 
Sbjct: 121 TMQEKFTEKLEQVHTAYQKMAKKCQMMQQEIESITKDNQELQEKFAEKSRQKRKLDEMYD 180

Query: 181 ----LLTSVFKILIQKIQ-LHVRQKRKL--------DEIETTRKGPREEIWPARQNSGNS 240
                  SV +  IQ     + R +  L        D+ E  RKGPRE++WPARQNS NS
Sbjct: 181 QLRNEYDSVKRFAIQPANNFYARNEHDLFSNPPNIMDDREMGRKGPREDVWPARQNSNNS 240

Query: 241 SHFDISVGSPAQQAAPMAMEAGIRRAGAH 256
            HFD+SVGSPA+Q   +A +AG RRAGAH
Sbjct: 241 GHFDLSVGSPAKQTV-IAGDAGSRRAGAH 257

The following BLAST results are available for this feature:
BLAST of CmaCh16G004270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HEI10_ARATH1.9e-7177.65E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Arabidopsis thaliana GN=HEI10 PE... [more]
HEI10_ORYSJ1.2e-7077.06E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Oryza sativa subsp. japonica GN=... [more]
BLAST of CmaCh16G004270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXL4_CUCSA2.2e-9069.26Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083540 PE=4 SV=1[more]
A0A061F8Z0_THECC3.2e-8665.19RING/U-box superfamily protein isoform 5 OS=Theobroma cacao GN=TCM_032113 PE=4 S... [more]
A0A061F817_THECC3.2e-8665.19RING/U-box superfamily protein isoform 4 OS=Theobroma cacao GN=TCM_032113 PE=4 S... [more]
K7LCW0_SOYBN9.4e-8663.94Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A072TPI1_MEDTR1.6e-8564.68Uncharacterized protein OS=Medicago truncatula GN=MTR_8g054400 PE=4 SV=1[more]
BLAST of CmaCh16G004270 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G53490.11.1e-7277.65 RING/U-box superfamily protein[more]
BLAST of CmaCh16G004270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778691555|ref|XP_011653301.1|3.1e-9069.26PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 [Cucumis sati... [more]
gi|778691552|ref|XP_011653300.1|3.1e-9069.26PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 [Cucumis sati... [more]
gi|590611024|ref|XP_007021985.1|4.6e-8665.19RING/U-box superfamily protein isoform 4 [Theobroma cacao][more]
gi|590611027|ref|XP_007021986.1|4.6e-8665.19RING/U-box superfamily protein isoform 5 [Theobroma cacao][more]
gi|955340756|ref|XP_014617534.1|1.3e-8563.94PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007126 meiotic nuclear division
biological_process GO:0035825 reciprocal DNA recombination
biological_process GO:0051026 chiasma assembly
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005694 chromosome
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G004270.1CmaCh16G004270.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 2..46
score: 1.
NoneNo IPR availableunknownCoilCoilcoord: 130..171
scor
NoneNo IPR availablePANTHERPTHR23041RING FINGER DOMAIN-CONTAININGcoord: 1..167
score: 1.1E-116coord: 195..205
score: 1.1E
NoneNo IPR availablePANTHERPTHR23041:SF65E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOGcoord: 1..167
score: 1.1E-116coord: 195..205
score: 1.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G004270Cucsa.273620Cucumber (Gy14) v1cgycmaB0759
CmaCh16G004270Cla002445Watermelon (97103) v1cmawmB311
CmaCh16G004270Csa4G083540Cucumber (Chinese Long) v2cmacuB337
CmaCh16G004270MELO3C016116Melon (DHL92) v3.5.1cmameB301
CmaCh16G004270ClCG07G010130Watermelon (Charleston Gray)cmawcgB300
CmaCh16G004270CSPI04G07980Wild cucumber (PI 183967)cmacpiB342
CmaCh16G004270CmoCh04G007060Cucurbita moschata (Rifu)cmacmoB340
CmaCh16G004270CmoCh16G004590Cucurbita moschata (Rifu)cmacmoB322
CmaCh16G004270Lsi07G002890Bottle gourd (USVL1VR-Ls)cmalsiB329
CmaCh16G004270Cp4.1LG14g03620Cucurbita pepo (Zucchini)cmacpeB344
CmaCh16G004270Cp4.1LG01g00680Cucurbita pepo (Zucchini)cmacpeB353
CmaCh16G004270MELO3C016116.2Melon (DHL92) v3.6.1cmamedB351
CmaCh16G004270CsaV3_4G008200Cucumber (Chinese Long) v3cmacucB0393
CmaCh16G004270Cla97C07G136810Watermelon (97103) v2cmawmbB350
CmaCh16G004270Bhi01G002496Wax gourdcmawgoB0437
CmaCh16G004270CsGy4G007850Cucumber (Gy14) v2cgybcmaB498
CmaCh16G004270Carg11358Silver-seed gourdcarcmaB0924
CmaCh16G004270Carg13095Silver-seed gourdcarcmaB0052
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh16G004270CmaCh04G006570Cucurbita maxima (Rimu)cmacmaB353
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G004270Watermelon (Charleston Gray)cmawcgB288
CmaCh16G004270Watermelon (97103) v1cmawmB325
CmaCh16G004270Cucurbita pepo (Zucchini)cmacpeB351
CmaCh16G004270Cucurbita pepo (Zucchini)cmacpeB352
CmaCh16G004270Bottle gourd (USVL1VR-Ls)cmalsiB311
CmaCh16G004270Cucumber (Gy14) v2cgybcmaB500
CmaCh16G004270Silver-seed gourdcarcmaB0053
CmaCh16G004270Cucumber (Chinese Long) v3cmacucB0396
CmaCh16G004270Watermelon (97103) v2cmawmbB340
CmaCh16G004270Wax gourdcmawgoB0451
CmaCh16G004270Cucurbita maxima (Rimu)cmacmaB351
CmaCh16G004270Cucurbita maxima (Rimu)cmacmaB352
CmaCh16G004270Cucurbita moschata (Rifu)cmacmoB338
CmaCh16G004270Cucurbita moschata (Rifu)cmacmoB339
CmaCh16G004270Wild cucumber (PI 183967)cmacpiB345