CmoCh16G004060 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCCGGAGCCTAACCGTCATGACGACCTTGTTTTCAATATATACGACGTCGTTTCTAGAGACGAGGGAAATGGGTCGGTGACGGTTGTGACGGAGAAGGAGTTTCCGTTCATTGGGAAATCTGGGTTGACGGCGGTTCTCGAGAAGCTTGAGGCCAACACCGCCCGCTCGCCGGTATACATCACCGACCCGTCGGTGCAGCTGGTATATATTGCAAGCGGGTCGGGTCGGGTTCAGATTGTTGGGTTTTTGGGGAAAATTGATACGGTGGTGAAAGCGGGTCAGTTGGTTTTGGTTCCGAAGTATTTCGCCGCCGGTAAGATCGCCGGCGAAGAAGGCTTGGAGTGCTTCACCATTGTCACTTCCACAAGGTAATATTCAATTTTGATTCTCTTTTTTTTTTTAAAAAATAATATTTATAAACTTAAAAATCATATAAATTAAATAAATATAAGGTATATAATTAACCGAGTTCGGTTGCTTGTAACACAGCCCTAAGCTAGAAGAGTTAGGAGGAAAAACATCAATTCTCGGAACGTTTTCCCCACAAGTTTTTCAAGCTTCATTCAACGTGACGGCTAAGCTGGAAAAGCTTTTTAGATCGAAAATAACAGAAGCGTCGCCCATTAATAAATAATGTATAATTTACCCGATGTTAATTTTATTATATGATTCAAATCCGTGCCCAATCTTAATAAATAAATAATATTCAATCTTTTATATAAAATATCATAATCGTTAAACTATATTATATATTGTAATGAGGTTACACAATAATAATTAAATTAATAATAGTTTATATTCCACGTGTAATTTTAATAAGTAATTTAAATTAACAATAAATTCAACTATATATTTTTTTAGTAACTTCCTTATTTTCAAACGAGTTGGTACGACATTTTGACTTTATCAACGACTTTAGACATGTGACTATTTGTAGCAATTTAATATTTTTATTCATAGACCTAAGTTTGTAATAATTTTAAAATTATTGTCTTATATGAACAAATAATTAAATTATTTTTTTTATTATAGCTTAATCGATTAAAATATATTATCAAATTATATTAAAATTAAAATAATTAAGTCAAAGTTTGGTTGCTTAATTTGACACACAATTCGATTCGGTTAATAAAAGACGAAATCAAAATGTATTAAAATATGATTTTGATGTTCGTAATTTGTACGTGTGTGTATATTATATATATATATATGTAATTAAGTCAAAAGTTTGATTGCTTAATTTGACCTACCATTCGATTCGTTTAATAAAAGACGAAATCAAAATGTATTAAAATATGATTTTGATGTTTGTAATTTGTACGTACTTGTGTGTGTGTGTGTATATATATATATATATATATATTAAGGTCTTTCAATGTAATGTCGCTTCTTATCTTGTCATCTTGATCCCCATCAACATGGTTCATATGTCTTGACGCCATCTCGAGTCTCGGGATGTCGTCAGCTATCACAACTCGCTTGGTCATGCCATTGAGAATGGACCCGCGTGTCGCTCATCTCATCGGGACTTTCCGAACATCCATCCATCCGGGTTCTATTGAGGCATTGGCCCTCTCGTGCTCATGCCATGTCATTTACGGATATTGTCCTAGATAGTGGGTGTATGTAGCAACCTCCCACATGCGAGTTGGGGTGTAATACTGGCACACCTGTGCCGCTTGGTGGTGTCATTGAAAAACCCATTTCAAAAGAAGTTGCCCGACACTCGTCTCGGCACGCTCGCCTACGCTGTGAAACACACATGTCCGTGCCCATGCCATGTCATTTACGGATACCGTCTCGGATAGCGGGTGTATGTAACAACCTCCAACACGCAGGTTGGGATGCAATATTAGCACACCTGTGGCGCCCGATACTGTCCTTGAAAAACTCATTTCAAAGGAAGTCACCCGACACTCGTCTTGGCACACTCGCCCACGCTGTGACACACGCATGTCCGTGCCCATGCCATGTCATTTACGGATACCGTCCTGGATAGTAAGTGTATGTAGCAACTTCCAACACACAGGTTGGGGCATAATATCAACACACCCGTGCCGCTCGATACTGTCCTTAAAAAACCCATTTCAAAGGAAGTCGCCGGAGACACTCGTCTCGGTACGCTCGCCCACTCTGTGACACATGCATGTGCTACTAGGTACAAAAATTTGAGTTTATTTATTACTAGGCAATTAAGAAAAAATAAAAAATATATTTATGAAATTATTTCCACATCATTTATTGTGGATAGGAATCCATACACGTGGAGATTGAAGACAAGAAGGGGTATTGTTTTGTAGTTATAAATAAACACGTGATGTATTTTAATTTTTATTTTATAATTTCAATATAATTGGGGGGTATGGTTGCAAACACGTATAAATTGTTGTTAATGATGAAGTGTTGCAATTGCAATTATCTCCCTTAAATTATACATATTTATAAAAAGATCCCCACTTGTCGGTAGAATTGCTTTAAATACCCCAAGGTGGAAGCCACTGGAAACCACCCCTTCCATGGAACAGCCGATGAATCCAAAGCCCTTCACTGAGGTAGAAGCTGGATCTTATCACAAATGGCTGCCTTCTGAATACCCTTTGCTTGCTCAGAACAAAGTCGCCGCCGGCCGCCTTCTCCTCCGCCCTCGCGGCTTCGTGGTCCCCCACTACGCCGATTGTTCTAAAGTGGGTTATGTTCTTCAAGGTAATCAACTTCTCAGTGTGTTATATGATATTGTCCACTTTGAACATAAGCTATTATGACTCTGTTTGAATTCTCTTCCAATAATTCCCGATGTATTTTGGTTGCAGGGGAGAATGGAGTTGCCGGGTTGGTGTTTCCGAGCAAGTCCGATGAGGTGGTGGTGAACTTGAAGAAAGGAGATTTGATTCCAGTGCCGAACGGAGTCTCGTCGTGGTGGTTCAACGACGGTGACTCCGATTTGGAAATCATTTTTTTGGGTGAATCAAAAAACGCTCATGTTCCTGGTGACATCTCTTACTTTGTTCTCTCCGGACCTCTCAGCCTCCTGCATGGCTTCTCGCCGGAGTACGTCGGAAAAACCTATTCTCTAAACGGAGAAGAAACAACCCAATTTCTCAAAAGTCAATCCAACGCTCTGATTTTCTCAATTCAGCAAACTCAATCCCTTCCCAAGCCATCCAAATACAGTAAATTTGTTTACAACATTGACGCCGCCGCGCCGGACGGTAGAGTCAAGGGCGGCGCCGGCGCTGTCACGACGGTGACGGAATCAAAATTTCCGTTCATTGGTCAATCTGGGTTGACGGCAATTCTCGAAAAGCTCAACGCCAACGCCGTCCGTTCGCCGGTGTACGTCGCGGAGCCGTACGATCAACTGATCTACGTGGCTAAAGGACGTGGGAAAATCCAGATCGTTGGATCTTCGAGTAAAATTGATGCAGAGGTGAAAATGGGTCAGCTGATTTTAGTCCCCAAATTCTTCGCCGTCGGAAAAATCGCCGGAGAAGATGGCTTGGAGTGCATCTCCATTATCACAGCAACACAGTAAAAAGCTTCAATTTTTACCCTTTTATTTTTAACTTTAATCTCTGAACCTTAAAATTTGACGTTGTAAAATTGAACAGCCCTGTGGTGGAAGAACTGGCCGGAAAGACGTCGGTGTTGGAGGCATTGTCACCGGAGATTTTTCAAGTTTCGTTCAATGTCACGGCGGAGTTCGAGAAGCTTCTTAGATCGAAGATCACAAACGCTTCACCGGTGATCGGATCTTCCGATTGAAGACTGAATTATTAATATTAGAATATAATATTTGAATGTTTGGGTATTATTATTATTATTGGTTTTTACGCTATTAAATTTGATCCCCAATCCCTATGATAGTGATGTGGGGGCTTTCTGGTCATTTCACCACTTGAACTTTTATATGAATTATTGTGAAGATTATGATTGTTGATGAATGTATTGTCTAATATAATATCTTATA ATGATGCCGGAGCCTAACCGTCATGACGACCTTGTTTTCAATATATACGACGTCGTTTCTAGAGACGAGGGAAATGGGTCGGTGACGGTTGTGACGGAGAAGGAGTTTCCGTTCATTGGGAAATCTGGGTTGACGGCGGTTCTCGAGAAGCTTGAGGCCAACACCGCCCGCTCGCCGGTATACATCACCGACCCGTCGGTGCAGCTGGTATATATTGCAAGCGGGTCGGGTCGGGTTCAGATTGTTGGGTTTTTGGGGAAAATTGATACGGTGGTGAAAGCGGGTCAGTTGGTTTTGGTTCCGAAGTATTTCGCCGCCGGTAAGATCGCCGGCGAAGAAGGCTTGGAGTGCTTCACCATTGTCACTTCCACAAGCAAGTCCGATGAGGTGGTGGTGAACTTGAAGAAAGGAGATTTGATTCCAGTGCCGAACGGAGTCTCGTCGTGGTGGTTCAACGACGGTGACTCCGATTTGGAAATCATTTTTTTGGGTGAATCAAAAAACGCTCATGTTCCTGGTGACATCTCTTACTTTGTTCTCTCCGGACCTCTCAGCCTCCTGCATGGCTTCTCGCCGGAGTACGTCGGAAAAACCTATTCTCTAAACGGAGAAGAAACAACCCAATTTCTCAAAAGTCAATCCAACGCTCTGATTTTCTCAATTCAGCAAACTCAATCCCTTCCCAAGCCATCCAAATACAGTAAATTTGTTTACAACATTGACGCCGCCGCGCCGGACGGTAGAGTCAAGGGCGGCGCCGGCGCTGTCACGACGGTGACGGAATCAAAATTTCCGTTCATTGGTCAATCTGGGTTGACGGCAATTCTCGAAAAGCTCAACGCCAACGCCGTCCGTTCGCCGGTGTACGTCGCGGAGCCGTACGATCAACTGATCTACGTGGCTAAAGGACGTGGGAAAATCCAGATCGTTGGATCTTCGAGTAAAATTGATGCAGAGGTGAAAATGGGTCAGCTGATTTTAGTCCCCAAATTCTTCGCCGTCGGAAAAATCGCCGGAGAAGATGGCTTGGAGTGCATCTCCATTATCACAGCAACACACCCTGTGGTGGAAGAACTGGCCGGAAAGACGTCGGTGTTGGAGGCATTGTCACCGGAGATTTTTCAAGTTTCGTTCAATGTCACGGCGGAGTTCGAGAAGCTTCTTAGATCGAAGATCACAAACGCTTCACCGGTGATCGGATCTTCCGATTGAAGACTGAATTATTAATATTAGAATATAATATTTGAATGTTTGGGTATTATTATTATTATTGGTTTTTACGCTATTAAATTTGATCCCCAATCCCTATGATAGTGATGTGGGGGCTTTCTGGTCATTTCACCACTTGAACTTTTATATGAATTATTGTGAAGATTATGATTGTTGATGAATGTATTGTCTAATATAATATCTTATA ATGATGCCGGAGCCTAACCGTCATGACGACCTTGTTTTCAATATATACGACGTCGTTTCTAGAGACGAGGGAAATGGGTCGGTGACGGTTGTGACGGAGAAGGAGTTTCCGTTCATTGGGAAATCTGGGTTGACGGCGGTTCTCGAGAAGCTTGAGGCCAACACCGCCCGCTCGCCGGTATACATCACCGACCCGTCGGTGCAGCTGGTATATATTGCAAGCGGGTCGGGTCGGGTTCAGATTGTTGGGTTTTTGGGGAAAATTGATACGGTGGTGAAAGCGGGTCAGTTGGTTTTGGTTCCGAAGTATTTCGCCGCCGGTAAGATCGCCGGCGAAGAAGGCTTGGAGTGCTTCACCATTGTCACTTCCACAAGCAAGTCCGATGAGGTGGTGGTGAACTTGAAGAAAGGAGATTTGATTCCAGTGCCGAACGGAGTCTCGTCGTGGTGGTTCAACGACGGTGACTCCGATTTGGAAATCATTTTTTTGGGTGAATCAAAAAACGCTCATGTTCCTGGTGACATCTCTTACTTTGTTCTCTCCGGACCTCTCAGCCTCCTGCATGGCTTCTCGCCGGAGTACGTCGGAAAAACCTATTCTCTAAACGGAGAAGAAACAACCCAATTTCTCAAAAGTCAATCCAACGCTCTGATTTTCTCAATTCAGCAAACTCAATCCCTTCCCAAGCCATCCAAATACAGTAAATTTGTTTACAACATTGACGCCGCCGCGCCGGACGGTAGAGTCAAGGGCGGCGCCGGCGCTGTCACGACGGTGACGGAATCAAAATTTCCGTTCATTGGTCAATCTGGGTTGACGGCAATTCTCGAAAAGCTCAACGCCAACGCCGTCCGTTCGCCGGTGTACGTCGCGGAGCCGTACGATCAACTGATCTACGTGGCTAAAGGACGTGGGAAAATCCAGATCGTTGGATCTTCGAGTAAAATTGATGCAGAGGTGAAAATGGGTCAGCTGATTTTAGTCCCCAAATTCTTCGCCGTCGGAAAAATCGCCGGAGAAGATGGCTTGGAGTGCATCTCCATTATCACAGCAACACACCCTGTGGTGGAAGAACTGGCCGGAAAGACGTCGGTGTTGGAGGCATTGTCACCGGAGATTTTTCAAGTTTCGTTCAATGTCACGGCGGAGTTCGAGAAGCTTCTTAGATCGAAGATCACAAACGCTTCACCGGTGATCGGATCTTCCGATTGA
BLAST of CmoCh16G004060 vs. Swiss-Prot
Match: CRU4_ARATH (12S seed storage protein CRD OS=Arabidopsis thaliana GN=CRD PE=1 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.7e-19 Identity = 97/390 (24.87%), Postives = 167/390 (42.82%), Query Frame = 1
BLAST of CmoCh16G004060 vs. Swiss-Prot
Match: GLUB2_ORYSJ (Glutelin type-B 2 OS=Oryza sativa subsp. japonica GN=GLUB2 PE=2 SV=2) HSP 1 Score: 89.0 bits (219), Expect = 1.3e-16 Identity = 72/312 (23.08%), Postives = 142/312 (45.51%), Query Frame = 1
BLAST of CmoCh16G004060 vs. Swiss-Prot
Match: 11S2_SESIN (11S globulin seed storage protein 2 OS=Sesamum indicum PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.1e-15 Identity = 87/412 (21.12%), Postives = 174/412 (42.23%), Query Frame = 1
BLAST of CmoCh16G004060 vs. Swiss-Prot
Match: 13SB_FAGES (13S globulin basic chain OS=Fagopyrum esculentum PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.7e-14 Identity = 45/133 (33.83%), Postives = 72/133 (54.14%), Query Frame = 1
BLAST of CmoCh16G004060 vs. Swiss-Prot
Match: GLUB1_ORYSJ (Glutelin type-B 1 OS=Oryza sativa subsp. japonica GN=GluB1-A PE=2 SV=3) HSP 1 Score: 79.0 bits (193), Expect = 1.4e-13 Identity = 44/140 (31.43%), Postives = 79/140 (56.43%), Query Frame = 1
BLAST of CmoCh16G004060 vs. TrEMBL
Match: A0A0A0L6K0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G218160 PE=4 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 3.0e-116 Identity = 220/313 (70.29%), Postives = 251/313 (80.19%), Query Frame = 1
BLAST of CmoCh16G004060 vs. TrEMBL
Match: A0A0A0LC21_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G218170 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 1.1e-94 Identity = 183/325 (56.31%), Postives = 235/325 (72.31%), Query Frame = 1
BLAST of CmoCh16G004060 vs. TrEMBL
Match: A0A0A0K550_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G337100 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 6.7e-84 Identity = 172/315 (54.60%), Postives = 218/315 (69.21%), Query Frame = 1
BLAST of CmoCh16G004060 vs. TrEMBL
Match: A0A161JQR4_MEDSA (Hexenal isomerase OS=Medicago sativa GN=MSHI PE=2 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 8.1e-74 Identity = 159/321 (49.53%), Postives = 207/321 (64.49%), Query Frame = 1
BLAST of CmoCh16G004060 vs. TrEMBL
Match: F6H8X0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01950 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 1.5e-72 Identity = 151/319 (47.34%), Postives = 207/319 (64.89%), Query Frame = 1
BLAST of CmoCh16G004060 vs. TAIR10
Match: AT2G28680.1 (AT2G28680.1 RmlC-like cupins superfamily protein) HSP 1 Score: 191.4 bits (485), Expect = 1.1e-48 Identity = 103/273 (37.73%), Postives = 158/273 (57.88%), Query Frame = 1
BLAST of CmoCh16G004060 vs. TAIR10
Match: AT1G07750.1 (AT1G07750.1 RmlC-like cupins superfamily protein) HSP 1 Score: 185.7 bits (470), Expect = 5.8e-47 Identity = 106/302 (35.10%), Postives = 169/302 (55.96%), Query Frame = 1
BLAST of CmoCh16G004060 vs. TAIR10
Match: AT1G03890.1 (AT1G03890.1 RmlC-like cupins superfamily protein) HSP 1 Score: 98.6 bits (244), Expect = 9.3e-21 Identity = 97/390 (24.87%), Postives = 167/390 (42.82%), Query Frame = 1
BLAST of CmoCh16G004060 vs. TAIR10
Match: AT4G28520.1 (AT4G28520.1 cruciferin 3) HSP 1 Score: 69.3 bits (168), Expect = 6.1e-12 Identity = 46/147 (31.29%), Postives = 76/147 (51.70%), Query Frame = 1
BLAST of CmoCh16G004060 vs. TAIR10
Match: AT5G44120.3 (AT5G44120.3 RmlC-like cupins superfamily protein) HSP 1 Score: 63.2 bits (152), Expect = 4.3e-10 Identity = 43/147 (29.25%), Postives = 71/147 (48.30%), Query Frame = 1
BLAST of CmoCh16G004060 vs. NCBI nr
Match: gi|659112129|ref|XP_008456076.1| (PREDICTED: glutelin type-A 2-like [Cucumis melo]) HSP 1 Score: 434.9 bits (1117), Expect = 1.6e-118 Identity = 221/313 (70.61%), Postives = 259/313 (82.75%), Query Frame = 1
BLAST of CmoCh16G004060 vs. NCBI nr
Match: gi|449467587|ref|XP_004151504.1| (PREDICTED: legumin J [Cucumis sativus]) HSP 1 Score: 426.8 bits (1096), Expect = 4.2e-116 Identity = 220/313 (70.29%), Postives = 251/313 (80.19%), Query Frame = 1
BLAST of CmoCh16G004060 vs. NCBI nr
Match: gi|659112131|ref|XP_008456077.1| (PREDICTED: glutelin type-B 2-like [Cucumis melo]) HSP 1 Score: 360.1 bits (923), Expect = 4.9e-96 Identity = 189/325 (58.15%), Postives = 236/325 (72.62%), Query Frame = 1
BLAST of CmoCh16G004060 vs. NCBI nr
Match: gi|700202448|gb|KGN57581.1| (hypothetical protein Csa_3G218170 [Cucumis sativus]) HSP 1 Score: 355.1 bits (910), Expect = 1.6e-94 Identity = 183/325 (56.31%), Postives = 235/325 (72.31%), Query Frame = 1
BLAST of CmoCh16G004060 vs. NCBI nr
Match: gi|778726893|ref|XP_004139714.2| (PREDICTED: glutelin type-A 2-like [Cucumis sativus]) HSP 1 Score: 319.3 bits (817), Expect = 9.5e-84 Identity = 172/315 (54.60%), Postives = 218/315 (69.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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