CmoCh16G003010 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh16G003010
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	MADS-box transcription factor 27
Location	Cmo_Chr16 : 1370498 .. 1380015 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAACTCTCTCTCTCTCCAAGAAGGCTACAAGAAGAAGCAAATCAGCAATAAAAATCGTGTCTTTTTTGCTGTTGTTCTTGAGGTGTGTATGAATTTTGGGTAATTTTTCATCGTTTTTGGATCTGAAAATTGGGTTTTTTGAGGACCCTTTTGGGCATTTGGGGATGGTTTTGGGTTAGAAATTGAAAAGAAAAGAAAAAAAAAATGGGAAGAGGGAAGATAGTGATAAGAAGAATAGACAATTCAACGAGCAGACAAGTGACGTTTTCTAAGAGAAGAAGTGGGTTACTGAAGAAGGCTCGAGAGCTTTCGATTCTTTGTGATGCTGAGGTTGGATTGATCATTTTTTCAAGCACTGGGAAGCTCTATGACTATTCCAGCTCCAGGTCCGATCCCTTTCTCTCTCTACAATTTCTCTCTCTTTTATTATTTTTCTCTTCATTTTATCATCTGGGTTTCCCTTTTTTTCTTTTTAAAATCCATTATTTGTGTTTTTCTTGTGTAATTTTATGATTTATTAACAAAATTCTGGTATCCAAGATCGTAACTTTGAAGCAGTATAGCTTATAAAAAAAAAAGGCTTGAAATTTATGGTTTTAATTAGAAGAGGATTATCAAAATCTAAAGATTGAATTTTTCTGCACGTAAATTTATTTTTACTTTTTTAATTTTGCATGGGATTATCTTATATGTTGATATTATGAATCCATTTATTTCATTTCTGCTGTAATTTATACTTTTTTTTGTTTTTTTTTTTTAATATTAATGTTCTTTTTTTGGGATTGAAATTTTGTTTTAAGGATTAATGGTTTGAGATTTCACATAATTGTCGTTGGTTGAATGTTTTGTTCGTATTTTTTGATTTGTAAATTGTTGGAAACATGTAATGTGATTTAGATTCTTATTATCTTTGCCTATATTTTTTTTTAGGGTTTGTGTTTGCTTTCTCCTTTTTGTTTTATAATATTTGTTTCTCGAATTCTATATTTTTTTTTCTCGTACTTTATCTCGTGACCCTTTAAATTCTCTGAGTAAGGTTTAATGAAACAATTTTTTTATAAATTTTTCTTATAAAATTCTCTATTTATGTATTATTTCATTGCCTATTTTACAAAAATTTATAAGGAGCTGAATTTTGGCAATGAAATATACATTTTTGAAGCACGTTCTACATCAAATTTAAATATGCATACACGTTTTTCGTTCATAATGATTAGAATCATCTTTTCTTAGTATTTGTGTTTTTCAGTAAGTTTTAAAAAAATATAAATAAAAAAATGGAGATTAAGTAGTAAAAAGGAAAATAAAATAAAAAATAGTTCGAAAATAAGTATTTACCAATTAAAGAAAAATCAATATGAAAGCTTATTTGTGTTCTTTGATAGTTTTTTTTTTTTCATTTATATTTAAAATTATAAAACTAATTGATAGTTTTCTTTTACATACAAGTACTGTGCTTTTGTAATTAAATATATTTTATATATTTATAAAAATAAATTTAGAGTTTTTATATCAATATTTACTTTGAGAAATGAAAGTAATTAAACTATGACATAGTAAGATGTTAAGTTGAATTGATATTAGGGTTGAAAATTTTGTGCTGAAAATTAAGAATTATTATTATTATTTTTTTTCATTTTAACTAAGATTTAAGACTTAAATAATTACACTTTCACTTAATATGTTATTCTCTTAGCTTCAAACATATATATTTTTCACCTTTAATAATAAATAGATAATTTTGAATAAATAAAAATTACAATCATTGAGCCTTCCCTCAAATAGTCATCTATTCATCTAGCGATAATTCCTAGAAGACTTGCAACTTCTTTGTTTGATATTTAAGATTCTATCGACATGGCTCAGAGAAGATAAGAGCATGACGATACTTAATAGAACACGACTTTCATAATAGTATGATATTGTCTACTTTGAGTATAAACTTTCATAACTGTGTTTTTTATTTTTCTAAAAAGTCTCAAACTAATGGAGATAGTGCTTGTGATCTTATGTGAAACTTCAACAATTCTCAACAAATTTAGACTGAAAATTCAATCTACAAGTTCAAGACAATTATTACATAATTGAAATATATATCATGCTTGTAAGTCTACTGACTTAACCATGTTCAAGAATTATGTTCAAGGATTAAGCTAATATTTTAACCCTAATTGTATATGTCATTCCCTATAATAATATTCAGATGTTCAAATGTTTGAACTTAGACATGCATGAAAGCTTAAATCAAAGTTTCACACAAATTATTCATTGTGGCCAACAATGTATACATAGTAGATTAAGATCTACACGCTCTCTAGTAACTATCATGTATAAATTTGAAATATCTCTCTTAAGATTTTAAGTGTGAAATTGTCAACCACTTGGCAGCCGCCCCAGGCGGTCGTTTGTCATCGTAAAGTAGTCCCCGCGAAGCTTTCAGGAGGAAGAGTAGTCTTGTGTGTAAGAATAGCACTTCTGGTCGAATCTGCCCGACCGAAGAACAAAACCTTAGCCCCAAATGGCAAAAAAGAGTGAGCCAAAAAGAAAAACATTGACCATACTCACTGATCCTCAACCATAGAATTACCAGAAGTTTGGTAGAAACAAGACAACGCCTTTGAAGCAAAAAGGGCAAAGCCACAGTTGGTTGTTTAAGTCCTTCACATCACATCTGTGCATAGAACAACCAGAGTATGTTAGGGTAGCATTTTTTTTATAATGTTAAAACATAACTCATGAGAAATTTCTTCCTTAAGATCCCCCATAAAAATATGCTATAGATATGAGTCATGGCCCTTCTTTAACAGCGCCACAACGTCGTTTGTATTCTCGTAAATCATCTTATTTGAGGAACTATCATATGGAACAAGGTATTCTGTAACTATATGTTTGGAAGAAAATTAGAGGATCATCTCAACTCCACTGCAGTTTCTAGTTCTACATTTCATATTGGATAAAGACATATCAAATGATGCTCCCCCTAAATAAGGTTATGGACAAGAGTCAAAGCAAAGCCATGTGATAAGAAAGTTGGTTCAACGCAAGTACATTAAAAACATGGTTTTAGAAACTGAAAGGTTTGCATGAGGGAGGAAACAGTAGAAGATAAAATTAAAATGAAAGATAATGATGAGTATTACTAGGATACAAGATGGAGGATAAATGTTTTCGAGAAGAAAAGTCATGAAATATGGAAAGAAATGTTTGTAGAGTGAAATAAATCACGGTCTTTCTATATCCATGCGTGTTTGAGTCAACGTACATGCACCTCGACTACTCTTATTAGATAAGAGATTGACCCTATGACCCTATTTCATTTAGATGCCAAGAAAATTTGTAAGATATAAAATTCTAGGTAGTTAGCAGGCTGTTTATTATAGGCCAACCCATGATGGATGTGAAAGAAACCACAACTAAGAGAGAGAATAGAAAAGAAACAAGAAAATAGAGTAACCAAAATAGTCTTTAGCATATTCCGTTTATATCTATTGTTGCTGAATTTTCTCTCTTTCGTTTCTAAATACAAATGACAGATTGAAACGATGTTTGTACCTATATATAATTGCAACATAGAACTTGTACTAGATATTTCCTTGACCTATCAGCCATGAAAACACAAGGCACCGTTCCTATGTTCTGAGACAACACCGTGAACTATCACAGCCCTCTAGCAACAAAACAGATCAGAACCCTTCCCACAAACTACTGCCTAAAGTGGGACTAAGTTGGGAAAACTCCAACAATCCATGTTCATAATATAATGTCTTTGTCAGGAGTTCCATGATTTGTGAAAGTGCACGAGCAGGTATCATTGCTTTTTAGGTAGAATTTGAGTTATTCTTTCTAATCTAAAATCTTATGTGAAGATATGAAGAGTTTGGATGAATGTCAATGAAAACACGCAAATTCAGTGGATTTATACAACTCTCTTATCTTTTTCTCGGTAAATAGGTATTTGTTTCTTTCTGCTCCATTGGTAAATAGGTATTTGTCTCTTATCTTTCATTCGGTAAATAAATAGGCTGAGATTACCTATGGTCTCACAGCTAGATTTTCTCCTCCTCTTTCTCTACTCTCTCCTTATTATCAAGTAAAGACTCCTTATGAAGCTTTGCTCCCTTTTGGGTCAGAAAGGGGTAGAGGACCAAAATAAACCAATAACTCTATGTCAAGCAATAAGCAGACTATTATTGGTAACTCACGTATTGATGTTTATGATGTTTCATGGAATGGCATGGCACTCAAAAATTCCAGATTTGCTTTCAAGAGTGTGATTATGTACTGAATAATCTAATAGTTTCTATCTAATCAGCATAAGGTCAATTACTGATCGCTACAACAAGATGAAAGAGGAGCAAAATCAGTTGATGAACCCTGTTTCAGAACTCCAGGTAATCTTTCTTCGTTCATCTGCAATGGCAATTTCCTCGTTAACATGAACATCTGCATGTTTGCTGTACTTTGAATGAAGCACAAATTTTGAATAGAGTTTCCAACCAATACATTGAGACAACTATGTTCCTCAAAGATGATATTTTTCCAAGGTGAAATTCGATGGCTTGGATCATAAGATGGTACTCCATAGGTTATGCCTCAGTGAGAAGCAAAATAACGACGATGGGGATGATAAAGTGAGAAAAAAGGCCAAAGACATTAAGAAAATAACTTCTGTGACAGACTCTCGATCCCTGCTGCAACATAATTAGAGAACTTGTTTGTGTTGTGATCTTCAAAACGTTTATGAAAATTGGATCCATATGAATTAACGATATGCTTCCTTAGGCAATTACACAAGGAGATAAGAAGGGGGGCAGTAAGGAGAGTAAGGAGATATCGAGTGGGGGAAGTAGTAAGAAGGAAGAGATAAAGGGCAGGACCCATGTAACCATCTGAGAAGCGTTTAAGTTGTTTGAAAAGAAAAAACGTGAAGTGTTTTAGTAGTTGAGGGCAGTGGAGAAAGGGGAAAGAGTTAGAAGGTTATTCTTTTGGGAGTAAGAGGAGCTCTAGATTTCTCCTAAATTGTACTTCACTATTGCTCAGAAATGAACCTTCTTTTAATCTTATGGAAGTTGTATGAGAGAAGTGAGTTTGTCGAAGAATGATGGAAAATAAAAAGATGGAGAATCAAAATAACGCTGTGGTTGAAAGTTTTCCAAAGTTGAGGAAATTTTCCTTGGTTTAGGGAGGTTTATTATTTCGACTTTATTAACGGAACCTCTACTATGTCCTTGGCCCTAATTAATGTATTTTGTGAAAATAAGCTATGGACTTGAACGACCTTTTGTGACTTCTCCTTTTGGCTTCCAAACCTTCTCAGGCATCAATGGTGTTGAGATTTTAATTTTTTGAATATCCACGAGTGTGTGTTAGTTTGCACATTAGTCGCCAAAACAGCTTACATATGATATTAAACAGCTTGTAGGTTATAGTGGTAAGTGACCATTATAGCTTAAGCTCATTTCCTCTAAGTTGATTACTATTTATAATATTCCTTATTGACCACTAGATCAACCAGAGGTGGTTGAGAATATGTATAAAAGATTAAATATATCATAACCCATCGACTTAAGTTTTACAGTTCAATGGTAATTCAACAGTCTTAGAGGACGAAGTCCAATGTACTTTGCAACATTGTTTCCTCTCTAATTGATATCAACCTATTCTAAGCTTTTGGAGTTTAGTGTTAGTAATGATTTAATGGACAGATATGTTTTCCTTTTTCCTCACTTGCCCTTGTTCTTGATGGTTAGCAGTTAGGACTACTTGTAAACTATACCTAGTGTTCCTGTTTATTATGTGATCCCTGTGTCTTGGGTGGGTTGGTCTGGCCTTTCTTTTCATTTTTTTAAGTCTACACAATCCCCAAGGCTCAAATCTAGAGACATCAACGGTTTTTCCTTCTTTATACTTTCACTTATAAAAGAAGGAAACAATGTGGCATAATAAAACCCCTATGATGTAAACTTATCAACCTTGGAAGCACCAAGAAATCTCAAAACAAAATACTTCCAATAATAATGTGTAGGAGCACATTGAGATTAAAGGTACCACTGCAAGAGTTATTTAAAATCATGGATGTAGACTATAGCCCAGAATAGGACTGACAGAAAAAATAAATCCATTTACCCCAAAATCAGTAAGTACAGCACATAAATAATAGTTTCTTATGCCTTTACAATGTTTTTATTACTTGGTTGAAATATATCCCTTTTGATTCAAAATGAAGTAAAGTCATGCATTCCAAATAAATTAGTTAAAATCATTCGAATGGTTCAACATACCTATGCCACAAGTAATACTGTAATGCTGACCATCTGTTCTACAATTGTTAGTTTTGGAAAAGAGAGGCAGCTGGTTTGAAGCAACAGCTGCATTACATGCAAGAATGTCACAGGTACTCCAACTCTTGCTGTGCTCTATATGTTATACAAGGGAAAAAAAATCAGCCAAAGATGTTTAAGGAGAGTAAATATTAATATATGTTCAACAATTGCTACATTTAAGTCCTCAGTGCTATATCTCATCAGAAAGTTGCTGAGGAATCCCAATCTCCAATTGTAGATTCAAATGACAAATATAAACGATGCCTGAGTAGAAATTAGTAAAAGTCCTTGAAAATGAATTTCTGTAAGAAGATCATGTTCCACCGAACAAAAGTAATTAAAAAAATTAGGTGTTATATTAACTTATTTTGCAAAATGAAAATCAATGAAACTTTGACTAGAGGTCCTAAATTTTATCATTCTGAAAACAGAAATTAACAATATTGACATGCTTTTTAAAGACAATATTCCAACGCAAAAAAATTCTCAAATAAATACTATTAATGACATTTCAGCCTAGACACTTGCTATTATATCAAAGTGGGCAAAACCCAAGTGATCCTCTATTTCACAGGTCATTCACAGAAAACCAATGTTCTTAACAATCCAGTGCCGAAATATTATACGATGAATGAGAAAAATGGCAATGTTAATTTAGGAGCTAAAAAGATCCCTACCAAAAAGTTATGAGATAAAAAGATAGGTGTTTCTTTCTACTACAAAGGCTAAAATCCTTACAATCCAAAGAATCAAATAAATGATTGACAACATGCACATAGGCATCAATAATTGCATATGTTCTGACCCCTTGGTCGAGAGCATATGCCTTAAAAAGTTGAACTATGCGTAAGTTGACTAAAATTTTAGAACTTTATATTCAGAGGGTAAGAGTAACAATAGAATTTTTAGAGAAAGGGAGAAAACTTGGGAAGAAGTTTGGTTAGTAGGTTTCATACCTCTCTACGAGCCCAGTTAGTTAATATTGTTGTAATTACCTTCTACAATTATTTTACTTGAGTGGAGCCCCTTATTATTTTTGTTTGTCTCCCTATGGAGGTTGATTTTTTTTATAAAAAAAAATTCCCCCATACTATTTCATTTTTGCTCAATGAAAGAATGATTTCTCAGCATATACTAGCCTATCAGTATCATAGGGCTCTAAATCCACTTTCAATTGTCAGTGCTAGAATAACTTTGTGGTAAGTGATAATTTCATAACATATTTTAAGCATGAGTGGTAGGCATCACACAATCCTTAGTTCTGTACAATTTAAACTGATCATTTGATTATCATGATAAAAGGTGGATGGAGTACTTAAAATTTTACCAACACCATAAGTTGCCATCCATGCTCTATACCATAATTAAGACATGCTAACGACTGGGATAAATTAAAACAATTCAAGTCTGAATCTGTAGGGAATGGTAAAATAATTCAACATTGTACGCAAATGTGCAAAGGAATTCCTAACATATCCACGCTTCTATATTTGCAGACAATTAATGGGTGAAGAACTATCTGGCCTGAGTGTCAAAGATCTACAAAATCTGGAAAGCCAGTTGGAGATGAGTTTGAAAGGTGTCCGTGTGAAAAAGGTATAAACTATGAAGAGAGCTCAATAAAACATACACTGTATACGGATGTTTATGTGTTTTTGTATTTGTCTTGCAGGAAAAGATTTTAAGCGAGGAAATTACTCAACTAAGACAGAAGGTTCCCCCCACTGTAAACATCCATGTATCTCATTATGCCAAGAAGTGCTGTAACAACAGCTAAATTGCAATAATTATCTTGCAGGGGAATCAAATGCATCAAGAAAATCTGGAACTCTACAAGAAATTAGATATGATTCGTAAGGAAAATGCAGAACTGCAAATGAAGGTAGAGATACATATGTTGAAATGCTACTTTTTCTTTTTTAATTGTAAAAAACGGAACTTTAATTGAGAAAAATGAAAGGGCATAAAATACAAACCCACAAAAAAAGAAGCCCAATCACTAACTAAAGAAACAAATAACAATCCAAAGAGGATTCATAGGCCAGGTAATAGATGCTCAAATGGACTCGTTATACCTAACAAACACCAAAACCTCCTCTGAAGATCTCTCGACATCCCTAAAAACTCTGTTACTTATTTCAATCCAAATCCCCCTCAACAAGGCAAAGAAACAAGACAGCCACAAAAATCTTCCTTTATCCTAAAACAGGGGATTCAAGAGCCCTCCACAATCGTGGGGCTGCGCTCTCTACCACGAGCCAAACATAGGCCAGATGTTATTGAAATGCTTCATTGTCAACTTTTTCACAAGCCTTTCTTAGTTATAAGAATTATAAGAATTCAGAAGTTATTCTTACAGCTTATTTTTAACCGATCAGGATAATTTTTGGGTTTCTTCCATGCACCATTCTTTCTTGTTTTCCCTTTTCTTTGCTTATATATATATATATATATACACTTTTGGGTGGGGAGTGGGTTATGGGTGGGAGAGGGAGAGGGAGAGGGAGAGGCGGATTGCTGACACTGGAAAGGGACTTATTTTCCTGTTAAATAAGCTTGACTGTGCGTTTTTTAAGTATCAGGTCTATGGACCAATGGAAGTGGATAAAACGAGCAGTAGCACAGTTCATCAATTCACTTTCGCCAATAGATACGCTATGCCTGCTCCCGTCCATCTACAGCTAAGACAGCCACAACCACAAAACAACGAAACATCAGTACCAGGGATAAAGCTGGGGTATGTTCTAGCAAACTGTGTCATGACATGAATTAAATTGCATATCACTTTCATCTGAATTTCAACCTATACTACACAACTTTTACTCCCAGGCCACACTGAAATAGATTTATTGAAACTTGTAACAGATTACAACTGCAATAACAGCATTTGAATCATGGATGATTTGTCCATGGTCATTTCACCAACTTGTCATAAAGTACGCTCATGTTCAACATCAAGGTGTCTCCTGCTTCAGTCACTAGTGCATTAACATCACCAGATCCATCACATTTGGTATGCAATTTTCTTCAAACACTATATATGTGATAAACTTAGCAGCCAGACCAGCTACCTATGTAAGTTTACCCATAATGACAATGCATCATATGTGCCATGCGTTGTTCTACCTGTTCTTATAGTTTGTTGTGTTAATTAATTAGACCAGACTCTGAAGTTGTGATGCCAATTAGCTGA

mRNA sequence

CTTAACTCTCTCTCTCTCCAAGAAGGCTACAAGAAGAAGCAAATCAGCAATAAAAATCGTGTCTTTTTTGCTGTTGTTCTTGAGGTGTGTATGAATTTTGGGTAATTTTTCATCGTTTTTGGATCTGAAAATTGGGTTTTTTGAGGACCCTTTTGGGCATTTGGGGATGGTTTTGGGTTAGAAATTGAAAAGAAAAGAAAAAAAAAATGGGAAGAGGGAAGATAGTGATAAGAAGAATAGACAATTCAACGAGCAGACAAGTGACGTTTTCTAAGAGAAGAAGTGGGTTACTGAAGAAGGCTCGAGAGCTTTCGATTCTTTGTGATGCTGAGGTTGGATTGATCATTTTTTCAAGCACTGGGAAGCTCTATGACTATTCCAGCTCCAGCATAAGGTCAATTACTGATCGCTACAACAAGATGAAAGAGGAGCAAAATCAGTTGATGAACCCTGTTTCAGAACTCCAGTTTTGGAAAAGAGAGGCAGCTGGTTTGAAGCAACAGCTGCATTACATGCAAGAATGTCACAGACAATTAATGGGTGAAGAACTATCTGGCCTGAGTGTCAAAGATCTACAAAATCTGGAAAGCCAGTTGGAGATGAGTTTGAAAGGTGTCCGTGTGAAAAAGGAAAAGATTTTAAGCGAGGAAATTACTCAACTAAGACAGAAGGTCTATGGACCAATGGAAGTGGATAAAACGAGCAGTAGCACAGTTCATCAATTCACTTTCGCCAATAGATACGCTATGCCTGCTCCCGTCCATCTACAGCTAAGACAGCCACAACCACAAAACAACGAAACATCAGTACCAGGGATAAAGCTGGGACCAGACTCTGAAGTTGTGATGCCAATTAGCTGA

Coding sequence (CDS)

ATGGGAAGAGGGAAGATAGTGATAAGAAGAATAGACAATTCAACGAGCAGACAAGTGACGTTTTCTAAGAGAAGAAGTGGGTTACTGAAGAAGGCTCGAGAGCTTTCGATTCTTTGTGATGCTGAGGTTGGATTGATCATTTTTTCAAGCACTGGGAAGCTCTATGACTATTCCAGCTCCAGCATAAGGTCAATTACTGATCGCTACAACAAGATGAAAGAGGAGCAAAATCAGTTGATGAACCCTGTTTCAGAACTCCAGTTTTGGAAAAGAGAGGCAGCTGGTTTGAAGCAACAGCTGCATTACATGCAAGAATGTCACAGACAATTAATGGGTGAAGAACTATCTGGCCTGAGTGTCAAAGATCTACAAAATCTGGAAAGCCAGTTGGAGATGAGTTTGAAAGGTGTCCGTGTGAAAAAGGAAAAGATTTTAAGCGAGGAAATTACTCAACTAAGACAGAAGGTCTATGGACCAATGGAAGTGGATAAAACGAGCAGTAGCACAGTTCATCAATTCACTTTCGCCAATAGATACGCTATGCCTGCTCCCGTCCATCTACAGCTAAGACAGCCACAACCACAAAACAACGAAACATCAGTACCAGGGATAAAGCTGGGACCAGACTCTGAAGTTGTGATGCCAATTAGCTGA

Homology

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BLAST of CmoCh16G003010 vs. Swiss-Prot
Match: ANR1_ARATH (MADS-box transcription factor ANR1 OS=Arabidopsis thaliana GN=ANR1 PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 7.0e-57
Identity = 113/156 (72.44%), Postives = 141/156 (90.38%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSS- 60
           MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKA+ELSILCDAEVG+IIFSSTGKLYDY+S 
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASN 60

Query: 61  SSIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLS 120
           SS+++I +RYN++KEEQ+QL+N  SE++FW+RE A L+QQL Y+QECHR+L+GEELSG++
Sbjct: 61  SSMKTIIERYNRVKEEQHQLLNHASEIKFWQREVASLQQQLQYLQECHRKLVGEELSGMN 120

Query: 121 VKDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQK 156
             DLQNLE QL  SLKGVR+KK+++++ EI +L +K
Sbjct: 121 ANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRK 156

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BLAST of CmoCh16G003010 vs. Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 7.7e-56
Identity = 108/155 (69.68%), Postives = 142/155 (91.61%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60
           MGRGKIVI+RID+STSRQVTFSKRR GL+KKA+EL+ILCDAEVGLIIFSSTGKLYD++SS
Sbjct: 1   MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60

Query: 61  SIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSV 120
           S++S+ DRYNK K EQ QL+NP SE++FW+REAA L+Q+LH +QE HRQ+MGE+L+GLSV
Sbjct: 61  SMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSV 120

Query: 121 KDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQK 156
            +L +LE+Q+E+SL+G+R++KE++L++EI +L QK
Sbjct: 121 NELNSLENQIEISLRGIRMRKEQLLTQEIQELSQK 155

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BLAST of CmoCh16G003010 vs. Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2)

HSP 1 Score: 215.7 bits (548), Expect = 5.0e-55
Identity = 109/155 (70.32%), Postives = 138/155 (89.03%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60
           MGRGKIVIRRIDNSTSRQVTFSKRR+G+ KKA+EL+ILCDAEVGL+IFSSTG+LY+YSS+
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 60

Query: 61  SIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSV 120
           S++S+ DRY K K+EQ  + NP SEL+FW+REAA L+QQLH +QE HRQLMGE+LSGL+V
Sbjct: 61  SMKSVIDRYGKSKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNV 120

Query: 121 KDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQK 156
           K+LQ+LE+QLE+SL+ VR KK+ +L +EI +L +K
Sbjct: 121 KELQSLENQLEISLRSVRTKKDHVLIDEIHELNRK 155

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BLAST of CmoCh16G003010 vs. Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-52
Identity = 103/156 (66.03%), Postives = 136/156 (87.18%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60
           MGRGKI I+RIDN+TSRQVTFSKRRSGL KKARELSILCDAEVGL++FSST +LYD++SS
Sbjct: 1   MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS 60

Query: 61  SIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSV 120
           S++SI +RYN+ KE+ +Q MN  SE + W++EAA L+QQLH +QE HRQL+G++LSGL V
Sbjct: 61  SMKSIIERYNETKEDPHQTMNASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDV 120

Query: 121 KDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQKV 157
           +DLQNLES+LEMSLK +R++K+ ++ ++I +L +KV
Sbjct: 121 EDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRKV 156

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BLAST of CmoCh16G003010 vs. Swiss-Prot
Match: AGL16_ARATH (Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana GN=AGL16 PE=1 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 8.8e-52
Identity = 106/155 (68.39%), Postives = 137/155 (88.39%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60
           MGRGKI I+RI+NSTSRQVTFSKRR+GLLKKA+EL+ILCDAEVG+IIFSSTG+LYD+SSS
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  SIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSV 120
           S++S+ +RY+  K E +   +P SE+QFW++EAA LK+QLH +QE HRQ+MGEELSGLSV
Sbjct: 61  SMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSV 120

Query: 121 KDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQK 156
           + LQNLE+QLE+SL+GVR+KK+++L EEI  L ++
Sbjct: 121 EALQNLENQLELSLRGVRMKKDQMLIEEIQVLNRE 155

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BLAST of CmoCh16G003010 vs. TrEMBL
Match: A0A0D2ST39_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G018100 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 8.0e-68
Identity = 141/221 (63.80%), Postives = 173/221 (78.28%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60
           MGRGKIVIRRIDNSTSRQVTFSKRR+GLLKKARELSILCDAEVGLIIFSSTGKLYDY+SS
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGLIIFSSTGKLYDYASS 60

Query: 61  SIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSV 120
           S++S+ +RYNK+KEE +QL+NP S+++FW+REAA L+QQL Y+Q+ HRQLMGEELSGLSV
Sbjct: 61  SMKSVIERYNKVKEEHHQLLNPDSQVKFWQREAASLRQQLQYLQDYHRQLMGEELSGLSV 120

Query: 121 KDLQNLESQLEMSLKGVRVKKEKILSEE--------------ITQLRQKVYGPMEVDKTS 180
           KDLQ+LE+QLE+SLKGVR KK  ++ +E               T+L++K+YG  E ++ S
Sbjct: 121 KDLQHLENQLEVSLKGVRTKKGHLIHQENLELYKKVDLIHQQNTELQKKIYGTREANEAS 180

Query: 181 SSTVHQFTFANRYAMPAPVHLQLRQPQPQNNETSVPGIKLG 208
             +   +TF N Y + APV LQL QPQP  N      +KLG
Sbjct: 181 RISHSNYTFNNGYDLHAPVRLQLSQPQPPKNNAPAKSMKLG 221

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BLAST of CmoCh16G003010 vs. TrEMBL
Match: A0A0D4ZYJ6_PYRPY (AGL17-like MADS-box protein OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.7e-65
Identity = 140/240 (58.33%), Postives = 175/240 (72.92%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60
           MGRGKIVIRRIDNSTSRQVTFSKRR+GLLKKA+ELSILCDAEVGLIIFSSTG+LYDY+S+
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIIFSSTGRLYDYAST 60

Query: 61  SIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSV 120
           S++S+ DR+NK+K E ++L+NP +E++FW+REAA L+QQL Y++ECHRQLMGEELSGLSV
Sbjct: 61  SMKSVIDRFNKLKAEHHRLLNPAAEVKFWQREAASLRQQLQYLEECHRQLMGEELSGLSV 120

Query: 121 KDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQ-------------------------- 180
           KDLQNLESQLEMSLKGVR KK +I ++EI +L Q                          
Sbjct: 121 KDLQNLESQLEMSLKGVRTKKNQIFNDEIKELNQKEIFIHQENIELYKKLNLISKENEEL 180

Query: 181 --KVYGPMEVDKTSSSTVHQFTFANRYAMPAPVHLQLRQPQ--------PQNNETSVPGI 205
             KVY   +V++ + S+   ++ +N Y + AP+HLQL QPQ        P+NNE     I
Sbjct: 181 QKKVYEARDVNRGNKSSQPPYSISNDYDLHAPIHLQLSQPQNQTQPGPGPKNNEVPARAI 240

[Close]

BLAST of CmoCh16G003010 vs. TrEMBL
Match: A0A0D2R788_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G018100 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.7e-65
Identity = 141/235 (60.00%), Postives = 175/235 (74.47%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60
           MGRGKIVIRRIDNSTSRQVTFSKRR+GLLKKARELSILCDAEVGLIIFSSTGKLYDY+SS
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGLIIFSSTGKLYDYASS 60

Query: 61  SIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSV 120
           S++S+ +RYNK+KEE +QL+NP S+++FW+REAA L+QQL Y+Q+ HRQLMGEELSGLSV
Sbjct: 61  SMKSVIERYNKVKEEHHQLLNPDSQVKFWQREAASLRQQLQYLQDYHRQLMGEELSGLSV 120

Query: 121 KDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQK----------VYGPMEVDKTSSSTV 180
           KDLQ+LE+QLE+SLKGVR KKE+IL++EI +L  K          +Y  +++    ++ +
Sbjct: 121 KDLQHLENQLEVSLKGVRTKKEQILTDEIKELNHKGHLIHQENLELYKKVDLIHQQNTEL 180

Query: 181 HQ------------------FTFANRYAMPAPVHLQLRQPQPQNNETSVPGIKLG 208
            +                  +TF N Y + APV LQL QPQP  N      +KLG
Sbjct: 181 QKKIYGTREANEASRISHSNYTFNNGYDLHAPVRLQLSQPQPPKNNAPAKSMKLG 235

[Close]

BLAST of CmoCh16G003010 vs. TrEMBL
Match: B9RX62_RICCO (Mads box protein, putative OS=Ricinus communis GN=RCOM_0818130 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.9e-65
Identity = 139/235 (59.15%), Postives = 176/235 (74.89%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60
           MGRGKIVIRRIDNSTSRQVTFSKRR+GLLKKARELSILCDAEVG+IIFSST KLYDY+S+
Sbjct: 28  MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGVIIFSSTSKLYDYAST 87

Query: 61  SIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSV 120
           S+ S+ +RYNK+KEEQ QLMNP SE++FW+REAA L+++L Y+QE HRQLMGEELSGLS 
Sbjct: 88  SMNSVIERYNKLKEEQQQLMNPASEIKFWQREAASLRKELQYLQESHRQLMGEELSGLSA 147

Query: 121 KDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQ----------KVYGPMEVDKTSSSTV 180
           KDLQNLE+QLEMSLKGVR+KK++IL++EI +L +          K++  +E+    +  +
Sbjct: 148 KDLQNLENQLEMSLKGVRMKKDQILTDEIRELNRKGNLTYEENLKLHKKVELIYQENVEL 207

Query: 181 HQ------------------FTFANRYAMPAPVHLQLRQPQPQNNETSVPGIKLG 208
            +                  +T +N Y + AP+HLQL QPQP +N+     +KLG
Sbjct: 208 RKKVNEERDVREANKSSHPPYTLSNGYDIHAPIHLQLSQPQPHSNQAPPKPMKLG 262

[Close]

BLAST of CmoCh16G003010 vs. TrEMBL
Match: A0A0R0G677_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G059600 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.9e-65
Identity = 139/235 (59.15%), Postives = 173/235 (73.62%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60
           MGRGKI IRRIDNSTSRQVTFSKRR+GLLKKARELSILCDAEVGL++FSSTGKLYDY+S+
Sbjct: 1   MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGLMVFSSTGKLYDYAST 60

Query: 61  SIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSV 120
           S++S+ +RYNK+KEE + LMNP SE +FW+ EAA L+QQL Y+QECHRQLMGEEL GL +
Sbjct: 61  SMKSVIERYNKLKEEHHHLMNPASEAKFWQTEAASLRQQLQYLQECHRQLMGEELMGLGI 120

Query: 121 KDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQK----------VYGPMEVDKTSSSTV 180
           K+LQ+LE+QLEMSLKGVR+KK++IL+ EI +LRQK          +Y  ME  +  ++ +
Sbjct: 121 KELQSLENQLEMSLKGVRMKKDQILTNEIEELRQKGNLIHQENVELYQKMEQIQKENAEL 180

Query: 181 HQ------------------FTFANRYAMPAPVHLQLRQPQPQNNETSVPGIKLG 208
            +                  +   N Y + AP+ LQL QPQPQ +E S   IKLG
Sbjct: 181 QKKVYEARSTNEENVASNPSYKVRNGYDLHAPISLQLSQPQPQYSEPSAKAIKLG 235

[Close]

BLAST of CmoCh16G003010 vs. TAIR10
Match: AT2G14210.1 (AT2G14210.1 AGAMOUS-like 44)

HSP 1 Score: 221.9 bits (564), Expect = 3.9e-58
Identity = 113/156 (72.44%), Postives = 141/156 (90.38%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSS- 60
           MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKA+ELSILCDAEVG+IIFSSTGKLYDY+S 
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASN 60

Query: 61  SSIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLS 120
           SS+++I +RYN++KEEQ+QL+N  SE++FW+RE A L+QQL Y+QECHR+L+GEELSG++
Sbjct: 61  SSMKTIIERYNRVKEEQHQLLNHASEIKFWQREVASLQQQLQYLQECHRKLVGEELSGMN 120

Query: 121 VKDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQK 156
             DLQNLE QL  SLKGVR+KK+++++ EI +L +K
Sbjct: 121 ANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRK 156

[Close]

BLAST of CmoCh16G003010 vs. TAIR10
Match: AT4G37940.1 (AT4G37940.1 AGAMOUS-like 21)

HSP 1 Score: 218.4 bits (555), Expect = 4.4e-57
Identity = 108/155 (69.68%), Postives = 142/155 (91.61%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60
           MGRGKIVI+RID+STSRQVTFSKRR GL+KKA+EL+ILCDAEVGLIIFSSTGKLYD++SS
Sbjct: 1   MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60

Query: 61  SIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSV 120
           S++S+ DRYNK K EQ QL+NP SE++FW+REAA L+Q+LH +QE HRQ+MGE+L+GLSV
Sbjct: 61  SMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSV 120

Query: 121 KDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQK 156
            +L +LE+Q+E+SL+G+R++KE++L++EI +L QK
Sbjct: 121 NELNSLENQIEISLRGIRMRKEQLLTQEIQELSQK 155

[Close]

BLAST of CmoCh16G003010 vs. TAIR10
Match: AT3G57230.1 (AT3G57230.1 AGAMOUS-like 16)

HSP 1 Score: 204.9 bits (520), Expect = 5.0e-53
Identity = 106/155 (68.39%), Postives = 137/155 (88.39%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60
           MGRGKI I+RI+NSTSRQVTFSKRR+GLLKKA+EL+ILCDAEVG+IIFSSTG+LYD+SSS
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  SIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSV 120
           S++S+ +RY+  K E +   +P SE+QFW++EAA LK+QLH +QE HRQ+MGEELSGLSV
Sbjct: 61  SMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSV 120

Query: 121 KDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQK 156
           + LQNLE+QLE+SL+GVR+KK+++L EEI  L ++
Sbjct: 121 EALQNLENQLELSLRGVRMKKDQMLIEEIQVLNRE 155

[Close]

BLAST of CmoCh16G003010 vs. TAIR10
Match: AT2G22630.1 (AT2G22630.1 AGAMOUS-like 17)

HSP 1 Score: 203.0 bits (515), Expect = 1.9e-52
Identity = 115/224 (51.34%), Postives = 154/224 (68.75%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60
           MGRGKIVI++ID+STSRQVTFSKRR GL+KKA+EL+ILCDAEV LIIFS+T KLYD++SS
Sbjct: 1   MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS 60

Query: 61  SIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSV 120
           S++S  +R+N  K E+ +LMNP SE++FW+REA  L+Q+LH +QE +RQL G EL+GLSV
Sbjct: 61  SVKSTIERFNTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSV 120

Query: 121 KDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQK------------------------V 180
           K+LQN+ESQLEMSL+G+R+K+E+IL+ EI +L +K                        +
Sbjct: 121 KELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRIHQENVEL 180

Query: 181 YGPMEVDKTSSSTVHQFTFANRYAMPAPVHLQLRQPQPQNNETS 201
           Y        ++   H       Y   A V LQL QP+  + +TS
Sbjct: 181 YKKAYGTSNTNGLGHHELVDAVYESHAQVRLQLSQPEQSHYKTS 224

[Close]

BLAST of CmoCh16G003010 vs. TAIR10
Match: AT4G18960.1 (AT4G18960.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 143.7 bits (361), Expect = 1.4e-34
Identity = 87/203 (42.86%), Postives = 132/203 (65.02%), Query Frame = 1


Query: 2   GRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSSS 61
           GRGKI I+RI+N+T+RQVTF KRR+GLLKKA ELS+LCDAEV LI+FSS G+LY+YS++S
Sbjct: 18  GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 77

Query: 62  IRSITDRYNKMKEEQNQLMNPVSEL--QFWKREAAGLKQQLHYMQECHRQLMGEELSGLS 121
           ++   +RY K   + N     V+E+  Q++++E+A L+QQ+  +Q  +RQLMGE +  +S
Sbjct: 78  VKGTIERYKKAISD-NSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMS 137

Query: 122 VKDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQKVYGPMEVDKTSSSTVHQFTFANR- 181
            K+L+NLE +LE S+  +R KK ++L  EI  ++++     EVD  + + + +   A   
Sbjct: 138 PKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKR-----EVDLHNDNQILRAKIAENE 197

Query: 182 ------YAMPAPVHLQLRQPQPQ 196
                   MP   + +   P PQ
Sbjct: 198 RNNPSISLMPGGSNYEQLMPPPQ 214

[Close]

BLAST of CmoCh16G003010 vs. NCBI nr
Match: gi|659108914|ref|XP_008454453.1| (PREDICTED: MADS-box transcription factor 23 isoform X2 [Cucumis melo])

HSP 1 Score: 338.2 bits (866), Expect = 1.1e-89
Identity = 187/235 (79.57%), Postives = 196/235 (83.40%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60
           MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60

Query: 61  SIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSV 120
           SIRSITDRYNKMKEEQNQLMN VSELQFWKREAA LKQQLHY+QECHRQLMGEELSGLSV
Sbjct: 61  SIRSITDRYNKMKEEQNQLMNSVSELQFWKREAAALKQQLHYLQECHRQLMGEELSGLSV 120

Query: 121 KDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQ-------------------------- 180
           KDLQNLESQLEMSLKGVRVKKEKILS+EIT+L+Q                          
Sbjct: 121 KDLQNLESQLEMSLKGVRVKKEKILSDEITELKQKGNHMHQENVELYKKLDLIRKENAEL 180

Query: 181 --KVYGPMEVDKTSSSTVHQFTFANRYAMPAPVHLQLRQPQPQNNETSVPGIKLG 208
             K YGPME+DKTSSS+  QFT  NRY+MP    LQLRQPQPQN+ETS+PGIKLG
Sbjct: 181 QMKAYGPMEIDKTSSSS-QQFTITNRYSMPG---LQLRQPQPQNHETSIPGIKLG 231

[Close]

BLAST of CmoCh16G003010 vs. NCBI nr
Match: gi|659108911|ref|XP_008454452.1| (PREDICTED: MADS-box transcription factor 23 isoform X1 [Cucumis melo])

HSP 1 Score: 337.4 bits (864), Expect = 1.8e-89
Identity = 187/237 (78.90%), Postives = 196/237 (82.70%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60
           MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60

Query: 61  SIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSV 120
           SIRSITDRYNKMKEEQNQLMN VSELQFWKREAA LKQQLHY+QECHRQLMGEELSGLSV
Sbjct: 61  SIRSITDRYNKMKEEQNQLMNSVSELQFWKREAAALKQQLHYLQECHRQLMGEELSGLSV 120

Query: 121 KDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQK------------------------- 180
           KDLQNLESQLEMSLKGVRVKKEKILS+EIT+L+QK                         
Sbjct: 121 KDLQNLESQLEMSLKGVRVKKEKILSDEITELKQKGNHMHQENVELYKKLDLIRKENAEL 180

Query: 181 -----VYGPMEVDKTSSSTVHQFTFANRYAMPAPVHLQLRQPQPQNNETSVPGIKLG 208
                 YGPME+DKTSSS+  QFT  NRY+MP    LQLRQPQPQN+ETS+PGIKLG
Sbjct: 181 QMKYQAYGPMEIDKTSSSS-QQFTITNRYSMPG---LQLRQPQPQNHETSIPGIKLG 233

[Close]

BLAST of CmoCh16G003010 vs. NCBI nr
Match: gi|659108916|ref|XP_008454454.1| (PREDICTED: MADS-box transcription factor 23 isoform X3 [Cucumis melo])

HSP 1 Score: 337.4 bits (864), Expect = 1.8e-89
Identity = 187/237 (78.90%), Postives = 196/237 (82.70%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60
           MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60

Query: 61  SIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSV 120
           SIRSITDRYNKMKEEQNQLMN VSELQFWKREAA LKQQLHY+QECHRQLMGEELSGLSV
Sbjct: 61  SIRSITDRYNKMKEEQNQLMNSVSELQFWKREAAALKQQLHYLQECHRQLMGEELSGLSV 120

Query: 121 KDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQK------------------------- 180
           KDLQNLESQLEMSLKGVRVKKEKILS+EIT+L+QK                         
Sbjct: 121 KDLQNLESQLEMSLKGVRVKKEKILSDEITELKQKGNHMHQENVELYKKLDLIRKENAEL 180

Query: 181 -----VYGPMEVDKTSSSTVHQFTFANRYAMPAPVHLQLRQPQPQNNETSVPGIKLG 208
                 YGPME+DKTSSS+  QFT  NRY+MP    LQLRQPQPQN+ETS+PGIKLG
Sbjct: 181 QMKYQAYGPMEIDKTSSSS-QQFTITNRYSMPG---LQLRQPQPQNHETSIPGIKLG 233

[Close]

BLAST of CmoCh16G003010 vs. NCBI nr
Match: gi|449459616|ref|XP_004147542.1| (PREDICTED: MADS-box transcription factor 23 isoform X2 [Cucumis sativus])

HSP 1 Score: 332.0 bits (850), Expect = 7.7e-88
Identity = 187/235 (79.57%), Postives = 194/235 (82.55%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60
           MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60

Query: 61  SIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSV 120
           SIRSITDRYNKMKEEQNQLMN VSELQFWKREAA LKQQLHY+QECHRQLMGEELSGLSV
Sbjct: 61  SIRSITDRYNKMKEEQNQLMNSVSELQFWKREAAALKQQLHYLQECHRQLMGEELSGLSV 120

Query: 121 KDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQ-------------------------- 180
           KDLQNLESQLEMSLKGVRVKKEK LS+EIT+L+Q                          
Sbjct: 121 KDLQNLESQLEMSLKGVRVKKEKTLSDEITELKQKGNHMHQENVELYKRLDMTRKENAEL 180

Query: 181 --KVYGPMEVDKTSSSTVHQFTFANRYAMPAPVHLQLRQPQPQNNETSVPGIKLG 208
             K YGPME+DKTSSS+  QFT  NRY+MPA   LQLRQPQPQNNET  PGIKLG
Sbjct: 181 QMKAYGPMEIDKTSSSS-QQFTITNRYSMPA---LQLRQPQPQNNET--PGIKLG 229

[Close]

BLAST of CmoCh16G003010 vs. NCBI nr
Match: gi|659108918|ref|XP_008454455.1| (PREDICTED: MADS-box transcription factor 23 isoform X4 [Cucumis melo])

HSP 1 Score: 325.5 bits (833), Expect = 7.2e-86
Identity = 179/223 (80.27%), Postives = 190/223 (85.20%), Query Frame = 1


Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60
           MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSS 60

Query: 61  SIRSITDRYNKMKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSV 120
           SIRSITDRYNKMKEEQNQLMN VSELQFWKREAA LKQQLHY+QECHRQLMGEELSGLSV
Sbjct: 61  SIRSITDRYNKMKEEQNQLMNSVSELQFWKREAAALKQQLHYLQECHRQLMGEELSGLSV 120

Query: 121 KDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQKV----------------YGPMEVDK 180
           KDLQNLESQLEMSLKGVRVKK   + +E  +L +K+                YGPME+DK
Sbjct: 121 KDLQNLESQLEMSLKGVRVKKGNHMHQENVELYKKLDLIRKENAELQMKYQAYGPMEIDK 180

Query: 181 TSSSTVHQFTFANRYAMPAPVHLQLRQPQPQNNETSVPGIKLG 208
           TSSS+  QFT  NRY+MP    LQLRQPQPQN+ETS+PGIKLG
Sbjct: 181 TSSSS-QQFTITNRYSMPG---LQLRQPQPQNHETSIPGIKLG 219

The following BLAST results are available for this feature:

BLAST of CmoCh16G003010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ANR1_ARATH	7.0e-57	72.44	MADS-box transcription factor ANR1 OS=Arabidopsis thaliana GN=ANR1 PE=1 SV=1	[more]
AGL21_ARATH	7.7e-56	69.68	Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1	[more]
MAD27_ORYSJ	5.0e-55	70.32	MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 ...	[more]
MAD23_ORYSJ	1.8e-52	66.03	MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 ...	[more]
AGL16_ARATH	8.8e-52	68.39	Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana GN=AGL16 PE=1 SV=1	[more]

BLAST of CmoCh16G003010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0D2ST39_GOSRA	8.0e-68	63.80	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G018100 PE=4 SV=1	[more]
A0A0D4ZYJ6_PYRPY	1.7e-65	58.33	AGL17-like MADS-box protein OS=Pyrus pyrifolia PE=2 SV=1	[more]
A0A0D2R788_GOSRA	3.7e-65	60.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G018100 PE=4 SV=1	[more]
B9RX62_RICCO	4.9e-65	59.15	Mads box protein, putative OS=Ricinus communis GN=RCOM_0818130 PE=4 SV=1	[more]
A0A0R0G677_SOYBN	4.9e-65	59.15	Uncharacterized protein OS=Glycine max GN=GLYMA_15G059600 PE=4 SV=1	[more]

BLAST of CmoCh16G003010 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14210.1	3.9e-58	72.44	AGAMOUS-like 44	[more]
AT4G37940.1	4.4e-57	69.68	AGAMOUS-like 21	[more]
AT3G57230.1	5.0e-53	68.39	AGAMOUS-like 16	[more]
AT2G22630.1	1.9e-52	51.34	AGAMOUS-like 17	[more]
AT4G18960.1	1.4e-34	42.86	K-box region and MADS-box transcription factor family protein	[more]

BLAST of CmoCh16G003010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659108914\|ref\|XP_008454453.1\|	1.1e-89	79.57	PREDICTED: MADS-box transcription factor 23 isoform X2 [Cucumis melo]	[more]
gi\|659108911\|ref\|XP_008454452.1\|	1.8e-89	78.90	PREDICTED: MADS-box transcription factor 23 isoform X1 [Cucumis melo]	[more]
gi\|659108916\|ref\|XP_008454454.1\|	1.8e-89	78.90	PREDICTED: MADS-box transcription factor 23 isoform X3 [Cucumis melo]	[more]
gi\|449459616\|ref\|XP_004147542.1\|	7.7e-88	79.57	PREDICTED: MADS-box transcription factor 23 isoform X2 [Cucumis sativus]	[more]
gi\|659108918\|ref\|XP_008454455.1\|	7.2e-86	80.27	PREDICTED: MADS-box transcription factor 23 isoform X4 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002100	TF_MADSbox
IPR002487	TF_Kbox

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0046983	protein dimerization activity
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G003010.1	CmoCh16G003010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 38..59 score: 9.1E-29coord: 23..38 score: 9.1E-29coord: 3..23 score: 9.1
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 score: 2.8
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 score: 4.3
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57 scor
IPR002100	Transcription factor, MADS-box	PROFILE	PS50066	MADS_BOX_2	coord: 1..61 score: 31
IPR002100	Transcription factor, MADS-box	unknown	SSF55455	SRF-like	coord: 2..90 score: 4.58
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 84..156 score: 1.9
IPR002487	Transcription factor, K-box	PROFILE	PS51297	K_BOX	coord: 86..179 score: 12
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 2..156 score: 1.8
None	No IPR available	PANTHER	PTHR11945:SF193	SUBFAMILY NOT NAMED	coord: 2..156 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh16G003010	Cucsa.331900	Cucumber (Gy14) v1	cgycmoB0908
CmoCh16G003010	CmaCh16G002810	Cucurbita maxima (Rimu)	cmacmoB322
CmoCh16G003010	CmaCh04G004090	Cucurbita maxima (Rimu)	cmacmoB701
CmoCh16G003010	Cla006477	Watermelon (97103) v1	cmowmB299
CmoCh16G003010	Csa4G181200	Cucumber (Chinese Long) v2	cmocuB327
CmoCh16G003010	MELO3C018049	Melon (DHL92) v3.5.1	cmomeB298
CmoCh16G003010	ClCG10G009840	Watermelon (Charleston Gray)	cmowcgB281
CmoCh16G003010	CSPI04G11770	Wild cucumber (PI 183967)	cmocpiB334
CmoCh16G003010	Lsi03G009820	Bottle gourd (USVL1VR-Ls)	cmolsiB294
CmoCh16G003010	Cp4.1LG14g04940	Cucurbita pepo (Zucchini)	cmocpeB307
CmoCh16G003010	CsaV3_4G014700	Cucumber (Chinese Long) v3	cmocucB0390
CmoCh16G003010	Cla97C10G192870	Watermelon (97103) v2	cmowmbB324
CmoCh16G003010	Bhi11G000877	Wax gourd	cmowgoB0405
CmoCh16G003010	Carg19722	Silver-seed gourd	carcmoB0402
CmoCh16G003010	Carg08086	Silver-seed gourd	carcmoB0509

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh16G003010	CmoCh04G004380	Cucurbita moschata (Rifu)	cmocmoB286

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh16G003010	Watermelon (97103) v2	cmowmbB316
CmoCh16G003010	Cucurbita moschata (Rifu)	cmocmoB096
CmoCh16G003010	Cucurbita maxima (Rimu)	cmacmoB133
CmoCh16G003010	Watermelon (Charleston Gray)	cmowcgB273
CmoCh16G003010	Watermelon (97103) v1	cmowmB287
CmoCh16G003010	Cucurbita pepo (Zucchini)	cmocpeB311
CmoCh16G003010	Cucurbita pepo (Zucchini)	cmocpeB321
CmoCh16G003010	Cucumber (Gy14) v2	cgybcmoB469
CmoCh16G003010	Melon (DHL92) v3.6.1	cmomedB317
CmoCh16G003010	Melon (DHL92) v3.6.1	cmomedB339
CmoCh16G003010	Melon (DHL92) v3.6.1	cmomedB342