CmoCh16G002690 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCGCTTCTTGTACGGAGTCTTGCCTCTTCTCTCTTCGTCTTTGCCGATAAATCCTTCATCAATTTGTCTAAGAAATACATACTCCTCGAGATTATTCACAAACTATTAGTCTCCTCCTTCCTCTTTTTCCTCCGTTTGCTTCCTTCCTTTTTCTCTTCAATCCACCTGGTTCCCGGCGATCGATTCCCTCTAAAACCCTCAAAAAGTGTGTGTTACGGTGGCGGCGGAAACGGAAGCGGAGGCGGCGATTTAGGGATTTCTCGAGCCCTAACGCAATTGTTGTCGATTATCAGTCACATTCCAGTCAGTTCTCGCAAGTACGAAGTGGTTCGATCGTTAGCGGAGAAGTTAATCGACGAGAATCACTGGGAAGGGATTAAGGAACTTCGTGAGGTCAATCGTACGGTTCTTTCCACGGCCTTTAACCGGACAATTGGCCAGATTGAAGCTCGGATGCTAGATTTAGGGTTTTTTCAGGACGATGACGACGAAGACTGTGGCGGCGGGTCCGTGAATGGACCGGCGGAGTTCCGGTTAGGTCAGATTGTGAGGGCGGTTCGGTTTTTGGGAGAGTAG ATGGCTCCGCTTCTTGTACGGAGTCTTGCCTCTTCTCTCTTCGTCTTTGCCGATAAATCCTTCATCAATTTGTCTAAGAAATACATACTCCTCGAGATTATTCACAAACTATTAGTCTCCTCCTTCCTCTTTTTCCTCCGTTTGCTTCCTTCCTTTTTCTCTTCAATCCACCTGGTTCCCGGCGATCGATTCCCTCTAAAACCCTCAAAAAGTGTGTGTTACGGTGGCGGCGGAAACGGAAGCGGAGGCGGCGATTTAGGGATTTCTCGAGCCCTAACGCAATTGTTGTCGATTATCAGTCACATTCCAGTCAGTTCTCGCAAGTACGAAGTGGTTCGATCGTTAGCGGAGAAGTTAATCGACGAGAATCACTGGGAAGGGATTAAGGAACTTCGTGAGGTCAATCGTACGGTTCTTTCCACGGCCTTTAACCGGACAATTGGCCAGATTGAAGCTCGGATGCTAGATTTAGGGTTTTTTCAGGACGATGACGACGAAGACTGTGGCGGCGGGTCCGTGAATGGACCGGCGGAGTTCCGGTTAGGTCAGATTGTGAGGGCGGTTCGGTTTTTGGGAGAGTAG ATGGCTCCGCTTCTTGTACGGAGTCTTGCCTCTTCTCTCTTCGTCTTTGCCGATAAATCCTTCATCAATTTGTCTAAGAAATACATACTCCTCGAGATTATTCACAAACTATTAGTCTCCTCCTTCCTCTTTTTCCTCCGTTTGCTTCCTTCCTTTTTCTCTTCAATCCACCTGGTTCCCGGCGATCGATTCCCTCTAAAACCCTCAAAAAGTGTGTGTTACGGTGGCGGCGGAAACGGAAGCGGAGGCGGCGATTTAGGGATTTCTCGAGCCCTAACGCAATTGTTGTCGATTATCAGTCACATTCCAGTCAGTTCTCGCAAGTACGAAGTGGTTCGATCGTTAGCGGAGAAGTTAATCGACGAGAATCACTGGGAAGGGATTAAGGAACTTCGTGAGGTCAATCGTACGGTTCTTTCCACGGCCTTTAACCGGACAATTGGCCAGATTGAAGCTCGGATGCTAGATTTAGGGTTTTTTCAGGACGATGACGACGAAGACTGTGGCGGCGGGTCCGTGAATGGACCGGCGGAGTTCCGGTTAGGTCAGATTGTGAGGGCGGTTCGGTTTTTGGGAGAGTAG
BLAST of CmoCh16G002690 vs. TrEMBL
Match: A0A0A0KXY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G109030 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 4.2e-68 Identity = 143/195 (73.33%), Postives = 164/195 (84.10%), Query Frame = 1
BLAST of CmoCh16G002690 vs. TrEMBL
Match: B9IJF8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s08030g PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 5.7e-41 Identity = 105/200 (52.50%), Postives = 140/200 (70.00%), Query Frame = 1
BLAST of CmoCh16G002690 vs. TrEMBL
Match: A0A061E161_THECC (Uncharacterized protein isoform 4 (Fragment) OS=Theobroma cacao GN=TCM_007464 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 2.4e-39 Identity = 97/193 (50.26%), Postives = 136/193 (70.47%), Query Frame = 1
BLAST of CmoCh16G002690 vs. TrEMBL
Match: A0A061E933_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_007464 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 2.4e-39 Identity = 97/193 (50.26%), Postives = 136/193 (70.47%), Query Frame = 1
BLAST of CmoCh16G002690 vs. TrEMBL
Match: A0A067EDZ0_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0173162mg PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 1.5e-38 Identity = 102/192 (53.12%), Postives = 137/192 (71.35%), Query Frame = 1
BLAST of CmoCh16G002690 vs. TAIR10
Match: AT5G64230.1 (AT5G64230.1 unknown protein) HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18 Identity = 69/200 (34.50%), Postives = 104/200 (52.00%), Query Frame = 1
BLAST of CmoCh16G002690 vs. TAIR10
Match: AT3G19920.1 (AT3G19920.1 unknown protein) HSP 1 Score: 55.5 bits (132), Expect = 4.3e-08 Identity = 29/85 (34.12%), Postives = 49/85 (57.65%), Query Frame = 1
BLAST of CmoCh16G002690 vs. NCBI nr
Match: gi|659125788|ref|XP_008462861.1| (PREDICTED: uncharacterized protein LOC103501143 [Cucumis melo]) HSP 1 Score: 275.8 bits (704), Expect = 5.8e-71 Identity = 144/195 (73.85%), Postives = 166/195 (85.13%), Query Frame = 1
BLAST of CmoCh16G002690 vs. NCBI nr
Match: gi|449439003|ref|XP_004137277.1| (PREDICTED: uncharacterized protein LOC101222931 [Cucumis sativus]) HSP 1 Score: 265.8 bits (678), Expect = 6.0e-68 Identity = 143/195 (73.33%), Postives = 164/195 (84.10%), Query Frame = 1
BLAST of CmoCh16G002690 vs. NCBI nr
Match: gi|743897147|ref|XP_011041858.1| (PREDICTED: uncharacterized protein LOC105137724 [Populus euphratica]) HSP 1 Score: 177.6 bits (449), Expect = 2.1e-41 Identity = 105/200 (52.50%), Postives = 141/200 (70.50%), Query Frame = 1
BLAST of CmoCh16G002690 vs. NCBI nr
Match: gi|224141233|ref|XP_002323979.1| (hypothetical protein POPTR_0017s08030g [Populus trichocarpa]) HSP 1 Score: 175.6 bits (444), Expect = 8.2e-41 Identity = 105/200 (52.50%), Postives = 140/200 (70.00%), Query Frame = 1
BLAST of CmoCh16G002690 vs. NCBI nr
Match: gi|590688377|ref|XP_007042930.1| (Uncharacterized protein isoform 1 [Theobroma cacao]) HSP 1 Score: 170.2 bits (430), Expect = 3.4e-39 Identity = 97/193 (50.26%), Postives = 136/193 (70.47%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |