CmoCh16G000030 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh16G000030
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTRP-like ion channel pkd2
LocationCmo_Chr16 : 38755 .. 39946 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTAGCAGTTGCATCATTGGATTGGGAGAAGGAAATGGAGAAAAAGATTAGCGACTACATATTGGTGTCATCTGGGCTCGGTGTCATGGTCGCCTATCACGTATGGCTTTTTTATCGGATCGTCAGACATCCCAACAAGACTGTAATTGGCATCAACGCCATCAATCGTCGTTTGTGGGTTCGTGCTATGATGGAGGTCCGATTCAGACCACCATTCTTTTTATTTTTATTTTTTCTTTTCGCCTTCATACTCTGAAACTAAAATTCGAAGTGGTATCAGGATGCGTCAAAGAATGGCGTCCTTGCCGTCCAAACGCTGAGGAACAATATAATGGCGTCCACCCTTTTGGCATCGACGGCTATAATGCTCTGCTCTCTCATGGCCGTCTTAGTGACGAGTGGCGGCCACAGTGAGTCCCCATTAGTGGTACTTGGTGACAAAAGCGTGTTCGGTTTCTCTATCAAGTTCTTCGCCATTTTGGTGTGCTTTTTGGTGGCGTTTTTGTTTAACGTTCAGTCCATCAGGTATTACAGTCATGCAAGCATTCTTATCAATACGCCCTTCAAAAACATTTCAACCCACGCTCACCATCGACGCCTCACGGCTGATTACGTCGCCACCACAGTGAATAGAGGCAGCTATTTCTGGTCCTTAGGATTGCGTGCCTTCTACTTCTCATTTCCTCTACTTTTGTGGATCTTTGGACCTATTCCTATGTTCTCATCTTCCTTTCTCCTTGTTTTTTTGCTTTATTTTCTTGATGTCGCCTTTGAATTCTGTTGGGCTGATGGGAATTTGGATTACGTCCCTCAAAGGGACGAGGAGGAGGAAATTGGGAAATAGATTTCTTTTTCTTTTCCAATGAAACTGACTCTTGTCTTTTTCTAGAGGGTGTCAAGCACGCATTCAATTCTGAGTTTGTTTTTCCTAACAGATGTTCCACCGCATTCCATAAGAGAGGCATGGAGGACGTCTGTCGCTGTTTAATTTATTTGAAATATCTTTGAGGTGCCAAATCCACTGACCTGCACTTGTAACCCACCATCCAACTTTGTGTTCAAGGTCTCTTAAATTTTTTTTATTTTGTTTGAAAAAATAGGAACAAAACAGTGTAGTCTTTTGGAATTGGGTTCATCAGGAGAAACTAAGCGTTTCACATTCTTCTGGAGACCACTTCCGGCATGGCGCCAC

mRNA sequence

CCTAGCAGTTGCATCATTGGATTGGGAGAAGGAAATGGAGAAAAAGATTAGCGACTACATATTGGTGTCATCTGGGCTCGGTGTCATGGTCGCCTATCACGTATGGCTTTTTTATCGGATCGTCAGACATCCCAACAAGACTGTAATTGGCATCAACGCCATCAATCGTCGTTTGTGGGTTCGTGCTATGATGGAGGATGCGTCAAAGAATGGCGTCCTTGCCGTCCAAACGCTGAGGAACAATATAATGGCGTCCACCCTTTTGGCATCGACGGCTATAATGCTCTGCTCTCTCATGGCCGTCTTAGTGACGAGTGGCGGCCACAGTGAGTCCCCATTAGTGGTACTTGGTGACAAAAGCGTGTTCGGTTTCTCTATCAAGTTCTTCGCCATTTTGGTGTGCTTTTTGGTGGCGTTTTTGTTTAACGTTCAGTCCATCAGGTATTACAGTCATGCAAGCATTCTTATCAATACGCCCTTCAAAAACATTTCAACCCACGCTCACCATCGACGCCTCACGGCTGATTACGTCGCCACCACAGTGAATAGAGGCAGCTATTTCTGGTCCTTAGGATTGCGTGCCTTCTACTTCTCATTTCCTCTACTTTTGTGGATCTTTGGACCTATTCCTATGTTCTCATCTTCCTTTCTCCTTGTTTTTTTGCTTTATTTTCTTGATGTCGCCTTTGAATTCTGTTGGGCTGATGGGAATTTGGATTACGTCCCTCAAAGGGACGAGGAGGAGGAAATTGGGAAATAGATTTCTTTTTCTTTTCCAATGAAACTGACTCTTGTCTTTTTCTAGAGGGTGTCAAGCACGCATTCAATTCTGAGTTTGTTTTTCCTAACAGATGTTCCACCGCATTCCATAAGAGAGGCATGGAGGACGTCTGTCGCTGTTTAATTTATTTGAAATATCTTTGAGGTGCCAAATCCACTGACCTGCACTTGTAACCCACCATCCAACTTTGTGTTCAAGGTCTCTTAAATTTTTTTTATTTTGTTTGAAAAAATAGGAACAAAACAGTGTAGTCTTTTGGAATTGGGTTCATCAGGAGAAACTAAGCGTTTCACATTCTTCTGGAGACCACTTCCGGCATGGCGCCAC

Coding sequence (CDS)

ATGGAGAAAAAGATTAGCGACTACATATTGGTGTCATCTGGGCTCGGTGTCATGGTCGCCTATCACGTATGGCTTTTTTATCGGATCGTCAGACATCCCAACAAGACTGTAATTGGCATCAACGCCATCAATCGTCGTTTGTGGGTTCGTGCTATGATGGAGGATGCGTCAAAGAATGGCGTCCTTGCCGTCCAAACGCTGAGGAACAATATAATGGCGTCCACCCTTTTGGCATCGACGGCTATAATGCTCTGCTCTCTCATGGCCGTCTTAGTGACGAGTGGCGGCCACAGTGAGTCCCCATTAGTGGTACTTGGTGACAAAAGCGTGTTCGGTTTCTCTATCAAGTTCTTCGCCATTTTGGTGTGCTTTTTGGTGGCGTTTTTGTTTAACGTTCAGTCCATCAGGTATTACAGTCATGCAAGCATTCTTATCAATACGCCCTTCAAAAACATTTCAACCCACGCTCACCATCGACGCCTCACGGCTGATTACGTCGCCACCACAGTGAATAGAGGCAGCTATTTCTGGTCCTTAGGATTGCGTGCCTTCTACTTCTCATTTCCTCTACTTTTGTGGATCTTTGGACCTATTCCTATGTTCTCATCTTCCTTTCTCCTTGTTTTTTTGCTTTATTTTCTTGATGTCGCCTTTGAATTCTGTTGGGCTGATGGGAATTTGGATTACGTCCCTCAAAGGGACGAGGAGGAGGAAATTGGGAAATAG
Homology
[Close]
BLAST of CmoCh16G000030 vs. TrEMBL
Match: A0A0A0LEH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G809950 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 2.2e-106
Identity = 199/241 (82.57%), Postives = 217/241 (90.04%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           MEK+I DY L++SG+ VMV YH+WL  RI+++PNKTVIGINAINRR WVRAMMEDASKNG
Sbjct: 1   MEKEIVDYTLIASGVSVMVGYHIWLLIRILKYPNKTVIGINAINRRYWVRAMMEDASKNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           VLAVQTLRNNIMASTLLASTAIMLCSL+AVL+TSGG SESPLVVL ++S F FSIKFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGRSESPLVVLNERSQFSFSIKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNISTHAHHRRLTADYVATTVNRGSYFWSLG 180
           L+CFLVAFLFNVQSIRYYSHASILINTPFK I    HH+RLT +YVA TVNRGSYFWSLG
Sbjct: 121 LLCFLVAFLFNVQSIRYYSHASILINTPFKKIRVDGHHQRLTTEYVAATVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSFLLVFLLYFLDVAFEFCWADGNLDYVPQRDEEEEIG 240
           LRAFYFSFPL LWIFGPIPMFSSSFLLVF+LYFLD  FE CW +GNL+Y PQRDEEEEIG
Sbjct: 181 LRAFYFSFPLFLWIFGPIPMFSSSFLLVFMLYFLDATFELCWTEGNLEYHPQRDEEEEIG 240

Query: 241 K 242
           K
Sbjct: 241 K 241

[Close]
BLAST of CmoCh16G000030 vs. TrEMBL
Match: A0A058ZXX6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00459 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 5.5e-86
Identity = 172/242 (71.07%), Postives = 196/242 (80.99%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           M+KK+ DY LV SGL +M+AYH WL +RIV+HP+KTV+G+ AINRR WVRAMMED SKNG
Sbjct: 1   MDKKVLDYTLVPSGLFIMMAYHAWLLHRIVKHPDKTVVGVTAINRRFWVRAMMEDVSKNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           VLAVQTLRNNIMASTLLASTAI L SL+AVL+TSG  ++S L ++GD+S F FS+KFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAITLSSLIAVLMTSGYGNQSSLFIIGDRSKFSFSVKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNISTHAHHRRLTADYVATTVNRGSYFWSLG 180
           LVCFLVAFL NVQSIRYYSHASILIN P++ IS H    +  ADYVA TVNRGSYFWSLG
Sbjct: 121 LVCFLVAFLLNVQSIRYYSHASILINVPYRKISQHQRQHQAMADYVAKTVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSFLLVFLLYFLDVAFEFCWADGNLDYVPQRDE--EEE 240
           LR FYFSFPL LWIFGPIPMF S F LVF+LYFLDV+FE  WA    D     DE  +EE
Sbjct: 181 LRGFYFSFPLFLWIFGPIPMFLSCFALVFMLYFLDVSFESGWAVEASDDDDDDDERKDEE 240

[Close]
BLAST of CmoCh16G000030 vs. TrEMBL
Match: A0A058ZWH6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00049 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 2.1e-85
Identity = 171/243 (70.37%), Postives = 196/243 (80.66%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           M+KK+ DY LV SGL +M+AYH WL +RIV+HP+KTV+G+ AINRR WVRAMMED SKNG
Sbjct: 1   MDKKVLDYTLVPSGLFIMMAYHAWLLHRIVKHPDKTVVGVTAINRRFWVRAMMEDVSKNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           VLAVQTLRNNIMASTLLASTAI L SL+AVL+TSG  ++S L ++GD+S F FS+KFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAITLSSLIAVLMTSGYGNQSSLFIIGDRSKFSFSVKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNISTHAHHRRLTADYVATTVNRGSYFWSLG 180
           LVCFLVAFL NVQSIRYYSHASILIN P++ IS H    +  A+YVA TVNRGSYFWSLG
Sbjct: 121 LVCFLVAFLLNVQSIRYYSHASILINVPYRKISQHQQQHQAMAEYVAKTVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSFLLVFLLYFLDVAFEFCWADGNLDYVPQRDEE---E 240
           LR FYFSFPL LWIFGPIPMF S F LVF+LYFLDV+FE  WA    D     D+E   E
Sbjct: 181 LRGFYFSFPLFLWIFGPIPMFLSCFALVFMLYFLDVSFESGWAVEASDDDDDDDDERKDE 240

[Close]
BLAST of CmoCh16G000030 vs. TrEMBL
Match: M5XIA0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010476mg PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.6e-85
Identity = 172/243 (70.78%), Postives = 192/243 (79.01%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           M++++ DYILV +GL VMVAYH+WL YRI+  PN T+IGIN+INRR WV AMMEDA KNG
Sbjct: 1   MQERVLDYILVPAGLLVMVAYHLWLLYRIIMQPNNTIIGINSINRRFWVYAMMEDAPKNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           VLAVQTLRNNIMASTLLASTAIML SL+AVL+T G        V G++S   FSIKFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLSSLIAVLMTGGSKDRKAFFVFGNRSELAFSIKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNISTHAHHRRLTADYVATTVNRGSYFWSLG 180
           LVCFLVAFLFNVQSIRYYSHASILIN PFK +S H  H  LTA+YVA TVNRGSYFWSLG
Sbjct: 121 LVCFLVAFLFNVQSIRYYSHASILINAPFKKMSPHHKHHYLTAEYVANTVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSFLLVFLLYFLDVAFEFCWADGNLDYVP----QRDEE 240
           LRAFYFSFPL LWIFGPIPMF S F+LV +LYFLDV F+F W  G  D        +DEE
Sbjct: 181 LRAFYFSFPLFLWIFGPIPMFVSCFVLVIMLYFLDVTFQFGWVVGVADEEEHNSLNKDEE 240

[Close]
BLAST of CmoCh16G000030 vs. TrEMBL
Match: A0A058ZYL7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00062 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 6.8e-84
Identity = 169/240 (70.42%), Postives = 192/240 (80.00%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           M+KK+ DY LV SGL +M+AYH WL +RIV+HP KTV+G+ AINRR WVRAMMED SKNG
Sbjct: 1   MDKKVLDYTLVPSGLFIMMAYHAWLLHRIVKHPEKTVVGVTAINRRFWVRAMMEDVSKNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           VLAVQTLRNNIMASTLLASTAI L SL AVL+TSG  ++S L ++GD+S FGFS+KFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAITLSSLTAVLMTSGYGNQSSLFIIGDRSKFGFSVKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNISTHAHHRRLTADYVATTVNRGSYFWSLG 180
           LVCFLV FL NVQSIRYYSHASILIN P+  IS H    +  A+YVA TVNRGSYFWSLG
Sbjct: 121 LVCFLVPFLLNVQSIRYYSHASILINVPYTKISQHQQQHQEMAEYVAKTVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSFLLVFLLYFLDVAFEFCWA----DGNLDYVPQRDEE 237
           LR FYFSFPL LWIFGPIPMF S F LVF+LYFLDV+F   WA    D + D   ++DEE
Sbjct: 181 LRGFYFSFPLFLWIFGPIPMFLSCFALVFMLYFLDVSFGSGWAVEASDDDDDDEERKDEE 240

[Close]
BLAST of CmoCh16G000030 vs. TAIR10
Match: AT5G24600.1 (AT5G24600.1 Protein of unknown function, DUF599)

HSP 1 Score: 282.7 bits (722), Expect = 2.1e-76
Identity = 154/225 (68.44%), Postives = 175/225 (77.78%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           M+++  DY LV  GL +MV YH+WL YRI+  P+ TV+G+NA NRRLWV+AMMED+SKNG
Sbjct: 1   MKREYLDYTLVPLGLALMVFYHLWLLYRIIHRPSSTVVGLNAFNRRLWVQAMMEDSSKNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           VLAVQTLRNNIMASTLLASTAIMLCSL+AVL+TS     S   V GDKS   FS+KFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSATGERSVWFVFGDKSDRAFSLKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNISTHAHHRR------LTADYVATTVNRGS 180
           LVCFLVAFL NVQSIRYYSHASILIN PFK +   +   R      +  DYVA TVNRGS
Sbjct: 121 LVCFLVAFLLNVQSIRYYSHASILINVPFKQLMAVSSGGRGNGSLMINQDYVAATVNRGS 180

Query: 181 YFWSLGLRAFYFSFPLLLWIFGPIPMFSSSFLLVFLLYFLDVAFE 220
           YFWSLGLRAFYFS PL LWIFGPIPMF +  +LV  LYFLD+ F+
Sbjct: 181 YFWSLGLRAFYFSSPLFLWIFGPIPMFITCCVLVCSLYFLDLTFD 225

[Close]
BLAST of CmoCh16G000030 vs. TAIR10
Match: AT3G18215.1 (AT3G18215.1 Protein of unknown function, DUF599)

HSP 1 Score: 213.4 bits (542), Expect = 1.6e-55
Identity = 120/216 (55.56%), Postives = 149/216 (68.98%), Query Frame = 1 

Query: 7   DYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNGVLAVQT 66
           D +LV +GL VMVAYHVWL Y I+  P  TVI +NA +RR WV +MM +  KNG LAVQT
Sbjct: 8   DLVLVPTGLVVMVAYHVWLVYAILHRPKLTVIALNAESRRQWVFSMMTEPLKNGTLAVQT 67

Query: 67  LRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPL--VVLGDKSVFGFSIKFFAILVCF 126
           +RNNIMASTLLA+TAI LCS++ V V++   S+S    ++ G KS    S K FAIL+CF
Sbjct: 68  IRNNIMASTLLATTAITLCSIIGVFVSNSSSSKSTATNLIYGSKSPRLASFKNFAILICF 127

Query: 127 LVAFLFNVQSIRYYSHASILINTPFKNISTHAHHRRLTADYVATTVNRGSYFWSLGLRAF 186
           L+AFL N+QSIRYY+H S L+  P       +  +R   +YV+  +NR SYFWSLGLRAF
Sbjct: 128 LMAFLCNIQSIRYYAHVSFLVTVPV------SRGKREHCEYVSRNLNRASYFWSLGLRAF 187

Query: 187 YFSFPLLLWIFGPIPMFSSSFLLVFLLYFLDVAFEF 221
           YFSFPL LW FGPIPMF    ++  +LYFLD    F
Sbjct: 188 YFSFPLFLWTFGPIPMFVCCCMMSSILYFLDTTTSF 217

[Close]
BLAST of CmoCh16G000030 vs. TAIR10
Match: AT4G31330.1 (AT4G31330.1 Protein of unknown function, DUF599)

HSP 1 Score: 144.4 bits (363), Expect = 8.9e-35
Identity = 90/214 (42.06%), Postives = 131/214 (61.21%), Query Frame = 1 

Query: 7   DYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNGVLAVQT 66
           D ILV  GL V  +YHV+L++++   P  T+IG NA  RR WV ++++D  K  +LAVQT
Sbjct: 9   DVILVPLGLMVYASYHVYLWHKLRTQPLTTIIGTNARARRFWVASIIKDNDKKNILAVQT 68

Query: 67  LRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPL--VVLGDKSVFGFSIKFFAILVCF 126
           LRN IM STL+A+T+I+LC+ +A +++S    + PL   V G +  F  ++K+  IL  F
Sbjct: 69  LRNCIMGSTLMATTSILLCAGLAAVLSSTYAVKKPLNDAVFGARGEFMVALKYVTILTIF 128

Query: 127 LVAFLFNVQSIRYYSHASILINTPFKNISTHAHHRRLTADYVATTVNRGSYFWSLGLRAF 186
           L +F  +  SIR+ +  +ILINTPF              +YVA  + RG    ++G R F
Sbjct: 129 LFSFFSHSLSIRFINQVNILINTPFPPEELEDEMMMTAEEYVAELLERGFILNTVGNRLF 188

Query: 187 YFSFPLLLWIFGPIPMFSSSFLLVFLLYFLDVAF 219
           Y + PL+LWIFGP+ +F  S ++V LLY LD  F
Sbjct: 189 YAALPLMLWIFGPVLVFLCSVVMVPLLYNLDFFF 222

[Close]
BLAST of CmoCh16G000030 vs. TAIR10
Match: AT5G10580.1 (AT5G10580.1 Protein of unknown function, DUF599)

HSP 1 Score: 138.3 bits (347), Expect = 6.4e-33
Identity = 88/221 (39.82%), Postives = 131/221 (59.28%), Query Frame = 1 

Query: 2   EKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNGV 61
           EK   D +LV S L +M  YH++L+Y++   P  T++G N+  RR WV A+M+D  K  +
Sbjct: 4   EKWYLDAVLVPSALLMMFGYHIYLWYKVRTDPFCTIVGTNSRARRSWVAAIMKDNEKKNI 63

Query: 62  LAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPL--VVLGDKSVFGFSIKFFA 121
           LAVQTLRN IM  TL+A+T I+LC+ +A +++S    + PL   V G    F  ++K+  
Sbjct: 64  LAVQTLRNTIMGGTLMATTCILLCAGLAAVLSSTYSIKKPLNDAVYGAHGDFTVALKYVT 123

Query: 122 ILVCFLVAFLFNVQSIRYYSHASILINTPFKNISTHAHH--RRLTADYVATTVNRGSYFW 181
           IL  FL AF  +  SIR+ +  +ILIN P +  S         +T +YV+  + +     
Sbjct: 124 ILTIFLFAFFSHSLSIRFINQVNILINAPQEPFSDDFGEIGSFVTPEYVSELLEKAFLLN 183

Query: 182 SLGLRAFYFSFPLLLWIFGPIPMFSSSFLLVFLLYFLDVAF 219
           ++G R FY   PL+LWIFGP+ +F SS L++ +LY LD  F
Sbjct: 184 TVGNRLFYMGLPLMLWIFGPVLVFLSSALIIPVLYNLDFVF 224

[Close]
BLAST of CmoCh16G000030 vs. TAIR10
Match: AT5G46060.1 (AT5G46060.1 Protein of unknown function, DUF599)

HSP 1 Score: 136.0 bits (341), Expect = 3.2e-32
Identity = 87/218 (39.91%), Postives = 128/218 (58.72%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           ++K+  D +LV  GL ++++YH++L YRI+  P  T+IG   I++ +WV  +M+      
Sbjct: 5   VKKEYLDLVLVPFGLIIVLSYHLFLLYRILYFPYHTIIGFMNIDKSIWVDRIMQARKDEL 64

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLV---VLGDKSVFGFSIKF 120
             A+  L ++I AST +AS A+ L SL+   + S   S +      + GD S     IK+
Sbjct: 65  GGALTVLSSSISASTFMASIALTLSSLIGAWIGSSPVSMTVFTGHFIYGDTSSITMVIKY 124

Query: 121 FAILVCFLVAFLFNVQSIRYYSHASILINTPFKNISTHAHHRRLTADYVATTVNRGSYFW 180
            ++L+CFLVAF   +QS R + HA+ LI TP ++I           D V   V RG  +W
Sbjct: 125 TSLLICFLVAFCCFIQSTRCFLHANYLITTPGEDIPP---------DMVKRFVLRGGNYW 184

Query: 181 SLGLRAFYFSFPLLLWIFGPIPMFSSSFLLVFLLYFLD 216
           SLGLRA Y +  LLLW+FGP+PMF +S L+V  LYFLD
Sbjct: 185 SLGLRALYLALDLLLWLFGPVPMFINSVLMVICLYFLD 213

[Close]
BLAST of CmoCh16G000030 vs. NCBI nr
Match: gi|449437922|ref|XP_004136739.1| (PREDICTED: uncharacterized protein LOC101204683 [Cucumis sativus])

HSP 1 Score: 393.3 bits (1009), Expect = 3.1e-106
Identity = 199/241 (82.57%), Postives = 217/241 (90.04%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           MEK+I DY L++SG+ VMV YH+WL  RI+++PNKTVIGINAINRR WVRAMMEDASKNG
Sbjct: 1   MEKEIVDYTLIASGVSVMVGYHIWLLIRILKYPNKTVIGINAINRRYWVRAMMEDASKNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           VLAVQTLRNNIMASTLLASTAIMLCSL+AVL+TSGG SESPLVVL ++S F FSIKFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGRSESPLVVLNERSQFSFSIKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNISTHAHHRRLTADYVATTVNRGSYFWSLG 180
           L+CFLVAFLFNVQSIRYYSHASILINTPFK I    HH+RLT +YVA TVNRGSYFWSLG
Sbjct: 121 LLCFLVAFLFNVQSIRYYSHASILINTPFKKIRVDGHHQRLTTEYVAATVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSFLLVFLLYFLDVAFEFCWADGNLDYVPQRDEEEEIG 240
           LRAFYFSFPL LWIFGPIPMFSSSFLLVF+LYFLD  FE CW +GNL+Y PQRDEEEEIG
Sbjct: 181 LRAFYFSFPLFLWIFGPIPMFSSSFLLVFMLYFLDATFELCWTEGNLEYHPQRDEEEEIG 240

Query: 241 K 242
           K
Sbjct: 241 K 241

[Close]
BLAST of CmoCh16G000030 vs. NCBI nr
Match: gi|659084794|ref|XP_008443077.1| (PREDICTED: uncharacterized protein LOC103486782 [Cucumis melo])

HSP 1 Score: 391.3 bits (1004), Expect = 1.2e-105
Identity = 198/241 (82.16%), Postives = 216/241 (89.63%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           MEK+I DY L++ G+ VMV YH+WLF RI+++P KTVIGINAINRR WVRAMMED SKNG
Sbjct: 1   MEKEIVDYTLIALGVSVMVGYHIWLFIRILKYPKKTVIGINAINRRYWVRAMMEDVSKNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           VLAVQTLRNNIMASTLLASTAIMLCSL+AVL+TSGG SESPLVVL ++S F FSIKFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGRSESPLVVLNERSQFSFSIKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNISTHAHHRRLTADYVATTVNRGSYFWSLG 180
           L+CFLVAFLFNVQSIRYYSHASILINTPFK I+   HH+RLT +YVA TVNRGSYFWSLG
Sbjct: 121 LLCFLVAFLFNVQSIRYYSHASILINTPFKKIAIDGHHQRLTTEYVAATVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSFLLVFLLYFLDVAFEFCWADGNLDYVPQRDEEEEIG 240
           LRAFYFSFPL LWIFGPIPMFSSSFLLVF+LYFLD  FE CW +GNLDY PQRDEEEEIG
Sbjct: 181 LRAFYFSFPLFLWIFGPIPMFSSSFLLVFMLYFLDATFELCWTEGNLDYHPQRDEEEEIG 240

Query: 241 K 242
           K
Sbjct: 241 K 241

[Close]
BLAST of CmoCh16G000030 vs. NCBI nr
Match: gi|657970219|ref|XP_008376849.1| (PREDICTED: uncharacterized protein LOC103439971 [Malus domestica])

HSP 1 Score: 326.2 bits (835), Expect = 4.7e-86
Identity = 172/241 (71.37%), Postives = 197/241 (81.74%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           M++++ DY+LV +GL VMVAYH+WL YRI+  PN TVIGIN+INRR WV AMME+A K+G
Sbjct: 1   MQQRVLDYVLVPAGLLVMVAYHLWLLYRILXQPNSTVIGINSINRRFWVHAMMEEAPKHG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           VLAVQTLRNNIMASTLLASTAI LCSL+A+L+TSG    + L V GD+S   FSIKFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAITLCSLIALLMTSGTKYRAALFVFGDRSELAFSIKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNISTHAHHRRLTADYVATTVNRGSYFWSLG 180
           LVCFLVAFLFNVQSIRYYSHASILIN P K +S H  H  LT DYVATTVNRGSYFWSLG
Sbjct: 121 LVCFLVAFLFNVQSIRYYSHASILINAPCKKMSPHHQHHYLTTDYVATTVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSFLLVFLLYFLDVAFEFCWADG---NLDYVPQRDEEE 239
           LRAFYFSFPL LWIFGPIPMF S F+LV +LYFLDV F+F W  G   N D++  +D+EE
Sbjct: 181 LRAFYFSFPLFLWIFGPIPMFVSCFVLVIMLYFLDVTFQFGWEVGVADNDDHILIKDDEE 240

[Close]
BLAST of CmoCh16G000030 vs. NCBI nr
Match: gi|702489196|ref|XP_010035332.1| (PREDICTED: uncharacterized protein LOC104424573 [Eucalyptus grandis])

HSP 1 Score: 325.5 bits (833), Expect = 8.0e-86
Identity = 172/242 (71.07%), Postives = 196/242 (80.99%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           M+KK+ DY LV SGL +M+AYH WL +RIV+HP+KTV+G+ AINRR WVRAMMED SKNG
Sbjct: 1   MDKKVLDYTLVPSGLFIMMAYHAWLLHRIVKHPDKTVVGVTAINRRFWVRAMMEDVSKNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           VLAVQTLRNNIMASTLLASTAI L SL+AVL+TSG  ++S L ++GD+S F FS+KFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAITLSSLIAVLMTSGYGNQSSLFIIGDRSKFSFSVKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNISTHAHHRRLTADYVATTVNRGSYFWSLG 180
           LVCFLVAFL NVQSIRYYSHASILIN P++ IS H    +  ADYVA TVNRGSYFWSLG
Sbjct: 121 LVCFLVAFLLNVQSIRYYSHASILINVPYRKISQHQRQHQAMADYVAKTVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSFLLVFLLYFLDVAFEFCWADGNLDYVPQRDE--EEE 240
           LR FYFSFPL LWIFGPIPMF S F LVF+LYFLDV+FE  WA    D     DE  +EE
Sbjct: 181 LRGFYFSFPLFLWIFGPIPMFLSCFALVFMLYFLDVSFESGWAVEASDDDDDDDERKDEE 240

[Close]
BLAST of CmoCh16G000030 vs. NCBI nr
Match: gi|694364265|ref|XP_009361244.1| (PREDICTED: uncharacterized protein LOC103951550 [Pyrus x bretschneideri])

HSP 1 Score: 324.7 bits (831), Expect = 1.4e-85
Identity = 171/241 (70.95%), Postives = 196/241 (81.33%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           M++++ DY+LV +GL VMV YH+WL YRI+  PN TVIGIN+INRR WV AMME+A K+G
Sbjct: 1   MQQRVLDYVLVPAGLLVMVTYHLWLLYRILTQPNSTVIGINSINRRFWVHAMMEEAPKHG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           VLAVQTLRNNIMASTLLASTAI LCSL+A+L+TSG    + L V GD+S   FSIKFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAITLCSLIALLMTSGTKYRAALFVFGDRSELAFSIKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNISTHAHHRRLTADYVATTVNRGSYFWSLG 180
           LVCFLVAFLFNVQSIRYYSHASILIN P K +S H  H  LT DYVATTVNRGSYFWSLG
Sbjct: 121 LVCFLVAFLFNVQSIRYYSHASILINVPCKKMSPHHQHHYLTTDYVATTVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSFLLVFLLYFLDVAFEFCWADG---NLDYVPQRDEEE 239
           LRAFYFSFPL LWIFGPIPMF S F+LV +LYFLDV F+F W  G   N D++  +D+EE
Sbjct: 181 LRAFYFSFPLFLWIFGPIPMFVSCFVLVIMLYFLDVTFQFGWEVGVADNDDHILIKDDEE 240

The following BLAST results are available for this feature:
BLAST of CmoCh16G000030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh16G000030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEH7_CUCSA2.2e-10682.57Uncharacterized protein OS=Cucumis sativus GN=Csa_3G809950 PE=4 SV=1[more]
A0A058ZXX6_EUCGR5.5e-8671.07Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00459 PE=4 SV=1[more]
A0A058ZWH6_EUCGR2.1e-8570.37Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00049 PE=4 SV=1[more]
M5XIA0_PRUPE3.6e-8570.78Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010476mg PE=4 SV=1[more]
A0A058ZYL7_EUCGR6.8e-8470.42Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00062 PE=4 SV=1[more]
BLAST of CmoCh16G000030 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G24600.12.1e-7668.44 Protein of unknown function, DUF599[more]
AT3G18215.11.6e-5555.56 Protein of unknown function, DUF599[more]
AT4G31330.18.9e-3542.06 Protein of unknown function, DUF599[more]
AT5G10580.16.4e-3339.82 Protein of unknown function, DUF599[more]
AT5G46060.13.2e-3239.91 Protein of unknown function, DUF599[more]
BLAST of CmoCh16G000030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449437922|ref|XP_004136739.1|3.1e-10682.57PREDICTED: uncharacterized protein LOC101204683 [Cucumis sativus][more]
gi|659084794|ref|XP_008443077.1|1.2e-10582.16PREDICTED: uncharacterized protein LOC103486782 [Cucumis melo][more]
gi|657970219|ref|XP_008376849.1|4.7e-8671.37PREDICTED: uncharacterized protein LOC103439971 [Malus domestica][more]
gi|702489196|ref|XP_010035332.1|8.0e-8671.07PREDICTED: uncharacterized protein LOC104424573 [Eucalyptus grandis][more]
gi|694364265|ref|XP_009361244.1|1.4e-8570.95PREDICTED: uncharacterized protein LOC103951550 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006747DUF599
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G000030.1CmoCh16G000030.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006747Protein of unknown function DUF599PFAMPF04654DUF599coord: 9..217
score: 6.6
NoneNo IPR availablePANTHERPTHR31168FAMILY NOT NAMEDcoord: 1..238
score: 4.9E
NoneNo IPR availablePANTHERPTHR31168:SF3SUBFAMILY NOT NAMEDcoord: 1..238
score: 4.9E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh16G000030CmaCh16G000040Cucurbita maxima (Rimu)cmacmoB322
CmoCh16G000030Cp4.1LG14g07090Cucurbita pepo (Zucchini)cmocpeB307
CmoCh16G000030Carg15021Silver-seed gourdcarcmoB1326
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh16G000030Melon (DHL92) v3.6.1cmomedB346
CmoCh16G000030Silver-seed gourdcarcmoB0730
CmoCh16G000030Watermelon (97103) v2cmowmbB340
CmoCh16G000030Wax gourdcmowgoB0439
CmoCh16G000030Cucurbita moschata (Rifu)cmocmoB275
CmoCh16G000030Melon (DHL92) v3.5.1cmomeB302
CmoCh16G000030Watermelon (Charleston Gray)cmowcgB298
CmoCh16G000030Watermelon (97103) v1cmowmB309
CmoCh16G000030Cucurbita pepo (Zucchini)cmocpeB303
CmoCh16G000030Bottle gourd (USVL1VR-Ls)cmolsiB319