CmaCh16G000040 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G000040
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionTRP-like ion channel pkd2
LocationCma_Chr16 : 22785 .. 23625 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCAGTTGTATCATTGGATTGGGAGAAGGAAATGGAGAAAAAGATTAGCGACTACATATTGGTGTCATCTGGGCTCGGTGTCATGGTCGCCTATCACGTATGGCTTTTCTATCGGATCGTCAGACATCCCAACAAGACTGTAATTGGCATCAACGCCATCAATCGTCGTTTGTGGGTTCGTGCTATGATGGAGGTCCGATTCAGGCCACCATTCTTTTTATTTTTATTTTTTCTATTCACCTTCATACTCTAAAACTAAAATTCGAAGTGGTATCAGGATGCGTCAAAGAATGGCATCCTTGCCGTCCAAACGCTGAGGAATAATATAATGGCGTCCACCCTTTTGGCATCGACGGCTATAATGCTCTGCTCTCTCATGGCCGTCTTAGTGACGAGTGGCGGCCACAGTGAATCCCCATTAGTGGTACTCGGTGACAAAAGCGTGTTCGGTTTCTCTATCAAGTTCTTCGCCATTTTGGTGTGCTTTTTGGTGGCGTTTTTGTTTAACGTTCAGTCCATCAGGTATTACAGTCATGCAAGCATTCTTATCAATACGCCCTTCAAAAACGTTTCAACCCACGCTCACCATCGACGCCTCACGGCTGAATACGTCGCCACCACAGTGAATAGAGGCAGCTATTTCTGGTCCTTAGGATTGCGTGCCTTCTACTTCTCATTTCCTCTGCTTTTGTGGATCTTTGGACCTATTCCTATGTTCTCATCTTCCTGTCTCCTTGTTTTTATGCTTTATTTTCTTGATGTCGCCTTTGAATTCTGTTGGGCTGATGGGAATTTGGATTACGTCCCTCAAAGGGACGAGGAGGAGGAAATTGGGAAATAG

mRNA sequence

AGCAGTTGTATCATTGGATTGGGAGAAGGAAATGGAGAAAAAGATTAGCGACTACATATTGGTGTCATCTGGGCTCGGTGTCATGGTCGCCTATCACGTATGGCTTTTCTATCGGATCGTCAGACATCCCAACAAGACTGTAATTGGCATCAACGCCATCAATCGTCGTTTGTGGGTTCGTGCTATGATGGAGGATGCGTCAAAGAATGGCATCCTTGCCGTCCAAACGCTGAGGAATAATATAATGGCGTCCACCCTTTTGGCATCGACGGCTATAATGCTCTGCTCTCTCATGGCCGTCTTAGTGACGAGTGGCGGCCACAGTGAATCCCCATTAGTGGTACTCGGTGACAAAAGCGTGTTCGGTTTCTCTATCAAGTTCTTCGCCATTTTGGTGTGCTTTTTGGTGGCGTTTTTGTTTAACGTTCAGTCCATCAGGTATTACAGTCATGCAAGCATTCTTATCAATACGCCCTTCAAAAACGTTTCAACCCACGCTCACCATCGACGCCTCACGGCTGAATACGTCGCCACCACAGTGAATAGAGGCAGCTATTTCTGGTCCTTAGGATTGCGTGCCTTCTACTTCTCATTTCCTCTGCTTTTGTGGATCTTTGGACCTATTCCTATGTTCTCATCTTCCTGTCTCCTTGTTTTTATGCTTTATTTTCTTGATGTCGCCTTTGAATTCTGTTGGGCTGATGGGAATTTGGATTACGTCCCTCAAAGGGACGAGGAGGAGGAAATTGGGAAATAG

Coding sequence (CDS)

ATGGAGAAAAAGATTAGCGACTACATATTGGTGTCATCTGGGCTCGGTGTCATGGTCGCCTATCACGTATGGCTTTTCTATCGGATCGTCAGACATCCCAACAAGACTGTAATTGGCATCAACGCCATCAATCGTCGTTTGTGGGTTCGTGCTATGATGGAGGATGCGTCAAAGAATGGCATCCTTGCCGTCCAAACGCTGAGGAATAATATAATGGCGTCCACCCTTTTGGCATCGACGGCTATAATGCTCTGCTCTCTCATGGCCGTCTTAGTGACGAGTGGCGGCCACAGTGAATCCCCATTAGTGGTACTCGGTGACAAAAGCGTGTTCGGTTTCTCTATCAAGTTCTTCGCCATTTTGGTGTGCTTTTTGGTGGCGTTTTTGTTTAACGTTCAGTCCATCAGGTATTACAGTCATGCAAGCATTCTTATCAATACGCCCTTCAAAAACGTTTCAACCCACGCTCACCATCGACGCCTCACGGCTGAATACGTCGCCACCACAGTGAATAGAGGCAGCTATTTCTGGTCCTTAGGATTGCGTGCCTTCTACTTCTCATTTCCTCTGCTTTTGTGGATCTTTGGACCTATTCCTATGTTCTCATCTTCCTGTCTCCTTGTTTTTATGCTTTATTTTCTTGATGTCGCCTTTGAATTCTGTTGGGCTGATGGGAATTTGGATTACGTCCCTCAAAGGGACGAGGAGGAGGAAATTGGGAAATAG

Protein sequence

MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNGILAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAILVCFLVAFLFNVQSIRYYSHASILINTPFKNVSTHAHHRRLTAEYVATTVNRGSYFWSLGLRAFYFSFPLLLWIFGPIPMFSSSCLLVFMLYFLDVAFEFCWADGNLDYVPQRDEEEEIGK
Homology
[Close]
BLAST of CmaCh16G000040 vs. TrEMBL
Match: A0A0A0LEH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G809950 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 2.2e-106
Identity = 198/241 (82.16%), Postives = 216/241 (89.63%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           MEK+I DY L++SG+ VMV YH+WL  RI+++PNKTVIGINAINRR WVRAMMEDASKNG
Sbjct: 1   MEKEIVDYTLIASGVSVMVGYHIWLLIRILKYPNKTVIGINAINRRYWVRAMMEDASKNG 60

Query: 61  ILAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           +LAVQTLRNNIMASTLLASTAIMLCSL+AVL+TSGG SESPLVVL ++S F FSIKFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGRSESPLVVLNERSQFSFSIKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNVSTHAHHRRLTAEYVATTVNRGSYFWSLG 180
           L+CFLVAFLFNVQSIRYYSHASILINTPFK +    HH+RLT EYVA TVNRGSYFWSLG
Sbjct: 121 LLCFLVAFLFNVQSIRYYSHASILINTPFKKIRVDGHHQRLTTEYVAATVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSCLLVFMLYFLDVAFEFCWADGNLDYVPQRDEEEEIG 240
           LRAFYFSFPL LWIFGPIPMFSSS LLVFMLYFLD  FE CW +GNL+Y PQRDEEEEIG
Sbjct: 181 LRAFYFSFPLFLWIFGPIPMFSSSFLLVFMLYFLDATFELCWTEGNLEYHPQRDEEEEIG 240

Query: 241 K 242
           K
Sbjct: 241 K 241

[Close]
BLAST of CmaCh16G000040 vs. TrEMBL
Match: A0A058ZWH6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00049 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.8e-85
Identity = 170/243 (69.96%), Postives = 195/243 (80.25%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           M+KK+ DY LV SGL +M+AYH WL +RIV+HP+KTV+G+ AINRR WVRAMMED SKNG
Sbjct: 1   MDKKVLDYTLVPSGLFIMMAYHAWLLHRIVKHPDKTVVGVTAINRRFWVRAMMEDVSKNG 60

Query: 61  ILAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           +LAVQTLRNNIMASTLLASTAI L SL+AVL+TSG  ++S L ++GD+S F FS+KFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAITLSSLIAVLMTSGYGNQSSLFIIGDRSKFSFSVKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNVSTHAHHRRLTAEYVATTVNRGSYFWSLG 180
           LVCFLVAFL NVQSIRYYSHASILIN P++ +S H    +  AEYVA TVNRGSYFWSLG
Sbjct: 121 LVCFLVAFLLNVQSIRYYSHASILINVPYRKISQHQQQHQAMAEYVAKTVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSCLLVFMLYFLDVAFEFCWADGNLDYVPQRDEE---E 240
           LR FYFSFPL LWIFGPIPMF S   LVFMLYFLDV+FE  WA    D     D+E   E
Sbjct: 181 LRGFYFSFPLFLWIFGPIPMFLSCFALVFMLYFLDVSFESGWAVEASDDDDDDDDERKDE 240

[Close]
BLAST of CmaCh16G000040 vs. TrEMBL
Match: M5XIA0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010476mg PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.6e-85
Identity = 172/243 (70.78%), Postives = 191/243 (78.60%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           M++++ DYILV +GL VMVAYH+WL YRI+  PN T+IGIN+INRR WV AMMEDA KNG
Sbjct: 1   MQERVLDYILVPAGLLVMVAYHLWLLYRIIMQPNNTIIGINSINRRFWVYAMMEDAPKNG 60

Query: 61  ILAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           +LAVQTLRNNIMASTLLASTAIML SL+AVL+T G        V G++S   FSIKFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLSSLIAVLMTGGSKDRKAFFVFGNRSELAFSIKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNVSTHAHHRRLTAEYVATTVNRGSYFWSLG 180
           LVCFLVAFLFNVQSIRYYSHASILIN PFK +S H  H  LTAEYVA TVNRGSYFWSLG
Sbjct: 121 LVCFLVAFLFNVQSIRYYSHASILINAPFKKMSPHHKHHYLTAEYVANTVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSCLLVFMLYFLDVAFEFCWADGNLDYVP----QRDEE 240
           LRAFYFSFPL LWIFGPIPMF S  +LV MLYFLDV F+F W  G  D        +DEE
Sbjct: 181 LRAFYFSFPLFLWIFGPIPMFVSCFVLVIMLYFLDVTFQFGWVVGVADEEEHNSLNKDEE 240

[Close]
BLAST of CmaCh16G000040 vs. TrEMBL
Match: A0A058ZXX6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00459 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 4.7e-85
Identity = 169/242 (69.83%), Postives = 195/242 (80.58%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           M+KK+ DY LV SGL +M+AYH WL +RIV+HP+KTV+G+ AINRR WVRAMMED SKNG
Sbjct: 1   MDKKVLDYTLVPSGLFIMMAYHAWLLHRIVKHPDKTVVGVTAINRRFWVRAMMEDVSKNG 60

Query: 61  ILAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           +LAVQTLRNNIMASTLLASTAI L SL+AVL+TSG  ++S L ++GD+S F FS+KFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAITLSSLIAVLMTSGYGNQSSLFIIGDRSKFSFSVKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNVSTHAHHRRLTAEYVATTVNRGSYFWSLG 180
           LVCFLVAFL NVQSIRYYSHASILIN P++ +S H    +  A+YVA TVNRGSYFWSLG
Sbjct: 121 LVCFLVAFLLNVQSIRYYSHASILINVPYRKISQHQRQHQAMADYVAKTVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSCLLVFMLYFLDVAFEFCWADGNLDYVPQRDE--EEE 240
           LR FYFSFPL LWIFGPIPMF S   LVFMLYFLDV+FE  WA    D     DE  +EE
Sbjct: 181 LRGFYFSFPLFLWIFGPIPMFLSCFALVFMLYFLDVSFESGWAVEASDDDDDDDERKDEE 240

[Close]
BLAST of CmaCh16G000040 vs. TrEMBL
Match: A0A0D2TD29_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G263100 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 4.0e-84
Identity = 166/237 (70.04%), Postives = 190/237 (80.17%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           MEK+  D++LV  G+ +MVAYHVWL YRI++HP KTVIG+NAINRR WV+AMME+ASKNG
Sbjct: 3   MEKQYLDWVLVPMGILLMVAYHVWLLYRILKHPTKTVIGVNAINRRFWVQAMMEEASKNG 62

Query: 61  ILAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           +LAVQT RNNIMASTLLASTAIML SL+AVL+T+G    S   + GD+S   FSIKFF+I
Sbjct: 63  VLAVQTFRNNIMASTLLASTAIMLSSLIAVLMTNGKGDRSSWFIFGDESDLAFSIKFFSI 122

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNVSTHAHHRRLTAEYVATTVNRGSYFWSLG 180
           LVCFLVAFL N+QSIRYYSHASILIN P K +S H HH  LT EYVA TVNRGSYFWSLG
Sbjct: 123 LVCFLVAFLLNLQSIRYYSHASILINVPVKKMSHHHHHHHLTVEYVANTVNRGSYFWSLG 182

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSCLLVFMLYFLDVAFEFCWADGNLDYVPQRDEEE 238
           LRAFYFSFPL LWIFGP+PMF     LVFMLYFLDV F+F WA G ++      +EE
Sbjct: 183 LRAFYFSFPLFLWIFGPLPMFFCCIALVFMLYFLDVTFQFGWAVGVVNDNGHTGDEE 239

[Close]
BLAST of CmaCh16G000040 vs. TAIR10
Match: AT5G24600.1 (AT5G24600.1 Protein of unknown function, DUF599)

HSP 1 Score: 286.2 bits (731), Expect = 1.9e-77
Identity = 153/225 (68.00%), Postives = 176/225 (78.22%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           M+++  DY LV  GL +MV YH+WL YRI+  P+ TV+G+NA NRRLWV+AMMED+SKNG
Sbjct: 1   MKREYLDYTLVPLGLALMVFYHLWLLYRIIHRPSSTVVGLNAFNRRLWVQAMMEDSSKNG 60

Query: 61  ILAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           +LAVQTLRNNIMASTLLASTAIMLCSL+AVL+TS     S   V GDKS   FS+KFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSATGERSVWFVFGDKSDRAFSLKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNVSTHAHHRR------LTAEYVATTVNRGS 180
           LVCFLVAFL NVQSIRYYSHASILIN PFK +   +   R      +  +YVA TVNRGS
Sbjct: 121 LVCFLVAFLLNVQSIRYYSHASILINVPFKQLMAVSSGGRGNGSLMINQDYVAATVNRGS 180

Query: 181 YFWSLGLRAFYFSFPLLLWIFGPIPMFSSSCLLVFMLYFLDVAFE 220
           YFWSLGLRAFYFS PL LWIFGPIPMF + C+LV  LYFLD+ F+
Sbjct: 181 YFWSLGLRAFYFSSPLFLWIFGPIPMFITCCVLVCSLYFLDLTFD 225

[Close]
BLAST of CmaCh16G000040 vs. TAIR10
Match: AT3G18215.1 (AT3G18215.1 Protein of unknown function, DUF599)

HSP 1 Score: 219.5 bits (558), Expect = 2.2e-57
Identity = 122/216 (56.48%), Postives = 150/216 (69.44%), Query Frame = 1 

Query: 7   DYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNGILAVQT 66
           D +LV +GL VMVAYHVWL Y I+  P  TVI +NA +RR WV +MM +  KNG LAVQT
Sbjct: 8   DLVLVPTGLVVMVAYHVWLVYAILHRPKLTVIALNAESRRQWVFSMMTEPLKNGTLAVQT 67

Query: 67  LRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPL--VVLGDKSVFGFSIKFFAILVCF 126
           +RNNIMASTLLA+TAI LCS++ V V++   S+S    ++ G KS    S K FAIL+CF
Sbjct: 68  IRNNIMASTLLATTAITLCSIIGVFVSNSSSSKSTATNLIYGSKSPRLASFKNFAILICF 127

Query: 127 LVAFLFNVQSIRYYSHASILINTPFKNVSTHAHHRRLTAEYVATTVNRGSYFWSLGLRAF 186
           L+AFL N+QSIRYY+H S L+  P       +  +R   EYV+  +NR SYFWSLGLRAF
Sbjct: 128 LMAFLCNIQSIRYYAHVSFLVTVPV------SRGKREHCEYVSRNLNRASYFWSLGLRAF 187

Query: 187 YFSFPLLLWIFGPIPMFSSSCLLVFMLYFLDVAFEF 221
           YFSFPL LW FGPIPMF   C++  +LYFLD    F
Sbjct: 188 YFSFPLFLWTFGPIPMFVCCCMMSSILYFLDTTTSF 217

[Close]
BLAST of CmaCh16G000040 vs. TAIR10
Match: AT4G31330.1 (AT4G31330.1 Protein of unknown function, DUF599)

HSP 1 Score: 146.7 bits (369), Expect = 1.8e-35
Identity = 91/214 (42.52%), Postives = 131/214 (61.21%), Query Frame = 1 

Query: 7   DYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNGILAVQT 66
           D ILV  GL V  +YHV+L++++   P  T+IG NA  RR WV ++++D  K  ILAVQT
Sbjct: 9   DVILVPLGLMVYASYHVYLWHKLRTQPLTTIIGTNARARRFWVASIIKDNDKKNILAVQT 68

Query: 67  LRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPL--VVLGDKSVFGFSIKFFAILVCF 126
           LRN IM STL+A+T+I+LC+ +A +++S    + PL   V G +  F  ++K+  IL  F
Sbjct: 69  LRNCIMGSTLMATTSILLCAGLAAVLSSTYAVKKPLNDAVFGARGEFMVALKYVTILTIF 128

Query: 127 LVAFLFNVQSIRYYSHASILINTPFKNVSTHAHHRRLTAEYVATTVNRGSYFWSLGLRAF 186
           L +F  +  SIR+ +  +ILINTPF              EYVA  + RG    ++G R F
Sbjct: 129 LFSFFSHSLSIRFINQVNILINTPFPPEELEDEMMMTAEEYVAELLERGFILNTVGNRLF 188

Query: 187 YFSFPLLLWIFGPIPMFSSSCLLVFMLYFLDVAF 219
           Y + PL+LWIFGP+ +F  S ++V +LY LD  F
Sbjct: 189 YAALPLMLWIFGPVLVFLCSVVMVPLLYNLDFFF 222

[Close]
BLAST of CmaCh16G000040 vs. TAIR10
Match: AT5G10580.1 (AT5G10580.1 Protein of unknown function, DUF599)

HSP 1 Score: 141.4 bits (355), Expect = 7.5e-34
Identity = 90/221 (40.72%), Postives = 131/221 (59.28%), Query Frame = 1 

Query: 2   EKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNGI 61
           EK   D +LV S L +M  YH++L+Y++   P  T++G N+  RR WV A+M+D  K  I
Sbjct: 4   EKWYLDAVLVPSALLMMFGYHIYLWYKVRTDPFCTIVGTNSRARRSWVAAIMKDNEKKNI 63

Query: 62  LAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPL--VVLGDKSVFGFSIKFFA 121
           LAVQTLRN IM  TL+A+T I+LC+ +A +++S    + PL   V G    F  ++K+  
Sbjct: 64  LAVQTLRNTIMGGTLMATTCILLCAGLAAVLSSTYSIKKPLNDAVYGAHGDFTVALKYVT 123

Query: 122 ILVCFLVAFLFNVQSIRYYSHASILINTPFKNVSTHAHH--RRLTAEYVATTVNRGSYFW 181
           IL  FL AF  +  SIR+ +  +ILIN P +  S         +T EYV+  + +     
Sbjct: 124 ILTIFLFAFFSHSLSIRFINQVNILINAPQEPFSDDFGEIGSFVTPEYVSELLEKAFLLN 183

Query: 182 SLGLRAFYFSFPLLLWIFGPIPMFSSSCLLVFMLYFLDVAF 219
           ++G R FY   PL+LWIFGP+ +F SS L++ +LY LD  F
Sbjct: 184 TVGNRLFYMGLPLMLWIFGPVLVFLSSALIIPVLYNLDFVF 224

[Close]
BLAST of CmaCh16G000040 vs. TAIR10
Match: AT5G24790.1 (AT5G24790.1 Protein of unknown function, DUF599)

HSP 1 Score: 136.7 bits (343), Expect = 1.9e-32
Identity = 84/212 (39.62%), Postives = 133/212 (62.74%), Query Frame = 1 

Query: 7   DYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNGILAVQT 66
           D ILV   L +M+ YH++L + +  +P  T++GIN+  RR+W+ AM++D  K  ILAVQT
Sbjct: 9   DAILVPLALMMMICYHIYLSFMVRTNPFSTLLGINSHGRRIWISAMIKDNQKTNILAVQT 68

Query: 67  LRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPL--VVLGDKSVFGFSIKFFAILVCF 126
           LRN +M +TL+A+T ++LC+ +A +++S    + PL   V G    F  SIK+  IL  F
Sbjct: 69  LRNIVMGATLMATTCVLLCAGLAAVLSSTYSIKKPLNDAVFGAHGDFAISIKYLTILTIF 128

Query: 127 LVAFLFNVQSIRYYSHASILINTPFKNVSTH-AHHRRLTAEYVATTVNRGSYFWSLGLRA 186
           + +F F+  SIR+ +  +IL+N P  N+  + +    LT+E+V+    +G +  ++G R 
Sbjct: 129 IFSFFFHSLSIRFLNQVAILVNIP--NLDPNPSGCVFLTSEHVSEMFEKGIFLNTVGNRL 188

Query: 187 FYFSFPLLLWIFGPIPMFSSSCLLVFMLYFLD 216
           FY  F L+LWIFGPI +F S  ++V +L  LD
Sbjct: 189 FYAGFSLMLWIFGPILVFFSVLVMVLVLSHLD 218

[Close]
BLAST of CmaCh16G000040 vs. NCBI nr
Match: gi|449437922|ref|XP_004136739.1| (PREDICTED: uncharacterized protein LOC101204683 [Cucumis sativus])

HSP 1 Score: 393.3 bits (1009), Expect = 3.1e-106
Identity = 198/241 (82.16%), Postives = 216/241 (89.63%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           MEK+I DY L++SG+ VMV YH+WL  RI+++PNKTVIGINAINRR WVRAMMEDASKNG
Sbjct: 1   MEKEIVDYTLIASGVSVMVGYHIWLLIRILKYPNKTVIGINAINRRYWVRAMMEDASKNG 60

Query: 61  ILAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           +LAVQTLRNNIMASTLLASTAIMLCSL+AVL+TSGG SESPLVVL ++S F FSIKFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGRSESPLVVLNERSQFSFSIKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNVSTHAHHRRLTAEYVATTVNRGSYFWSLG 180
           L+CFLVAFLFNVQSIRYYSHASILINTPFK +    HH+RLT EYVA TVNRGSYFWSLG
Sbjct: 121 LLCFLVAFLFNVQSIRYYSHASILINTPFKKIRVDGHHQRLTTEYVAATVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSCLLVFMLYFLDVAFEFCWADGNLDYVPQRDEEEEIG 240
           LRAFYFSFPL LWIFGPIPMFSSS LLVFMLYFLD  FE CW +GNL+Y PQRDEEEEIG
Sbjct: 181 LRAFYFSFPLFLWIFGPIPMFSSSFLLVFMLYFLDATFELCWTEGNLEYHPQRDEEEEIG 240

Query: 241 K 242
           K
Sbjct: 241 K 241

[Close]
BLAST of CmaCh16G000040 vs. NCBI nr
Match: gi|659084794|ref|XP_008443077.1| (PREDICTED: uncharacterized protein LOC103486782 [Cucumis melo])

HSP 1 Score: 391.3 bits (1004), Expect = 1.2e-105
Identity = 197/241 (81.74%), Postives = 215/241 (89.21%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           MEK+I DY L++ G+ VMV YH+WLF RI+++P KTVIGINAINRR WVRAMMED SKNG
Sbjct: 1   MEKEIVDYTLIALGVSVMVGYHIWLFIRILKYPKKTVIGINAINRRYWVRAMMEDVSKNG 60

Query: 61  ILAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           +LAVQTLRNNIMASTLLASTAIMLCSL+AVL+TSGG SESPLVVL ++S F FSIKFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGRSESPLVVLNERSQFSFSIKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNVSTHAHHRRLTAEYVATTVNRGSYFWSLG 180
           L+CFLVAFLFNVQSIRYYSHASILINTPFK ++   HH+RLT EYVA TVNRGSYFWSLG
Sbjct: 121 LLCFLVAFLFNVQSIRYYSHASILINTPFKKIAIDGHHQRLTTEYVAATVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSCLLVFMLYFLDVAFEFCWADGNLDYVPQRDEEEEIG 240
           LRAFYFSFPL LWIFGPIPMFSSS LLVFMLYFLD  FE CW +GNLDY PQRDEEEEIG
Sbjct: 181 LRAFYFSFPLFLWIFGPIPMFSSSFLLVFMLYFLDATFELCWTEGNLDYHPQRDEEEEIG 240

Query: 241 K 242
           K
Sbjct: 241 K 241

[Close]
BLAST of CmaCh16G000040 vs. NCBI nr
Match: gi|657970219|ref|XP_008376849.1| (PREDICTED: uncharacterized protein LOC103439971 [Malus domestica])

HSP 1 Score: 323.6 bits (828), Expect = 3.0e-85
Identity = 170/241 (70.54%), Postives = 196/241 (81.33%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           M++++ DY+LV +GL VMVAYH+WL YRI+  PN TVIGIN+INRR WV AMME+A K+G
Sbjct: 1   MQQRVLDYVLVPAGLLVMVAYHLWLLYRILXQPNSTVIGINSINRRFWVHAMMEEAPKHG 60

Query: 61  ILAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           +LAVQTLRNNIMASTLLASTAI LCSL+A+L+TSG    + L V GD+S   FSIKFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAITLCSLIALLMTSGTKYRAALFVFGDRSELAFSIKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNVSTHAHHRRLTAEYVATTVNRGSYFWSLG 180
           LVCFLVAFLFNVQSIRYYSHASILIN P K +S H  H  LT +YVATTVNRGSYFWSLG
Sbjct: 121 LVCFLVAFLFNVQSIRYYSHASILINAPCKKMSPHHQHHYLTTDYVATTVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSCLLVFMLYFLDVAFEFCWADG---NLDYVPQRDEEE 239
           LRAFYFSFPL LWIFGPIPMF S  +LV MLYFLDV F+F W  G   N D++  +D+EE
Sbjct: 181 LRAFYFSFPLFLWIFGPIPMFVSCFVLVIMLYFLDVTFQFGWEVGVADNDDHILIKDDEE 240

[Close]
BLAST of CmaCh16G000040 vs. NCBI nr
Match: gi|702487786|ref|XP_010034922.1| (PREDICTED: uncharacterized protein LOC104424252 [Eucalyptus grandis])

HSP 1 Score: 323.2 bits (827), Expect = 4.0e-85
Identity = 170/243 (69.96%), Postives = 195/243 (80.25%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           M+KK+ DY LV SGL +M+AYH WL +RIV+HP+KTV+G+ AINRR WVRAMMED SKNG
Sbjct: 1   MDKKVLDYTLVPSGLFIMMAYHAWLLHRIVKHPDKTVVGVTAINRRFWVRAMMEDVSKNG 60

Query: 61  ILAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           +LAVQTLRNNIMASTLLASTAI L SL+AVL+TSG  ++S L ++GD+S F FS+KFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAITLSSLIAVLMTSGYGNQSSLFIIGDRSKFSFSVKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNVSTHAHHRRLTAEYVATTVNRGSYFWSLG 180
           LVCFLVAFL NVQSIRYYSHASILIN P++ +S H    +  AEYVA TVNRGSYFWSLG
Sbjct: 121 LVCFLVAFLLNVQSIRYYSHASILINVPYRKISQHQQQHQAMAEYVAKTVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSCLLVFMLYFLDVAFEFCWADGNLDYVPQRDEE---E 240
           LR FYFSFPL LWIFGPIPMF S   LVFMLYFLDV+FE  WA    D     D+E   E
Sbjct: 181 LRGFYFSFPLFLWIFGPIPMFLSCFALVFMLYFLDVSFESGWAVEASDDDDDDDDERKDE 240

[Close]
BLAST of CmaCh16G000040 vs. NCBI nr
Match: gi|596040770|ref|XP_007220014.1| (hypothetical protein PRUPE_ppa010476mg [Prunus persica])

HSP 1 Score: 322.8 bits (826), Expect = 5.2e-85
Identity = 172/243 (70.78%), Postives = 191/243 (78.60%), Query Frame = 1 

Query: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60
           M++++ DYILV +GL VMVAYH+WL YRI+  PN T+IGIN+INRR WV AMMEDA KNG
Sbjct: 1   MQERVLDYILVPAGLLVMVAYHLWLLYRIIMQPNNTIIGINSINRRFWVYAMMEDAPKNG 60

Query: 61  ILAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSGGHSESPLVVLGDKSVFGFSIKFFAI 120
           +LAVQTLRNNIMASTLLASTAIML SL+AVL+T G        V G++S   FSIKFFAI
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLSSLIAVLMTGGSKDRKAFFVFGNRSELAFSIKFFAI 120

Query: 121 LVCFLVAFLFNVQSIRYYSHASILINTPFKNVSTHAHHRRLTAEYVATTVNRGSYFWSLG 180
           LVCFLVAFLFNVQSIRYYSHASILIN PFK +S H  H  LTAEYVA TVNRGSYFWSLG
Sbjct: 121 LVCFLVAFLFNVQSIRYYSHASILINAPFKKMSPHHKHHYLTAEYVANTVNRGSYFWSLG 180

Query: 181 LRAFYFSFPLLLWIFGPIPMFSSSCLLVFMLYFLDVAFEFCWADGNLDYVP----QRDEE 240
           LRAFYFSFPL LWIFGPIPMF S  +LV MLYFLDV F+F W  G  D        +DEE
Sbjct: 181 LRAFYFSFPLFLWIFGPIPMFVSCFVLVIMLYFLDVTFQFGWVVGVADEEEHNSLNKDEE 240

The following BLAST results are available for this feature:
BLAST of CmaCh16G000040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh16G000040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEH7_CUCSA2.2e-10682.16Uncharacterized protein OS=Cucumis sativus GN=Csa_3G809950 PE=4 SV=1[more]
A0A058ZWH6_EUCGR2.8e-8569.96Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00049 PE=4 SV=1[more]
M5XIA0_PRUPE3.6e-8570.78Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010476mg PE=4 SV=1[more]
A0A058ZXX6_EUCGR4.7e-8569.83Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00459 PE=4 SV=1[more]
A0A0D2TD29_GOSRA4.0e-8470.04Uncharacterized protein OS=Gossypium raimondii GN=B456_008G263100 PE=4 SV=1[more]
BLAST of CmaCh16G000040 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G24600.11.9e-7768.00 Protein of unknown function, DUF599[more]
AT3G18215.12.2e-5756.48 Protein of unknown function, DUF599[more]
AT4G31330.11.8e-3542.52 Protein of unknown function, DUF599[more]
AT5G10580.17.5e-3440.72 Protein of unknown function, DUF599[more]
AT5G24790.11.9e-3239.62 Protein of unknown function, DUF599[more]
BLAST of CmaCh16G000040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449437922|ref|XP_004136739.1|3.1e-10682.16PREDICTED: uncharacterized protein LOC101204683 [Cucumis sativus][more]
gi|659084794|ref|XP_008443077.1|1.2e-10581.74PREDICTED: uncharacterized protein LOC103486782 [Cucumis melo][more]
gi|657970219|ref|XP_008376849.1|3.0e-8570.54PREDICTED: uncharacterized protein LOC103439971 [Malus domestica][more]
gi|702487786|ref|XP_010034922.1|4.0e-8569.96PREDICTED: uncharacterized protein LOC104424252 [Eucalyptus grandis][more]
gi|596040770|ref|XP_007220014.1|5.2e-8570.78hypothetical protein PRUPE_ppa010476mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006747DUF599
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G000040.1CmaCh16G000040.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006747Protein of unknown function DUF599PFAMPF04654DUF599coord: 9..217
score: 1.6
NoneNo IPR availablePANTHERPTHR31168FAMILY NOT NAMEDcoord: 1..238
score: 4.8E
NoneNo IPR availablePANTHERPTHR31168:SF3SUBFAMILY NOT NAMEDcoord: 1..238
score: 4.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G000040CmoCh16G000030Cucurbita moschata (Rifu)cmacmoB322
CmaCh16G000040Cp4.1LG14g07090Cucurbita pepo (Zucchini)cmacpeB344
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G000040Watermelon (Charleston Gray)cmawcgB305
CmaCh16G000040Watermelon (97103) v1cmawmB315
CmaCh16G000040Bottle gourd (USVL1VR-Ls)cmalsiB330
CmaCh16G000040Silver-seed gourdcarcmaB1366
CmaCh16G000040Watermelon (97103) v2cmawmbB355
CmaCh16G000040Wax gourdcmawgoB0443