CmoCh15G014550 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G014550
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description60S ribosomal protein L7a
LocationCmo_Chr15 : 9867929 .. 9869214 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGGATCTTCTTGCATTTTGAGTGATTTAGACGTTCTAATTGTCGATTTGACGTTTATCATGTCCTTTGTTTTTGACGTTTCACGTTTCTTGGTATTTGTTTTCAAGTGTTTAAGAGTGTTAGTTTTGAATTCATTTTCATGCATTTGCAGCAACAAACTTGTTCAGGATGCTTTTGAAGTATAGGCCAGAGGATAAGGCACAGAAAAGGGAGCGTCTTTTGAAAAGAGCTCAGGAAGAGGCTGAAGGCAAATCACACGATGCCAAAAAGCCTATCGTCGTTAAATATGGTCTCAATCATGTTACCTACCTCATCGAGCAGGTGTTTGTTTATTTCATACGTGCGAAAATCTTCACTCTTTCCAACTGCAATGTTTTCTGTAACTTCAATATAAAACGTACTCTATTTCAGAACAAGGCACAGCTGGTTGTGATAGCACATGATGTGGATCCGATCGAGTTGGTTGTATGGCTCCCAGCTTTGTGCAGGAAGATGGAAATTCCATATTGCATTGTGAAGGGAAAAGCACGATTGGGAGCGGTAACAATTTTCCTTTTAACCCTTTCCTGAAAAACGTTTTCCGAATCGCTGAACCCCGGGGACAGTCATTTGAAAAGTGTTCCTTTTGCAACAGATTGTCCATAAGAAGACTGCATCAGTTTTGTGCTTGACAACAGTTAAGAACGAAGATAAGATGGAGTTCAGCAGGATCCTAGAAGCTATTAAGGTGACTAGCACATTTAAAATAGATATTACTCTTGTCGTGTACCTCTACGTCGAGCTTACTTTTTTAATACGCGTGCTTTAGGCAAACTTCAACGACAAGTACGACGAGTACAGGAAGAAGTGGGGTGGCGGAATCATGGGTTCCAAGTCACAGGCCAAAACCAAAGCAAAGGAGAGGCTCCTTGCCAAGGAAGCAGCTCAAAGGATGTCTTAGGAATTCCCAGACCCAACTCTAGGAGCGAGCAAAGGACAAAGGAGAAGCTTTTAGCAGAGCAGAGGGTGTCAAAGTATGGCTGAGGGAGTCGGTAATGATCTATAACTTGAGCCATTTTTCTCTGATTACAAAGCAGATTTTTCACGAGGCTTGTTTTTGTTTTCAGCTTTTAAGTTTTTTGGATTGTGAAATTTTACTACGAGTTGACATTATGGAATTATTCTATGTGGACACCGATTTTCTCGTATATGTCTTGAGTTATACGTTTGATATCGACATTATGAAATTATACAACATGCACACCTTTTATTGATATTTTCTCGACTTTTTTTATAAATGGAG

mRNA sequence

ATGCTTGGATCTTCTTGCATTTTGAGTGATTTAGACGTTCTAATTGTCGATTTGACGTTTATCATGTCCTTTGTTTTTGACGTTTCACCAACAAACTTGTTCAGGATGCTTTTGAAGTATAGGCCAGAGGATAAGGCACAGAAAAGGGAGCGTCTTTTGAAAAGAGCTCAGGAAGAGGCTGAAGGCAAATCACACGATGCCAAAAAGCCTATCGTCGTTAAATATGGTCTCAATCATGTTACCTACCTCATCGAGCAGGTGTTTGTTTATTTCATACGTGCGAAAATCTTCACTCTTTCCAACTGCAATGTTTTCTGTAACTTCAATATAAAACGTACTCTATTTCAGAACAAGGCACAGCTGGTTGTGATAGCACATGATGTGGATCCGATCGAGTTGGTTGTATGGCTCCCAGCTTTGTGCAGGAAGATGGAAATTCCATATTGCATTGTGAAGGGAAAAGCACGATTGGGAGCGATTGTCCATAAGAAGACTGCATCAGTTTTGTGCTTGACAACAGTTAAGAACGAAGATAAGATGGAGTTCAGCAGGATCCTAGAAGCTATTAAGGTGACTAGCACATTTAAAATAGATATTACTCTTGTCGTGTACCTCTACGTCGAGCTTACTTTTTTAATACGCGCAAACTTCAACGACAAGTACGACGAGTACAGGAAGAAGTGGGGTGGCGGAATCATGGGTTCCAAGTCACAGGCCAAAACCAAAGCAAAGGAGAGGCTCCTTGCCAAGGAAGCAGCTCAAAGGATGTCTTAGGAATTCCCAGACCCAACTCTAGGAGCGAGCAAAGGACAAAGGAGAAGCTTTTAGCAGAGCAGAGGGTGTCAAAGTATGGCTGAGGGAGTCGGTAATGATCTATAACTTGAGCCATTTTTCTCTGATTACAAAGCAGATTTTTCACGAGGCTTGTTTTTGTTTTCAGCTTTTAAGTTTTTTGGATTGTGAAATTTTACTACGAGTTGACATTATGGAATTATTCTATGTGGACACCGATTTTCTCGTATATGTCTTGAGTTATACGTTTGATATCGACATTATGAAATTATACAACATGCACACCTTTTATTGATATTTTCTCGACTTTTTTTATAAATGGAG

Coding sequence (CDS)

ATGCTTGGATCTTCTTGCATTTTGAGTGATTTAGACGTTCTAATTGTCGATTTGACGTTTATCATGTCCTTTGTTTTTGACGTTTCACCAACAAACTTGTTCAGGATGCTTTTGAAGTATAGGCCAGAGGATAAGGCACAGAAAAGGGAGCGTCTTTTGAAAAGAGCTCAGGAAGAGGCTGAAGGCAAATCACACGATGCCAAAAAGCCTATCGTCGTTAAATATGGTCTCAATCATGTTACCTACCTCATCGAGCAGGTGTTTGTTTATTTCATACGTGCGAAAATCTTCACTCTTTCCAACTGCAATGTTTTCTGTAACTTCAATATAAAACGTACTCTATTTCAGAACAAGGCACAGCTGGTTGTGATAGCACATGATGTGGATCCGATCGAGTTGGTTGTATGGCTCCCAGCTTTGTGCAGGAAGATGGAAATTCCATATTGCATTGTGAAGGGAAAAGCACGATTGGGAGCGATTGTCCATAAGAAGACTGCATCAGTTTTGTGCTTGACAACAGTTAAGAACGAAGATAAGATGGAGTTCAGCAGGATCCTAGAAGCTATTAAGGTGACTAGCACATTTAAAATAGATATTACTCTTGTCGTGTACCTCTACGTCGAGCTTACTTTTTTAATACGCGCAAACTTCAACGACAAGTACGACGAGTACAGGAAGAAGTGGGGTGGCGGAATCATGGGTTCCAAGTCACAGGCCAAAACCAAAGCAAAGGAGAGGCTCCTTGCCAAGGAAGCAGCTCAAAGGATGTCTTAG
Homology
[Close]
BLAST of CmoCh15G014550 vs. Swiss-Prot
Match: RL7A1_ORYSJ (60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica GN=RPL7A-1 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 9.7e-74
Identity = 155/227 (68.28%), Postives = 169/227 (74.45%), Query Frame = 1 

Query: 31  TNLFRMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQVFVY 90
           TNLF+MLLKYRPEDKA K+ERLLKRAQ EAEGK+ +AKKPIVVKYGLNHVTYLIEQ    
Sbjct: 86  TNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQ---- 145

Query: 91  FIRAKIFTLSNCNVFCNFNIKRTLFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 150
                                     +KAQLVVIAHDVDPIELVVWLPALCRKME+PYCI
Sbjct: 146 --------------------------SKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCI 205

Query: 151 VKGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKVTSTFKIDITLVVYLYVELT 210
           VKGKARLG+IVHKKTASVLCLTTVKNEDK+EFS+ILEAIK                    
Sbjct: 206 VKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIK-------------------- 258

Query: 211 FLIRANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 258
               ANFNDK+DE RKKWGGG+MGSKSQAKTKA+E+LLAKEAAQRM+
Sbjct: 266 ----ANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKEAAQRMT 258

[Close]
BLAST of CmoCh15G014550 vs. Swiss-Prot
Match: RL7A2_ORYSJ (60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica GN=RPL7A-2 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 9.7e-74
Identity = 155/227 (68.28%), Postives = 169/227 (74.45%), Query Frame = 1 

Query: 31  TNLFRMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQVFVY 90
           TNLF+MLLKYRPEDKA K+ERLLKRAQ EAEGK+ +AKKPIVVKYGLNHVTYLIEQ    
Sbjct: 86  TNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQ---- 145

Query: 91  FIRAKIFTLSNCNVFCNFNIKRTLFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 150
                                     +KAQLVVIAHDVDPIELVVWLPALCRKME+PYCI
Sbjct: 146 --------------------------SKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCI 205

Query: 151 VKGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKVTSTFKIDITLVVYLYVELT 210
           VKGKARLG+IVHKKTASVLCLTTVKNEDK+EFS+ILEAIK                    
Sbjct: 206 VKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIK-------------------- 258

Query: 211 FLIRANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 258
               ANFNDK+DE RKKWGGG+MGSKSQAKTKA+E+LLAKEAAQRM+
Sbjct: 266 ----ANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKEAAQRMT 258

[Close]
BLAST of CmoCh15G014550 vs. Swiss-Prot
Match: RL7A1_ARATH (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana GN=RPL7AA PE=1 SV=2)

HSP 1 Score: 273.1 bits (697), Expect = 3.1e-72
Identity = 150/227 (66.08%), Postives = 168/227 (74.01%), Query Frame = 1 

Query: 31  TNLFRMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQVFVY 90
           T+LF++LLKYRPEDKA K+ERL+K+AQ EAEGK  ++KKPIVVKYGLNHVTYLIEQ    
Sbjct: 85  TSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSESKKPIVVKYGLNHVTYLIEQ---- 144

Query: 91  FIRAKIFTLSNCNVFCNFNIKRTLFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 150
                                     NKAQLVVIAHDVDPIELVVWLPALCRKME+PYCI
Sbjct: 145 --------------------------NKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCI 204

Query: 151 VKGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKVTSTFKIDITLVVYLYVELT 210
           VKGK+RLGA+VH+KTAS LCLTTVKNEDK+EFS+ILEAIK                    
Sbjct: 205 VKGKSRLGAVVHQKTASCLCLTTVKNEDKLEFSKILEAIK-------------------- 257

Query: 211 FLIRANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 258
               ANFNDKY+EYRKKWGGGIMGSKSQAKTKAKER++AKEAAQRM+
Sbjct: 265 ----ANFNDKYEEYRKKWGGGIMGSKSQAKTKAKERVIAKEAAQRMN 257

[Close]
BLAST of CmoCh15G014550 vs. Swiss-Prot
Match: RL7A2_ARATH (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana GN=RPL7AB PE=1 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.2e-71
Identity = 149/227 (65.64%), Postives = 167/227 (73.57%), Query Frame = 1 

Query: 31  TNLFRMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQVFVY 90
           T+LF++LLKYRPEDKA K+ERLL +AQ EAEGK  ++KKPIVVKYGLNHVTYLIEQ    
Sbjct: 84  TSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAESKKPIVVKYGLNHVTYLIEQ---- 143

Query: 91  FIRAKIFTLSNCNVFCNFNIKRTLFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 150
                                     NKAQLVVIAHDVDPIELVVWLPALCRKME+PYCI
Sbjct: 144 --------------------------NKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCI 203

Query: 151 VKGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKVTSTFKIDITLVVYLYVELT 210
           VKGK+RLGA+VH+KTA+ LCLTTVKNEDK+EFS+ILEAIK                    
Sbjct: 204 VKGKSRLGAVVHQKTAAALCLTTVKNEDKLEFSKILEAIK-------------------- 256

Query: 211 FLIRANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 258
               ANFNDKY+EYRKKWGGGIMGSKSQAKTKAKER++AKEAAQRM+
Sbjct: 264 ----ANFNDKYEEYRKKWGGGIMGSKSQAKTKAKERVIAKEAAQRMN 256

[Close]
BLAST of CmoCh15G014550 vs. Swiss-Prot
Match: RL7A_DROME (60S ribosomal protein L7a OS=Drosophila melanogaster GN=RpL7A PE=1 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-38
Identity = 101/224 (45.09%), Postives = 127/224 (56.70%), Query Frame = 1 

Query: 33  LFRMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKK-PIVVKYGLNHVTYLIEQVFVYF 92
           LF++L KYRPE    K+ RL K A+ +A+GK  + KK P  V  G N VT LIEQ     
Sbjct: 100 LFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQ----- 159

Query: 93  IRAKIFTLSNCNVFCNFNIKRTLFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIV 152
                                     KAQLVVIAHDVDP+ELV++LPALCRKM +PYCIV
Sbjct: 160 -------------------------KKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIV 219

Query: 153 KGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKVTSTFKIDITLVVYLYVELTF 212
           KGKARLG +V +KT + L LTTV N DK  F ++LEA+K                     
Sbjct: 220 KGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVK--------------------- 269

Query: 213 LIRANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQR 256
               NFN++++E R+ WGGGI+GSKS A+    ER  A+E AQ+
Sbjct: 280 ---TNFNERHEEIRRHWGGGILGSKSLARISKLERAKARELAQK 269

[Close]
BLAST of CmoCh15G014550 vs. TrEMBL
Match: A0A0A0KPQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171740 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 4.5e-78
Identity = 167/227 (73.57%), Postives = 172/227 (75.77%), Query Frame = 1 

Query: 31  TNLFRMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQVFVY 90
           TNLF+MLLKYRPEDK QK+ERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQ    
Sbjct: 85  TNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQ---- 144

Query: 91  FIRAKIFTLSNCNVFCNFNIKRTLFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 150
                                     NKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI
Sbjct: 145 --------------------------NKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 204

Query: 151 VKGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKVTSTFKIDITLVVYLYVELT 210
           VKGKARLGA+VH+KTASVLCLTTVKNEDKMEFSRILEAIK                    
Sbjct: 205 VKGKARLGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIK-------------------- 257

Query: 211 FLIRANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 258
               ANFNDKYDEYRKKWGGGIMGSKSQAKTKAKE+LLAKEAAQRMS
Sbjct: 265 ----ANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEAAQRMS 257

[Close]
BLAST of CmoCh15G014550 vs. TrEMBL
Match: A0A0A0LBU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G563300 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.7e-77
Identity = 166/227 (73.13%), Postives = 172/227 (75.77%), Query Frame = 1 

Query: 31  TNLFRMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQVFVY 90
           TNLF+MLLKYRPED++QKRERLLKRAQEEA+GK HDAKKPIVVKYGLNHVTYLIEQ    
Sbjct: 85  TNLFKMLLKYRPEDRSQKRERLLKRAQEEADGKPHDAKKPIVVKYGLNHVTYLIEQ---- 144

Query: 91  FIRAKIFTLSNCNVFCNFNIKRTLFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 150
                                     NKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI
Sbjct: 145 --------------------------NKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 204

Query: 151 VKGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKVTSTFKIDITLVVYLYVELT 210
           VKGKARLG+IVHKKTASVLCLTTVKNEDKMEFSRILEAIK                    
Sbjct: 205 VKGKARLGSIVHKKTASVLCLTTVKNEDKMEFSRILEAIK-------------------- 257

Query: 211 FLIRANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 258
               ANFNDKYDEYRKKWGGGIMGSKSQAKTKAKE+LLAKEAAQRMS
Sbjct: 265 ----ANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEAAQRMS 257

[Close]
BLAST of CmoCh15G014550 vs. TrEMBL
Match: A0A0A0KRP5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171730 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 5.0e-77
Identity = 167/227 (73.57%), Postives = 171/227 (75.33%), Query Frame = 1 

Query: 31  TNLFRMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQVFVY 90
           TNLF+MLLKYRPEDK QKRERLLKRAQEEAEGK+ DAKKPIVVKYGLNHVTYLIEQ    
Sbjct: 85  TNLFKMLLKYRPEDKTQKRERLLKRAQEEAEGKTLDAKKPIVVKYGLNHVTYLIEQ---- 144

Query: 91  FIRAKIFTLSNCNVFCNFNIKRTLFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 150
                                     NKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI
Sbjct: 145 --------------------------NKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 204

Query: 151 VKGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKVTSTFKIDITLVVYLYVELT 210
           VKGKARLG+IVHKKTASVLCLTTVKNEDK+EFSRILEAIK                    
Sbjct: 205 VKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSRILEAIK-------------------- 257

Query: 211 FLIRANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 258
               ANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS
Sbjct: 265 ----ANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 257

[Close]
BLAST of CmoCh15G014550 vs. TrEMBL
Match: V7BLC9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G274200g PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.1e-75
Identity = 163/227 (71.81%), Postives = 170/227 (74.89%), Query Frame = 1 

Query: 31  TNLFRMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQVFVY 90
           TNLF+MLLKYRPEDKA+K+ERLLKRAQ EA+GKS +AKKPIVVKYGLNHVTYLIEQ    
Sbjct: 87  TNLFKMLLKYRPEDKAEKKERLLKRAQAEADGKSVEAKKPIVVKYGLNHVTYLIEQ---- 146

Query: 91  FIRAKIFTLSNCNVFCNFNIKRTLFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 150
                                     NKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI
Sbjct: 147 --------------------------NKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 206

Query: 151 VKGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKVTSTFKIDITLVVYLYVELT 210
           VKGKARLG +VHKKTASVLCLTTVKNEDKMEFSRILEAIK                    
Sbjct: 207 VKGKARLGTVVHKKTASVLCLTTVKNEDKMEFSRILEAIK-------------------- 259

Query: 211 FLIRANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 258
               ANFNDKYDEYRKKWGGGIMGSKSQAKT+AKERLLAKEAAQRMS
Sbjct: 267 ----ANFNDKYDEYRKKWGGGIMGSKSQAKTRAKERLLAKEAAQRMS 259

[Close]
BLAST of CmoCh15G014550 vs. TrEMBL
Match: A0A0S3SUW2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G361100 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.0e-74
Identity = 161/227 (70.93%), Postives = 170/227 (74.89%), Query Frame = 1 

Query: 31  TNLFRMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQVFVY 90
           TNLF+MLLKYRPEDKA+K+ERLLKRAQ EA+GKS +AKKPIVVKYGLNHVTYLIEQ    
Sbjct: 85  TNLFKMLLKYRPEDKAEKKERLLKRAQAEADGKSVEAKKPIVVKYGLNHVTYLIEQ---- 144

Query: 91  FIRAKIFTLSNCNVFCNFNIKRTLFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 150
                                     NKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI
Sbjct: 145 --------------------------NKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 204

Query: 151 VKGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKVTSTFKIDITLVVYLYVELT 210
           VKGKARLG +VHKKTASVLCLTTVKNEDK+EFSRILEAIK                    
Sbjct: 205 VKGKARLGTVVHKKTASVLCLTTVKNEDKLEFSRILEAIK-------------------- 257

Query: 211 FLIRANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 258
               ANFNDKYDEYRKKWGGGIMGSKSQAKT+AKE+LLAKEAAQRMS
Sbjct: 265 ----ANFNDKYDEYRKKWGGGIMGSKSQAKTRAKEKLLAKEAAQRMS 257

[Close]
BLAST of CmoCh15G014550 vs. TAIR10
Match: AT2G47610.1 (AT2G47610.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 273.1 bits (697), Expect = 1.8e-73
Identity = 150/227 (66.08%), Postives = 168/227 (74.01%), Query Frame = 1 

Query: 31  TNLFRMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQVFVY 90
           T+LF++LLKYRPEDKA K+ERL+K+AQ EAEGK  ++KKPIVVKYGLNHVTYLIEQ    
Sbjct: 85  TSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSESKKPIVVKYGLNHVTYLIEQ---- 144

Query: 91  FIRAKIFTLSNCNVFCNFNIKRTLFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 150
                                     NKAQLVVIAHDVDPIELVVWLPALCRKME+PYCI
Sbjct: 145 --------------------------NKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCI 204

Query: 151 VKGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKVTSTFKIDITLVVYLYVELT 210
           VKGK+RLGA+VH+KTAS LCLTTVKNEDK+EFS+ILEAIK                    
Sbjct: 205 VKGKSRLGAVVHQKTASCLCLTTVKNEDKLEFSKILEAIK-------------------- 257

Query: 211 FLIRANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 258
               ANFNDKY+EYRKKWGGGIMGSKSQAKTKAKER++AKEAAQRM+
Sbjct: 265 ----ANFNDKYEEYRKKWGGGIMGSKSQAKTKAKERVIAKEAAQRMN 257

[Close]
BLAST of CmoCh15G014550 vs. TAIR10
Match: AT3G62870.1 (AT3G62870.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 271.2 bits (692), Expect = 6.7e-73
Identity = 149/227 (65.64%), Postives = 167/227 (73.57%), Query Frame = 1 

Query: 31  TNLFRMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQVFVY 90
           T+LF++LLKYRPEDKA K+ERLL +AQ EAEGK  ++KKPIVVKYGLNHVTYLIEQ    
Sbjct: 84  TSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAESKKPIVVKYGLNHVTYLIEQ---- 143

Query: 91  FIRAKIFTLSNCNVFCNFNIKRTLFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 150
                                     NKAQLVVIAHDVDPIELVVWLPALCRKME+PYCI
Sbjct: 144 --------------------------NKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCI 203

Query: 151 VKGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKVTSTFKIDITLVVYLYVELT 210
           VKGK+RLGA+VH+KTA+ LCLTTVKNEDK+EFS+ILEAIK                    
Sbjct: 204 VKGKSRLGAVVHQKTAAALCLTTVKNEDKLEFSKILEAIK-------------------- 256

Query: 211 FLIRANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 258
               ANFNDKY+EYRKKWGGGIMGSKSQAKTKAKER++AKEAAQRM+
Sbjct: 264 ----ANFNDKYEEYRKKWGGGIMGSKSQAKTKAKERVIAKEAAQRMN 256

[Close]
BLAST of CmoCh15G014550 vs. NCBI nr
Match: gi|778681609|ref|XP_011651548.1| (PREDICTED: 60S ribosomal protein L7a-2-like isoform X2 [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 5.7e-82
Identity = 174/230 (75.65%), Postives = 181/230 (78.70%), Query Frame = 1 

Query: 31  TNLFRMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQVFVY 90
           TNLF+MLLKYRPED++QKRERLLKRAQEEA+GK HDAKKPIVVKYGLNHVTYLIEQV   
Sbjct: 85  TNLFKMLLKYRPEDRSQKRERLLKRAQEEADGKPHDAKKPIVVKYGLNHVTYLIEQVLFL 144

Query: 91  FIRAKIFTLSNCNVFCNFNIK---RTLFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIP 150
                 FT S       F      + LFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIP
Sbjct: 145 IHSCLAFTYSVVITVWGFKYTHGLKLLFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIP 204

Query: 151 YCIVKGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKVTSTFKIDITLVVYLYV 210
           YCIVKGKARLG+IVHKKTASVLCLTTVKNEDKMEFSRILEAIK                 
Sbjct: 205 YCIVKGKARLGSIVHKKTASVLCLTTVKNEDKMEFSRILEAIK----------------- 264

Query: 211 ELTFLIRANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 258
                  ANFNDKYDEYRKKWGGGIMGSKSQAKTKAKE+LLAKEAAQRMS
Sbjct: 265 -------ANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEAAQRMS 290

[Close]
BLAST of CmoCh15G014550 vs. NCBI nr
Match: gi|659073110|ref|XP_008467259.1| (PREDICTED: 60S ribosomal protein L7a-2 [Cucumis melo])

HSP 1 Score: 302.0 bits (772), Expect = 1.0e-78
Identity = 169/227 (74.45%), Postives = 172/227 (75.77%), Query Frame = 1 

Query: 31  TNLFRMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQVFVY 90
           TNLF+MLLKYRPEDK QKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQ    
Sbjct: 85  TNLFKMLLKYRPEDKTQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQ---- 144

Query: 91  FIRAKIFTLSNCNVFCNFNIKRTLFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 150
                                     NKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI
Sbjct: 145 --------------------------NKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 204

Query: 151 VKGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKVTSTFKIDITLVVYLYVELT 210
           VKGKARLGA+VHKKTASVLCLTTVKNEDKMEFSRILEAIK                    
Sbjct: 205 VKGKARLGAVVHKKTASVLCLTTVKNEDKMEFSRILEAIK-------------------- 257

Query: 211 FLIRANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 258
               ANFNDKYDEYRKKWGGGIMGSKSQAKTKAKE+LLAKEAAQRMS
Sbjct: 265 ----ANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEAAQRMS 257

[Close]
BLAST of CmoCh15G014550 vs. NCBI nr
Match: gi|449451797|ref|XP_004143647.1| (PREDICTED: 60S ribosomal protein L7a-like [Cucumis sativus])

HSP 1 Score: 299.3 bits (765), Expect = 6.5e-78
Identity = 167/227 (73.57%), Postives = 172/227 (75.77%), Query Frame = 1 

Query: 31  TNLFRMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQVFVY 90
           TNLF+MLLKYRPEDK QK+ERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQ    
Sbjct: 85  TNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQ---- 144

Query: 91  FIRAKIFTLSNCNVFCNFNIKRTLFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 150
                                     NKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI
Sbjct: 145 --------------------------NKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 204

Query: 151 VKGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKVTSTFKIDITLVVYLYVELT 210
           VKGKARLGA+VH+KTASVLCLTTVKNEDKMEFSRILEAIK                    
Sbjct: 205 VKGKARLGAVVHQKTASVLCLTTVKNEDKMEFSRILEAIK-------------------- 257

Query: 211 FLIRANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 258
               ANFNDKYDEYRKKWGGGIMGSKSQAKTKAKE+LLAKEAAQRMS
Sbjct: 265 ----ANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEAAQRMS 257

[Close]
BLAST of CmoCh15G014550 vs. NCBI nr
Match: gi|645250159|ref|XP_008231079.1| (PREDICTED: 60S ribosomal protein L7a isoform X1 [Prunus mume])

HSP 1 Score: 298.1 bits (762), Expect = 1.5e-77
Identity = 171/230 (74.35%), Postives = 185/230 (80.43%), Query Frame = 1 

Query: 31  TNLFRMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQV-FV 90
           T+LF+MLLKYRPEDKA K+ERLLKRAQ E+EGK+ +AKKPIVVKYGLNHVTYLIEQV F 
Sbjct: 86  TSLFKMLLKYRPEDKAAKKERLLKRAQAESEGKTVEAKKPIVVKYGLNHVTYLIEQVLFP 145

Query: 91  YFIRAKIF--TLSNCNVFCNFNIKRTLFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIP 150
                 IF   +S CN FC F+I   L QNKAQLVVIAHDVDPIELVVWLPALCRKMEIP
Sbjct: 146 ATCMCFIFLVNVSLCNDFC-FSIAFCL-QNKAQLVVIAHDVDPIELVVWLPALCRKMEIP 205

Query: 151 YCIVKGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKVTSTFKIDITLVVYLYV 210
           YCIVKGKARLG+IVHKKTASVLCLTTVKNEDK+EFS++LEAIK                 
Sbjct: 206 YCIVKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKVLEAIK----------------- 265

Query: 211 ELTFLIRANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 258
                  ANFNDKYDEYRKKWGGGIMGSKSQAKT+AKERLLAKEAAQRM+
Sbjct: 266 -------ANFNDKYDEYRKKWGGGIMGSKSQAKTRAKERLLAKEAAQRMN 289

[Close]
BLAST of CmoCh15G014550 vs. NCBI nr
Match: gi|449460549|ref|XP_004148008.1| (PREDICTED: 60S ribosomal protein L7a-2-like isoform X1 [Cucumis sativus])

HSP 1 Score: 297.4 bits (760), Expect = 2.5e-77
Identity = 166/227 (73.13%), Postives = 172/227 (75.77%), Query Frame = 1 

Query: 31  TNLFRMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQVFVY 90
           TNLF+MLLKYRPED++QKRERLLKRAQEEA+GK HDAKKPIVVKYGLNHVTYLIEQ    
Sbjct: 85  TNLFKMLLKYRPEDRSQKRERLLKRAQEEADGKPHDAKKPIVVKYGLNHVTYLIEQ---- 144

Query: 91  FIRAKIFTLSNCNVFCNFNIKRTLFQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 150
                                     NKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI
Sbjct: 145 --------------------------NKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCI 204

Query: 151 VKGKARLGAIVHKKTASVLCLTTVKNEDKMEFSRILEAIKVTSTFKIDITLVVYLYVELT 210
           VKGKARLG+IVHKKTASVLCLTTVKNEDKMEFSRILEAIK                    
Sbjct: 205 VKGKARLGSIVHKKTASVLCLTTVKNEDKMEFSRILEAIK-------------------- 257

Query: 211 FLIRANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 258
               ANFNDKYDEYRKKWGGGIMGSKSQAKTKAKE+LLAKEAAQRMS
Sbjct: 265 ----ANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEAAQRMS 257

The following BLAST results are available for this feature:
BLAST of CmoCh15G014550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL7A1_ORYSJ9.7e-7468.2860S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica GN=RPL7A-1 PE=2 SV=1[more]
RL7A2_ORYSJ9.7e-7468.2860S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica GN=RPL7A-2 PE=2 SV=1[more]
RL7A1_ARATH3.1e-7266.0860S ribosomal protein L7a-1 OS=Arabidopsis thaliana GN=RPL7AA PE=1 SV=2[more]
RL7A2_ARATH1.2e-7165.6460S ribosomal protein L7a-2 OS=Arabidopsis thaliana GN=RPL7AB PE=1 SV=1[more]
RL7A_DROME1.7e-3845.0960S ribosomal protein L7a OS=Drosophila melanogaster GN=RpL7A PE=1 SV=2[more]
BLAST of CmoCh15G014550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPQ6_CUCSA4.5e-7873.57Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171740 PE=4 SV=1[more]
A0A0A0LBU9_CUCSA1.7e-7773.13Uncharacterized protein OS=Cucumis sativus GN=Csa_3G563300 PE=4 SV=1[more]
A0A0A0KRP5_CUCSA5.0e-7773.57Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171730 PE=4 SV=1[more]
V7BLC9_PHAVU2.1e-7571.81Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G274200g PE=4 SV=1[more]
A0A0S3SUW2_PHAAN1.0e-7470.93Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G361100 PE=... [more]
BLAST of CmoCh15G014550 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G47610.11.8e-7366.08 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein[more]
AT3G62870.16.7e-7365.64 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein[more]
BLAST of CmoCh15G014550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778681609|ref|XP_011651548.1|5.7e-8275.65PREDICTED: 60S ribosomal protein L7a-2-like isoform X2 [Cucumis sativus][more]
gi|659073110|ref|XP_008467259.1|1.0e-7874.45PREDICTED: 60S ribosomal protein L7a-2 [Cucumis melo][more]
gi|449451797|ref|XP_004143647.1|6.5e-7873.57PREDICTED: 60S ribosomal protein L7a-like [Cucumis sativus][more]
gi|645250159|ref|XP_008231079.1|1.5e-7774.35PREDICTED: 60S ribosomal protein L7a isoform X1 [Prunus mume][more]
gi|449460549|ref|XP_004148008.1|2.5e-7773.13PREDICTED: 60S ribosomal protein L7a-2-like isoform X1 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001921Ribosomal_L7A/L8
IPR004037Ribosomal_L7Ae_CS
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
Vocabulary: Cellular Component
TermDefinition
GO:0030529intracellular ribonucleoprotein complex
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0005840 ribosome
cellular_component GO:1990904 ribonucleoprotein complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G014550.1CmoCh15G014550.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001921Ribosomal protein L7A/L8PRINTSPR00882RIBOSOMALL7Acoord: 35..48
score: 4.0E-9coord: 69..89
score: 4.
IPR004037Ribosomal protein L7Ae conserved sitePROSITEPS01082RIBOSOMAL_L7AEcoord: 141..158
scor
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 113..181
score: 2.5
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 116..190
score: 9.7E-98coord: 31..99
score: 9.7E-98coord: 215..256
score: 9.7
NoneNo IPR availablePANTHERPTHR23105:SF41SUBFAMILY NOT NAMEDcoord: 116..190
score: 9.7E-98coord: 215..256
score: 9.7E-98coord: 31..99
score: 9.7