Carg08458 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08458
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	60S ribosomal protein L7a-like
Location	Cucurbita_argyrosperma_scaffold_022 : 434888 .. 438256 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGAATGTTTTCAGGTGAAGGTGGTGAATCCACTATTCGAGAAGCGTCCGAAGCAGTTTGGAATCGGCGGGGCATTGCCGCCTAAGAGGGATCTGACAAGGTTCGTCAAATGGCCGAAAGCTGTTCAAATTCAGAGGAAGAAAAGGATTCTTAAGCAGAGGCTCAAGGTTCCACCTGCTTTGAATCAGTTCACCAAGACACTTGACAAGAATCTTGGTAATAAAATCGAATAACTATGTTAAAAGATTAGTCGAGATTTTTTATATCAAATTCTATCCTTCTCTGTTTTTGCAGTACGCTGAAACTCTCTCCTTTGTAATTAAGCATGAGATTTGTTTGGTTAAAGGAGCTACGATTAGGTGTTAAGGTTCCCGACCTTATTGTTGAAGGTTTGGTTTGGCTACATTGAGATACTATGTTTTGGTTGACAATGCAAGTTAAATATGGGACTTGGTTGCGGACTCTGATCTCTCAGAATCTTGATCCTTGACCAAACCTTATTTCCTGCTAGGTTTCTTGGACTATGTTTAGACCTTTTCACATTTTTGGTCATTCAGAAGTTCTAATGGTTGAATTTATTAATAGTTTCGCTCTAGACAAACGTCCTTTATGGTACTCGGTCGCAAATTGATTTTGTGTCTCTCCTGATTCCATCAAGTTCATCTGGTCATCTTCTTGGTTTCGGTTGTATATGATTGCCTTGTTTTCTTACTGTTTGTTGTATATGATTGCCTTGTTTTCTTACTGTTTGTTGCCTTGTTTTCTTACTGTTTGTTGTGAAAGTGTTTATTGTGTTGGTTTTAAATACCTTGTCACTCTTATGCAGCAACAAACTTGTTCAAGATGCTTCTGAAGTATAGGCCAGAGGATAAAGCACAGAAGAGGGAGCGTCTTTTGAAGAGAGCGCAGGAAGAGGCCGAAGGCAAATCACATGATGCAAAAAAGCCTATTGTTGTTAAGTATGGTCTCAACCATGTAACCTACCTCATCGAGCAGGTGAACTTCTATTCGTATTCATACATGTGAAACGTTTCACTCTTTTCAATTGCAATGTTTATCCGTGATCTGATACACTCCTGTATTTATAACTGCCACGTAAAATTTACTTTCTTTTTAGAACAAGGCACAGCTCGTTGTGATAGCGCACGATGTGGATCCGATTGAGTTGGTCGTTTGGCTCCCAGCTTTGTGCAGGAAGATGGAAATCCCATATTGCATTGTGAAGGGAAAAGCAAGATTGGGAGCGGTAACCTTTTTCTTTTCGTTTTCCCGAACGCACATTTCCAATTCTATTAATCCCAGGAACAGCTGTTTGAAATTTGTTTCCTTTTTATAGATTGTCCATCAAAAGACTGCATCAGTTTTGTGCTTGACAACCGTAAAGAACGAAGATAAGTTGGAGTTCAGCAGAATCCTTGAAGCGATAAAGGTGACTAGCACATTTAAAACATATGCTACACTTGACTAGTCCATCTATGTATAGCTTTTCTTAATACCATTGCTGCTATCTGTTCTGTTTGTGAAGGCCAACTTCAACGACAAGTACGACGAGTACAGGAAGAAGTGGGGCGGTGGAATCATGGGTTCTAAGTCACAGGCCAAAACCAAAGCAAAGGAGAGGCTCCTTGCCAAGGAAGCTGCTCAAAGGATGTCTTAGGAATTCACAGGCAATGACAAAGGAGAGAAGCTTTTGGCAGAGCCAGAGGATGTCAAAGGATGGCTTAGGAATCGGTAACGAGCTCGTCTAACTTAAGTCAATTATCTTCGATTAAAAAAAAGGATCGACGAGGCTTGTCATTTTTATTTTCAGCTTTAAGTTTATTGGATTGAGAAAGTTTAGTCTGTTCTACGAGTTCTACATGTTCAAAGCAAGACCTCATGAAGTTATTCTATTTGGACGCCACTTTTTTTTTGCTTGAACTGTGTGTTATATGACGTTTGGCCTTAATTTTGAATGAAGCCTCCTATTACTTGACATAATAAATGAGACAAAAAGTACGACATAGAATCGAGATTCGACTCTTTAAGAGCATTTTTCGGAACAACTTTGAAGGTCTTAGAACAATCCTTTCAAGGCTCCAACATATTTATCTGGGTAATTTGACCTCTTTCTTCTAATATAAATGAGCAAAAACAACAAGATATACAGAATCATGTTGGATTCTGATCAGGGAGAGGTAAGTTTAACCTCTTGAAACAGGTAAAGCCGCCATCAACCACCAAATTGTGCCCACTTACATACTTTGCATCATCAGATGCAAGATAAAGTGCGGCATTGGCTATATCATTAGTCTCACAAACTGCCCCTTCCAAAGCACTCAAATCAAATATCATCTTCTCAAGTTTCTCCTTCTCAGTTCCAGGAAAAAAGCGACACATTTCGTTGATAGAAAATGGTGTCGGGATCGCAAATGGTGATATGCAATTCACTCGAATACCATATTTACACAACTCCGATGCCATGGACTTGACAATACCGGTAACAGCGACCTTTGACACAGAATACGTATGTTGAGCTAACCCACCCATCACTCCTGTGACACTAGCCGTGCATAAAATTGATCCTGATTGTTGAGGGATCATAACACGAGAGGCGTGCTTGATACCAGCTAGAACACCTCGGACATTAATGTTCATAACTTTATCGAATACGGCAAGGTCGAGGTCCAAAATGCTTGGAGGAGTATTGCAAGCAATCCCAGCATTGTTGTACATTATGTCAAGCCTTTTGTGAAGAGAGAGAGCGAAATCTACAGCATCAGAGACATTGGCCTCGTTGCTGACATCACAAGGGATGAAGGTAGCGTTGGGGCCAAGCTGCTTGGCCGTCGCTTGGCCAAGCTCTTCCTCGACATCCGCCAACACAACTTTGGCTCCATTGCTTATGAATTTGGATGCCGTTGCCTTCCCAATGCCGCTGGCTGCGCCTGTAATCAGCGCAATCTTGCCTTCAAGCCTGCATATCCCAATCCAAATCTAACCCATGTCAAGAACATTGAAGGTTTTGGAAGAGAGTATAATAAACAAACTCACCTTCCAGCATGGGAAGACAATCCCCTATTGAAGAAGCTCAAAGTAAGCGAATTCCTTACGAGATGACTCCGAATCATGGCGTTTCAGAAGGTTTGAATGAGGAGAGCTCGGATGGGGCTTCAATGGCGGATACAGAGTGATCCCATTTGAATAACTTAGGAAGGGAATGGGGAAAAGGTGCTTTTAAAAACAGGGGAGTTGATAAGGAATCTTGTTTGTAGCTTTGACTTTTCTGTTTGGGTCATTAATGTCTTGGATGAGTTGTATAGTGAAGAGGGCACATTTGTTTGTGTGTAGTGACCCATTTGTCTTTTGGATTCTTGGTAAAATCC

mRNA sequence

ATGTTGGAATGTTTTCAGGTGAAGGTGGTGAATCCACTATTCGAGAAGCGTCCGAAGCAGTTTGGAATCGGCGGGGCATTGCCGCCTAAGAGGGATCTGACAAGGTTCGTCAAATGGCCGAAAGCTGTTCAAATTCAGAGGAAGAAAAGGATTCTTAAGCAGAGGCTCAAGGTTCCACCTGCTTTGAATCAGTTCACCAAGACACTTGACAAGAATCTTGCAACAAACTTGTTCAAGATGCTTCTGAAGTATAGGCCAGAGGATAAAGCACAGAAGAGGGAGCGTCTTTTGAAGAGAGCGCAGGAAGAGGCCGAAGGCAAATCACATGATGCAAAAAAGCCTATTGTTGTTAAGTATGGTCTCAACCATGTAACCTACCTCATCGAGCAGGCACAGCTCGTTGTGATAGCGCACGATGTGGATCCGATTGAGTTGGTCGTTTGGCTCCCAGCTTTGTGCAGGAAGATGGAAATCCCATATTGCATTGTGAAGGGAAAAGCAAGATTGGGAGCGATTGTCCATCAAAAGACTGCATCAGTTTTGTGCTTGACAACCGTAAAGAACGAAGATAAGTTGGAGTTCAGCAGAATCCTTGAAGCGATAAAGGCCAACTTCAACGACAAGTACGACGAGTACAGGAAGAAGTGGGGCGGTGGAATCATGGGTTCTAAGTCACAGGCCAAAACCAAAGCAAAGGAGAGGCTCCTTGCCAAGGAAGCTGCTCAAAGGATGTCTTAGGAATTCACAGGCAATGACAAAGGAGAGAAGCTTTTGGCAGAGCCAGAGGATGTCAAAGGATGGCTTAGGAATCGGTAACGAGCTCGTCTAACTTAAGTCAATTATCTTCGATTAAAAAAAAGGATCGACGAGGCTTGTCATTTTTATTTTCAGCTTTAAGTTTATTGGATTGAGAAAGTTTAGTCTGTTCTACGAGTTCTACATGTTCAAAGCAAGACCTCATGAAGTTATTCTATTTGGACGCCACTTTTTTTTTGCTTGAACTGTGTGTTATATGACGTTTGGCCTTAATTTTGAATGAAGCCTCCTATTACTTGACATAATAAATGAGACAAAAAGTACGACATAGAATCGAGATTCGACTCTTTAAGAGCATTTTTCGGAACAACTTTGAAGGTCTTAGAACAATCCTTTCAAGGCTCCAACATATTTATCTGGGTAATTTGACCTCTTTCTTCTAATATAAATGAGCAAAAACAACAAGATATACAGAATCATGTTGGATTCTGATCAGGGAGAGGTAAGTTTAACCTCTTGAAACAGGTAAAGCCGCCATCAACCACCAAATTGTGCCCACTTACATACTTTGCATCATCAGATGCAAGATAAAGTGCGGCATTGGCTATATCATTAGTCTCACAAACTGCCCCTTCCAAAGCACTCAAATCAAATATCATCTTCTCAAGTTTCTCCTTCTCAGTTCCAGGAAAAAAGCGACACATTTCGTTGATAGAAAATGGTGTCGGGATCGCAAATGGTGATATGCAATTCACTCGAATACCATATTTACACAACTCCGATGCCATGGACTTGACAATACCGGTAACAGCGACCTTTGACACAGAATACGTATGTTGAGCTAACCCACCCATCACTCCTGTGACACTAGCCGTGCATAAAATTGATCCTGATTGTTGAGGGATCATAACACGAGAGGCGTGCTTGATACCAGCTAGAACACCTCGGACATTAATGTTCATAACTTTATCGAATACGGCAAGGTCGAGGTCCAAAATGCTTGGAGGAGTATTGCAAGCAATCCCAGCATTGTTGTACATTATGTCAAGCCTTTTGTGAAGAGAGAGAGCGAAATCTACAGCATCAGAGACATTGGCCTCGTTGCTGACATCACAAGGGATGAAGGTAGCGTTGGGGCCAAGCTGCTTGGCCGTCGCTTGGCCAAGCTCTTCCTCGACATCCGCCAACACAACTTTGGCTCCATTGCTTATGAATTTGGATGCCGTTGCCTTCCCAATGCCGCTGGCTGCGCCTGTAATCAGCGCAATCTTGCCTTCAAGCCTGCATATCCCAATCCAAATCTAACCCATGTCAAGAACATTGAAGGTTTTGGAAGAGAGTATAATAAACAAACTCACCTTCCAGCATGGGAAGACAATCCCCTATTGAAGAAGCTCAAAGTAAGCGAATTCCTTACGAGATGACTCCGAATCATGGCGTTTCAGAAGGTTTGAATGAGGAGAGCTCGGATGGGGCTTCAATGGCGGATACAGAGTGATCCCATTTGAATAACTTAGGAAGGGAATGGGGAAAAGGTGCTTTTAAAAACAGGGGAGTTGATAAGGAATCTTGTTTGTAGCTTTGACTTTTCTGTTTGGGTCATTAATGTCTTGGATGAGTTGTATAGTGAAGAGGGCACATTTGTTTGTGTGTAGTGACCCATTTGTCTTTTGGATTCTTGGTAAAATCC

Coding sequence (CDS)

ATGTTGGAATGTTTTCAGGTGAAGGTGGTGAATCCACTATTCGAGAAGCGTCCGAAGCAGTTTGGAATCGGCGGGGCATTGCCGCCTAAGAGGGATCTGACAAGGTTCGTCAAATGGCCGAAAGCTGTTCAAATTCAGAGGAAGAAAAGGATTCTTAAGCAGAGGCTCAAGGTTCCACCTGCTTTGAATCAGTTCACCAAGACACTTGACAAGAATCTTGCAACAAACTTGTTCAAGATGCTTCTGAAGTATAGGCCAGAGGATAAAGCACAGAAGAGGGAGCGTCTTTTGAAGAGAGCGCAGGAAGAGGCCGAAGGCAAATCACATGATGCAAAAAAGCCTATTGTTGTTAAGTATGGTCTCAACCATGTAACCTACCTCATCGAGCAGGCACAGCTCGTTGTGATAGCGCACGATGTGGATCCGATTGAGTTGGTCGTTTGGCTCCCAGCTTTGTGCAGGAAGATGGAAATCCCATATTGCATTGTGAAGGGAAAAGCAAGATTGGGAGCGATTGTCCATCAAAAGACTGCATCAGTTTTGTGCTTGACAACCGTAAAGAACGAAGATAAGTTGGAGTTCAGCAGAATCCTTGAAGCGATAAAGGCCAACTTCAACGACAAGTACGACGAGTACAGGAAGAAGTGGGGCGGTGGAATCATGGGTTCTAAGTCACAGGCCAAAACCAAAGCAAAGGAGAGGCTCCTTGCCAAGGAAGCTGCTCAAAGGATGTCTTAG

Protein sequence

MLECFQVKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS

Homology

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BLAST of Carg08458 vs. NCBI nr
Match: XP_022958469.1 (60S ribosomal protein L7a-2-like [Cucurbita moschata])

HSP 1 Score: 456.8 bits (1174), Expect = 4.5e-125
Identity = 239/241 (99.17%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 7   VKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFT 66
           VKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFT
Sbjct: 17  VKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFT 76

Query: 67  KTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTY 126
           KTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTY
Sbjct: 77  KTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTY 136

Query: 127 LIEQ--AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLT 186
           LIEQ  AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLT
Sbjct: 137 LIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLT 196

Query: 187 TVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRM 246
           TVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRM
Sbjct: 197 TVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRM 256

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BLAST of Carg08458 vs. NCBI nr
Match: XP_022995921.1 (60S ribosomal protein L7a-2-like [Cucurbita maxima] >XP_023534150.1 60S ribosomal protein L7a-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 456.8 bits (1174), Expect = 4.5e-125
Identity = 239/241 (99.17%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 7   VKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFT 66
           VKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFT
Sbjct: 17  VKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFT 76

Query: 67  KTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTY 126
           KTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTY
Sbjct: 77  KTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTY 136

Query: 127 LIEQ--AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLT 186
           LIEQ  AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLT
Sbjct: 137 LIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLT 196

Query: 187 TVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRM 246
           TVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRM
Sbjct: 197 TVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRM 256

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BLAST of Carg08458 vs. NCBI nr
Match: XP_022928907.1 (60S ribosomal protein L7a-2 isoform X2 [Cucurbita moschata] >XP_022970186.1 60S ribosomal protein L7a-2 [Cucurbita maxima] >XP_022970187.1 60S ribosomal protein L7a-2 [Cucurbita maxima] >XP_023551211.1 60S ribosomal protein L7a-2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 455.3 bits (1170), Expect = 1.3e-124
Identity = 238/240 (99.17%), Postives = 238/240 (99.17%), Query Frame = 0


Query: 8   KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK 67
           KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK
Sbjct: 18  KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK 77

Query: 68  TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL 127
           TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL
Sbjct: 78  TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL 137

Query: 128 IEQ--AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT 187
           IEQ  AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT
Sbjct: 138 IEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT 197

Query: 188 VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 246
           VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS
Sbjct: 198 VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 257

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BLAST of Carg08458 vs. NCBI nr
Match: XP_022934368.1 (60S ribosomal protein L7a-2 [Cucurbita moschata] >XP_023527406.1 60S ribosomal protein L7a-2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 454.1 bits (1167), Expect = 2.9e-124
Identity = 237/240 (98.75%), Postives = 238/240 (99.17%), Query Frame = 0


Query: 8   KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK 67
           KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK
Sbjct: 18  KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK 77

Query: 68  TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL 127
           TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGK+HDAKKPIVVKYGLNHVTYL
Sbjct: 78  TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKAHDAKKPIVVKYGLNHVTYL 137

Query: 128 IEQ--AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT 187
           IEQ  AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT
Sbjct: 138 IEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT 197

Query: 188 VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 246
           VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS
Sbjct: 198 VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 257

[Close]

BLAST of Carg08458 vs. NCBI nr
Match: XP_022983551.1 (60S ribosomal protein L7a-2-like [Cucurbita maxima])

HSP 1 Score: 453.0 bits (1164), Expect = 6.5e-124
Identity = 236/240 (98.33%), Postives = 238/240 (99.17%), Query Frame = 0


Query: 8   KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK 67
           KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK
Sbjct: 18  KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK 77

Query: 68  TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL 127
           TLDKNLATNLFKMLLKYRPEDKAQKRERL+KRAQEEAEGK+HDAKKPIVVKYGLNHVTYL
Sbjct: 78  TLDKNLATNLFKMLLKYRPEDKAQKRERLVKRAQEEAEGKAHDAKKPIVVKYGLNHVTYL 137

Query: 128 IEQ--AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT 187
           IEQ  AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT
Sbjct: 138 IEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT 197

Query: 188 VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 246
           VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS
Sbjct: 198 VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 257

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BLAST of Carg08458 vs. TAIR10
Match: AT2G47610.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 412.9 bits (1060), Expect = 1.4e-115
Identity = 207/240 (86.25%), Postives = 232/240 (96.67%), Query Frame = 0


Query: 8   KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK 67
           KV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK++++QR+KRILKQRLKVPPALNQFTK
Sbjct: 18  KVSNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRILKQRLKVPPALNQFTK 77

Query: 68  TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL 127
           TLDKNLAT+LFK+LLKYRPEDKA K+ERL+K+AQ EAEGK  ++KKPIVVKYGLNHVTYL
Sbjct: 78  TLDKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSESKKPIVVKYGLNHVTYL 137

Query: 128 IEQ--AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT 187
           IEQ  AQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+RLGA+VHQKTAS LCLTT
Sbjct: 138 IEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGAVVHQKTASCLCLTT 197

Query: 188 VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 246
           VKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAKTKAKER++AKEAAQRM+
Sbjct: 198 VKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKTKAKERVIAKEAAQRMN 257

[Close]

BLAST of Carg08458 vs. TAIR10
Match: AT3G62870.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 411.8 bits (1057), Expect = 3.0e-115
Identity = 206/240 (85.83%), Postives = 231/240 (96.25%), Query Frame = 0


Query: 8   KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK 67
           KV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK++++QR+KRILKQRLKVPPALNQFTK
Sbjct: 17  KVTNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRILKQRLKVPPALNQFTK 76

Query: 68  TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL 127
           TLDKNLAT+LFK+LLKYRPEDKA K+ERLL +AQ EAEGK  ++KKPIVVKYGLNHVTYL
Sbjct: 77  TLDKNLATSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAESKKPIVVKYGLNHVTYL 136

Query: 128 IEQ--AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT 187
           IEQ  AQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+RLGA+VHQKTA+ LCLTT
Sbjct: 137 IEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGAVVHQKTAAALCLTT 196

Query: 188 VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 246
           VKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAKTKAKER++AKEAAQRM+
Sbjct: 197 VKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKTKAKERVIAKEAAQRMN 256

[Close]

BLAST of Carg08458 vs. Swiss-Prot
Match: sp|P35685|RL7A1_ORYSJ (60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 PE=2 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 1.0e-115
Identity = 214/240 (89.17%), Postives = 231/240 (96.25%), Query Frame = 0


Query: 8   KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK 67
           KV NPLFEKRPKQFGIGGALPPK+DL RFVKWPK V+IQR++RILKQRLKVPPALNQFT+
Sbjct: 19  KVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTR 78

Query: 68  TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL 127
           TLDKNLATNLFKMLLKYRPEDKA K+ERLLKRAQ EAEGK+ +AKKPIVVKYGLNHVTYL
Sbjct: 79  TLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYL 138

Query: 128 IEQ--AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT 187
           IEQ  AQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGKARLG+IVH+KTASVLCLTT
Sbjct: 139 IEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKTASVLCLTT 198

Query: 188 VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 246
           VKNEDKLEFS+ILEAIKANFNDK+DE RKKWGGG+MGSKSQAKTKA+E+LLAKEAAQRM+
Sbjct: 199 VKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKEAAQRMT 258

[Close]

BLAST of Carg08458 vs. Swiss-Prot
Match: sp|P0DKK7|RL7A2_ORYSJ (60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 PE=2 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 1.0e-115
Identity = 214/240 (89.17%), Postives = 231/240 (96.25%), Query Frame = 0


Query: 8   KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK 67
           KV NPLFEKRPKQFGIGGALPPK+DL RFVKWPK V+IQR++RILKQRLKVPPALNQFT+
Sbjct: 19  KVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTR 78

Query: 68  TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL 127
           TLDKNLATNLFKMLLKYRPEDKA K+ERLLKRAQ EAEGK+ +AKKPIVVKYGLNHVTYL
Sbjct: 79  TLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYL 138

Query: 128 IEQ--AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT 187
           IEQ  AQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGKARLG+IVH+KTASVLCLTT
Sbjct: 139 IEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKTASVLCLTT 198

Query: 188 VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 246
           VKNEDKLEFS+ILEAIKANFNDK+DE RKKWGGG+MGSKSQAKTKA+E+LLAKEAAQRM+
Sbjct: 199 VKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKEAAQRMT 258

[Close]

BLAST of Carg08458 vs. Swiss-Prot
Match: sp|P49692|RL7A1_ARATH (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2)

HSP 1 Score: 412.9 bits (1060), Expect = 2.5e-114
Identity = 207/240 (86.25%), Postives = 232/240 (96.67%), Query Frame = 0


Query: 8   KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK 67
           KV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK++++QR+KRILKQRLKVPPALNQFTK
Sbjct: 18  KVSNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRILKQRLKVPPALNQFTK 77

Query: 68  TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL 127
           TLDKNLAT+LFK+LLKYRPEDKA K+ERL+K+AQ EAEGK  ++KKPIVVKYGLNHVTYL
Sbjct: 78  TLDKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSESKKPIVVKYGLNHVTYL 137

Query: 128 IEQ--AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT 187
           IEQ  AQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+RLGA+VHQKTAS LCLTT
Sbjct: 138 IEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGAVVHQKTASCLCLTT 197

Query: 188 VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 246
           VKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAKTKAKER++AKEAAQRM+
Sbjct: 198 VKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKTKAKERVIAKEAAQRMN 257

[Close]

BLAST of Carg08458 vs. Swiss-Prot
Match: sp|Q9LZH9|RL7A2_ARATH (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=2 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 5.5e-114
Identity = 206/240 (85.83%), Postives = 231/240 (96.25%), Query Frame = 0


Query: 8   KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK 67
           KV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK++++QR+KRILKQRLKVPPALNQFTK
Sbjct: 17  KVTNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRILKQRLKVPPALNQFTK 76

Query: 68  TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL 127
           TLDKNLAT+LFK+LLKYRPEDKA K+ERLL +AQ EAEGK  ++KKPIVVKYGLNHVTYL
Sbjct: 77  TLDKNLATSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAESKKPIVVKYGLNHVTYL 136

Query: 128 IEQ--AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT 187
           IEQ  AQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+RLGA+VHQKTA+ LCLTT
Sbjct: 137 IEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGAVVHQKTAAALCLTT 196

Query: 188 VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 246
           VKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAKTKAKER++AKEAAQRM+
Sbjct: 197 VKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKTKAKERVIAKEAAQRMN 256

[Close]

BLAST of Carg08458 vs. Swiss-Prot
Match: sp|O57592|RL7A_TAKRU (60S ribosomal protein L7a OS=Takifugu rubripes OX=31033 GN=rpl7a PE=3 SV=3)

HSP 1 Score: 275.8 bits (704), Expect = 4.7e-73
Identity = 141/240 (58.75%), Postives = 186/240 (77.50%), Query Frame = 0


Query: 8   KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK 67
           KVVNPLFEKRPK FGIG  + PKRDLTRFVKWP+ +++QR++ IL +RLKVPPA+NQFT+
Sbjct: 26  KVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRSILYKRLKVPPAINQFTQ 85

Query: 68  TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSH-DAKKPIVVKYGLNHVTY 127
            LD+  AT LFK+  KYRPE K +K++RLL RA+++A GK     K+P V++ G+N +T 
Sbjct: 86  ALDRQTATQLFKLAHKYRPETKQEKKKRLLARAEQKAAGKGDAPTKRPPVLRAGVNTITS 145

Query: 128 LIE--QAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLT 187
           L+E  +AQLVVIAHDVDPIELV++LPALCRKM +PYCIVKGKARLG +VH+KT + +  T
Sbjct: 146 LVENKKAQLVVIAHDVDPIELVIFLPALCRKMGVPYCIVKGKARLGRLVHRKTCTSVAFT 205

Query: 188 TVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRM 245
               EDK   ++++EAIK N+ND+Y+E R+ WGGGI+G KS A+    E+  AKE A ++
Sbjct: 206 QTNPEDKGALAKLVEAIKTNYNDRYEEIRRHWGGGILGPKSTARINKLEKAKAKELATKL 265

[Close]

BLAST of Carg08458 vs. TrEMBL
Match: tr|A0A0A0KPQ6|A0A0A0KPQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171740 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 8.2e-123
Identity = 232/240 (96.67%), Postives = 236/240 (98.33%), Query Frame = 0


Query: 8   KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK 67
           KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPK VQIQRKKRILKQRLKVPPALNQFTK
Sbjct: 18  KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKRILKQRLKVPPALNQFTK 77

Query: 68  TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL 127
           TLDKNLATNLFKMLLKYRPEDK QK+ERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL
Sbjct: 78  TLDKNLATNLFKMLLKYRPEDKTQKKERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL 137

Query: 128 IEQ--AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT 187
           IEQ  AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGA+VHQKTASVLCLTT
Sbjct: 138 IEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAVVHQKTASVLCLTT 197

Query: 188 VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 246
           VKNEDK+EFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKE+LLAKEAAQRMS
Sbjct: 198 VKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEAAQRMS 257

[Close]

BLAST of Carg08458 vs. TrEMBL
Match: tr|A0A1S3CUE8|A0A1S3CUE8_CUCME (60S ribosomal protein L7a-2 OS=Cucumis melo OX=3656 GN=LOC103504656 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 1.1e-122
Identity = 232/240 (96.67%), Postives = 236/240 (98.33%), Query Frame = 0


Query: 8   KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK 67
           KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPK VQIQRKKRILKQRLKVPPALNQFTK
Sbjct: 18  KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKRILKQRLKVPPALNQFTK 77

Query: 68  TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL 127
           TLDKNLATNLFKMLLKYRPEDK QKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL
Sbjct: 78  TLDKNLATNLFKMLLKYRPEDKTQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL 137

Query: 128 IEQ--AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT 187
           IEQ  AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGA+VH+KTASVLCLTT
Sbjct: 138 IEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAVVHKKTASVLCLTT 197

Query: 188 VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 246
           VKNEDK+EFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKE+LLAKEAAQRMS
Sbjct: 198 VKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEAAQRMS 257

[Close]

BLAST of Carg08458 vs. TrEMBL
Match: tr|A0A0A0KRP5|A0A0A0KRP5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171730 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 2.0e-121
Identity = 232/240 (96.67%), Postives = 235/240 (97.92%), Query Frame = 0


Query: 8   KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK 67
           KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPK VQIQRKKRILKQRLKVPPALNQFTK
Sbjct: 18  KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKRILKQRLKVPPALNQFTK 77

Query: 68  TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL 127
           TLDKNLATNLFKMLLKYRPEDK QKRERLLKRAQEEAEGK+ DAKKPIVVKYGLNHVTYL
Sbjct: 78  TLDKNLATNLFKMLLKYRPEDKTQKRERLLKRAQEEAEGKTLDAKKPIVVKYGLNHVTYL 137

Query: 128 IEQ--AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT 187
           IEQ  AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLG+IVH+KTASVLCLTT
Sbjct: 138 IEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKTASVLCLTT 197

Query: 188 VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 246
           VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS
Sbjct: 198 VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 257

[Close]

BLAST of Carg08458 vs. TrEMBL
Match: tr|A0A0A0LBU9|A0A0A0LBU9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G563300 PE=4 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 4.5e-121
Identity = 228/240 (95.00%), Postives = 236/240 (98.33%), Query Frame = 0


Query: 8   KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK 67
           KVVNPLFEKRPKQFGIGGA+PPKRDLTRFVKWPK VQIQRKKRILKQRLKVPPALNQFTK
Sbjct: 18  KVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKRILKQRLKVPPALNQFTK 77

Query: 68  TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL 127
           TLDKNLATNLFKMLLKYRPED++QKRERLLKRAQEEA+GK HDAKKPIVVKYGLNHVTYL
Sbjct: 78  TLDKNLATNLFKMLLKYRPEDRSQKRERLLKRAQEEADGKPHDAKKPIVVKYGLNHVTYL 137

Query: 128 IEQ--AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT 187
           IEQ  AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLG+IVH+KTASVLCLTT
Sbjct: 138 IEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKTASVLCLTT 197

Query: 188 VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 246
           VKNEDK+EFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKE+LLAKEAAQRMS
Sbjct: 198 VKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEAAQRMS 257

[Close]

BLAST of Carg08458 vs. TrEMBL
Match: tr|A0A1S3CT56|A0A1S3CT56_CUCME (60S ribosomal protein L7a-1 OS=Cucumis melo OX=3656 GN=LOC103504657 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 5.8e-121
Identity = 231/240 (96.25%), Postives = 235/240 (97.92%), Query Frame = 0


Query: 8   KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTK 67
           KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPK VQIQRKKRILKQRLKVPPALNQFTK
Sbjct: 18  KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKRILKQRLKVPPALNQFTK 77

Query: 68  TLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYL 127
           TLDKNLATNLFKMLLKYRPED+ QKRERLLKRAQEEAEGKS DAKKPIVVKYGLNHVTYL
Sbjct: 78  TLDKNLATNLFKMLLKYRPEDRTQKRERLLKRAQEEAEGKSLDAKKPIVVKYGLNHVTYL 137

Query: 128 IEQ--AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTT 187
           IEQ  AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLG+IVH+KTASVLCLTT
Sbjct: 138 IEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKTASVLCLTT 197

Query: 188 VKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 246
           VKNEDKLEFSRILEAIKANFNDKY+EYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS
Sbjct: 198 VKNEDKLEFSRILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 257

The following BLAST results are available for this feature:

BLAST of Carg08458 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958469.1	4.5e-125	99.17	60S ribosomal protein L7a-2-like [Cucurbita moschata]	[more]
XP_022995921.1	4.5e-125	99.17	60S ribosomal protein L7a-2-like [Cucurbita maxima] >XP_023534150.1 60S ribosoma...	[more]
XP_022928907.1	1.3e-124	99.17	60S ribosomal protein L7a-2 isoform X2 [Cucurbita moschata] >XP_022970186.1 60S ...	[more]
XP_022934368.1	2.9e-124	98.75	60S ribosomal protein L7a-2 [Cucurbita moschata] >XP_023527406.1 60S ribosomal p...	[more]
XP_022983551.1	6.5e-124	98.33	60S ribosomal protein L7a-2-like [Cucurbita maxima]	[more]

BLAST of Carg08458 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G47610.1	1.4e-115	86.25	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT3G62870.1	3.0e-115	85.83	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]

BLAST of Carg08458 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P35685\|RL7A1_ORYSJ	1.0e-115	89.17	60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 ...	[more]
sp\|P0DKK7\|RL7A2_ORYSJ	1.0e-115	89.17	60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 ...	[more]
sp\|P49692\|RL7A1_ARATH	2.5e-114	86.25	60S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2	[more]
sp\|Q9LZH9\|RL7A2_ARATH	5.5e-114	85.83	60S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=2 SV=1	[more]
sp\|O57592\|RL7A_TAKRU	4.7e-73	58.75	60S ribosomal protein L7a OS=Takifugu rubripes OX=31033 GN=rpl7a PE=3 SV=3	[more]

BLAST of Carg08458 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KPQ6\|A0A0A0KPQ6_CUCSA	8.2e-123	96.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171740 PE=4 SV=1	[more]
tr\|A0A1S3CUE8\|A0A1S3CUE8_CUCME	1.1e-122	96.67	60S ribosomal protein L7a-2 OS=Cucumis melo OX=3656 GN=LOC103504656 PE=4 SV=1	[more]
tr\|A0A0A0KRP5\|A0A0A0KRP5_CUCSA	2.0e-121	96.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171730 PE=4 SV=1	[more]
tr\|A0A0A0LBU9\|A0A0A0LBU9_CUCSA	4.5e-121	95.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G563300 PE=4 SV=1	[more]
tr\|A0A1S3CT56\|A0A1S3CT56_CUCME	5.8e-121	96.25	60S ribosomal protein L7a-1 OS=Cucumis melo OX=3656 GN=LOC103504657 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:1990904	ribonucleoprotein complex

Vocabulary: **Biological Process**
Term	Definition
GO:0042254	ribosome biogenesis

Vocabulary: **INTERPRO**
Term	Definition
IPR029064	L30e-like
IPR004037	Ribosomal_L7Ae_CS
IPR004038	Ribosomal_L7Ae/L30e/S12e/Gad45
IPR038524	Ribosomal_L7A/L8_sf
IPR018492	Ribosomal_L7Ae/L8/Nhp2
IPR001921	Ribosomal_L7A/L8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08458-RA	Carg08458-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001921	Ribosomal protein L7A/L8	PRINTS	PR00882	RIBOSOMALL7A	coord: 55..74 score: 74.09 coord: 35..52 score: 60.1 coord: 113..133 score: 52.81 coord: 204..224 score: 68.4 coord: 79..92 score: 62.34 coord: 172..196 score: 48.36 coord: 18..35 score: 71.21
IPR018492	Ribosomal protein L7Ae/L8/Nhp2 family	PRINTS	PR00881	L7ARS6FAMILY	coord: 150..160 score: 64.46 coord: 117..131 score: 45.45 coord: 160..174 score: 56.36
IPR038524	Ribosomal protein L7A/L8 superfamily	GENE3D	G3DSA:3.30.1330.210		coord: 39..220 e-value: 4.2E-85 score: 286.0
IPR004038	Ribosomal protein L7Ae/L30e/S12e/Gadd45	PFAM	PF01248	Ribosomal_L7Ae	coord: 104..192 e-value: 7.7E-22 score: 76.7
None	No IPR available	PANTHER	PTHR23105:SF70	60S RIBOSOMAL PROTEIN L7A-1-RELATED	coord: 7..245
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 7..245
IPR004037	Ribosomal protein L7Ae conserved site	PROSITE	PS01082	RIBOSOMAL_L7AE	coord: 153..170
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	SSF55315	L30e-like	coord: 77..216

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08458	Cla002366	Watermelon (97103) v1	carwmB0712
Carg08458	Csa5G171730	Cucumber (Chinese Long) v2	carcuB0733
Carg08458	MELO3C005401	Melon (DHL92) v3.5.1	carmeB0705
Carg08458	ClCG01G005240	Watermelon (Charleston Gray)	carwcgB0688
Carg08458	CSPI05G08120	Wild cucumber (PI 183967)	carcpiB0749
Carg08458	Cucsa.115570	Cucumber (Gy14) v1	carcgyB0795
Carg08458	CmaCh02G010190	Cucurbita maxima (Rimu)	carcmaB0999
Carg08458	CmaCh15G013900	Cucurbita maxima (Rimu)	carcmaB0993
Carg08458	CmoCh15G014550	Cucurbita moschata (Rifu)	carcmoB0965
Carg08458	CmoCh02G010340	Cucurbita moschata (Rifu)	carcmoB0971
Carg08458	Lsi09G005540	Bottle gourd (USVL1VR-Ls)	carlsiB648
Carg08458	Cp4.1LG05g06910	Cucurbita pepo (Zucchini)	carcpeB1002
Carg08458	Cp4.1LG13g00580	Cucurbita pepo (Zucchini)	carcpeB0995
Carg08458	MELO3C005401.2	Melon (DHL92) v3.6.1	carmedB0718
Carg08458	CsaV3_5G005520	Cucumber (Chinese Long) v3	carcucB0752
Carg08458	Cla97C01G005470	Watermelon (97103) v2	carwmbB0741

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg08458	Carg20788	Silver-seed gourd	carcarB584

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08458	Cucumber (Gy14) v2	carcgybB0707
Carg08458	Cucumber (Gy14) v2	carcgybB0711
Carg08458	Cucurbita maxima (Rimu)	carcmaB0994
Carg08458	Cucurbita maxima (Rimu)	carcmaB0996
Carg08458	Cucurbita moschata (Rifu)	carcmoB0966
Carg08458	Cucurbita moschata (Rifu)	carcmoB0968
Carg08458	Cucurbita pepo (Zucchini)	carcpeB0994
Carg08458	Cucurbita pepo (Zucchini)	carcpeB0998
Carg08458	Wild cucumber (PI 183967)	carcpiB0745
Carg08458	Cucumber (Chinese Long) v2	carcuB0730
Carg08458	Cucumber (Chinese Long) v3	carcucB0748
Carg08458	Melon (DHL92) v3.5.1	carmeB0709
Carg08458	Melon (DHL92) v3.6.1	carmedB0722
Carg08458	Watermelon (Charleston Gray)	carwcgB0690
Carg08458	Watermelon (97103) v1	carwmB0710
Carg08458	Watermelon (97103) v1	carwmB0708
Carg08458	Watermelon (97103) v2	carwmbB0743
Carg08458	Wax gourd	carwgoB0831
Carg08458	Wax gourd	carwgoB0834