CmoCh15G011500 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G011500
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Auxin-responsive protein
Location	Cmo_Chr15 : 8035534 .. 8036891 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGTTCCAACAGATTTCACGCAAATTCCATTTCCTTCCGTTCTTCAAGCTATGAAGCGCCAGTTCGCGAGTTTTGGAAACGTCCGCGATCTCAATTTCGAGGCAACAGAGCTGCGATTAGGATTACTGCCGAGAACAGAACAAGAACGAGAATCACAATCAGAATCCGCGGAACAGAGCAAGAGTGATTCCAGATCCGGAAGCGAGTACTCGATTTCGTCCACTAATCCTTCTTCAGATGCCGAGCATTTGCATTGCCGCGAAATACACATTATCGATCATCCTCCACCGGCAAAGTAAAGTCGATAATCGCGATTCGTTTAATTTCTGTTTCTATTTCAATCTGAATCGCTGTTTTAGGAAATTAGGGTTTATGTGTGTTGTGTTCTTGTGGTGGATGAATTATCGCAGGGCGCAAGTGGTAGGATGGCCACCGGTGAGATCTTACCTGAAGAATATGATAATTGAAGCAGAAAAGAAGATTCAGAAGGAGATTATGAACAAGGAAGTAGGGAGCAGTGGAATGTATGTGAAAGTAAGCTTAGATGGAGCTCCTTATCTCAGGAAGATTGATCTCAAGCTTTATCAGAGCTATCAACAGCTTTTGGACGTTTTGGAAGACATGTTCAACATCAAACTTGGTTAGTTTTGCCTCCATAACCATTTCATTTTTCATTTTGAGAAGTAATTCATAAACTTCCACTTATAACAGAGAGATGAACATAGTAAGGAAAATTAAAAGAAAAACTAATCCAACTCGTTCTTCTCTGGTTGATAATCGTTGATAAGAGATTTTAAGGCCGGTTTGATTACACGTTTAGGCAACATAAAAATCTATACATTCTATATGAAAATAGATTTTAAACTTAAACTAATGCATCTACACATAAATTTGTATGGTAATTAATAGGTGGAAATTCAGAGAAAGAGGGGAACAATTGGTGTGAATATGCTCTAACTTATGAAGATAAAGATGGTGATTGGATGATGGTTGGAGATGTTCCATGGAAGTGAGTCTCCCTCTCTGTAATTTTACCTCTTCTTTACTGATCTTTCTCTCTAAGAACCCTAATATATTTGTGTTCTTCCTTCATGCAGTATGTTTATTTGCTGCTGCAAGAGATTGAGAATTATGAAAGGATCAGATGCCAGAGGATTGGGTTGTTTGTAATTTAAAGAAGAAATTTGAGGAATTTATTTTGGATCAAATTTATTGTTCCCAAAACAAAATGAGATCCAAGACACAACTACTCAAGATCCAATTGTACAAAAATGAATGTCATATTCCACTTTATATTTTATATTTAATTATATCGTTTTTTATAAATTTTAGAATCCTCGGACAAATTAGATCAGTCC

mRNA sequence

TCGTTCCAACAGATTTCACGCAAATTCCATTTCCTTCCGTTCTTCAAGCTATGAAGCGCCAGTTCGCGAGTTTTGGAAACGTCCGCGATCTCAATTTCGAGGCAACAGAGCTGCGATTAGGATTACTGCCGAGAACAGAACAAGAACGAGAATCACAATCAGAATCCGCGGAACAGAGCAAGAGTGATTCCAGATCCGGAAGCGAGTACTCGATTTCGTCCACTAATCCTTCTTCAGATGCCGAGCATTTGCATTGCCGCGAAATACACATTATCGATCATCCTCCACCGGCAAAGGCGCAAGTGGTAGGATGGCCACCGGTGAGATCTTACCTGAAGAATATGATAATTGAAGCAGAAAAGAAGATTCAGAAGGAGATTATGAACAAGGAAGTAGGGAGCAGTGGAATGTATGTGAAAGTAAGCTTAGATGGAGCTCCTTATCTCAGGAAGATTGATCTCAAGCTTTATCAGAGCTATCAACAGCTTTTGGACGTTTTGGAAGACATGTTCAACATCAAACTTGGCAACATAAAAATCTATACATTCTATATGAAAATAGATTTTAAACTTAAACTAATGCATCTACACATAAATTTGTATGGTGGAAATTCAGAGAAAGAGGGGAACAATTGGTGTGAATATGCTCTAACTTATGAAGATAAAGATGGTGATTGGATGATGGTTGGAGATGTTCCATGGAATATGTTTATTTGCTGCTGCAAGAGATTGAGAATTATGAAAGGATCAGATGCCAGAGGATTGGGTTGTTTGTAATTTAAAGAAGAAATTTGAGGAATTTATTTTGGATCAAATTTATTGTTCCCAAAACAAAATGAGATCCAAGACACAACTACTCAAGATCCAATTGTACAAAAATGAATGTCATATTCCACTTTATATTTTATATTTAATTATATCGTTTTTTATAAATTTTAGAATCCTCGGACAAATTAGATCAGTCC

Coding sequence (CDS)

ATGAAGCGCCAGTTCGCGAGTTTTGGAAACGTCCGCGATCTCAATTTCGAGGCAACAGAGCTGCGATTAGGATTACTGCCGAGAACAGAACAAGAACGAGAATCACAATCAGAATCCGCGGAACAGAGCAAGAGTGATTCCAGATCCGGAAGCGAGTACTCGATTTCGTCCACTAATCCTTCTTCAGATGCCGAGCATTTGCATTGCCGCGAAATACACATTATCGATCATCCTCCACCGGCAAAGGCGCAAGTGGTAGGATGGCCACCGGTGAGATCTTACCTGAAGAATATGATAATTGAAGCAGAAAAGAAGATTCAGAAGGAGATTATGAACAAGGAAGTAGGGAGCAGTGGAATGTATGTGAAAGTAAGCTTAGATGGAGCTCCTTATCTCAGGAAGATTGATCTCAAGCTTTATCAGAGCTATCAACAGCTTTTGGACGTTTTGGAAGACATGTTCAACATCAAACTTGGCAACATAAAAATCTATACATTCTATATGAAAATAGATTTTAAACTTAAACTAATGCATCTACACATAAATTTGTATGGTGGAAATTCAGAGAAAGAGGGGAACAATTGGTGTGAATATGCTCTAACTTATGAAGATAAAGATGGTGATTGGATGATGGTTGGAGATGTTCCATGGAATATGTTTATTTGCTGCTGCAAGAGATTGAGAATTATGAAAGGATCAGATGCCAGAGGATTGGGTTGTTTGTAA

Homology

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BLAST of CmoCh15G011500 vs. Swiss-Prot
Match: AX22D_VIGRR (Auxin-induced protein 22D OS=Vigna radiata var. radiata GN=AUX22D PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.3e-45
Identity = 109/229 (47.60%), Postives = 143/229 (62.45%), Query Frame = 1


Query: 12  RDLNFEATELRLGLLPRTEQERESQSESAEQSKSDSRSGSEYSISSTNPSSDAEHLHCRE 71
           ++LN +ATELRLGL    E E+ + + S ++S  ++    E SIS+    SD      +E
Sbjct: 10  KELNLKATELRLGLPGSDEPEKRATARSNKRSSPEA--SDEESISN---GSDVT----KE 69

Query: 72  IHIIDHPPPAKAQVVGWPPVRSYLKNMIIEAEKKIQKEIMNKEVGSSGMYVKVSLDGAPY 131
            +++   PPAKAQVVGWPP+RSY KN + + +++        E   +GMYVKVS+ GAPY
Sbjct: 70  DNVV---PPAKAQVVGWPPIRSYRKNNVQQKKEE--------ESEGNGMYVKVSMAGAPY 129

Query: 132 LRKIDLKLYQSYQQLLDVLEDMFNIKLGNIKIYTFYMKIDFKLKLMHLHINLYGGNSEKE 191
           LRKIDLK+Y+SY +LL  LE+MF                            ++G  SE+E
Sbjct: 130 LRKIDLKVYKSYPELLKALENMFKC--------------------------IFGEYSERE 189

Query: 192 GNNWCEYALTYEDKDGDWMMVGDVPWNMFICCCKRLRIMKGSDARGLGC 241
           G N  EYA TYEDKDGDWM+VGDVPWNMF+  CKRLRIMKGS+A+GLGC
Sbjct: 190 GYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIMKGSEAKGLGC 192

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BLAST of CmoCh15G011500 vs. Swiss-Prot
Match: AX22B_VIGRR (Auxin-induced protein 22B OS=Vigna radiata var. radiata GN=AUX22B PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.8e-44
Identity = 105/229 (45.85%), Postives = 136/229 (59.39%), Query Frame = 1


Query: 13  DLNFEATELRLGLLPRTEQERESQSESAEQSKSDSRSGSEYSISSTNPSSDAEHLHCREI 72
           DLN +ATELRLGL P TE++ ++   +    +++ R   E S  S + S  A H H + +
Sbjct: 10  DLNLKATELRLGL-PGTEEKEDNNLRTHAVLRNNKRQVRETSQDSVSISK-ASH-HQQHV 69

Query: 73  HIIDHPPPAKAQVVGWPPVRSYLKNMIIEAEKKIQKEIMNKEVGSSGMYVKVSLDGAPYL 132
             +  PPP KA++VGWPP+RSY KN + E E               G++VKVS+DGAPYL
Sbjct: 70  ETVSAPPP-KAKIVGWPPIRSYRKNSVQEGE-------------GDGIFVKVSMDGAPYL 129

Query: 133 RKIDLKLYQSYQQLLDVLEDMFNIKLGNIKIYTFYMKIDFKLKLMHLHINLYGGNSEKEG 192
           RK+DLK+Y  Y +LL  LE MF + +G                            SE+EG
Sbjct: 130 RKVDLKVYGGYPELLKALETMFKLAIGEY--------------------------SEREG 189

Query: 193 NNWCEYALTYEDKDGDWMMVGDVPWNMFICCCKRLRIMKGSDARGLGCL 242
               EYA TYEDKDGDWM+VGDVPW+MF+  CKRLRIMKGS+ARGLGC+
Sbjct: 190 YKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARGLGCV 195

[Close]

BLAST of CmoCh15G011500 vs. Swiss-Prot
Match: AX22E_VIGRR (Auxin-induced protein 22E OS=Vigna radiata var. radiata GN=AUX22E PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.9e-43
Identity = 105/232 (45.26%), Postives = 139/232 (59.91%), Query Frame = 1


Query: 13  DLNFEATELRLGLLPRTEQERESQSESAEQSKSDSRSGS---EYSISSTNPSSDAEHLHC 72
           +LN  ATELRLGL P +++ +E +  S    +S ++  S   E S   +N +SD+     
Sbjct: 7   ELNLRATELRLGL-PGSDEPQEKRPCSGSVVRSSNKRSSPELEESRCKSNINSDSSDSTT 66

Query: 73  REIHIIDHPPPAKAQVVGWPPVRSYLKNMIIEAEKKIQKEIMNKEVGSSGMYVKVSLDGA 132
              H  D   PAK QVVGWPP+RS+ KN +   +KK+++         +GMY+KVS+ GA
Sbjct: 67  TSDHNEDSVQPAKVQVVGWPPIRSFRKNSL--QQKKVEQG------DGTGMYLKVSMAGA 126

Query: 133 PYLRKIDLKLYQSYQQLLDVLEDMFNIKLGNIKIYTFYMKIDFKLKLMHLHINLYGGNSE 192
           PYLRKIDLK+Y+SY +LL  L+++F    G                            SE
Sbjct: 127 PYLRKIDLKVYKSYPELLKALQNLFKCTFGEY--------------------------SE 186

Query: 193 KEGNNWCEYALTYEDKDGDWMMVGDVPWNMFICCCKRLRIMKGSDARGLGCL 242
           +EG N  EYA TYEDKDGDWM+VGDVPWNMF+  CKRLRI+KGS+A+GLGCL
Sbjct: 187 REGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIIKGSEAKGLGCL 203

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BLAST of CmoCh15G011500 vs. Swiss-Prot
Match: IAA4_PEA (Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA4/5 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 9.2e-42
Identity = 103/231 (44.59%), Postives = 138/231 (59.74%), Query Frame = 1


Query: 14  LNFEATELRLGLLPRTEQERESQSESAEQSKSDSR----SGSEYSISSTNPSSDAEHLHC 73
           + F+ATELRLGL   TE+E +     +   K++++      SE S+S +  ++D EH+  
Sbjct: 1   MEFKATELRLGLPGITEEEEKKIIHGSSVVKNNNKRQLPQTSEESVSISKVTND-EHI-- 60

Query: 74  REIHIIDHPPPAKAQVVGWPPVRSYLKNMIIEAEKKIQKEIMNKEVGSSGMYVKVSLDGA 133
             +      PPAKA++VGWPP+RSY KN + EA+           VG  G++VKVS+DGA
Sbjct: 61  --VESSSAAPPAKAKIVGWPPIRSYRKNSLHEAD-----------VG--GIFVKVSMDGA 120

Query: 134 PYLRKIDLKLYQSYQQLLDVLEDMFNIKLGNIKIYTFYMKIDFKLKLMHLHINLYGGNSE 193
           PYLRKIDL++Y  Y +LL  LE MF + +G                            SE
Sbjct: 121 PYLRKIDLRVYGGYSELLKALETMFKLTIGEY--------------------------SE 180

Query: 194 KEGNNWCEYALTYEDKDGDWMMVGDVPWNMFICCCKRLRIMKGSDARGLGC 241
           +EG    EYA TYEDKDGDWM+VGDVPW+MF+  CKRLRIMKG++A+GLGC
Sbjct: 181 REGYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEAKGLGC 187

[Close]

BLAST of CmoCh15G011500 vs. Swiss-Prot
Match: IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.8e-37
Identity = 96/230 (41.74%), Postives = 126/230 (54.78%), Query Frame = 1


Query: 14  LNFEATELRLGLLPRTEQERESQSESAEQSKSDSR---SGSEYSISSTNPSSDAEHLHCR 73
           +N + TELRLGL P T+   E++   +  + ++ R   + +E  I S++  ++       
Sbjct: 5   VNLKETELRLGL-PGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETS----- 64

Query: 74  EIHIIDHPPPAKAQVVGWPPVRSYLKNMIIEAEKKIQKEIMNKEVGSSGMYVKVSLDGAP 133
                   PP KAQ+VGWPPVRSY KN        IQ +    E    G+YVKVS+DGAP
Sbjct: 65  --------PPRKAQIVGWPPVRSYRKN-------NIQSKKNESEHEGQGIYVKVSMDGAP 124

Query: 134 YLRKIDLKLYQSYQQLLDVLEDMFNIKLGNIKIYTFYMKIDFKLKLMHLHINLYGGNSEK 193
           YLRKIDL  Y+ Y +LL  LE MF   +G                             E+
Sbjct: 125 YLRKIDLSCYKGYSELLKALEVMFKFSVGEY--------------------------FER 184

Query: 194 EGNNWCEYALTYEDKDGDWMMVGDVPWNMFICCCKRLRIMKGSDARGLGC 241
           +G    ++  TYEDKDGDWM++GDVPW MFIC CKRLRIMKGS+A+GLGC
Sbjct: 185 DGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGLGC 187

[Close]

BLAST of CmoCh15G011500 vs. TrEMBL
Match: A0A0A0KKT1_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=Csa_5G166440 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.0e-63
Identity = 154/256 (60.16%), Postives = 171/256 (66.80%), Query Frame = 1


Query: 1   MKRQ-FASFGNVRDLNFEATELRLGLLP---RTEQ----ERESQSE-SAEQSKSDSRSG- 60
           MKRQ  +SF N+  LNFEATELRLGL     RTEQ    ER S S+ SA+QSKS++RSG 
Sbjct: 1   MKRQRLSSFQNLHHLNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGG 60

Query: 61  ---SEYSISSTNPSSDAEHLHCREIHIIDHPPPAKAQVVGWPPVRSYLKNMIIEAE-KKI 120
              S   ++STNPSSD    HC E          K QVVGWPPVRSY KN+IIE E KK 
Sbjct: 61  RTDSNSILTSTNPSSDNHADHCHE--------HTKTQVVGWPPVRSYRKNVIIETEEKKK 120

Query: 121 QKEIMNKEVG-SSGMYVKVSLDGAPYLRKIDLKLYQSYQQLLDVLEDMFNIKLGNIKIYT 180
           +KEI+N E+G  SGMYVKVSLDGAPYLRKIDLKLYQ YQQLLD LEDMFN K+G      
Sbjct: 121 KKEIVNMELGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIGR----- 180

Query: 181 FYMKIDFKLKLMHLHINLYGGNSEKEGNNWCEYALTYEDKDGDWMMVGDVPWNMFICCCK 240
                                NSE+E     +Y LTYEDKDGDWMMVGDVPWNMF CCCK
Sbjct: 181 ---------------------NSEREDYYGRDYVLTYEDKDGDWMMVGDVPWNMFTCCCK 222

Query: 241 RLRIMKGSDARGLGCL 242
           R+R+MKGSDARGL CL
Sbjct: 241 RMRMMKGSDARGLSCL 222

[Close]

BLAST of CmoCh15G011500 vs. TrEMBL
Match: E5GCU3_CUCME (Auxin-responsive protein OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.1e-60
Identity = 151/258 (58.53%), Postives = 168/258 (65.12%), Query Frame = 1


Query: 1   MKRQFASFGNVRDLNFEATELRLGLLP---RTEQ---ERESQSE-SAEQSKSDSRSGSEY 60
           MKRQ +SF N+ DLNFEATELRLGL     RTEQ   E  S S+ SA+QSKS+SRSG   
Sbjct: 49  MKRQLSSFQNLHDLNFEATELRLGLPQTSCRTEQQPAEGNSHSQMSAKQSKSESRSGGRT 108

Query: 61  ---SIS-STNPSSDAEHLHCREIHIIDHPPPAKAQVVGWPPVRSYLKNMIIEAEKKIQK- 120
              SIS STN SSD    HC E          K QVVGWPPVRSY KN+IIE EKK +K 
Sbjct: 109 DSNSISTSTNSSSDDHADHCHE--------HTKTQVVGWPPVRSYRKNVIIETEKKKKKK 168

Query: 121 -----EIMNKEVG-SSGMYVKVSLDGAPYLRKIDLKLYQSYQQLLDVLEDMFNIKLGNIK 180
                EI+N E+G  SGMYVKVSLDGAPYLRKIDLKLYQ YQQLLD LE+MFN K+G   
Sbjct: 169 KKKKKEIVNMELGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEEMFNFKIGR-- 228

Query: 181 IYTFYMKIDFKLKLMHLHINLYGGNSEKEGNNWCEYALTYEDKDGDWMMVGDVPWNMFIC 240
                                   NSE+EG +  +Y  TYEDKDGDWMMVGDVPWNMF  
Sbjct: 229 ------------------------NSEREGYDGRDYVPTYEDKDGDWMMVGDVPWNMFTS 272

[Close]

BLAST of CmoCh15G011500 vs. TrEMBL
Match: B9GS71_POPTR (Auxin-responsive protein OS=Populus trichocarpa GN=POPTR_0002s04590g PE=3 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 7.3e-46
Identity = 119/231 (51.52%), Postives = 141/231 (61.04%), Query Frame = 1


Query: 12  RDLNFEATELRLGLLPRTEQERESQSESAEQSKSDSRSGSEYSIS--STNPSSDAEHLHC 71
           R LN +ATELRLGL    E E+ S + S   +K  S   SE S S  S++ SS+ E+   
Sbjct: 9   RHLNLKATELRLGLPGSDEPEKPSTTPSVRSNKRASPEISEESGSKGSSSLSSNVENSEG 68

Query: 72  REIHIIDHPPPAKAQVVGWPPVRSYLKNMIIEAEKKIQKEIMNKEVGSSGMYVKVSLDGA 131
                 D  PPAKAQVVGWPP+RSY KN +    KK      N  V  +GMYVKVS+DGA
Sbjct: 69  ------DDAPPAKAQVVGWPPIRSYRKNCL--QPKK------NDRVDGAGMYVKVSVDGA 128

Query: 132 PYLRKIDLKLYQSYQQLLDVLEDMFNIKLGNIKIYTFYMKIDFKLKLMHLHINLYGGNSE 191
           PYLRKIDLK+Y+SY +LL  LEDMF + +G                            SE
Sbjct: 129 PYLRKIDLKVYRSYPELLKALEDMFKLTIGEY--------------------------SE 188

Query: 192 KEGNNWCEYALTYEDKDGDWMMVGDVPWNMFICCCKRLRIMKGSDARGLGC 241
           KEG N  ++A TYEDKDGDWM+VGDVPW+MFI  CKRLRIMKGS+ARGLGC
Sbjct: 189 KEGYNGSDFAPTYEDKDGDWMLVGDVPWDMFISTCKRLRIMKGSEARGLGC 199

[Close]

BLAST of CmoCh15G011500 vs. TrEMBL
Match: B9H8H0_POPTR (Auxin-responsive protein OS=Populus trichocarpa GN=POPTR_0005s23970g PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.6e-45
Identity = 118/230 (51.30%), Postives = 141/230 (61.30%), Query Frame = 1


Query: 13  DLNFEATELRLGLLPRTEQERESQSESAEQSKSDSRSGSEYSIS--STNPSSDAEHLHCR 72
           DLN +ATELRLGL    E E+ S + S   +K  S   SE S S  S++ SS+ E+    
Sbjct: 6   DLNLKATELRLGLPGSDEPEKPSTTPSVRSNKRASPEISEESRSKGSSSVSSNVENGER- 65

Query: 73  EIHIIDHPPPAKAQVVGWPPVRSYLKNMIIEAEKKIQKEIMNKEVGSSGMYVKVSLDGAP 132
                D  PPAKAQVVGWPP+RSY KN +    KK      N +V  +GMYVKVS+DGAP
Sbjct: 66  -----DSAPPAKAQVVGWPPIRSYRKNCL--QPKK------NDQVDGAGMYVKVSVDGAP 125

Query: 133 YLRKIDLKLYQSYQQLLDVLEDMFNIKLGNIKIYTFYMKIDFKLKLMHLHINLYGGNSEK 192
           YLRKIDLK+Y+SY +LL  LE+MF + +G                            SE 
Sbjct: 126 YLRKIDLKVYKSYPELLKALENMFKLTIGEY--------------------------SEN 185

Query: 193 EGNNWCEYALTYEDKDGDWMMVGDVPWNMFICCCKRLRIMKGSDARGLGC 241
           EG N  E+A TYEDKDGDWM+VGDVPW+MFI  CKRLRIMKGS+ARGLGC
Sbjct: 186 EGYNGSEFAPTYEDKDGDWMLVGDVPWDMFISSCKRLRIMKGSEARGLGC 195

[Close]

BLAST of CmoCh15G011500 vs. TrEMBL
Match: L0AUF6_POPTO (Auxin-responsive protein OS=Populus tomentosa PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.1e-45
Identity = 116/238 (48.74%), Postives = 145/238 (60.92%), Query Frame = 1


Query: 12  RDLNFEATELRLGLLPRTEQERESQSESAEQSKSDSRS---------GSEYSISSTNPSS 71
           RDLN +ATELRLGL     ++ E Q+ ++  +KS+ RS         GS    SST  SS
Sbjct: 5   RDLNLDATELRLGLPGTATKQSEKQTPNSNLAKSNKRSLPDMNEEPAGSSRENSST-VSS 64

Query: 72  DAEHLHCREIHIIDHPPPAKAQVVGWPPVRSYLKNMIIEAEKKIQKEIMNKEVGSSGMYV 131
           + E  H +E      PPP KAQVVGWPP+RSY KN +    +K++ E       ++G+YV
Sbjct: 65  NEEKSHDQETA----PPPIKAQVVGWPPIRSYRKNCL--QARKLEAE-------AAGLYV 124

Query: 132 KVSLDGAPYLRKIDLKLYQSYQQLLDVLEDMFNIKLGNIKIYTFYMKIDFKLKLMHLHIN 191
           KVS+DGAPYLRKIDLK+Y+ Y +LL+V+E+MF  K+G                       
Sbjct: 125 KVSMDGAPYLRKIDLKVYKGYPELLEVVEEMFKFKVGEY--------------------- 184

Query: 192 LYGGNSEKEGNNWCEYALTYEDKDGDWMMVGDVPWNMFICCCKRLRIMKGSDARGLGC 241
                SE+EG N  EY  TYEDKDGDWM+VGDVPW MFI  CKRLRIMK S+ARGLGC
Sbjct: 185 -----SEREGYNGSEYVPTYEDKDGDWMLVGDVPWEMFINSCKRLRIMKESEARGLGC 202

[Close]

BLAST of CmoCh15G011500 vs. TAIR10
Match: AT1G04240.1 (AT1G04240.1 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 157.5 bits (397), Expect = 1.0e-38
Identity = 96/230 (41.74%), Postives = 126/230 (54.78%), Query Frame = 1


Query: 14  LNFEATELRLGLLPRTEQERESQSESAEQSKSDSR---SGSEYSISSTNPSSDAEHLHCR 73
           +N + TELRLGL P T+   E++   +  + ++ R   + +E  I S++  ++       
Sbjct: 5   VNLKETELRLGL-PGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETS----- 64

Query: 74  EIHIIDHPPPAKAQVVGWPPVRSYLKNMIIEAEKKIQKEIMNKEVGSSGMYVKVSLDGAP 133
                   PP KAQ+VGWPPVRSY KN        IQ +    E    G+YVKVS+DGAP
Sbjct: 65  --------PPRKAQIVGWPPVRSYRKN-------NIQSKKNESEHEGQGIYVKVSMDGAP 124

Query: 134 YLRKIDLKLYQSYQQLLDVLEDMFNIKLGNIKIYTFYMKIDFKLKLMHLHINLYGGNSEK 193
           YLRKIDL  Y+ Y +LL  LE MF   +G                             E+
Sbjct: 125 YLRKIDLSCYKGYSELLKALEVMFKFSVGEY--------------------------FER 184

Query: 194 EGNNWCEYALTYEDKDGDWMMVGDVPWNMFICCCKRLRIMKGSDARGLGC 241
           +G    ++  TYEDKDGDWM++GDVPW MFIC CKRLRIMKGS+A+GLGC
Sbjct: 185 DGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGLGC 187

[Close]

BLAST of CmoCh15G011500 vs. TAIR10
Match: AT5G43700.1 (AT5G43700.1 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 155.2 bits (391), Expect = 5.0e-38
Identity = 99/230 (43.04%), Postives = 122/230 (53.04%), Query Frame = 1


Query: 14  LNFEATELRLGLLPRTEQERESQSESAEQSKSDSR---SGSEYSISSTNPSSDAEHLHCR 73
           +N +ATELRLGL P TE       E+    KS+ R     +E  I ST  +  A      
Sbjct: 11  VNLKATELRLGL-PGTE-------ETVSCGKSNKRVLPEATEKEIESTGKTETAS----- 70

Query: 74  EIHIIDHPPPAKAQVVGWPPVRSYLKNMIIEAEKKIQKEIMNKEVGSSGMYVKVSLDGAP 133
                    P KAQ+VGWPPVRSY KN +    KK + E         G YVKVS+DGAP
Sbjct: 71  ---------PPKAQIVGWPPVRSYRKNNV--QTKKSESE-------GQGNYVKVSMDGAP 130

Query: 134 YLRKIDLKLYQSYQQLLDVLEDMFNIKLGNIKIYTFYMKIDFKLKLMHLHINLYGGNSEK 193
           YLRKIDL +Y+ Y +L+  LE+MF   +G                             E+
Sbjct: 131 YLRKIDLTMYKQYPELMKSLENMFKFSVGEY--------------------------FER 183

Query: 194 EGNNWCEYALTYEDKDGDWMMVGDVPWNMFICCCKRLRIMKGSDARGLGC 241
           EG    ++  TYEDKDGDWM+VGDVPW MF+  CKRLRIMKGS+ +GLGC
Sbjct: 191 EGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLGC 183

[Close]

BLAST of CmoCh15G011500 vs. TAIR10
Match: AT3G23050.1 (AT3G23050.1 indole-3-acetic acid 7)

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-36
Identity = 110/242 (45.45%), Postives = 143/242 (59.09%), Query Frame = 1


Query: 14  LNFEATELRLGLLPRTEQERESQSESAEQSKSDSRSGSEYSI---SSTNPSSDAEHLHC- 73
           +N +ATEL LGL P   +  ES ++SA  SK       +  +   S+   S D +++   
Sbjct: 6   MNLKATELCLGL-PGGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLKNVSAV 65

Query: 74  -REIHIIDHP--PPAKAQVVGWPPVRSYLKNMIIE------AEKKIQKEIMNKEVGSSGM 133
            +E   +  P  PPAKAQVVGWPPVR+Y KNM+ +      AE+   ++  N   G++G 
Sbjct: 66  PKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGA 125

Query: 134 -YVKVSLDGAPYLRKIDLKLYQSYQQLLDVLEDMFN-IKLGNIKIYTFYMKIDF--KLKL 193
             VKVS+DGAPYLRK+DLK+Y+SYQ L D L  MF+   +GN   Y     IDF  + KL
Sbjct: 126 GLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGN---YGAQGMIDFMNESKL 185

Query: 194 MHLHINLYGGNSEKEGNNWCEYALTYEDKDGDWMMVGDVPWNMFICCCKRLRIMKGSDAR 239
           M+L              N  EY  +YEDKDGDWM+VGDVPW MF+  CKRLRIMKGS+A 
Sbjct: 186 MNLL-------------NSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAV 230

[Close]

BLAST of CmoCh15G011500 vs. TAIR10
Match: AT3G23030.1 (AT3G23030.1 indole-3-acetic acid inducible 2)

HSP 1 Score: 144.8 bits (364), Expect = 6.8e-35
Identity = 93/232 (40.09%), Postives = 117/232 (50.43%), Query Frame = 1


Query: 7   SFGNVRDLNFEATELRLGLLPRTEQERESQSESAEQSKSDSRSGSEYSISSTNPSSDAEH 66
           ++  V +LN + TEL LGL  RTE+ +E      EQ  S  +S ++     T    ++  
Sbjct: 2   AYEKVNELNLKDTELCLGLPGRTEKIKE------EQEVSCVKSNNKRLFEETRDEEEST- 61

Query: 67  LHCREIHIIDHPPPAKAQVVGWPPVRSYLKNMIIEAEKKIQKEIMNKEVGSSGMYVKVSL 126
                       PP K Q+VGWPPVRS  KN                   +S  YVKVS+
Sbjct: 62  ------------PPTKTQIVGWPPVRSSRKN------------------NNSVSYVKVSM 121

Query: 127 DGAPYLRKIDLKLYQSYQQLLDVLEDMFNIKLGNIKIYTFYMKIDFKLKLMHLHINLYGG 186
           DGAPYLRKIDLK Y++Y +LL  LE+MF + +G                           
Sbjct: 122 DGAPYLRKIDLKTYKNYPELLKALENMFKVMIGEY------------------------- 170

Query: 187 NSEKEGNNWCEYALTYEDKDGDWMMVGDVPWNMFICCCKRLRIMKGSDARGL 239
             E+EG     +  TYEDKDGDWM+VGDVPW+MF   CKRLRIMKGSDA  L
Sbjct: 182 -CEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPAL 170

[Close]

BLAST of CmoCh15G011500 vs. TAIR10
Match: AT1G04250.1 (AT1G04250.1 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 144.8 bits (364), Expect = 6.8e-35
Identity = 81/164 (49.39%), Postives = 105/164 (64.02%), Query Frame = 1


Query: 79  PPAKAQVVGWPPVRSYLKNMIIEAEKKIQKEIMNKEVGSSGMYVKVSLDGAPYLRKIDLK 138
           PPAKAQVVGWPPVRSY KN+++  +K       +     +  +VKVS+DGAPYLRKIDL+
Sbjct: 77  PPAKAQVVGWPPVRSYRKNVMVSCQK-------SSGGPEAAAFVKVSMDGAPYLRKIDLR 136

Query: 139 LYQSYQQLLDVLEDMFNI----KLGNIKIYTFYMKIDFKLKLMHLHINLYGGNSEKEGNN 198
           +Y+SY +L + L +MF+     K G  +    +M    + KLM L             N+
Sbjct: 137 MYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMN---ERKLMDLV------------NS 196

Query: 199 WCEYALTYEDKDGDWMMVGDVPWNMFICCCKRLRIMKGSDARGL 239
           W +Y  +YEDKDGDWM+VGDVPW MF+  CKRLR+MKGSDA GL
Sbjct: 197 W-DYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGL 217

[Close]

BLAST of CmoCh15G011500 vs. NCBI nr
Match: gi|700195123|gb|KGN50300.1| (hypothetical protein Csa_5G166440 [Cucumis sativus])

HSP 1 Score: 251.5 bits (641), Expect = 1.5e-63
Identity = 154/256 (60.16%), Postives = 171/256 (66.80%), Query Frame = 1


Query: 1   MKRQ-FASFGNVRDLNFEATELRLGLLP---RTEQ----ERESQSE-SAEQSKSDSRSG- 60
           MKRQ  +SF N+  LNFEATELRLGL     RTEQ    ER S S+ SA+QSKS++RSG 
Sbjct: 1   MKRQRLSSFQNLHHLNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGG 60

Query: 61  ---SEYSISSTNPSSDAEHLHCREIHIIDHPPPAKAQVVGWPPVRSYLKNMIIEAE-KKI 120
              S   ++STNPSSD    HC E          K QVVGWPPVRSY KN+IIE E KK 
Sbjct: 61  RTDSNSILTSTNPSSDNHADHCHE--------HTKTQVVGWPPVRSYRKNVIIETEEKKK 120

Query: 121 QKEIMNKEVG-SSGMYVKVSLDGAPYLRKIDLKLYQSYQQLLDVLEDMFNIKLGNIKIYT 180
           +KEI+N E+G  SGMYVKVSLDGAPYLRKIDLKLYQ YQQLLD LEDMFN K+G      
Sbjct: 121 KKEIVNMELGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIGR----- 180

Query: 181 FYMKIDFKLKLMHLHINLYGGNSEKEGNNWCEYALTYEDKDGDWMMVGDVPWNMFICCCK 240
                                NSE+E     +Y LTYEDKDGDWMMVGDVPWNMF CCCK
Sbjct: 181 ---------------------NSEREDYYGRDYVLTYEDKDGDWMMVGDVPWNMFTCCCK 222

Query: 241 RLRIMKGSDARGLGCL 242
           R+R+MKGSDARGL CL
Sbjct: 241 RMRMMKGSDARGLSCL 222

[Close]

BLAST of CmoCh15G011500 vs. NCBI nr
Match: gi|659073289|ref|XP_008436982.1| (PREDICTED: auxin-induced protein 22D-like [Cucumis melo])

HSP 1 Score: 241.5 bits (615), Expect = 1.5e-60
Identity = 151/258 (58.53%), Postives = 168/258 (65.12%), Query Frame = 1


Query: 1   MKRQFASFGNVRDLNFEATELRLGLLP---RTEQ---ERESQSE-SAEQSKSDSRSGSEY 60
           MKRQ +SF N+ DLNFEATELRLGL     RTEQ   E  S S+ SA+QSKS+SRSG   
Sbjct: 49  MKRQLSSFQNLHDLNFEATELRLGLPQTSCRTEQQPAEGNSHSQMSAKQSKSESRSGGRT 108

Query: 61  ---SIS-STNPSSDAEHLHCREIHIIDHPPPAKAQVVGWPPVRSYLKNMIIEAEKKIQK- 120
              SIS STN SSD    HC E          K QVVGWPPVRSY KN+IIE EKK +K 
Sbjct: 109 DSNSISTSTNSSSDDHADHCHE--------HTKTQVVGWPPVRSYRKNVIIETEKKKKKK 168

Query: 121 -----EIMNKEVG-SSGMYVKVSLDGAPYLRKIDLKLYQSYQQLLDVLEDMFNIKLGNIK 180
                EI+N E+G  SGMYVKVSLDGAPYLRKIDLKLYQ YQQLLD LE+MFN K+G   
Sbjct: 169 KKKKKEIVNMELGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEEMFNFKIGR-- 228

Query: 181 IYTFYMKIDFKLKLMHLHINLYGGNSEKEGNNWCEYALTYEDKDGDWMMVGDVPWNMFIC 240
                                   NSE+EG +  +Y  TYEDKDGDWMMVGDVPWNMF  
Sbjct: 229 ------------------------NSEREGYDGRDYVPTYEDKDGDWMMVGDVPWNMFTS 272

[Close]

BLAST of CmoCh15G011500 vs. NCBI nr
Match: gi|659100794|ref|XP_008451269.1| (PREDICTED: auxin-induced protein 22D-like [Cucumis melo])

HSP 1 Score: 194.5 bits (493), Expect = 2.1e-46
Identity = 119/230 (51.74%), Postives = 140/230 (60.87%), Query Frame = 1


Query: 13  DLNFEATELRLGLLPRTEQERESQSESAEQSKSDSRSGSEYSISSTNPSSDAEHLHCREI 72
           DLNF+ATELRLGL    E +R ++S+S ++  S+    S  SIS+     D         
Sbjct: 12  DLNFQATELRLGLPGSDEPDRRTESKSNKRPFSEIDKESNSSISNNGNCLDQT------- 71

Query: 73  HIIDHPPPAKAQVVGWPPVRSYLKNMIIEAEKKIQKEIMNKEVGSSGMYVKVSLDGAPYL 132
                PPP+KAQVVGWPPVRSY KN +  A KK + E       SSG YVKVS+DGAPYL
Sbjct: 72  ---SQPPPSKAQVVGWPPVRSYRKNYL--AGKKSETE------SSSGGYVKVSMDGAPYL 131

Query: 133 RKIDLKLYQSYQQLLDVLEDMFNIKLGNIKIYTFYMKIDFKLKLMHLHINLYGGNSEKEG 192
           RKIDL +Y+SY +L+  LE+MF   LG                          G SEKEG
Sbjct: 132 RKIDLTIYKSYTELVKALENMFKFNLG--------------------------GYSEKEG 191

Query: 193 -NNWCEYALTYEDKDGDWMMVGDVPWNMFICCCKRLRIMKGSDARGLGCL 242
            NN  +YA TYEDKDGDWM+VGDVPW MFI  CKRLRIMKGS+ARGLGCL
Sbjct: 192 FNNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLRIMKGSEARGLGCL 197

[Close]

BLAST of CmoCh15G011500 vs. NCBI nr
Match: gi|743839865|ref|XP_011026050.1| (PREDICTED: auxin-induced protein 22D-like [Populus euphratica])

HSP 1 Score: 193.0 bits (489), Expect = 6.2e-46
Identity = 117/229 (51.09%), Postives = 138/229 (60.26%), Query Frame = 1


Query: 12  RDLNFEATELRLGLLPRTEQERESQSESAEQSKSDSRSGSEYSISSTNPSSDAEHLHCRE 71
           R LN +ATELRLGL    E E+ S + S   +K  S   SE S S  + S  +   +C  
Sbjct: 9   RHLNLKATELRLGLPGSDEPEKPSTTPSFRSNKRASPEISEESRSKGSSSLSSNVENCEG 68

Query: 72  IHIIDHPPPAKAQVVGWPPVRSYLKNMIIEAEKKIQKEIMNKEVGSSGMYVKVSLDGAPY 131
               D  PPAKAQVVGWPP+RSY KN +    KK      N  V  +GMYVKVS+DGAPY
Sbjct: 69  ----DGAPPAKAQVVGWPPIRSYRKNCL--QPKK------NDRVDGAGMYVKVSVDGAPY 128

Query: 132 LRKIDLKLYQSYQQLLDVLEDMFNIKLGNIKIYTFYMKIDFKLKLMHLHINLYGGNSEKE 191
           LRKIDLK+Y+SY +LL  LEDMF + +G                            SEKE
Sbjct: 129 LRKIDLKVYKSYPELLKALEDMFKLTIGEY--------------------------SEKE 188

Query: 192 GNNWCEYALTYEDKDGDWMMVGDVPWNMFICCCKRLRIMKGSDARGLGC 241
           G N  ++A TYEDKDGDWM+VGDVPW+MFI  CKRLRIMKGS+ARGLGC
Sbjct: 189 GYNESDFAPTYEDKDGDWMLVGDVPWDMFISTCKRLRIMKGSEARGLGC 199

[Close]

BLAST of CmoCh15G011500 vs. NCBI nr
Match: gi|566156230|ref|XP_002300804.2| (auxin-induced protein 22B [Populus trichocarpa])

HSP 1 Score: 192.2 bits (487), Expect = 1.1e-45
Identity = 119/231 (51.52%), Postives = 141/231 (61.04%), Query Frame = 1


Query: 12  RDLNFEATELRLGLLPRTEQERESQSESAEQSKSDSRSGSEYSIS--STNPSSDAEHLHC 71
           R LN +ATELRLGL    E E+ S + S   +K  S   SE S S  S++ SS+ E+   
Sbjct: 9   RHLNLKATELRLGLPGSDEPEKPSTTPSVRSNKRASPEISEESGSKGSSSLSSNVENSEG 68

Query: 72  REIHIIDHPPPAKAQVVGWPPVRSYLKNMIIEAEKKIQKEIMNKEVGSSGMYVKVSLDGA 131
                 D  PPAKAQVVGWPP+RSY KN +    KK      N  V  +GMYVKVS+DGA
Sbjct: 69  ------DDAPPAKAQVVGWPPIRSYRKNCL--QPKK------NDRVDGAGMYVKVSVDGA 128

Query: 132 PYLRKIDLKLYQSYQQLLDVLEDMFNIKLGNIKIYTFYMKIDFKLKLMHLHINLYGGNSE 191
           PYLRKIDLK+Y+SY +LL  LEDMF + +G                            SE
Sbjct: 129 PYLRKIDLKVYRSYPELLKALEDMFKLTIGEY--------------------------SE 188

Query: 192 KEGNNWCEYALTYEDKDGDWMMVGDVPWNMFICCCKRLRIMKGSDARGLGC 241
           KEG N  ++A TYEDKDGDWM+VGDVPW+MFI  CKRLRIMKGS+ARGLGC
Sbjct: 189 KEGYNGSDFAPTYEDKDGDWMLVGDVPWDMFISTCKRLRIMKGSEARGLGC 199

The following BLAST results are available for this feature:

BLAST of CmoCh15G011500 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AX22D_VIGRR	2.3e-45	47.60	Auxin-induced protein 22D OS=Vigna radiata var. radiata GN=AUX22D PE=2 SV=1	[more]
AX22B_VIGRR	5.8e-44	45.85	Auxin-induced protein 22B OS=Vigna radiata var. radiata GN=AUX22B PE=2 SV=1	[more]
AX22E_VIGRR	2.9e-43	45.26	Auxin-induced protein 22E OS=Vigna radiata var. radiata GN=AUX22E PE=2 SV=1	[more]
IAA4_PEA	9.2e-42	44.59	Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA4/5 PE=1 SV=1	[more]
IAA3_ARATH	1.8e-37	41.74	Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1	[more]

BLAST of CmoCh15G011500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKT1_CUCSA	1.0e-63	60.16	Auxin-responsive protein OS=Cucumis sativus GN=Csa_5G166440 PE=3 SV=1	[more]
E5GCU3_CUCME	1.1e-60	58.53	Auxin-responsive protein OS=Cucumis melo subsp. melo PE=3 SV=1	[more]
B9GS71_POPTR	7.3e-46	51.52	Auxin-responsive protein OS=Populus trichocarpa GN=POPTR_0002s04590g PE=3 SV=2	[more]
B9H8H0_POPTR	1.6e-45	51.30	Auxin-responsive protein OS=Populus trichocarpa GN=POPTR_0005s23970g PE=3 SV=1	[more]
L0AUF6_POPTO	2.1e-45	48.74	Auxin-responsive protein OS=Populus tomentosa PE=3 SV=1	[more]

BLAST of CmoCh15G011500 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04240.1	1.0e-38	41.74	AUX/IAA transcriptional regulator family protein	[more]
AT5G43700.1	5.0e-38	43.04	AUX/IAA transcriptional regulator family protein	[more]
AT3G23050.1	1.2e-36	45.45	indole-3-acetic acid 7	[more]
AT3G23030.1	6.8e-35	40.09	indole-3-acetic acid inducible 2	[more]
AT1G04250.1	6.8e-35	49.39	AUX/IAA transcriptional regulator family protein	[more]

BLAST of CmoCh15G011500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700195123\|gb\|KGN50300.1\|	1.5e-63	60.16	hypothetical protein Csa_5G166440 [Cucumis sativus]	[more]
gi\|659073289\|ref\|XP_008436982.1\|	1.5e-60	58.53	PREDICTED: auxin-induced protein 22D-like [Cucumis melo]	[more]
gi\|659100794\|ref\|XP_008451269.1\|	2.1e-46	51.74	PREDICTED: auxin-induced protein 22D-like [Cucumis melo]	[more]
gi\|743839865\|ref\|XP_011026050.1\|	6.2e-46	51.09	PREDICTED: auxin-induced protein 22D-like [Populus euphratica]	[more]
gi\|566156230\|ref\|XP_002300804.2\|	1.1e-45	51.52	auxin-induced protein 22B [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000270	PB1_dom
IPR003311	AUX_IAA

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G011500.1	CmoCh15G011500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000270	PB1 domain	PROFILE	PS51745	PB1	coord: 119..232 score: 24
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	FAMILY NOT NAMED	coord: 12..240 score: 5.3
None	No IPR available	PANTHER	PTHR31734:SF8	SUBFAMILY NOT NAMED	coord: 12..240 score: 5.3
None	No IPR available	unknown	SSF54277	CAD & PB1 domains	coord: 195..231 score: 7.85E-19coord: 116..162 score: 7.85

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G011500	Cucsa.129530	Cucumber (Gy14) v1	cgycmoB0343
CmoCh15G011500	CmaCh15G010910	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G011500	Cla003635	Watermelon (97103) v1	cmowmB265
CmoCh15G011500	Csa5G166440	Cucumber (Chinese Long) v2	cmocuB286
CmoCh15G011500	MELO3C005476	Melon (DHL92) v3.5.1	cmomeB250
CmoCh15G011500	ClCG01G004490	Watermelon (Charleston Gray)	cmowcgB247
CmoCh15G011500	CSPI05G07260	Wild cucumber (PI 183967)	cmocpiB295
CmoCh15G011500	Cp4.1LG13g02670	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G011500	MELO3C005476.2	Melon (DHL92) v3.6.1	cmomedB283
CmoCh15G011500	CsaV3_5G004700	Cucumber (Chinese Long) v3	cmocucB0347
CmoCh15G011500	Cla97C01G004700	Watermelon (97103) v2	cmowmbB270
CmoCh15G011500	Bhi12G000447	Wax gourd	cmowgoB0363
CmoCh15G011500	Carg23179	Silver-seed gourd	carcmoB0735

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G011500	Melon (DHL92) v3.6.1	cmomedB270
CmoCh15G011500	Silver-seed gourd	carcmoB0964
CmoCh15G011500	Silver-seed gourd	carcmoB1325
CmoCh15G011500	Cucurbita moschata (Rifu)	cmocmoB236
CmoCh15G011500	Cucurbita moschata (Rifu)	cmocmoB243
CmoCh15G011500	Cucurbita moschata (Rifu)	cmocmoB251
CmoCh15G011500	Cucurbita maxima (Rimu)	cmacmoB403
CmoCh15G011500	Cucurbita maxima (Rimu)	cmacmoB584
CmoCh15G011500	Melon (DHL92) v3.5.1	cmomeB238
CmoCh15G011500	Watermelon (Charleston Gray)	cmowcgB256
CmoCh15G011500	Watermelon (97103) v1	cmowmB260
CmoCh15G011500	Cucurbita pepo (Zucchini)	cmocpeB270
CmoCh15G011500	Cucurbita pepo (Zucchini)	cmocpeB264
CmoCh15G011500	Cucurbita pepo (Zucchini)	cmocpeB293
CmoCh15G011500	Bottle gourd (USVL1VR-Ls)	cmolsiB255
CmoCh15G011500	Cucumber (Gy14) v2	cgybcmoB583