CmoCh15G005200 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G005200
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(GTP-binding protein) (Rab5b, rab family GTPase)
Location	Cmo_Chr15 : 2433130 .. 2437100 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTGCTCCTCGTCTCTCCCTGGTATTTTCTCGAATTTCGTCGCTCCAGATTTGCTAGGGTTTTCAGATTCTTTATTCGTCTATTTAAGTCTGATCGAAGCGGTGGTGTATTGAGAATTTCGGAGGTCGATTGTTTGGTCTGTTTGGAGTTTTCTCGATTCCTTGATTTTCTTTTACGGGCGCATTAGGGTTTCGTGGGTTTCAGTTTTTAATTTTACTTGCAGAAGTTTATGTCGAGTTTCAATGATTTTTTGGGGGTTTGTAATGCAGACAGGGCTTCTGGGCGATCGGGTGTGCTTAATCCAGAGAACAATGCAGCTGATTCCAAGAATTTGCGCGTAAAGGTGTTGAGATGCAAAGCTTATTCACTTGTAATCCGATTCTTTTTAGTGTTAATGGAATAAGGCCCCTTAAGTGAGTTCGATGTTAGTCTGATAGTTGGTATTTGTTGACTTACAATTCTTTCCTGTATGAAGACAAACATAGGATGGCTAAGATGAAACAATGCTATTTTTAATTTAATGAGTTTTGAAGTTAAATACTGTGCTTACTTAGGAAGCTTAAAAGTTTTTATGATGTATTTTTTTAACATTCTTCTCTTTCTGACTTTATGCAGCTTGTCCTGCTAGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTTCGCTTTGTCCGTGGTCAGTTTGATCCGACGTCTAAGGTCAGAACTATGTTACAGTCCATAAATTCTTAAAATAAATCTATGCTCAATACAAATTAATTTACGCTTTTATCATTCCATTCCCGAAGGAATTACAATCGTTTGATTCAACATGTTTGTTGAGAAAATTCAGGTTACTGTTGGAGCATCGTTCTTGTCACAAACAATAGCTTTACAAGATTCCACAACAGTAAAATTCGAAATATGGGATACCGCTGGGCAAGAGAGGTAGGACTATCTTAATCTCTAGTTGATCCTCGAACACGTGTTTTTAATTTCTTAGCAAGTAACCTTATTCTCATTGGTAGCCATTTTCTAGCTTACTTCGTGTTTGCAAGAGATTTTTGTTGCAAAAGGTTATCACTGTTGATTTGTCTTGATTTAGGTATGCTGCATTAGCTCCACTTTACTATCGAGGTGCTGCAGTTGCAGTTATTGTATATGATATAACAAGCTCAGATTCCTTCGCCAAAGCACAATATTGGGTTAAGGTAAGTTTTAAAGTGGTTAAGTAGTTTTTGTACTATATTTATTGCTTGTGATTGCTGTGTCGATTCAAGTCCAAATTGTATCCATGGGCCTTTTACTTGCGATGTTCTTGTTTCATAGTCATCGTGCATAAATGAAGCTAAAACTATGAGGCAATTCCTCATTAGTTGAGCATCCCATTCATTGATGACCAAATTTGGAACAAAGGGGAATTCTTTTTAATCTATGAGAAGATTATCGGATAATCACATTCTTCACTACCTATCTGTTGTTCCCTTGTAGCTTCTCCTCATTTTCTCCTCTTTTCCTTTTATGATCCTCATTCTCCTGACTCCTACCTTTCTTTTCAATTTGTTTCTTTATAAATGATGCTATTTCCTACCCGGGAAGAAAAATAAATAAATAAAAGAAGAAGAAGAAGAAGAAGAAGAGGGAGGAAGACAAGACGGTCTTTTCTTTGTTTTTTTCTTGGCTTCAAATCAATCAATGCGATCATGTCTACAAAGTTCCGTCCCATTTTTAAAATATCAACAAAATTGTAACAGCCATAGCCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTTGGACTCCCCCTCAAGGTTTTAAAACGCGTCTGTTAGGGAGAGGTTTCCACACCCTTATAAGGAATGCTTTGTTCCCCTCTCCATCCAATGTGGGATCTCACCATCCACCCCTCTTGGGACATTGCCCAGTGTCTGGTTTTGATACCATTTGTAGCAACTCTAGCCTACTGCTAGCAGATATTGTCCTCTTTGTGTTTCCCCTTTTGGGTTTCCCCTCAAGGTTTTAAAACACGTCTGCTAGGGAGAGGTTTCCACCCCCTTATAAGGAATGCTTCATTCCCCTCTCGAACTAATGTGAGATCTCACAAAGATTCTCACGAGTGGAGTGGTTTTTTTTTCTCTTTTCTTTCTTCCCTTTTATGCAATTAGTTGTTTGTTTTAAAAATCAACCCGTCCATGCCCTATGCACAATTAGTTTTTTTTTTTTTTGAGTTGAAAATTATATTAAAAAGGCTGAGTTTGAATGTGTTCGTTCATTTTGATTGGGTTTTCCTTTGAGCTTTGACTAATTCACAATCTTCATGATTCATATTGGGCATATTGGGCACTTACAGGAGCTACAGAAGCATGGCAGCCCTGATATCATTTTGGCATTGGTCGGTAACAAAGCCGATCTTCTAGAGAAAAGAAAAGTATCTGTTCAGGTAAATTCAGTGTTATTCAATCAAATGGCGTCTTGCAAAATGGGGAAAAGATCTTGTAACTCACTAATATGAGATACTTATGTTTCACTTTGGAAGGATGGAACGGAGTATGCAGAGAAGAATGGAATGTTCTTTATTGAGACATCTGCAAAGACTGCAGATAATATAAACGAGCTGTTTGAGGTATTCCTGATTTTATCCTTTTCGTATGACTTTCATAGCTGCTGTTGGTATATAAGTTTGTATAGCGATTTTTATGATATTCCATAGTTTGAAGAGCGGTATTAAACAGTTTTAATTATTTTCTACCATCCCATAGTGCACGTTGACGTTTAGAAGTTCAGAATCTGCTTTAGTCATTGTCATAGCCAGAAATCTTCATAATATTCATTAGAGTTGCGGAACTTTAGCAAACCAATTCTCAATTGGTAATTGAAATCCAGAAGATGTGAAGTTCGAACGTTCTTTCACCCCAGCTTCTTGTATGGTGGTTGTATCTATCATTATGCTAGCTCCATAAGGTGTCGAACGTTCACCTTAAATCTCTATCGGTGGTTCTATCTTTTGTCACGATTGCTCAACGCCACCATTAAAATGGTGGCTCGCTGGAGGTCAAGTTCAGTTGGAATTTTTCTGACTGTTACCTCTTAGCTTAGCTGATTTGTTGTTTGTTTGGACTAGAATGTTCTTTCGCCTATCTCTCTAATTCGTGTGTGCTCGTTCGGATGCTTTATGAAACAGCTAGTTGTTAGGATTTTTTTTATATGACTGACCTTTTTGTTGAAAAAATGGACTAGTCCTCTGATAATTAGTTATTTTGTATACTTTACCCGAAAATTGAAATCTTTGAGAAATACACTTCGTGGCTTGAATTATGTGAAGACGTTCGATAGTTTTGTCGTGATCACTTAGCTGAGACCCTGTCTCCCTTTCATATAACGCTTCTCTAGAAACACATTTCACCAGATGTCTAAGATCCATGACCCTGTTTCCATTCAAATACATTTCAAGACCAAACATTTCTTCTTTATTTGATTTGGCAGGAGATAGCGAAGCGCTTGCCACGACCAACTTCCTCGTGATCTTGCCGTGACGTGAATGATTTTATCAGCAGCAGCAGCAGCAGCTTAATTTTCAGGAAATCAGCTTGCTCCCATGTGATCTGTGTATAGTTCGGTGAGTCCTGCAGCCTTATGATTTGTTATTTGATTTGACTTGTTGATATCTTAAATCTAAAAGTGTAACATTAAACAGATATGAAAATGGCGAAAAGATTCATTCCCCCTTTAAACCACAAACTGCATTTGTAAACTATATTTGCTGTGACTCATAGAATCATTACTTATAGAATTTAGTTGGAGTGGATAAACTGAAACTCTATATGCAATCTCTAAGTGCATTGAAGGGATCAACTGGGCACTCGTTTCTATGTGGATGGGTTTATCTTGAGTGAATCTTTTAGTCGAGAGTATATAGTCTATGTCAGTTGAAATATGCTTATGTTCGTGGAAAGCTTTTAGAATATTCCGAACTCAGCCAAAT

mRNA sequence

ATGGGCTGCTCCTCGTCTCTCCCTGACAGGGCTTCTGGGCGATCGGGTGTGCTTAATCCAGAGAACAATGCAGCTGATTCCAAGAATTTGCGCGTAAAGCTTGTCCTGCTAGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTTCGCTTTGTCCGTGGTCAGTTTGATCCGACGTCTAAGGTTACTGTTGGAGCATCGTTCTTGTCACAAACAATAGCTTTACAAGATTCCACAACAGTAAAATTCGAAATATGGGATACCGCTGGGCAAGAGAGGTATGCTGCATTAGCTCCACTTTACTATCGAGGTGCTGCAGTTGCAGTTATTGTATATGATATAACAAGCTCAGATTCCTTCGCCAAAGCACAATATTGGGTTAAGGAGCTACAGAAGCATGGCAGCCCTGATATCATTTTGGCATTGGTCGGTAACAAAGCCGATCTTCTAGAGAAAAGAAAAGTATCTGTTCAGGTAAATTCAGATGGAACGGAGTATGCAGAGAAGAATGGAATGTTCTTTATTGAGACATCTGCAAAGACTGCAGATAATATAAACGAGCTGTTTGAGGAGATAGCGAAGCGCTTGCCACGACCAACTTCCTCGTGATCTTGCCGTGACGTGAATGATTTTATCAGCAGCAGCAGCAGCAGCTTAATTTTCAGGAAATCAGCTTGCTCCCATGTGATCTGTGTATAGTTCGGTGAGTCCTGCAGCCTTATGATTTGTTATTTGATTTGACTTGTTGATATCTTAAATCTAAAAGTGTAACATTAAACAGATATGAAAATGGCGAAAAGATTCATTCCCCCTTTAAACCACAAACTGCATTTGTAAACTATATTTGCTGTGACTCATAGAATCATTACTTATAGAATTTAGTTGGAGTGGATAAACTGAAACTCTATATGCAATCTCTAAGTGCATTGAAGGGATCAACTGGGCACTCGTTTCTATGTGGATGGGTTTATCTTGAGTGAATCTTTTAGTCGAGAGTATATAGTCTATGTCAGTTGAAATATGCTTATGTTCGTGGAAAGCTTTTAGAATATTCCGAACTCAGCCAAAT

Coding sequence (CDS)

ATGGGCTGCTCCTCGTCTCTCCCTGACAGGGCTTCTGGGCGATCGGGTGTGCTTAATCCAGAGAACAATGCAGCTGATTCCAAGAATTTGCGCGTAAAGCTTGTCCTGCTAGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTTCGCTTTGTCCGTGGTCAGTTTGATCCGACGTCTAAGGTTACTGTTGGAGCATCGTTCTTGTCACAAACAATAGCTTTACAAGATTCCACAACAGTAAAATTCGAAATATGGGATACCGCTGGGCAAGAGAGGTATGCTGCATTAGCTCCACTTTACTATCGAGGTGCTGCAGTTGCAGTTATTGTATATGATATAACAAGCTCAGATTCCTTCGCCAAAGCACAATATTGGGTTAAGGAGCTACAGAAGCATGGCAGCCCTGATATCATTTTGGCATTGGTCGGTAACAAAGCCGATCTTCTAGAGAAAAGAAAAGTATCTGTTCAGGTAAATTCAGATGGAACGGAGTATGCAGAGAAGAATGGAATGTTCTTTATTGAGACATCTGCAAAGACTGCAGATAATATAAACGAGCTGTTTGAGGAGATAGCGAAGCGCTTGCCACGACCAACTTCCTCGTGA

Homology

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BLAST of CmoCh15G005200 vs. Swiss-Prot
Match: RABF1_ARATH (Ras-related protein RABF1 OS=Arabidopsis thaliana GN=RABF1 PE=1 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 2.7e-87
Identity = 171/204 (83.82%), Postives = 181/204 (88.73%), Query Frame = 1


Query: 1   MGCSSSLPDRASGR-SGVLNPENNA-ADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP 60
           MGC+SSLPDR SG  SG+ N EN   AD+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFD 
Sbjct: 1   MGCASSLPDRNSGTLSGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDA 60

Query: 61  TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSD 120
           TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERY+ALAPLYYRGA VAVIVYDITS +
Sbjct: 61  TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPE 120

Query: 121 SFAKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETS 180
           SF KAQYWVKELQKHGSPDI++ALVGNKADL EKR+V  +   DG E AEKNGMFFIETS
Sbjct: 121 SFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTE---DGMELAEKNGMFFIETS 180

Query: 181 AKTADNINELFEEIAKRLPRPTSS 203
           AKTADNIN+LFEEI KRLPRP  S
Sbjct: 181 AKTADNINQLFEEIGKRLPRPAPS 201

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BLAST of CmoCh15G005200 vs. Swiss-Prot
Match: RAB5C_BOVIN (Ras-related protein Rab-5C OS=Bos taurus GN=RAB5C PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.4e-56
Identity = 111/187 (59.36%), Postives = 142/187 (75.94%), Query Frame = 1


Query: 12  SGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQ 71
           +GR G   P   AA +K  + KLVLLG+S VGKS +VLRFV+GQF    + T+GA+FL+Q
Sbjct: 2   AGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 61

Query: 72  TIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQ 131
           T+ L D TTVKFEIWDTAGQERY +LAP+YYRGA  A++VYDIT++D+FA+A+ WVKELQ
Sbjct: 62  TVCLDD-TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 121

Query: 132 KHGSPDIILALVGNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETSAKTADNINELFEE 191
           +  SP+I++AL GNKADL  KR V  Q   +   YAE N + F+ETSAKTA N+NE+F  
Sbjct: 122 RQASPNIVIALAGNKADLASKRAVEFQ---EAQAYAEDNSLLFMETSAKTAMNVNEIFMA 181

Query: 192 IAKRLPR 199
           IAK+LP+
Sbjct: 182 IAKKLPK 184

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BLAST of CmoCh15G005200 vs. Swiss-Prot
Match: RAB5C_MOUSE (Ras-related protein Rab-5C OS=Mus musculus GN=Rab5c PE=1 SV=2)

HSP 1 Score: 219.5 bits (558), Expect = 3.2e-56
Identity = 110/187 (58.82%), Postives = 142/187 (75.94%), Query Frame = 1


Query: 12  SGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQ 71
           +GR G   P   AA +K  + KLVLLG+S VGKS +VLRFV+GQF    + T+GA+FL+Q
Sbjct: 2   AGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 61

Query: 72  TIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQ 131
           T+ L D TTVKFEIWDTAGQERY +LAP+YYRGA  A++VYDIT++D+FA+A+ WVKELQ
Sbjct: 62  TVCLDD-TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 121

Query: 132 KHGSPDIILALVGNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETSAKTADNINELFEE 191
           +  SP+I++AL GNKADL  KR V  Q   +   YA+ N + F+ETSAKTA N+NE+F  
Sbjct: 122 RQASPNIVIALAGNKADLASKRAVEFQ---EAQAYADDNSLLFMETSAKTAMNVNEIFMA 181

Query: 192 IAKRLPR 199
           IAK+LP+
Sbjct: 182 IAKKLPK 184

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BLAST of CmoCh15G005200 vs. Swiss-Prot
Match: RAB5C_HUMAN (Ras-related protein Rab-5C OS=Homo sapiens GN=RAB5C PE=1 SV=2)

HSP 1 Score: 219.5 bits (558), Expect = 3.2e-56
Identity = 110/187 (58.82%), Postives = 142/187 (75.94%), Query Frame = 1


Query: 12  SGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQ 71
           +GR G   P   AA +K  + KLVLLG+S VGKS +VLRFV+GQF    + T+GA+FL+Q
Sbjct: 2   AGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 61

Query: 72  TIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQ 131
           T+ L D TTVKFEIWDTAGQERY +LAP+YYRGA  A++VYDIT++D+FA+A+ WVKELQ
Sbjct: 62  TVCLDD-TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 121

Query: 132 KHGSPDIILALVGNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETSAKTADNINELFEE 191
           +  SP+I++AL GNKADL  KR V  Q   +   YA+ N + F+ETSAKTA N+NE+F  
Sbjct: 122 RQASPNIVIALAGNKADLASKRAVEFQ---EAQAYADDNSLLFMETSAKTAMNVNEIFMA 181

Query: 192 IAKRLPR 199
           IAK+LP+
Sbjct: 182 IAKKLPK 184

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BLAST of CmoCh15G005200 vs. Swiss-Prot
Match: RAB5C_CANLF (Ras-related protein Rab-5C OS=Canis lupus familiaris GN=RAB5C PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.2e-56
Identity = 110/187 (58.82%), Postives = 142/187 (75.94%), Query Frame = 1


Query: 12  SGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQ 71
           +GR G   P   AA +K  + KLVLLG+S VGKS +VLRFV+GQF    + T+GA+FL+Q
Sbjct: 2   AGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 61

Query: 72  TIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQ 131
           T+ L D TTVKFEIWDTAGQERY +LAP+YYRGA  A++VYDIT++D+FA+A+ WVKELQ
Sbjct: 62  TVCLDD-TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 121

Query: 132 KHGSPDIILALVGNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETSAKTADNINELFEE 191
           +  SP+I++AL GNKADL  KR V  Q   +   YA+ N + F+ETSAKTA N+NE+F  
Sbjct: 122 RQASPNIVIALAGNKADLASKRAVEFQ---EAQAYADDNSLLFMETSAKTAMNVNEIFMA 181

Query: 192 IAKRLPR 199
           IAK+LP+
Sbjct: 182 IAKKLPK 184

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BLAST of CmoCh15G005200 vs. TrEMBL
Match: A0A0A0KJ92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G406530 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.1e-100
Identity = 194/202 (96.04%), Postives = 197/202 (97.52%), Query Frame = 1


Query: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGCSSS+PDRASGRSG LNPEN+AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGCSSSVPDRASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120
           KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETSAK 180
           AKAQYWVKELQKHGSPDIILALVGNKADL EKRKV+VQ   DGTEYAEKNGMFFIETSAK
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVTVQ---DGTEYAEKNGMFFIETSAK 180

Query: 181 TADNINELFEEIAKRLPRPTSS 203
           TADNINELFEEIAKRLPRPTSS
Sbjct: 181 TADNINELFEEIAKRLPRPTSS 199

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BLAST of CmoCh15G005200 vs. TrEMBL
Match: A0A068TWQ4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00029468001 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 1.9e-92
Identity = 180/203 (88.67%), Postives = 189/203 (93.10%), Query Frame = 1


Query: 1   MGCSSSLPDRASGRSGVLNPENNAA-DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60
           MGCSSSLPDR SGR G LNPEN +A DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
Sbjct: 1   MGCSSSLPDRNSGRLGGLNPENGSANDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60

Query: 61  SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDS 120
           SKVT+GASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAV+VYDITS +S
Sbjct: 61  SKVTIGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPES 120

Query: 121 FAKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETSA 180
           FAKAQYWVKELQKHGSP +I+ALVGNKADL EKR+VS Q   DG EYAEKNGMFFIETSA
Sbjct: 121 FAKAQYWVKELQKHGSPGMIMALVGNKADLQEKREVSAQ---DGMEYAEKNGMFFIETSA 180

Query: 181 KTADNINELFEEIAKRLPRPTSS 203
           KTADNIN+LFEEIAKRLPRP +S
Sbjct: 181 KTADNINQLFEEIAKRLPRPPAS 200

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BLAST of CmoCh15G005200 vs. TrEMBL
Match: A0A059BHW6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02863 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 1.7e-91
Identity = 177/203 (87.19%), Postives = 188/203 (92.61%), Query Frame = 1


Query: 1   MGCSSSLPDRASGRSGVLNPENNAA-DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60
           MGCSSSLPDRASGR G LN EN A  D+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
Sbjct: 1   MGCSSSLPDRASGRLGGLNSENGAVNDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60

Query: 61  SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDS 120
           SKVT+GASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAV+VYDITS +S
Sbjct: 61  SKVTIGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPES 120

Query: 121 FAKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETSA 180
           F KAQYWVKELQKHGSPD+++ALVGNKADL E R+V+VQ   DG +YAEKNGMFFIETSA
Sbjct: 121 FQKAQYWVKELQKHGSPDMVMALVGNKADLQENREVTVQ---DGIDYAEKNGMFFIETSA 180

Query: 181 KTADNINELFEEIAKRLPRPTSS 203
           KTADNIN+LFEEIAKRLPRPT S
Sbjct: 181 KTADNINQLFEEIAKRLPRPTPS 200

[Close]

BLAST of CmoCh15G005200 vs. TrEMBL
Match: A5BW15_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g04680 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 6.3e-91
Identity = 178/203 (87.68%), Postives = 187/203 (92.12%), Query Frame = 1


Query: 1   MGCSSSLPDRASGRSGVLNPENNAA-DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60
           MGCSSSLPDR SGR G LN EN  A D+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
Sbjct: 1   MGCSSSLPDRNSGRLGGLNAENGGAPDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60

Query: 61  SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDS 120
           SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAV+VYDITS +S
Sbjct: 61  SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPES 120

Query: 121 FAKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETSA 180
           F KAQYWVKELQKHGSPDI++ALVGNKADL E R+V VQ   DG +YAEKNGMFFIETSA
Sbjct: 121 FNKAQYWVKELQKHGSPDIVMALVGNKADLHENREVPVQ---DGIDYAEKNGMFFIETSA 180

Query: 181 KTADNINELFEEIAKRLPRPTSS 203
           KTADNIN+LFEEIAKRLPRP+SS
Sbjct: 181 KTADNINQLFEEIAKRLPRPSSS 200

[Close]

BLAST of CmoCh15G005200 vs. TrEMBL
Match: A0A0R4J478_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G208300 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 1.8e-90
Identity = 177/203 (87.19%), Postives = 187/203 (92.12%), Query Frame = 1


Query: 1   MGCSSSLPDRASGRSGVLNPENNAA-DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60
           MGC SSLPDR S + G  N EN    D+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
Sbjct: 1   MGCGSSLPDRGSRQLGRPNSENGGGQDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60

Query: 61  SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDS 120
           SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITS +S
Sbjct: 61  SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPES 120

Query: 121 FAKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETSA 180
           F+KAQYWVKELQKHGSPDI++ALVGNKADLLEKR+V+VQ   DGT+YAEKNGMFFIETSA
Sbjct: 121 FSKAQYWVKELQKHGSPDIVMALVGNKADLLEKREVAVQ---DGTDYAEKNGMFFIETSA 180

Query: 181 KTADNINELFEEIAKRLPRPTSS 203
           KTADNINELFEEIAKRLPRP+ S
Sbjct: 181 KTADNINELFEEIAKRLPRPSVS 200

[Close]

BLAST of CmoCh15G005200 vs. TAIR10
Match: AT3G54840.1 (AT3G54840.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 322.8 bits (826), Expect = 1.5e-88
Identity = 171/204 (83.82%), Postives = 181/204 (88.73%), Query Frame = 1


Query: 1   MGCSSSLPDRASGR-SGVLNPENNA-ADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP 60
           MGC+SSLPDR SG  SG+ N EN   AD+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFD 
Sbjct: 1   MGCASSLPDRNSGTLSGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDA 60

Query: 61  TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSD 120
           TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERY+ALAPLYYRGA VAVIVYDITS +
Sbjct: 61  TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPE 120

Query: 121 SFAKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETS 180
           SF KAQYWVKELQKHGSPDI++ALVGNKADL EKR+V  +   DG E AEKNGMFFIETS
Sbjct: 121 SFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTE---DGMELAEKNGMFFIETS 180

Query: 181 AKTADNINELFEEIAKRLPRPTSS 203
           AKTADNIN+LFEEI KRLPRP  S
Sbjct: 181 AKTADNINQLFEEIGKRLPRPAPS 201

[Close]

BLAST of CmoCh15G005200 vs. TAIR10
Match: AT4G19640.1 (AT4G19640.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 213.0 bits (541), Expect = 1.7e-55
Identity = 104/175 (59.43%), Postives = 140/175 (80.00%), Query Frame = 1


Query: 24  AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKF 83
           AA +K++  KLVLLGD G GKS +VLRFV+ QF    + T+GA+F SQT+A+ D+ TVKF
Sbjct: 3   AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA-TVKF 62

Query: 84  EIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQKHGSPDIILALV 143
           EIWDTAGQERY +LAP+YYRGAA A+IV+D+T+  SF +A+ WV+ELQ  G+P++++AL 
Sbjct: 63  EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA 122

Query: 144 GNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLPR 199
           GNK+DLL+ RKV+ +   D   YA++NG+FF+ETSAKTA N+ E+F EIA+RLPR
Sbjct: 123 GNKSDLLDARKVTAE---DAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173

[Close]

BLAST of CmoCh15G005200 vs. TAIR10
Match: AT5G45130.1 (AT5G45130.1 RAB homolog 1)

HSP 1 Score: 210.7 bits (535), Expect = 8.5e-55
Identity = 104/175 (59.43%), Postives = 139/175 (79.43%), Query Frame = 1


Query: 24  AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKF 83
           ++ +KN+  KLVLLGD G GKS +VLRFV+ QF    + T+GA+F SQT+A+ D+ TVKF
Sbjct: 3   SSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA-TVKF 62

Query: 84  EIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQKHGSPDIILALV 143
           EIWDTAGQERY +LAP+YYRGAA A+IV+DIT+  SF +A+ WV+ELQ  G+P++++AL 
Sbjct: 63  EIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALA 122

Query: 144 GNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLPR 199
           GNKADLL+ RKVS +   +   YA++N +FF+ETSAKTA N+ ++F EIAKRLPR
Sbjct: 123 GNKADLLDARKVSAE---EAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPR 173

[Close]

BLAST of CmoCh15G005200 vs. TAIR10
Match: AT2G22290.1 (AT2G22290.1 RAB GTPase homolog H1D)

HSP 1 Score: 157.1 bits (396), Expect = 1.1e-38
Identity = 83/175 (47.43%), Postives = 118/175 (67.43%), Query Frame = 1


Query: 24  AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKF 83
           A+ S   + KLV LGD  VGK+ I+ RF+  +FD T + T+G  FLS+T+ L+D T V+ 
Sbjct: 2   ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRL 61

Query: 84  EIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQKHGSPDIILALV 143
           ++WDTAGQER+ +L P Y R ++VAV+VYD+ +  SF     W++E++   + D+I+ LV
Sbjct: 62  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLV 121

Query: 144 GNKADLLEKRKVSVQV-NSDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLP 198
           GNK DL+EKR+VS++  +S G EY    G+ FIETSAK   NI  LF +IA  LP
Sbjct: 122 GNKTDLVEKRQVSIEEGDSKGREY----GVMFIETSAKAGFNIKPLFRKIAAALP 171

[Close]

BLAST of CmoCh15G005200 vs. TAIR10
Match: AT5G10260.1 (AT5G10260.1 RAB GTPase homolog H1E)

HSP 1 Score: 156.4 bits (394), Expect = 1.9e-38
Identity = 80/174 (45.98%), Postives = 115/174 (66.09%), Query Frame = 1


Query: 24  AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKF 83
           A+ S   + KLV LGD  VGK+ I+ RF+  +FD T + T+G  FLS+T+ L+D T V+ 
Sbjct: 2   ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRL 61

Query: 84  EIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQKHGSPDIILALV 143
           ++WDTAGQER+ +L P Y R ++VAVIVYD+ +  SF     W+++++     D+I+ LV
Sbjct: 62  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 121

Query: 144 GNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLP 198
           GNK DL++KR+VS++   +G   A   G+ FIETSAK   NI  LF +IA  LP
Sbjct: 122 GNKTDLVDKRQVSIE---EGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALP 171

[Close]

BLAST of CmoCh15G005200 vs. NCBI nr
Match: gi|659113325|ref|XP_008456515.1| (PREDICTED: ras-related protein RABF1 [Cucumis melo])

HSP 1 Score: 375.2 bits (962), Expect = 7.3e-101
Identity = 195/202 (96.53%), Postives = 197/202 (97.52%), Query Frame = 1


Query: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGCSSS+PDRASGRSG LNPEN+AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGCSSSVPDRASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120
           KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETSAK 180
           AKAQYWVKELQKHGSPDIILALVGNKADL EKRKVSVQ   DGTEYAEKNGMFFIETSAK
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVSVQ---DGTEYAEKNGMFFIETSAK 180

Query: 181 TADNINELFEEIAKRLPRPTSS 203
           TADNINELFEEIAKRLPRPTSS
Sbjct: 181 TADNINELFEEIAKRLPRPTSS 199

[Close]

BLAST of CmoCh15G005200 vs. NCBI nr
Match: gi|449444622|ref|XP_004140073.1| (PREDICTED: ras-related protein RABF1 [Cucumis sativus])

HSP 1 Score: 374.0 bits (959), Expect = 1.6e-100
Identity = 194/202 (96.04%), Postives = 197/202 (97.52%), Query Frame = 1


Query: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGCSSS+PDRASGRSG LNPEN+AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGCSSSVPDRASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120
           KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETSAK 180
           AKAQYWVKELQKHGSPDIILALVGNKADL EKRKV+VQ   DGTEYAEKNGMFFIETSAK
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVTVQ---DGTEYAEKNGMFFIETSAK 180

Query: 181 TADNINELFEEIAKRLPRPTSS 203
           TADNINELFEEIAKRLPRPTSS
Sbjct: 181 TADNINELFEEIAKRLPRPTSS 199

[Close]

BLAST of CmoCh15G005200 vs. NCBI nr
Match: gi|661896589|emb|CDO99778.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 346.7 bits (888), Expect = 2.8e-92
Identity = 180/203 (88.67%), Postives = 189/203 (93.10%), Query Frame = 1


Query: 1   MGCSSSLPDRASGRSGVLNPENNAA-DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60
           MGCSSSLPDR SGR G LNPEN +A DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
Sbjct: 1   MGCSSSLPDRNSGRLGGLNPENGSANDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60

Query: 61  SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDS 120
           SKVT+GASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAV+VYDITS +S
Sbjct: 61  SKVTIGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPES 120

Query: 121 FAKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETSA 180
           FAKAQYWVKELQKHGSP +I+ALVGNKADL EKR+VS Q   DG EYAEKNGMFFIETSA
Sbjct: 121 FAKAQYWVKELQKHGSPGMIMALVGNKADLQEKREVSAQ---DGMEYAEKNGMFFIETSA 180

Query: 181 KTADNINELFEEIAKRLPRPTSS 203
           KTADNIN+LFEEIAKRLPRP +S
Sbjct: 181 KTADNINQLFEEIAKRLPRPPAS 200

[Close]

BLAST of CmoCh15G005200 vs. NCBI nr
Match: gi|702423697|ref|XP_010067332.1| (PREDICTED: ras-related protein RABF1 [Eucalyptus grandis])

HSP 1 Score: 343.6 bits (880), Expect = 2.4e-91
Identity = 177/203 (87.19%), Postives = 188/203 (92.61%), Query Frame = 1


Query: 1   MGCSSSLPDRASGRSGVLNPENNAA-DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60
           MGCSSSLPDRASGR G LN EN A  D+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
Sbjct: 1   MGCSSSLPDRASGRLGGLNSENGAVNDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60

Query: 61  SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDS 120
           SKVT+GASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAV+VYDITS +S
Sbjct: 61  SKVTIGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPES 120

Query: 121 FAKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETSA 180
           F KAQYWVKELQKHGSPD+++ALVGNKADL E R+V+VQ   DG +YAEKNGMFFIETSA
Sbjct: 121 FQKAQYWVKELQKHGSPDMVMALVGNKADLQENREVTVQ---DGIDYAEKNGMFFIETSA 180

Query: 181 KTADNINELFEEIAKRLPRPTSS 203
           KTADNIN+LFEEIAKRLPRPT S
Sbjct: 181 KTADNINQLFEEIAKRLPRPTPS 200

[Close]

BLAST of CmoCh15G005200 vs. NCBI nr
Match: gi|1009121266|ref|XP_015877366.1| (PREDICTED: ras-related protein RABF1 [Ziziphus jujuba])

HSP 1 Score: 342.8 bits (878), Expect = 4.0e-91
Identity = 180/203 (88.67%), Postives = 188/203 (92.61%), Query Frame = 1


Query: 1   MGCSSSLPDRASGRSGVLNPENNAA-DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60
           MGCSSSLPDR+SGR    N EN  A D+KN+RVKLVLLGDSGVGKSCIVLRFVRGQFDPT
Sbjct: 1   MGCSSSLPDRSSGRLVGTNSENGGAPDAKNIRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60

Query: 61  SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDS 120
           SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAV+VYDITS DS
Sbjct: 61  SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPDS 120

Query: 121 FAKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQVNSDGTEYAEKNGMFFIETSA 180
           FAKAQYWVKELQKHGSPDII+ALVGNKADL EKR+VSVQ   DG E AEKNGMFFIETSA
Sbjct: 121 FAKAQYWVKELQKHGSPDIIMALVGNKADLHEKREVSVQ---DGIECAEKNGMFFIETSA 180

Query: 181 KTADNINELFEEIAKRLPRPTSS 203
           KTADNIN+LFEEIAKRLPRPT+S
Sbjct: 181 KTADNINQLFEEIAKRLPRPTTS 200

The following BLAST results are available for this feature:

BLAST of CmoCh15G005200 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RABF1_ARATH	2.7e-87	83.82	Ras-related protein RABF1 OS=Arabidopsis thaliana GN=RABF1 PE=1 SV=1	[more]
RAB5C_BOVIN	1.4e-56	59.36	Ras-related protein Rab-5C OS=Bos taurus GN=RAB5C PE=2 SV=1	[more]
RAB5C_MOUSE	3.2e-56	58.82	Ras-related protein Rab-5C OS=Mus musculus GN=Rab5c PE=1 SV=2	[more]
RAB5C_HUMAN	3.2e-56	58.82	Ras-related protein Rab-5C OS=Homo sapiens GN=RAB5C PE=1 SV=2	[more]
RAB5C_CANLF	3.2e-56	58.82	Ras-related protein Rab-5C OS=Canis lupus familiaris GN=RAB5C PE=2 SV=1	[more]

BLAST of CmoCh15G005200 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ92_CUCSA	1.1e-100	96.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G406530 PE=4 SV=1	[more]
A0A068TWQ4_COFCA	1.9e-92	88.67	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00029468001 PE=4 SV=1	[more]
A0A059BHW6_EUCGR	1.7e-91	87.19	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02863 PE=4 SV=1	[more]
A5BW15_VITVI	6.3e-91	87.68	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g04680 PE=4 SV=...	[more]
A0A0R4J478_SOYBN	1.8e-90	87.19	Uncharacterized protein OS=Glycine max GN=GLYMA_10G208300 PE=4 SV=1	[more]

BLAST of CmoCh15G005200 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G54840.1	1.5e-88	83.82	Ras-related small GTP-binding family protein	[more]
AT4G19640.1	1.7e-55	59.43	Ras-related small GTP-binding family protein	[more]
AT5G45130.1	8.5e-55	59.43	RAB homolog 1	[more]
AT2G22290.1	1.1e-38	47.43	RAB GTPase homolog H1D	[more]
AT5G10260.1	1.9e-38	45.98	RAB GTPase homolog H1E	[more]

BLAST of CmoCh15G005200 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659113325\|ref\|XP_008456515.1\|	7.3e-101	96.53	PREDICTED: ras-related protein RABF1 [Cucumis melo]	[more]
gi\|449444622\|ref\|XP_004140073.1\|	1.6e-100	96.04	PREDICTED: ras-related protein RABF1 [Cucumis sativus]	[more]
gi\|661896589\|emb\|CDO99778.1\|	2.8e-92	88.67	unnamed protein product [Coffea canephora]	[more]
gi\|702423697\|ref\|XP_010067332.1\|	2.4e-91	87.19	PREDICTED: ras-related protein RABF1 [Eucalyptus grandis]	[more]
gi\|1009121266\|ref\|XP_015877366.1\|	4.0e-91	88.67	PREDICTED: ras-related protein RABF1 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045022	early endosome to late endosome transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0010009	cytoplasmic side of endosome membrane
cellular_component	GO:0005769	early endosome
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G005200.1	CmoCh15G005200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 33..196 score: 1.1
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 32..192 score: 8.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 24..199 score: 4.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 28..200 score: 1.8
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 136..149 score: 4.1E-38coord: 74..96 score: 4.1E-38coord: 55..71 score: 4.1E-38coord: 174..196 score: 4.1E-38coord: 32..53 score: 4.1
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 24..198 score: 1.6
None	No IPR available	PANTHER	PTHR24073:SF485	RAS-RELATED PROTEIN RABJ	coord: 24..198 score: 1.6
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 33..199 score: 5.4
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 34..199 score: 7.5
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 32..199 score: 4.7
None	No IPR available	PROFILE	PS51419	RAB	coord: 27..202 score: 31

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G005200	Cucsa.137500	Cucumber (Gy14) v1	cgycmoB0378
CmoCh15G005200	CmaCh04G025610	Cucurbita maxima (Rimu)	cmacmoB686
CmoCh15G005200	CmaCh15G005120	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G005200	Csa6G406530	Cucumber (Chinese Long) v2	cmocuB303
CmoCh15G005200	MELO3C019819	Melon (DHL92) v3.5.1	cmomeB260
CmoCh15G005200	CSPI06G21570	Wild cucumber (PI 183967)	cmocpiB312
CmoCh15G005200	Lsi08G007060	Bottle gourd (USVL1VR-Ls)	cmolsiB281
CmoCh15G005200	Cp4.1LG01g24510	Cucurbita pepo (Zucchini)	cmocpeB272
CmoCh15G005200	Cp4.1LG13g10460	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G005200	MELO3C019819.2	Melon (DHL92) v3.6.1	cmomedB294
CmoCh15G005200	CsaV3_6G036650	Cucumber (Chinese Long) v3	cmocucB0366
CmoCh15G005200	Cla97C08G150440	Watermelon (97103) v2	cmowmbB303
CmoCh15G005200	Bhi04G001071	Wax gourd	cmowgoB0387
CmoCh15G005200	CsGy6G020850	Cucumber (Gy14) v2	cgybcmoB728
CmoCh15G005200	Carg01686	Silver-seed gourd	carcmoB1118
CmoCh15G005200	Carg04572	Silver-seed gourd	carcmoB0937

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh15G005200	CmoCh04G026800	Cucurbita moschata (Rifu)	cmocmoB255

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G005200	Silver-seed gourd	carcmoB0936
CmoCh15G005200	Watermelon (97103) v2	cmowmbB300
CmoCh15G005200	Melon (DHL92) v3.5.1	cmomeB262
CmoCh15G005200	Watermelon (Charleston Gray)	cmowcgB263
CmoCh15G005200	Watermelon (97103) v1	cmowmB248
CmoCh15G005200	Bottle gourd (USVL1VR-Ls)	cmolsiB282