CmoCh14G021510 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh14G021510
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Copper ion-binding protein
Location	Cmo_Chr14 : 15478978 .. 15479724 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCCGTTTCGCGAAGTTGAAATCTCTGGTGCCATCTGCAGATTCCGGCAGCTACCATTTGCTTCAAAGGTGCTGGGTGAGTGGTACTGCCAAAGGAAAATCAAAAATCAAAGCTGGGCAACAGCTGAAGCGCTCCAAAATCACCATCAAGAAAGGCGGAGCCGCCTCTTCCAAGGGTGGAGGAGGAGGAGGAGGAAGAAAAATCTCTCTCGAACAGGAAAAGCTCTATGACCAATGTCTAAATGCTCCTACGCCTTTGCGGTTCCTGAAGCCCAAAGACAGAGAACGCGAGGCCGAGCGGGAGAAGCTGGGGCTCATCAGCAAAGAGCGCCAACGCGAGATTGAGATGATGAAGATGGATAAATCGAAATTGGGCGTCTCTGATTCTCCATCGATCATTGGAACTATGGGATTGGATCTGATAACGCTAGGTGTGGTCGATGCAGATAAGATCCCGAAGTACGAATTGACTGTGGAAGATGGGCGGCGGCTTGCAAAGGAATACAGTCGGGTGTTGATGAGGCGGCACCGTGCAAGGCAGGCAGCTGAATCGACGCTGTTGCAGATGAAGAAAGATGCTATTGAAGCATTGCCAGAGCATTTGAAAGCTGCCGCATTGGTCCCAGATTTGACTCCGTTCCCAGCGAACCGATTCATGGCGACATTGACGCCTCCAATAGAAGGCTATATTGAAAAGATCAATGAAGCAGCGAAGAGGAGTAGCGGGAAAGAGAAGCTTAGATGA

mRNA sequence

ATGATCCGTTTCGCGAAGTTGAAATCTCTGGTGCCATCTGCAGATTCCGGCAGCTACCATTTGCTTCAAAGGTGCTGGGTGAGTGGTACTGCCAAAGGAAAATCAAAAATCAAAGCTGGGCAACAGCTGAAGCGCTCCAAAATCACCATCAAGAAAGGCGGAGCCGCCTCTTCCAAGGGTGGAGGAGGAGGAGGAGGAAGAAAAATCTCTCTCGAACAGGAAAAGCTCTATGACCAATGTCTAAATGCTCCTACGCCTTTGCGGTTCCTGAAGCCCAAAGACAGAGAACGCGAGGCCGAGCGGGAGAAGCTGGGGCTCATCAGCAAAGAGCGCCAACGCGAGATTGAGATGATGAAGATGGATAAATCGAAATTGGGCGTCTCTGATTCTCCATCGATCATTGGAACTATGGGATTGGATCTGATAACGCTAGGTGTGGTCGATGCAGATAAGATCCCGAAGTACGAATTGACTGTGGAAGATGGGCGGCGGCTTGCAAAGGAATACAGTCGGGTGTTGATGAGGCGGCACCGTGCAAGGCAGGCAGCTGAATCGACGCTGTTGCAGATGAAGAAAGATGCTATTGAAGCATTGCCAGAGCATTTGAAAGCTGCCGCATTGGTCCCAGATTTGACTCCGTTCCCAGCGAACCGATTCATGGCGACATTGACGCCTCCAATAGAAGGCTATATTGAAAAGATCAATGAAGCAGCGAAGAGGAGTAGCGGGAAAGAGAAGCTTAGATGA

Coding sequence (CDS)

ATGATCCGTTTCGCGAAGTTGAAATCTCTGGTGCCATCTGCAGATTCCGGCAGCTACCATTTGCTTCAAAGGTGCTGGGTGAGTGGTACTGCCAAAGGAAAATCAAAAATCAAAGCTGGGCAACAGCTGAAGCGCTCCAAAATCACCATCAAGAAAGGCGGAGCCGCCTCTTCCAAGGGTGGAGGAGGAGGAGGAGGAAGAAAAATCTCTCTCGAACAGGAAAAGCTCTATGACCAATGTCTAAATGCTCCTACGCCTTTGCGGTTCCTGAAGCCCAAAGACAGAGAACGCGAGGCCGAGCGGGAGAAGCTGGGGCTCATCAGCAAAGAGCGCCAACGCGAGATTGAGATGATGAAGATGGATAAATCGAAATTGGGCGTCTCTGATTCTCCATCGATCATTGGAACTATGGGATTGGATCTGATAACGCTAGGTGTGGTCGATGCAGATAAGATCCCGAAGTACGAATTGACTGTGGAAGATGGGCGGCGGCTTGCAAAGGAATACAGTCGGGTGTTGATGAGGCGGCACCGTGCAAGGCAGGCAGCTGAATCGACGCTGTTGCAGATGAAGAAAGATGCTATTGAAGCATTGCCAGAGCATTTGAAAGCTGCCGCATTGGTCCCAGATTTGACTCCGTTCCCAGCGAACCGATTCATGGCGACATTGACGCCTCCAATAGAAGGCTATATTGAAAAGATCAATGAAGCAGCGAAGAGGAGTAGCGGGAAAGAGAAGCTTAGATGA

Homology

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BLAST of CmoCh14G021510 vs. TrEMBL
Match: E5GCH1_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 3.3e-110
Identity = 215/248 (86.69%), Postives = 233/248 (93.95%), Query Frame = 1


Query: 1   MIRFAKLKSLVPSADSGSYHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIRF K KSL   ADS ++ LLQRCWVSGTAKGKSKIKAGQ LKRSKIT+KKGGAAS KG
Sbjct: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAAS-KG 60

Query: 61  GGGGGGRKISLEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMKM 120
           G  GGG+KIS E+EKLYDQCLNAPTPLRFLK K+REREAEREKLGL+SKERQREIEMMKM
Sbjct: 61  GDSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKM 120

Query: 121 DKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRAR 180
           DKSKLG+SDSPSIIGT GLDLI+LGVVDADKIPKYELTVEDGRRLAKEYSRVLMR+HRAR
Sbjct: 121 DKSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRAR 180

Query: 181 QAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKINEAAKR 240
           +AAESTLL+MKK+AIEALP+HLKAAALVPD+TPFPA+RFMATLTPPIEGY+EKI+EAAKR
Sbjct: 181 RAAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKR 240

Query: 241 SSGKEKLR 249
           SS KEKLR
Sbjct: 241 SSAKEKLR 247

[Close]

BLAST of CmoCh14G021510 vs. TrEMBL
Match: A0A0A0L3Z1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119830 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 9.1e-108
Identity = 208/248 (83.87%), Postives = 233/248 (93.95%), Query Frame = 1


Query: 1   MIRFAKLKSLVPSADSGSYHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIRF K KSL  SADSG++ LLQRCWVS TAKGKSKIKAGQ LKRSKIT+KKGGAAS KG
Sbjct: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAAS-KG 60

Query: 61  GGGGGGRKISLEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMKM 120
           G GGGG+KI  +QEKLYDQCLNAPTPLRFLK K+REREA+REKLGLISKERQREI+MMKM
Sbjct: 61  GDGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKM 120

Query: 121 DKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRAR 180
           DKSKLG+SDSPSIIGT GLDLI+LG+VDADKIPKYELTVEDG+RLAKEYSRVLM++HRAR
Sbjct: 121 DKSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRAR 180

Query: 181 QAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKINEAAKR 240
           +AAE+ LL+MK +AIEALP+HLKAAALVPD+TPFPA+RFMATLTPPIEGY+EKI+EAAK+
Sbjct: 181 RAAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKK 240

Query: 241 SSGKEKLR 249
           S+GKEKLR
Sbjct: 241 STGKEKLR 247

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BLAST of CmoCh14G021510 vs. TrEMBL
Match: A0A061DR18_THECC (Copper ion binding isoform 1 OS=Theobroma cacao GN=TCM_001357 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.4e-84
Identity = 171/231 (74.03%), Postives = 197/231 (85.28%), Query Frame = 1


Query: 19  YHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKGGGGGGGRKISLEQEKLYD 78
           + LLQRC VSGTAKGK+K+KAGQ LKRSK++ KKG   +        G +I  E+++LYD
Sbjct: 16  HRLLQRCTVSGTAKGKAKLKAGQSLKRSKVSTKKGKGGAPTDDSLPKGGRIPDEKQRLYD 75

Query: 79  QCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMKMDKSK-LGVSDSPSIIGTM 138
           QCLNAPTP+R L PK+R REAEREKLGLISKERQRE+E++K    K +GV D P I+GT 
Sbjct: 76  QCLNAPTPVRHLSPKERAREAEREKLGLISKERQREMEILKKGGRKAMGVPDDPMIMGTP 135

Query: 139 GLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEA 198
           GLDLITLG++DADKIPKYELTVEDGRRLAKEYSRVLMR+HRARQAAES LL+MKK+AIEA
Sbjct: 136 GLDLITLGLIDADKIPKYELTVEDGRRLAKEYSRVLMRKHRARQAAESNLLRMKKEAIEA 195

Query: 199 LPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKINEAAKRSSGKEKLR 249
           LPE LK AALVPDLTPFPANRFMATLTPPIEGYIEK+ EAA++SSGK+KLR
Sbjct: 196 LPEKLKEAALVPDLTPFPANRFMATLTPPIEGYIEKVKEAARKSSGKQKLR 246

[Close]

BLAST of CmoCh14G021510 vs. TrEMBL
Match: A0A061DII1_THECC (Copper ion binding isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_001357 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.4e-84
Identity = 171/231 (74.03%), Postives = 197/231 (85.28%), Query Frame = 1


Query: 19  YHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKGGGGGGGRKISLEQEKLYD 78
           + LLQRC VSGTAKGK+K+KAGQ LKRSK++ KKG   +        G +I  E+++LYD
Sbjct: 16  HRLLQRCTVSGTAKGKAKLKAGQSLKRSKVSTKKGKGGAPTDDSLPKGGRIPDEKQRLYD 75

Query: 79  QCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMKMDKSK-LGVSDSPSIIGTM 138
           QCLNAPTP+R L PK+R REAEREKLGLISKERQRE+E++K    K +GV D P I+GT 
Sbjct: 76  QCLNAPTPVRHLSPKERAREAEREKLGLISKERQREMEILKKGGRKAMGVPDDPMIMGTP 135

Query: 139 GLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEA 198
           GLDLITLG++DADKIPKYELTVEDGRRLAKEYSRVLMR+HRARQAAES LL+MKK+AIEA
Sbjct: 136 GLDLITLGLIDADKIPKYELTVEDGRRLAKEYSRVLMRKHRARQAAESNLLRMKKEAIEA 195

Query: 199 LPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKINEAAKRSSGKEKLR 249
           LPE LK AALVPDLTPFPANRFMATLTPPIEGYIEK+ EAA++SSGK+KLR
Sbjct: 196 LPEKLKEAALVPDLTPFPANRFMATLTPPIEGYIEKVKEAARKSSGKQKLR 246

[Close]

BLAST of CmoCh14G021510 vs. TrEMBL
Match: A0A0D2QFQ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G050300 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.7e-83
Identity = 175/249 (70.28%), Postives = 203/249 (81.53%), Query Frame = 1


Query: 1   MIRFAKLKSLVPSADSGSYHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIR AK    + +    ++  LQRC VSGTAKGKSK+KAGQ LKRSKI+ KKG   +S  
Sbjct: 1   MIRIAKNPKPLTTL---THQFLQRCTVSGTAKGKSKLKAGQPLKRSKISTKKGKGGASLD 60

Query: 61  GGGGGGRKISLEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMKM 120
                G +I  E++KLYDQCLNAPTP+R L PK+R REAEREKLGLISKERQRE+E++K 
Sbjct: 61  DSLPKGGRIPDEKQKLYDQCLNAPTPVRHLSPKERAREAEREKLGLISKERQREMEILKK 120

Query: 121 DKSK-LGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180
              K +GV D P I+GT GLDLITLG+VDADKIPKYELTVEDGRRLAKEYSRVLMR+HRA
Sbjct: 121 GGRKAMGVPDEPMIMGTPGLDLITLGLVDADKIPKYELTVEDGRRLAKEYSRVLMRKHRA 180

Query: 181 RQAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKINEAAK 240
           RQAAE+ LL+MKK+AIEALPE LK AA++PDLTPFPANR MA+LTPPIEGYIEK+ EAAK
Sbjct: 181 RQAAETNLLRMKKEAIEALPEKLKEAAMIPDLTPFPANRLMASLTPPIEGYIEKVKEAAK 240

Query: 241 RSSGKEKLR 249
           +SS K+KLR
Sbjct: 241 KSSTKQKLR 246

[Close]

BLAST of CmoCh14G021510 vs. TAIR10
Match: AT4G05400.1 (AT4G05400.1 copper ion binding)

HSP 1 Score: 289.7 bits (740), Expect = 1.8e-78
Identity = 159/258 (61.63%), Postives = 200/258 (77.52%), Query Frame = 1


Query: 1   MIRFAKLKSLVPSADSGSYHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIR  K K+++ S    SYHL+QRC  SGT KGK+K+K GQ LKR+K++IKKGG     G
Sbjct: 1   MIRVTKPKAIIESL---SYHLIQRCSASGTPKGKAKLKTGQPLKRNKLSIKKGG-----G 60

Query: 61  GGGG---------GGRKISLEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKER 120
           GGG          G  +IS E++KLY+QCLNAP P+R+L P++ EREA+REKLGLISKE+
Sbjct: 61  GGGAPVEGEEAVKGKGRISDEKQKLYEQCLNAPCPVRYLTPQEIEREAQREKLGLISKEK 120

Query: 121 QREIEMMKMD-KSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYS 180
           QR++E+ K    + +GV+D P  IGT GLD I+LG+ +A+++PKY+LT EDG RLAKEYS
Sbjct: 121 QRDMEIQKKGGAASMGVTDEPMRIGTPGLDYISLGIFEAEELPKYKLTEEDGERLAKEYS 180

Query: 181 RVLMRRHRARQAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGY 240
           +VLMR HR R+AAE+ LL +KK AIEALPE+LK AAL PDLTPFPANR MATLTPPIEGY
Sbjct: 181 KVLMREHRERRAAETALLNLKKSAIEALPENLKKAALEPDLTPFPANRGMATLTPPIEGY 240

Query: 241 IEKINEAAKRSSGKEKLR 249
           +EK+ +AAK+SS KEKLR
Sbjct: 241 LEKVMDAAKKSSSKEKLR 250

[Close]

BLAST of CmoCh14G021510 vs. TAIR10
Match: AT4G21140.1 (AT4G21140.1 BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G05400.2))

HSP 1 Score: 281.6 bits (719), Expect = 4.8e-76
Identity = 154/250 (61.60%), Postives = 196/250 (78.40%), Query Frame = 1


Query: 1   MIRFAKLKSLVPSADSGSYHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIRFA+ K ++   DS SY+LLQ+C+ SGT KGKSK+K GQ LKR+K+TIKKGG      
Sbjct: 1   MIRFARPKPII---DSVSYNLLQKCYASGTPKGKSKLKTGQSLKRNKLTIKKGGG----N 60

Query: 61  GGGGGGRKISLEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMKM 120
           GGG GG ++   + ++ DQC+NAP P+R+L+PK+REREA REKLGLISK RQ+EI+  K 
Sbjct: 61  GGGRGGDEVDKGKGRISDQCINAPCPVRYLRPKEREREARREKLGLISKARQKEIDFQKK 120

Query: 121 DKS-KLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180
             S  +GV+ +P  IGT GLD I+LG+   D++PKY++TVEDG RLAKEYSRVLMR HRA
Sbjct: 121 GGSFTMGVTTAPMRIGTPGLDYISLGIFTEDELPKYKVTVEDGIRLAKEYSRVLMREHRA 180

Query: 181 RQAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKI-NEAA 240
           R+ AE +L++M+  A+EALPE+LK AALV DLTPFP +R  ATLTPPIEGY+E+I N AA
Sbjct: 181 RRVAEISLMKMRNAAVEALPENLKKAALVRDLTPFPVSRGTATLTPPIEGYLERIMNAAA 240

Query: 241 KRSSGKEKLR 249
           ++SSGKEKLR
Sbjct: 241 RKSSGKEKLR 243

[Close]

BLAST of CmoCh14G021510 vs. NCBI nr
Match: gi|659075063|ref|XP_008437945.1| (PREDICTED: uncharacterized protein LOC103483214 [Cucumis melo])

HSP 1 Score: 406.0 bits (1042), Expect = 4.8e-110
Identity = 215/248 (86.69%), Postives = 233/248 (93.95%), Query Frame = 1


Query: 1   MIRFAKLKSLVPSADSGSYHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIRF K KSL   ADS ++ LLQRCWVSGTAKGKSKIKAGQ LKRSKIT+KKGGAAS KG
Sbjct: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAAS-KG 60

Query: 61  GGGGGGRKISLEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMKM 120
           G  GGG+KIS E+EKLYDQCLNAPTPLRFLK K+REREAEREKLGL+SKERQREIEMMKM
Sbjct: 61  GDSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKM 120

Query: 121 DKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRAR 180
           DKSKLG+SDSPSIIGT GLDLI+LGVVDADKIPKYELTVEDGRRLAKEYSRVLMR+HRAR
Sbjct: 121 DKSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRAR 180

Query: 181 QAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKINEAAKR 240
           +AAESTLL+MKK+AIEALP+HLKAAALVPD+TPFPA+RFMATLTPPIEGY+EKI+EAAKR
Sbjct: 181 RAAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKR 240

Query: 241 SSGKEKLR 249
           SS KEKLR
Sbjct: 241 SSAKEKLR 247

[Close]

BLAST of CmoCh14G021510 vs. NCBI nr
Match: gi|449432078|ref|XP_004133827.1| (PREDICTED: uncharacterized protein LOC101213243 [Cucumis sativus])

HSP 1 Score: 397.9 bits (1021), Expect = 1.3e-107
Identity = 208/248 (83.87%), Postives = 233/248 (93.95%), Query Frame = 1


Query: 1   MIRFAKLKSLVPSADSGSYHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIRF K KSL  SADSG++ LLQRCWVS TAKGKSKIKAGQ LKRSKIT+KKGGAAS KG
Sbjct: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAAS-KG 60

Query: 61  GGGGGGRKISLEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMKM 120
           G GGGG+KI  +QEKLYDQCLNAPTPLRFLK K+REREA+REKLGLISKERQREI+MMKM
Sbjct: 61  GDGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKM 120

Query: 121 DKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRAR 180
           DKSKLG+SDSPSIIGT GLDLI+LG+VDADKIPKYELTVEDG+RLAKEYSRVLM++HRAR
Sbjct: 121 DKSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRAR 180

Query: 181 QAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKINEAAKR 240
           +AAE+ LL+MK +AIEALP+HLKAAALVPD+TPFPA+RFMATLTPPIEGY+EKI+EAAK+
Sbjct: 181 RAAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKK 240

Query: 241 SSGKEKLR 249
           S+GKEKLR
Sbjct: 241 STGKEKLR 247

[Close]

BLAST of CmoCh14G021510 vs. NCBI nr
Match: gi|1009117551|ref|XP_015875379.1| (PREDICTED: uncharacterized protein LOC107412181 [Ziziphus jujuba])

HSP 1 Score: 350.9 bits (899), Expect = 1.8e-93
Identity = 189/249 (75.90%), Postives = 213/249 (85.54%), Query Frame = 1


Query: 1   MIRFAKLKSLVPSADSGSYHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKG-GAASSK 60
           MIR  KLK L  S +S S+ LLQRC VSGTAKGK K+KA Q LKRSK+T KKG G A +K
Sbjct: 1   MIRILKLKPLSLSIESSSHQLLQRCSVSGTAKGKGKLKAAQPLKRSKVTTKKGAGDAPAK 60

Query: 61  GGGGGGGRKISLEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMK 120
           GGG G   K  LE  K YDQCLNAPTP+R+L PK REREA+REKLGLISK+RQRE++M+K
Sbjct: 61  GGGKGHSEKERLE--KFYDQCLNAPTPIRYLTPKQREREAQREKLGLISKDRQRELDMLK 120

Query: 121 MDKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180
            +K K G+S++P+IIGT GLDLI+LG+VD   IPKYELTVEDGRRLAKEYSRVLMRRHRA
Sbjct: 121 KNKGKKGISETPTIIGTPGLDLISLGLVDEKDIPKYELTVEDGRRLAKEYSRVLMRRHRA 180

Query: 181 RQAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKINEAAK 240
           RQAAES LL++KK+AIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEK+ EAA+
Sbjct: 181 RQAAESNLLRLKKEAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKVKEAAR 240

Query: 241 RSSGKEKLR 249
           RSSGKEKLR
Sbjct: 241 RSSGKEKLR 247

[Close]

BLAST of CmoCh14G021510 vs. NCBI nr
Match: gi|645222617|ref|XP_008218246.1| (PREDICTED: uncharacterized protein LOC103318621 [Prunus mume])

HSP 1 Score: 332.8 bits (852), Expect = 5.1e-88
Identity = 181/251 (72.11%), Postives = 208/251 (82.87%), Query Frame = 1


Query: 1   MIRFAKLKSLVPSADS-GSYHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSK 60
           MIR  K K L P  +S  SY+ LQRC VSGTAKGKSK K    LKRSKIT+K+G A  + 
Sbjct: 1   MIRIFKNKPLRPLNESPSSYNFLQRCSVSGTAKGKSKTKTALPLKRSKITVKRGTAEPAS 60

Query: 61  GGGGGGGRKISLEQ--EKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEM 120
            GGGGGG+  S     EK YDQCLNAPTP+R+L P+ RERE +R KLGLISKERQREIEM
Sbjct: 61  KGGGGGGKGQSHRDRVEKFYDQCLNAPTPVRWLTPEQREREIQRAKLGLISKERQREIEM 120

Query: 121 MKMDKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRH 180
           +K+ K KLG+ + P+I+GT GLDLI+LG+VDA+K+PKY LTVEDGRRLAKEYSRVLMRRH
Sbjct: 121 LKIGKEKLGIPEKPTILGTPGLDLISLGLVDAEKLPKYNLTVEDGRRLAKEYSRVLMRRH 180

Query: 181 RARQAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKINEA 240
           RARQAAESTLL++KK+AIEALPEHLKAAALVPDL+ FPANRFMATLTPPIEGYIEK+ EA
Sbjct: 181 RARQAAESTLLRLKKEAIEALPEHLKAAALVPDLSKFPANRFMATLTPPIEGYIEKVKEA 240

Query: 241 AKRSSGKEKLR 249
           A++SS K KLR
Sbjct: 241 ARKSSEKGKLR 251

[Close]

BLAST of CmoCh14G021510 vs. NCBI nr
Match: gi|657958338|ref|XP_008370690.1| (PREDICTED: uncharacterized protein LOC103434156 [Malus domestica])

HSP 1 Score: 329.3 bits (843), Expect = 5.7e-87
Identity = 181/249 (72.69%), Postives = 205/249 (82.33%), Query Frame = 1


Query: 1   MIRFAKLKSLVPSADSGSYH-LLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSK 60
           MIR  K+K +    +S S H  LQRC VSGTAKGKSK KA   LKRSKIT+K+G AA + 
Sbjct: 1   MIRILKIKPVTSFXESSSSHNFLQRCSVSGTAKGKSKTKAAGPLKRSKITVKRGSAAPAA 60

Query: 61  GGGGGGGRKISLEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMK 120
            GGGG    IS   EKLYD CLNAPTP+R+L P  R+RE  REK+GLISKERQREIEM+K
Sbjct: 61  KGGGG---HIS-PAEKLYDSCLNAPTPVRWLPPVLRKREIMREKMGLISKERQREIEMLK 120

Query: 121 MDKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180
            DK KLG+ + P+IIGT GLDLI+LG+VD +KIPKY LTVEDGR+LAKEYSRVLMR HRA
Sbjct: 121 KDKGKLGIPEKPTIIGTPGLDLISLGLVDVEKIPKYNLTVEDGRKLAKEYSRVLMRXHRA 180

Query: 181 RQAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKINEAAK 240
           RQAAESTLL++KK+AIEALPEHLKAAALVPDLTPFP NRFMATLTPPIEGYIEK+ EAA+
Sbjct: 181 RQAAESTLLRLKKEAIEALPEHLKAAALVPDLTPFPVNRFMATLTPPIEGYIEKVKEAAR 240

Query: 241 RSSGKEKLR 249
           +SS KEKLR
Sbjct: 241 KSSAKEKLR 245

The following BLAST results are available for this feature:

BLAST of CmoCh14G021510 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh14G021510 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GCH1_CUCME	3.3e-110	86.69	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0L3Z1_CUCSA	9.1e-108	83.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119830 PE=4 SV=1	[more]
A0A061DR18_THECC	1.4e-84	74.03	Copper ion binding isoform 1 OS=Theobroma cacao GN=TCM_001357 PE=4 SV=1	[more]
A0A061DII1_THECC	1.4e-84	74.03	Copper ion binding isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_001357 PE=4 SV...	[more]
A0A0D2QFQ8_GOSRA	2.7e-83	70.28	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G050300 PE=4 SV=1	[more]

BLAST of CmoCh14G021510 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G05400.1	1.8e-78	61.63	copper ion binding	[more]
AT4G21140.1	4.8e-76	61.60	BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR...	[more]

BLAST of CmoCh14G021510 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075063\|ref\|XP_008437945.1\|	4.8e-110	86.69	PREDICTED: uncharacterized protein LOC103483214 [Cucumis melo]	[more]
gi\|449432078\|ref\|XP_004133827.1\|	1.3e-107	83.87	PREDICTED: uncharacterized protein LOC101213243 [Cucumis sativus]	[more]
gi\|1009117551\|ref\|XP_015875379.1\|	1.8e-93	75.90	PREDICTED: uncharacterized protein LOC107412181 [Ziziphus jujuba]	[more]
gi\|645222617\|ref\|XP_008218246.1\|	5.1e-88	72.11	PREDICTED: uncharacterized protein LOC103318621 [Prunus mume]	[more]
gi\|657958338\|ref\|XP_008370690.1\|	5.7e-87	72.69	PREDICTED: uncharacterized protein LOC103434156 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G021510.1	CmoCh14G021510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR13359	39S RIBOSOMAL PROTEIN L40, MITOCHONDRIAL	coord: 1..248 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh14G021510	Cucsa.258960	Cucumber (Gy14) v1	cgycmoB0700
CmoCh14G021510	Cla021182	Watermelon (97103) v1	cmowmB231
CmoCh14G021510	Csa3G119830	Cucumber (Chinese Long) v2	cmocuB239
CmoCh14G021510	MELO3C006052	Melon (DHL92) v3.5.1	cmomeB230
CmoCh14G021510	CSPI03G08190	Wild cucumber (PI 183967)	cmocpiB243
CmoCh14G021510	Cp4.1LG03g16410	Cucurbita pepo (Zucchini)	cmocpeB245
CmoCh14G021510	MELO3C006052.2	Melon (DHL92) v3.6.1	cmomedB260
CmoCh14G021510	CsaV3_3G008340	Cucumber (Chinese Long) v3	cmocucB0283
CmoCh14G021510	Cla97C05G081280	Watermelon (97103) v2	cmowmbB243
CmoCh14G021510	Bhi01G000320	Wax gourd	cmowgoB0303
CmoCh14G021510	CsGy3G008330	Cucumber (Gy14) v2	cgybcmoB290
CmoCh14G021510	Carg20955	Silver-seed gourd	carcmoB0664

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh14G021510	Cucurbita pepo (Zucchini)	cmocpeB254
CmoCh14G021510	Bottle gourd (USVL1VR-Ls)	cmolsiB214
CmoCh14G021510	Bottle gourd (USVL1VR-Ls)	cmolsiB233
CmoCh14G021510	Cucumber (Gy14) v2	cgybcmoB568
CmoCh14G021510	Melon (DHL92) v3.6.1	cmomedB219
CmoCh14G021510	Silver-seed gourd	carcmoB1330
CmoCh14G021510	Cucumber (Chinese Long) v3	cmocucB0296
CmoCh14G021510	Watermelon (97103) v2	cmowmbB227
CmoCh14G021510	Watermelon (97103) v2	cmowmbB242
CmoCh14G021510	Wax gourd	cmowgoB0297
CmoCh14G021510	Cucurbita moschata (Rifu)	cmocmoB193
CmoCh14G021510	Cucurbita moschata (Rifu)	cmocmoB194
CmoCh14G021510	Cucurbita moschata (Rifu)	cmocmoB201
CmoCh14G021510	Cucurbita moschata (Rifu)	cmocmoB212
CmoCh14G021510	Cucurbita moschata (Rifu)	cmocmoB224
CmoCh14G021510	Cucumber (Gy14) v1	cgycmoB0597
CmoCh14G021510	Cucurbita maxima (Rimu)	cmacmoB245
CmoCh14G021510	Cucurbita maxima (Rimu)	cmacmoB793
CmoCh14G021510	Cucurbita maxima (Rimu)	cmacmoB799
CmoCh14G021510	Cucurbita maxima (Rimu)	cmacmoB882
CmoCh14G021510	Wild cucumber (PI 183967)	cmocpiB257
CmoCh14G021510	Cucumber (Chinese Long) v2	cmocuB251
CmoCh14G021510	Melon (DHL92) v3.5.1	cmomeB198
CmoCh14G021510	Watermelon (Charleston Gray)	cmowcgB216
CmoCh14G021510	Watermelon (Charleston Gray)	cmowcgB219
CmoCh14G021510	Watermelon (97103) v1	cmowmB228
CmoCh14G021510	Watermelon (97103) v1	cmowmB234