Cla97C05G081280 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G081280
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Copper ion-binding protein
Location	Cla97Chr05 : 1065824 .. 1066564 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCCGTTTCACGAAATTCAAATCTCTGGCCCTATCTGCAGATTCCGGTGGCCACCAATTGCTCCAAAGATGCTGGGTGAGTGGTACTGCCAAAGGCAAATCGAAGATCAAAGCTGGCCAACAGCTGAAGCGCTCCAAAATCACCGTCAAGAAAGGCGGAAACGCTTCCAAAGGTGGTGGTGGAGGAGGAAGGAGAATCTCTCCCGAACAGGAAAAGCTCTATGACCAATGCCTAAATGCTCCTACGCCTCTGCGGTTCTTGAAACCTAAAGACAGAGAACGCGAGGCCGAGCGGGAGAAGCTCGGGCTCATCAGCAAAGAGCGCCAACGCGAGATTGAGATGATGAAGATGGATAAATCGAAATTGGGGGTCTCTGATTCCCCGTCGATCATTGGAACTATGGGTTTGGATTTGATATCGCTAGGTGTGGTCGATGCGGATAAGATTCCGAAGTACGAGTTGACAGAAGAAGATGGGCGGCGGCTCGCGAAGGAATACAGTCGGGTGTTGATGAGGCGGCATCGTGCTAGGCAGGCAGCTGAATCGACGCTGTTGCAGATGAAGAAGGAGGCTATTGAAGCATTACCAGAGCATTTGAAAGCTGCTGCTTTGGTCCCAGATTTGACAAAGTTTCCCCCGAACCGTTTCATGGCGACTTTGACGCCTCCAATAGAAGGCTATATTGAAAAGGTCAAGGAAGCAGCGAGGAGGAGTAGCGGGAAAGAGAAGCTTAGATGA

mRNA sequence

ATGATCCGTTTCACGAAATTCAAATCTCTGGCCCTATCTGCAGATTCCGGTGGCCACCAATTGCTCCAAAGATGCTGGGTGAGTGGTACTGCCAAAGGCAAATCGAAGATCAAAGCTGGCCAACAGCTGAAGCGCTCCAAAATCACCGTCAAGAAAGGCGGAAACGCTTCCAAAGGTGGTGGTGGAGGAGGAAGGAGAATCTCTCCCGAACAGGAAAAGCTCTATGACCAATGCCTAAATGCTCCTACGCCTCTGCGGTTCTTGAAACCTAAAGACAGAGAACGCGAGGCCGAGCGGGAGAAGCTCGGGCTCATCAGCAAAGAGCGCCAACGCGAGATTGAGATGATGAAGATGGATAAATCGAAATTGGGGGTCTCTGATTCCCCGTCGATCATTGGAACTATGGGTTTGGATTTGATATCGCTAGGTGTGGTCGATGCGGATAAGATTCCGAAGTACGAGTTGACAGAAGAAGATGGGCGGCGGCTCGCGAAGGAATACAGTCGGGTGTTGATGAGGCGGCATCGTGCTAGGCAGGCAGCTGAATCGACGCTGTTGCAGATGAAGAAGGAGGCTATTGAAGCATTACCAGAGCATTTGAAAGCTGCTGCTTTGGTCCCAGATTTGACAAAGTTTCCCCCGAACCGTTTCATGGCGACTTTGACGCCTCCAATAGAAGGCTATATTGAAAAGGTCAAGGAAGCAGCGAGGAGGAGTAGCGGGAAAGAGAAGCTTAGATGA

Coding sequence (CDS)

ATGATCCGTTTCACGAAATTCAAATCTCTGGCCCTATCTGCAGATTCCGGTGGCCACCAATTGCTCCAAAGATGCTGGGTGAGTGGTACTGCCAAAGGCAAATCGAAGATCAAAGCTGGCCAACAGCTGAAGCGCTCCAAAATCACCGTCAAGAAAGGCGGAAACGCTTCCAAAGGTGGTGGTGGAGGAGGAAGGAGAATCTCTCCCGAACAGGAAAAGCTCTATGACCAATGCCTAAATGCTCCTACGCCTCTGCGGTTCTTGAAACCTAAAGACAGAGAACGCGAGGCCGAGCGGGAGAAGCTCGGGCTCATCAGCAAAGAGCGCCAACGCGAGATTGAGATGATGAAGATGGATAAATCGAAATTGGGGGTCTCTGATTCCCCGTCGATCATTGGAACTATGGGTTTGGATTTGATATCGCTAGGTGTGGTCGATGCGGATAAGATTCCGAAGTACGAGTTGACAGAAGAAGATGGGCGGCGGCTCGCGAAGGAATACAGTCGGGTGTTGATGAGGCGGCATCGTGCTAGGCAGGCAGCTGAATCGACGCTGTTGCAGATGAAGAAGGAGGCTATTGAAGCATTACCAGAGCATTTGAAAGCTGCTGCTTTGGTCCCAGATTTGACAAAGTTTCCCCCGAACCGTTTCATGGCGACTTTGACGCCTCCAATAGAAGGCTATATTGAAAAGGTCAAGGAAGCAGCGAGGAGGAGTAGCGGGAAAGAGAAGCTTAGATGA

Protein sequence

MIRFTKFKSLALSADSGGHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITVKKGGNASKGGGGGGRRISPEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMKMDKSKLGVSDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKEAIEALPEHLKAAALVPDLTKFPPNRFMATLTPPIEGYIEKVKEAARRSSGKEKLR

Homology

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BLAST of Cla97C05G081280 vs. NCBI nr
Match: XP_022980123.1 (uncharacterized protein LOC111479606 [Cucurbita maxima])

HSP 1 Score: 339.0 bits (868), Expect = 1.4e-89
Identity = 231/248 (93.15%), Postives = 235/248 (94.76%), Query Frame = 0


Query: 1   MIRFTKFKSLALSADSGGHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITVK--XXXXXXX 60
           MIRF K KSL  SADSG H LLQRCWVSGTAKGKSKIKAGQQLKRSKIT+K  XXXXXXX
Sbjct: 1   MIRFAKLKSLVPSADSGSHHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKXXXXXXXXX 60

Query: 61  XXXXXXXXXSPEQEKLYDQCLNAPTPLRFLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXX SPEQEKLYDQCLNAPTPLRFLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXISPEQEKLYDQCLNAPTPLRFLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XKSKLGVSDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRAR 180
           XKSKLGVSDSPSIIGTMGLDLI+LGVVDADKIPKYELT EDGRRLAKEYSRVLMRRHRAR
Sbjct: 121 XKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRAR 180

Query: 181 QAAESTLLQMKKEAIEALPEHLKAAALVPDLTKFPPNRFMATLTPPIEGYIEKVKEAARR 240
           QAAESTLLQMKK+AIEALPEHLKAAALVPDLT FP NRFMATLTPPIEGYIEKVKEAA+ 
Sbjct: 181 QAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKVKEAAKS 240

Query: 241 SSGKEKLR 247
           SSGKEKLR
Sbjct: 241 SSGKEKLR 248

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BLAST of Cla97C05G081280 vs. NCBI nr
Match: XP_022924790.1 (uncharacterized protein LOC111432182 [Cucurbita moschata])

HSP 1 Score: 332.8 bits (852), Expect = 9.9e-88
Identity = 228/248 (91.94%), Postives = 234/248 (94.35%), Query Frame = 0


Query: 1   MIRFTKFKSLALSADSGGHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITVK--XXXXXXX 60
           MIRF K KSL  SADSG + LLQRCWVSGTAKGKSKIKAGQQLKRSKIT+K  XXXXXXX
Sbjct: 1   MIRFAKLKSLVPSADSGSYHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKXXXXXXXXX 60

Query: 61  XXXXXXXXXSPEQEKLYDQCLNAPTPLRFLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXX S EQEKLYDQCLNAPTPLRFLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXISLEQEKLYDQCLNAPTPLRFLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XKSKLGVSDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRAR 180
           XKSKLGVSDSPSIIGTMGLDLI+LGVVDADKIPKYELT EDGRRLAKEYSRVLMRRHRAR
Sbjct: 121 XKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRAR 180

Query: 181 QAAESTLLQMKKEAIEALPEHLKAAALVPDLTKFPPNRFMATLTPPIEGYIEKVKEAARR 240
           QAAESTLLQMKK+AIEALPEHLKAAALVPDLT FP NRFMATLTPPIEGYIEK+ EAA+R
Sbjct: 181 QAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKINEAAKR 240

Query: 241 SSGKEKLR 247
           SSGKEKLR
Sbjct: 241 SSGKEKLR 248

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BLAST of Cla97C05G081280 vs. NCBI nr
Match: XP_023527048.1 (uncharacterized protein LOC111790399 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.0 bits (850), Expect = 1.7e-87
Identity = 227/248 (91.53%), Postives = 233/248 (93.95%), Query Frame = 0


Query: 1   MIRFTKFKSLALSADSGGHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITVK--XXXXXXX 60
           MIRF K KSL  SADSG H LLQRCWVSGTAKGKSKIKAGQQLKRSKIT+K  XXXXXXX
Sbjct: 1   MIRFAKLKSLVPSADSGSHHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKXXXXXXXXX 60

Query: 61  XXXXXXXXXSPEQEKLYDQCLNAPTPLRFLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXX S EQEKLYDQCLNAPTPLRFLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXISLEQEKLYDQCLNAPTPLRFLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XKSKLGVSDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRAR 180
           XKSKLGVSDSPSIIGTMGLDLI+LGVVDADKIPKYELT EDGRRLAKEYSRVLMRRHRAR
Sbjct: 121 XKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRAR 180

Query: 181 QAAESTLLQMKKEAIEALPEHLKAAALVPDLTKFPPNRFMATLTPPIEGYIEKVKEAARR 240
           QAAESTLL+MKK+AIEALPEHLKAAALVPDLT FP NRFMATLTPPIEGYIEK+ E A+R
Sbjct: 181 QAAESTLLRMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKINEVAKR 240

Query: 241 SSGKEKLR 247
           SSGKEKLR
Sbjct: 241 SSGKEKLR 248

[Close]

BLAST of Cla97C05G081280 vs. NCBI nr
Match: XP_022147522.1 (uncharacterized protein LOC111016425 [Momordica charantia])

HSP 1 Score: 329.7 bits (844), Expect = 8.4e-87
Identity = 221/246 (89.84%), Postives = 230/246 (93.50%), Query Frame = 0


Query: 1   MIRFTKFKSLALSADSGGHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITVKXXXXXXXXX 60
           MIR TK KS+A  ADSG HQL+QRCWVSGTAKGK+KIK GQQLKRSKIT+K XXXXXXXX
Sbjct: 1   MIRLTKLKSVAEFADSGRHQLIQRCWVSGTAKGKAKIKGGQQLKRSKITIK-XXXXXXXX 60

Query: 61  XXXXXXXSPEQEKLYDQCLNAPTPLRFLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 120
           XXXXXXX    EKLYDQCLNAPTPLRFLKP  XXXXXXXXXXXXXXXXXXXXXXXXXX K
Sbjct: 61  XXXXXXXXXXXEKLYDQCLNAPTPLRFLKPKDXXXXXXXXXXXXXXXXXXXXXXXXXXDK 120

Query: 121 SKLGVSDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQA 180
           SKLG+SDSPSI+GT+GLDLISLGVVDADKIPKYELT EDGRRLAKEYSRVLMRRHRARQA
Sbjct: 121 SKLGISDSPSILGTVGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRARQA 180

Query: 181 AESTLLQMKKEAIEALPEHLKAAALVPDLTKFPPNRFMATLTPPIEGYIEKVKEAARRSS 240
           AESTLLQMKK+AIEALPEHLKAAA+VPDLT FPPNRFMATLTPPIEGYIEKVKEAARRSS
Sbjct: 181 AESTLLQMKKDAIEALPEHLKAAAMVPDLTPFPPNRFMATLTPPIEGYIEKVKEAARRSS 240

Query: 241 GKEKLR 247
           GKEKLR
Sbjct: 241 GKEKLR 245

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BLAST of Cla97C05G081280 vs. NCBI nr
Match: XP_008437945.1 (PREDICTED: uncharacterized protein LOC103483214 [Cucumis melo] >ADN34170.1 hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 309.7 bits (792), Expect = 9.0e-81
Identity = 217/247 (87.85%), Postives = 228/247 (92.31%), Query Frame = 0


Query: 1   MIRFTKFKSLALSADSGGHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITVK-XXXXXXXX 60
           MIRFTKFKSL+L ADS  HQLLQRCWVSGTAKGKSKIKAGQ LKRSKITVK XXXXXXXX
Sbjct: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKXXXXXXXXX 60

Query: 61  XXXXXXXXSPEQEKLYDQCLNAPTPLRFLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXX    EKLYDQCLNAPTPLRFLK XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXEKLYDQCLNAPTPLRFLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 KSKLGVSDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQ 180
              LG+SDSPSIIGT GLDLISLGVVDADKIPKYELT EDGRRLAKEYSRVLMR+HRAR+
Sbjct: 121 XXXLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR 180

Query: 181 AAESTLLQMKKEAIEALPEHLKAAALVPDLTKFPPNRFMATLTPPIEGYIEKVKEAARRS 240
           AAESTLL+MKKEAIEALP+HLKAAALVPD+T FP +RFMATLTPPIEGY+EK+ EAA+RS
Sbjct: 181 AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS 240

Query: 241 SGKEKLR 247
           S KEKLR
Sbjct: 241 SAKEKLR 247

[Close]

BLAST of Cla97C05G081280 vs. TrEMBL
Match: tr|A0A1S3AVT5|A0A1S3AVT5_CUCME (uncharacterized protein LOC103483214 OS=Cucumis melo OX=3656 GN=LOC103483214 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 5.9e-81
Identity = 217/247 (87.85%), Postives = 228/247 (92.31%), Query Frame = 0


Query: 1   MIRFTKFKSLALSADSGGHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITVK-XXXXXXXX 60
           MIRFTKFKSL+L ADS  HQLLQRCWVSGTAKGKSKIKAGQ LKRSKITVK XXXXXXXX
Sbjct: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKXXXXXXXXX 60

Query: 61  XXXXXXXXSPEQEKLYDQCLNAPTPLRFLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXX    EKLYDQCLNAPTPLRFLK XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXEKLYDQCLNAPTPLRFLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 KSKLGVSDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQ 180
              LG+SDSPSIIGT GLDLISLGVVDADKIPKYELT EDGRRLAKEYSRVLMR+HRAR+
Sbjct: 121 XXXLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR 180

Query: 181 AAESTLLQMKKEAIEALPEHLKAAALVPDLTKFPPNRFMATLTPPIEGYIEKVKEAARRS 240
           AAESTLL+MKKEAIEALP+HLKAAALVPD+T FP +RFMATLTPPIEGY+EK+ EAA+RS
Sbjct: 181 AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS 240

Query: 241 SGKEKLR 247
           S KEKLR
Sbjct: 241 SAKEKLR 247

[Close]

BLAST of Cla97C05G081280 vs. TrEMBL
Match: tr|E5GCH1|E5GCH1_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 5.9e-81
Identity = 217/247 (87.85%), Postives = 228/247 (92.31%), Query Frame = 0


Query: 1   MIRFTKFKSLALSADSGGHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITVK-XXXXXXXX 60
           MIRFTKFKSL+L ADS  HQLLQRCWVSGTAKGKSKIKAGQ LKRSKITVK XXXXXXXX
Sbjct: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKXXXXXXXXX 60

Query: 61  XXXXXXXXSPEQEKLYDQCLNAPTPLRFLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXX    EKLYDQCLNAPTPLRFLK XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXEKLYDQCLNAPTPLRFLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 KSKLGVSDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQ 180
              LG+SDSPSIIGT GLDLISLGVVDADKIPKYELT EDGRRLAKEYSRVLMR+HRAR+
Sbjct: 121 XXXLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR 180

Query: 181 AAESTLLQMKKEAIEALPEHLKAAALVPDLTKFPPNRFMATLTPPIEGYIEKVKEAARRS 240
           AAESTLL+MKKEAIEALP+HLKAAALVPD+T FP +RFMATLTPPIEGY+EK+ EAA+RS
Sbjct: 181 AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS 240

Query: 241 SGKEKLR 247
           S KEKLR
Sbjct: 241 SAKEKLR 247

[Close]

BLAST of Cla97C05G081280 vs. TrEMBL
Match: tr|A0A0A0L3Z1|A0A0A0L3Z1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119830 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 7.8e-81
Identity = 185/247 (74.90%), Postives = 202/247 (81.78%), Query Frame = 0


Query: 1   MIRFTKFKSLALSADSGGHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITVK-XXXXXXXX 60
           MIRFTKFKSL+LSADSG HQLLQRCWVS TAKGKSKIKAGQ LKRSKITVK XXXXXXXX
Sbjct: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKXXXXXXXXX 60

Query: 61  XXXXXXXXSPEQEKLYDQCLNAPTPLRFLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXX    EKLYDQCLNAPTPLRFLK                              
Sbjct: 61  XXXXXXXXXXXXEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKMD 120

Query: 121 KSKLGVSDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQ 180
           KSKLG+SDSPSIIGT GLDLISLG+VDADKIPKYELT EDG+RLAKEYSRVLM++HRAR+
Sbjct: 121 KSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRARR 180

Query: 181 AAESTLLQMKKEAIEALPEHLKAAALVPDLTKFPPNRFMATLTPPIEGYIEKVKEAARRS 240
           AAE+ LL+MK EAIEALP+HLKAAALVPD+T FP +RFMATLTPPIEGY+EK+ EAA++S
Sbjct: 181 AAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKKS 240

Query: 241 SGKEKLR 247
           +GKEKLR
Sbjct: 241 TGKEKLR 247

[Close]

BLAST of Cla97C05G081280 vs. TrEMBL
Match: tr|A0A2P5DKQ2|A0A2P5DKQ2_PARAD (Copper ion binding protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_054160 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 7.8e-73
Identity = 155/246 (63.01%), Postives = 171/246 (69.51%), Query Frame = 0


Query: 1   MIRFTKFKSLALSADSGGHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITVKXXXXXXXXX 60
           MIR  K K L+ S +S  HQLLQRC VSGTAKGK K+K  Q LKRSK+T K         
Sbjct: 1   MIRILKLKPLSSSIESLSHQLLQRCSVSGTAKGKGKLKGAQPLKRSKVTTKKGAVDAVPK 60

Query: 61  XXXXXXXSPEQEKLYDQCLNAPTPLRFLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 120
                      EK YDQCLNAPTP+R+L P                             K
Sbjct: 61  GGGKGSERDRLEKFYDQCLNAPTPVRYLTPKQREREAEREKLGLISKDRQREIEMMKKDK 120

Query: 121 SKLGVSDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQA 180
            K+G+S+ P+IIGT GLDLISLG+VD ++IPKYELT EDGRRLAKEYSRVLMRRHRARQA
Sbjct: 121 GKMGISEKPTIIGTPGLDLISLGLVDENEIPKYELTVEDGRRLAKEYSRVLMRRHRARQA 180

Query: 181 AESTLLQMKKEAIEALPEHLKAAALVPDLTKFPPNRFMATLTPPIEGYIEKVKEAARRSS 240
           AES LL+MKKEAIEALPEHLKAAA+VPDLT FP NRFMATLTPPIEGYI+KVKEAA RS 
Sbjct: 181 AESNLLRMKKEAIEALPEHLKAAAMVPDLTPFPVNRFMATLTPPIEGYIDKVKEAATRSI 240

Query: 241 GKEKLR 247
           GKEKLR
Sbjct: 241 GKEKLR 246

[Close]

BLAST of Cla97C05G081280 vs. TrEMBL
Match: tr|A0A2P5ENJ7|A0A2P5ENJ7_9ROSA (Copper ion binding protein OS=Trema orientalis OX=63057 GN=TorRG33x02_170730 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.7e-72
Identity = 154/246 (62.60%), Postives = 171/246 (69.51%), Query Frame = 0


Query: 1   MIRFTKFKSLALSADSGGHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITVKXXXXXXXXX 60
           MIR  K K L+ S +S  HQLLQRC VSGTAKGK K+K  Q LKRSK+T K         
Sbjct: 1   MIRILKLKPLSSSIESLSHQLLQRCSVSGTAKGKGKLKGAQPLKRSKVTTKKGAVDAVPK 60

Query: 61  XXXXXXXSPEQEKLYDQCLNAPTPLRFLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 120
                      EK YDQCLNAPTP+R+L P                             K
Sbjct: 61  SGGKGSERDRLEKFYDQCLNAPTPVRYLTPKQREREAEREKLGLISKDRQREIEMMKKDK 120

Query: 121 SKLGVSDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQA 180
            K+G+S+ P+IIGT GLDLISLG+VD ++IPKYELT EDGRRLAKEYSRVLMRRHRARQ+
Sbjct: 121 GKMGISEKPTIIGTPGLDLISLGLVDENEIPKYELTVEDGRRLAKEYSRVLMRRHRARQS 180

Query: 181 AESTLLQMKKEAIEALPEHLKAAALVPDLTKFPPNRFMATLTPPIEGYIEKVKEAARRSS 240
           AES LL+MKKEAIEALPEHLKAAA+VPDLT FP NRFMATLTPPIEGYI+KVKEAA RS 
Sbjct: 181 AESNLLRMKKEAIEALPEHLKAAAMVPDLTPFPVNRFMATLTPPIEGYIDKVKEAATRSI 240

Query: 241 GKEKLR 247
           GKEKLR
Sbjct: 241 GKEKLR 246

[Close]

BLAST of Cla97C05G081280 vs. TAIR10
Match: AT4G05400.1 (copper ion binding)

HSP 1 Score: 225.3 bits (573), Expect = 4.0e-59
Identity = 131/253 (51.78%), Postives = 165/253 (65.22%), Query Frame = 0


Query: 1   MIRFTKFKSLALSADSGGHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITVK------XXX 60
           MIR TK K++    +S  + L+QRC  SGT KGK+K+K GQ LKR+K+++K      XX 
Sbjct: 1   MIRVTKPKAI---IESLSYHLIQRCSASGTPKGKAKLKTGQPLKRNKLSIKKXXXXXXXP 60

Query: 61  XXXXXXXXXXXXXSPEQEKLYDQCLNAPTPLRFLKP-XXXXXXXXXXXXXXXXXXXXXXX 120
                        S E++KLY+QCLNAP P+R+L P                        
Sbjct: 61  VEGEEAVKGKGRISDEKQKLYEQCLNAPCPVRYLTPQEIEREAQREKLGLISKEKQRDME 120

Query: 121 XXXXXXKSKLGVSDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMR 180
                  + +GV+D P  IGT GLD ISLG+ +A+++PKY+LTEEDG RLAKEYS+VLMR
Sbjct: 121 IQKKGGAASMGVTDEPMRIGTPGLDYISLGIFEAEELPKYKLTEEDGERLAKEYSKVLMR 180

Query: 181 RHRARQAAESTLLQMKKEAIEALPEHLKAAALVPDLTKFPPNRFMATLTPPIEGYIEKVK 240
            HR R+AAE+ LL +KK AIEALPE+LK AAL PDLT FP NR MATLTPPIEGY+EKV 
Sbjct: 181 EHRERRAAETALLNLKKSAIEALPENLKKAALEPDLTPFPANRGMATLTPPIEGYLEKVM 240

Query: 241 EAARRSSGKEKLR 247
           +AA++SS KEKLR
Sbjct: 241 DAAKKSSSKEKLR 250

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BLAST of Cla97C05G081280 vs. TAIR10
Match: AT4G21140.1 (BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G05400.2))

HSP 1 Score: 204.1 bits (518), Expect = 9.6e-53
Identity = 127/248 (51.21%), Postives = 163/248 (65.73%), Query Frame = 0


Query: 1   MIRFTKFKSLALSADSGGHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITVKXXXXXXXXX 60
           MIRF + K +    DS  + LLQ+C+ SGT KGKSK+K GQ LKR+K+T+K    XXXXX
Sbjct: 1   MIRFARPKPI---IDSVSYNLLQKCYASGTPKGKSKLKTGQSLKRNKLTIKKGGGXXXXX 60

Query: 61  XXXXXXXSPEQEKLYDQCLNAPTPLRFLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 120
           XX        + ++ DQC+NAP P+R+L+P                              
Sbjct: 61  XXDEVDKG--KGRISDQCINAPCPVRYLRPKEREREARREKLGLISKARQKEIDFQKKGG 120

Query: 121 S-KLGVSDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQ 180
           S  +GV+ +P  IGT GLD ISLG+   D++PKY++T EDG RLAKEYSRVLMR HRAR+
Sbjct: 121 SFTMGVTTAPMRIGTPGLDYISLGIFTEDELPKYKVTVEDGIRLAKEYSRVLMREHRARR 180

Query: 181 AAESTLLQMKKEAIEALPEHLKAAALVPDLTKFPPNRFMATLTPPIEGYIEKV-KEAARR 240
            AE +L++M+  A+EALPE+LK AALV DLT FP +R  ATLTPPIEGY+E++   AAR+
Sbjct: 181 VAEISLMKMRNAAVEALPENLKKAALVRDLTPFPVSRGTATLTPPIEGYLERIMNAAARK 240

Query: 241 SSGKEKLR 247
           SSGKEKLR
Sbjct: 241 SSGKEKLR 243

The following BLAST results are available for this feature:

BLAST of Cla97C05G081280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022980123.1	1.4e-89	93.15	uncharacterized protein LOC111479606 [Cucurbita maxima]	[more]
XP_022924790.1	9.9e-88	91.94	uncharacterized protein LOC111432182 [Cucurbita moschata]	[more]
XP_023527048.1	1.7e-87	91.53	uncharacterized protein LOC111790399 [Cucurbita pepo subsp. pepo]	[more]
XP_022147522.1	8.4e-87	89.84	uncharacterized protein LOC111016425 [Momordica charantia]	[more]
XP_008437945.1	9.0e-81	87.85	PREDICTED: uncharacterized protein LOC103483214 [Cucumis melo] >ADN34170.1 hypot...	[more]

BLAST of Cla97C05G081280 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AVT5\|A0A1S3AVT5_CUCME	5.9e-81	87.85	uncharacterized protein LOC103483214 OS=Cucumis melo OX=3656 GN=LOC103483214 PE=...	[more]
tr\|E5GCH1\|E5GCH1_CUCME	5.9e-81	87.85	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A0A0L3Z1\|A0A0A0L3Z1_CUCSA	7.8e-81	74.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119830 PE=4 SV=1	[more]
tr\|A0A2P5DKQ2\|A0A2P5DKQ2_PARAD	7.8e-73	63.01	Copper ion binding protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_054160...	[more]
tr\|A0A2P5ENJ7\|A0A2P5ENJ7_9ROSA	1.7e-72	62.60	Copper ion binding protein OS=Trema orientalis OX=63057 GN=TorRG33x02_170730 PE=...	[more]

BLAST of Cla97C05G081280 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C05G081280 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G05400.1	4.0e-59	51.78	copper ion binding	[more]
AT4G21140.1	9.6e-53	51.21	BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G05400.2...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005762	mitochondrial large ribosomal subunit

Vocabulary: **INTERPRO**
Term	Definition
IPR039145	MRPL40

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005761	mitochondrial ribosome
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G081280.1	Cla97C05G081280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..68
IPR039145	39S ribosomal protein L40, mitochondrial	PANTHER	PTHR13359	39S RIBOSOMAL PROTEIN L40, MITOCHONDRIAL	coord: 12..246

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G081280	Cla021182	Watermelon (97103) v1	wmwmbB206
Cla97C05G081280	Csa3G119830	Cucumber (Chinese Long) v2	cuwmbB204
Cla97C05G081280	MELO3C006052	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G081280	CSPI03G08190	Wild cucumber (PI 183967)	cpiwmbB209
Cla97C05G081280	Cucsa.258960	Cucumber (Gy14) v1	cgywmbB452
Cla97C05G081280	CmaCh14G020890	Cucurbita maxima (Rimu)	cmawmbB263
Cla97C05G081280	CmoCh14G021510	Cucurbita moschata (Rifu)	cmowmbB243
Cla97C05G081280	Lsi05G020960	Bottle gourd (USVL1VR-Ls)	lsiwmbB333
Cla97C05G081280	CsGy3G008330	Cucumber (Gy14) v2	cgybwmbB196
Cla97C05G081280	MELO3C006052.2	Melon (DHL92) v3.6.1	medwmbB423
Cla97C05G081280	Carg20955	Silver-seed gourd	carwmbB0513
Cla97C05G081280	CsaV3_3G008340	Cucumber (Chinese Long) v3	cucwmbB206
Cla97C05G081280	Bhi01G000320	Wax gourd	wgowmbB191

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G081280	Watermelon (97103) v2	wmbwmbB016
Cla97C05G081280	Watermelon (97103) v2	wmbwmbB130
Cla97C05G081280	Watermelon (97103) v2	wmbwmbB136
Cla97C05G081280	Silver-seed gourd	carwmbB0627
Cla97C05G081280	Silver-seed gourd	carwmbB1041
Cla97C05G081280	Silver-seed gourd	carwmbB1047
Cla97C05G081280	Cucumber (Gy14) v2	cgybwmbB294
Cla97C05G081280	Cucumber (Gy14) v2	cgybwmbB364
Cla97C05G081280	Cucumber (Gy14) v2	cgybwmbB444
Cla97C05G081280	Cucumber (Gy14) v1	cgywmbB144
Cla97C05G081280	Cucumber (Gy14) v1	cgywmbB226
Cla97C05G081280	Cucumber (Gy14) v1	cgywmbB381
Cla97C05G081280	Cucurbita maxima (Rimu)	cmawmbB344
Cla97C05G081280	Cucurbita maxima (Rimu)	cmawmbB345
Cla97C05G081280	Cucurbita maxima (Rimu)	cmawmbB429
Cla97C05G081280	Cucurbita maxima (Rimu)	cmawmbB652
Cla97C05G081280	Cucurbita maxima (Rimu)	cmawmbB761
Cla97C05G081280	Cucurbita maxima (Rimu)	cmawmbB860
Cla97C05G081280	Cucurbita moschata (Rifu)	cmowmbB328
Cla97C05G081280	Cucurbita moschata (Rifu)	cmowmbB330
Cla97C05G081280	Cucurbita moschata (Rifu)	cmowmbB410
Cla97C05G081280	Cucurbita moschata (Rifu)	cmowmbB625
Cla97C05G081280	Cucurbita moschata (Rifu)	cmowmbB733
Cla97C05G081280	Cucurbita moschata (Rifu)	cmowmbB833
Cla97C05G081280	Cucurbita moschata (Rifu)	cmowmbB889
Cla97C05G081280	Wild cucumber (PI 183967)	cpiwmbB321
Cla97C05G081280	Wild cucumber (PI 183967)	cpiwmbB399
Cla97C05G081280	Wild cucumber (PI 183967)	cpiwmbB492
Cla97C05G081280	Cucumber (Chinese Long) v3	cucwmbB319
Cla97C05G081280	Cucumber (Chinese Long) v3	cucwmbB395
Cla97C05G081280	Cucumber (Chinese Long) v2	cuwmbB311
Cla97C05G081280	Cucumber (Chinese Long) v2	cuwmbB381
Cla97C05G081280	Bottle gourd (USVL1VR-Ls)	lsiwmbB023
Cla97C05G081280	Bottle gourd (USVL1VR-Ls)	lsiwmbB339
Cla97C05G081280	Melon (DHL92) v3.6.1	medwmbB024
Cla97C05G081280	Melon (DHL92) v3.6.1	medwmbB117
Cla97C05G081280	Melon (DHL92) v3.6.1	medwmbB476
Cla97C05G081280	Melon (DHL92) v3.5.1	mewmbB027
Cla97C05G081280	Melon (DHL92) v3.5.1	mewmbB126
Cla97C05G081280	Melon (DHL92) v3.5.1	mewmbB437
Cla97C05G081280	Melon (DHL92) v3.5.1	mewmbB483
Cla97C05G081280	Watermelon (Charleston Gray)	wcgwmbB105
Cla97C05G081280	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G081280	Watermelon (Charleston Gray)	wcgwmbB231
Cla97C05G081280	Watermelon (Charleston Gray)	wcgwmbB268
Cla97C05G081280	Watermelon (97103) v1	wmwmbB210
Cla97C05G081280	Watermelon (97103) v1	wmwmbB262
Cla97C05G081280	Wax gourd	wgowmbB082
Cla97C05G081280	Wax gourd	wgowmbB196