CmoCh14G020420 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh14G020420
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Pentatricopeptide repeat-containing protein
Location	Cmo_Chr14 : 14933361 .. 14937402 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCGTACGGATTTCTTGCAGAGCTCCACGATTCGACGCGCGCCGGATTCCCCAGATAAGGATTAACGTCTCCAATGTCGGATTTCTTCTTCTCTATCCTCTTTGCTTGAACACATCTTTCCAATTTTTTGTTCAAACGTTGGATTTTCGTTCTGCGATGCTCTCTGCCGCTTAATCGTATCGTGGAATTTGTTCATACTGGGCGAACAACATTGTTTCTTTTTTGTGCGATTTTGAGTTTTCTCGTTGATTATGGAAACCTCCGTCTGTAACATTCTCTATCAAATTCATCCAAAACAGCCGCTGGTTAATGGAACTGCAAGGAGTTCGTATTCCTGTTACTGTAGAGGCTTAACTGGGCGAAGACTCCGAGTTTTAAGTCCTCGCAGAAGGTGTTATCAATTGTGTGCTGTTGCCGCCATTGTTGAAGAAGTTCACAAGTTAGAGAGTGGAAGAGAGAAACCGAGGTTTCGGTGGTTGGAGGTAGGCTCTGATATTACTGAAATGCAAAAGCAGGCTATATCTCAGCTTCCTCCCAAGATGACTAAAAGATGTAAGGCTGTGATGAAGCAAATTATCTGTTTTTCGCCTCAAAATGGTAATTTATCAGATATGTTGGCGGCGTGGGTGAGGATTATGAAGCCTAAAAGAGCTGATTGGCTTTCAGTTCTTAAGCATTTGAGAATTTTGGATCATCCACTTTACATCGAGGTACGTTATATCTCCCATAGTTTCATGAATCTACTGCATAGTATTCTGAAGGTTAAAGTACAAGTTCTAGTCTAACTTAAAAGTACCTAATCTTCAAAACTTTCAATTTTTTGCAAATTTTTGTTCAATAAATCTCTAAGATTTTATAGTTAGATTGACAAATTCGAAAATTTTAAAAATTAATGGTTCTATTAAACATAAATTTGAGTTTTATGTTTGACTGAATCCTAAACTTGCAATTTATGTCTAAATTTAAGAAAATTTAATAATTGAGGACTAAATTTATAATCTTGAAAGTTTAAGAACCAAATGTACATGAACACGAACAATATCATCTAGATTCTTTGCTAAACCTCATCTTATTCTTGATAAACCTCATCTAGATTCATCTTATTCTTGATAAACCTCATTGTTATATAGGAACCTATTCTGATTGTTAAGTTCCTTCCCCTTCTTTGAGTTTGACAGAAGCAATCCAAATTTCTCTTGAAGTTGTATAATATAGTTTCAAATATCATCTAGATTCTTTGCTTATGTTTAAGAGACTATTTTGCATATTCGAACTGCTCGGTTGATACGATGAAGTTTCCTATTTATTAAGACTCCGTTTGGTAACGATTTAATTTTGTGTTTCCGAAAACTAAATTTATAACCAAATTTTAAGAATTAAAAAAAAAAAAAAGTTTTTCAAAAACATATTTTTGTTTAAGAATTCAAAGATGAAGATTATGGTAAGTAAATTATGCAAAAACAAACACAATATTTAAAATTCAAATGGTTATCAAATGGCGTGACCTTAGCGATCGATGATATCTCGTAATCTAAGTCGATGAGTTTGTTTGTTGCTCTTAGGTGGCAGAAGCTGCTCTTGTAGAGAGAACGTTTGAAGCCAGTACTCGGGACTACACAAAGATAATTCATTACTATGGGAAACGAAACCAACTCGAGGATGCTGAAAGAATTCTCTTAAGCATGAGAGAAAGGGGTTTTGCTTGTGATCAAATAACATTAACCACAATGATCCACATTTATAGCAAGGCTGACGAACTTAGTCTGGCCAAACAAACTTTTGAAGAGCTCAAACTGCTCGAGGAACCGTTGGATCGAAGATCGTATGATGCGATGATTATGGCATTTATCCGAGCTGGGATGCCCGAGGAAGGTGAGAACATTCTCAAAGAAATGGATGAGAAAGACATATATGCAGGAAGTGAAGTTTACAAGGCTTTGTTAAGAGCGTACTCGATGGCTAGCAATGCCGAAGGAGCTCAAAGGGTGTTCGATGCCATTCAGTTGGCTGCTATTCCTCCTGATGATAAGTTATGTGGTCTCCTGATCAATGCGTATTTGATGGCAGACCAAAGCCAAAAGGCACAAATTGCTTTTGACAATATGAGGAGGGCTGGCCTTGAACCTAGTGATAAATGCATAGCGTTGGTATTAAGTGCATATGAAAAGGAGAACAGGCTGAACGCTGCGTTGGAACTTCTCATAGATTTGGAGAAGGAGAAGCTCGTGGTTGGGAAGGAAGCTTCAGAAGTACTGGCAGCCTGGCTTAAAAGACTAGGGGTGGTAGAAGAGGTAGAACTTGTCTTGAGAGAATACGCTGTGAAAGAAGCGAGTGGATAAGGTACGAACAACTCAAGCCCACTACTAGTAGAAATTGTCCGCCTTGGCCTGTTATGTATTGCCGTCAGCCTCACAGTTTTAGAACGCGTCTACTAGGGAGATGTTTCCACACAGCTGTAAGGAGTGCTTCGTTCCCCTCTCCAATCCATGTGGGATCTCACAATCCACTCCATTGGGGCCTAGCGTCCTCGCTGGCACACCACCCGGTGTCTGGCTCTGATACCTTTGTAACAGCCCAAGCCCACTGCTAGCAGAAATTGTTCGTTTTGGCATGTTACGTATCACCGTCAGCCTCACAGTTTTAAAACGCGTCTATTAGGGATATGTTTCCACAACCTTGTAAGGAGTGTTTCGTTTCCCTCTCCAACTGATGTGAGATGTTACAGGATAAGGTACGAGCACTTCCTTGGATGCAAAGTTCACTTTTCCCATTGAATTGAAGTATAAAGAACACAAATGTCTGCTTCATTTCTGCTTTTAAGGGTAGTGGTTGCATAATTTTCAAATAGAAATAGATGAGAAAAGAGTTTTACAAGCTTGTTATTGAAACCTTCATGATGATCAAAACATGATATAAGTAAGCTGAAGTTTTAACTTATTGATCAGCCAGGAAGAACACTGAGATTATTAGCAGTCCAATCACGAGTTAGGCTCGTTTAGGGACGTAGGGAAATAGCGAGGCACCAATGCGTTGCATCGTGGAGAGTTGTTTTTGGACAATCTGTTGATCAATGCTGCCCATGGATGGGAAATTGTTGCTTCTAATTTGACAGAATTCCAATGGAGACTGCAACTTTGCCGGCGAAGCTTGCTCCACAGGATCGAGAAGCAGTGAAAGATCTGATGCAGCAGAAGGCAAAGAAGGGCAATCTAATGGAAGGTTTACAATTGAGGGTATTGTTGGCTTGACCAGATCTTGTGGCTGTGCCTGTGGATGTGGTGCGGTTCTTGAAAGCTCAGATGCTGCTAGGTACGCTTGCAAGTATGAGAGCTCTACTTGCAACCTCGCAGCCTAAAAAATAATGTATGGCACTCGAATTAGTTTACATTTTCGAAAGCCAAATTGTTATCGAATAGAGCTTCAGCTAATTTTGTTTTACCTGTTGTTGAAGGGCAAAGATATGAGCAACACAACCAAAAACTGGCTCTCTAACACGAGCTTGTGCCTCGTAGCATATGGTTATAGCTGCATCGAGGCGCTTGTGTTCAGGAATATGCAATAGCAGCTTCGACACATTACTAGCTCCGAACACTTTGTGCACGGCTGCAAAATGAGTCGTGCCTTGTTCAGAGTCAAAGTAAGGTGCAAATATACACTCCGGTGTACACTTCCTTCGCAGAAACTTGCACGCCCCACACGGTCCACCGCTGCCATTGCTGCTACTACCACCATTGCCCTCCTTGCAACCTCCACCGCCGTGCCTCGAGCTCATCTCGGCCTTGCTTTCTTGCCGTTCTTTCATCAGAAGCTAAGCAAGGCTTACTGGAAGAACAAGACAAGTATGGATTTATATATATATATATGGAGCTGACTTTGAGGTTTGTGGATCACAAGGTATGTAACACTTTCTTTTACTCTATCTCTTAGTTGTTTGATGGGATTTGCAAATTAGAAGGAAATGTAGGTTTTGGAAGATTGAAACATAGGTCCATTTTTGTAATAATATTAATGAATTAATAATATTATGAAAATTCCGCCACCC

mRNA sequence

GTCGTACGGATTTCTTGCAGAGCTCCACGATTCGACGCGCGCCGGATTCCCCAGATAAGGATTAACGTCTCCAATGTCGGATTTCTTCTTCTCTATCCTCTTTGCTTGAACACATCTTTCCAATTTTTTGTTCAAACGTTGGATTTTCGTTCTGCGATGCTCTCTGCCGCTTAATCGTATCGTGGAATTTGTTCATACTGGGCGAACAACATTGTTTCTTTTTTGTGCGATTTTGAGTTTTCTCGTTGATTATGGAAACCTCCGTCTGTAACATTCTCTATCAAATTCATCCAAAACAGCCGCTGGTTAATGGAACTGCAAGGAGTTCGTATTCCTGTTACTGTAGAGGCTTAACTGGGCGAAGACTCCGAGTTTTAAGTCCTCGCAGAAGGTGTTATCAATTGTGTGCTGTTGCCGCCATTGTTGAAGAAGTTCACAAGTTAGAGAGTGGAAGAGAGAAACCGAGGTTTCGGTGGTTGGAGGTAGGCTCTGATATTACTGAAATGCAAAAGCAGGCTATATCTCAGCTTCCTCCCAAGATGACTAAAAGATGTAAGGCTGTGATGAAGCAAATTATCTGTTTTTCGCCTCAAAATGGTAATTTATCAGATATGTTGGCGGCGTGGGTGAGGATTATGAAGCCTAAAAGAGCTGATTGGCTTTCAGTTCTTAAGCATTTGAGAATTTTGGATCATCCACTTTACATCGAGGTGGCAGAAGCTGCTCTTGTAGAGAGAACGTTTGAAGCCAGTACTCGGGACTACACAAAGATAATTCATTACTATGGGAAACGAAACCAACTCGAGGATGCTGAAAGAATTCTCTTAAGCATGAGAGAAAGGGGTTTTGCTTGTGATCAAATAACATTAACCACAATGATCCACATTTATAGCAAGGCTGACGAACTTAGTCTGGCCAAACAAACTTTTGAAGAGCTCAAACTGCTCGAGGAACCGTTGGATCGAAGATCGTATGATGCGATGATTATGGCATTTATCCGAGCTGGGATGCCCGAGGAAGGTGAGAACATTCTCAAAGAAATGGATGAGAAAGACATATATGCAGGAAGTGAAGTTTACAAGGCTTTGTTAAGAGCGTACTCGATGGCTAGCAATGCCGAAGGAGCTCAAAGGGTGTTCGATGCCATTCAGTTGGCTGCTATTCCTCCTGATGATAAGTTATGTGGTCTCCTGATCAATGCGTATTTGATGGCAGACCAAAGCCAAAAGGCACAAATTGCTTTTGACAATATGAGGAGGGCTGGCCTTGAACCTAGTGATAAATGCATAGCGTTGGTATTAAGTGCATATGAAAAGGAGAACAGGCTGAACGCTGCGTTGGAACTTCTCATAGATTTGGAGAAGGAGAAGCTCGTGGTTGGGAAGGAAGCTTCAGAAGTACTGGCAGCCTGGCTTAAAAGACTAGGGGTGGTAGAAGAGGTAGAACTTGTCTTGAGAGAATACGCTGTGAAAGAAGCGAGTGGATAAGGTACGAACAACTCAAGCCCACTACTAGTAGAAATTGTCCGCCTTGGCCTGTTATGTATTGCCGTCAGCCTCACAGTTTTAGAACGCGTCTACTAGGGAGATGTTTCCACACAGCTGTAAGGAGTGCTTCGTTCCCCTCTCCAATCCATGTGGGATCTCACAATCCACTCCATTGGGGCCTAGCGTCCTCGCTGGCACACCACCCGGTGTCTGGCTCTGATACCTTTGTAACAGCCCAAGCCCACTGCTAGCAGAAATTGTTCGTTTTGGCATGTTACGTATCACCGTCAGCCTCACAGTTTTAAAACGCGTCTATTAGGGATATGTTTCCACAACCTTGTAAGGAGTGTTTCGTTTCCCTCTCCAACTGATGTGAGATGTTACAGGATAAGCCAGGAAGAACACTGAGATTATTAGCAGTCCAATCACGAGTTAGGCTCGTTTAGGGACGTAGGGAAATAGCGAGGCACCAATGCGTTGCATCGTGGAGAGTTGTTTTTGGACAATCTGTTGATCAATGCTGCCCATGGATGGGAAATTGTTGCTTCTAATTTGACAGAATTCCAATGGAGACTGCAACTTTGCCGGCGAAGCTTGCTCCACAGGATCGAGAAGCAGTGAAAGATCTGATGCAGCAGAAGGCAAAGAAGGGCAATCTAATGGAAGGTTTACAATTGAGGGTATTGTTGGCTTGACCAGATCTTGTGGCTGTGCCTGTGGATGTGGTGCGGTTCTTGAAAGCTCAGATGCTGCTAGGTACGCTTGCAAGTATGAGAGCTCTACTTGCAACCTCGCAGCCTAAAAAATAATGGCAAAGATATGAGCAACACAACCAAAAACTGGCTCTCTAACACGAGCTTGTGCCTCGTAGCATATGGTTATAGCTGCATCGAGGCGCTTGTGTTCAGGAATATGCAATAGCAGCTTCGACACATTACTAGCTCCGAACACTTTGTGCACGGCTGCAAAATGAGTCGTGCCTTGTTCAGAGTCAAAGTAAGGTGCAAATATACACTCCGGTGTACACTTCCTTCGCAGAAACTTGCACGCCCCACACGGTCCACCGCTGCCATTGCTGCTACTACCACCATTGCCCTCCTTGCAACCTCCACCGCCGTGCCTCGAGCTCATCTCGGCCTTGCTTTCTTGCCGTTCTTTCATCAGAAGCTAAGCAAGGCTTACTGGAAGAACAAGACAAGTATGGATTTATATATATATATATGGAGCTGACTTTGAGGTTTGTGGATCACAAGGTATGTAACACTTTCTTTTACTCTATCTCTTAGTTGTTTGATGGGATTTGCAAATTAGAAGGAAATGTAGGTTTTGGAAGATTGAAACATAGGTCCATTTTTGTAATAATATTAATGAATTAATAATATTATGAAAATTCCGCCACCC

Coding sequence (CDS)

ATGGAAACCTCCGTCTGTAACATTCTCTATCAAATTCATCCAAAACAGCCGCTGGTTAATGGAACTGCAAGGAGTTCGTATTCCTGTTACTGTAGAGGCTTAACTGGGCGAAGACTCCGAGTTTTAAGTCCTCGCAGAAGGTGTTATCAATTGTGTGCTGTTGCCGCCATTGTTGAAGAAGTTCACAAGTTAGAGAGTGGAAGAGAGAAACCGAGGTTTCGGTGGTTGGAGGTAGGCTCTGATATTACTGAAATGCAAAAGCAGGCTATATCTCAGCTTCCTCCCAAGATGACTAAAAGATGTAAGGCTGTGATGAAGCAAATTATCTGTTTTTCGCCTCAAAATGGTAATTTATCAGATATGTTGGCGGCGTGGGTGAGGATTATGAAGCCTAAAAGAGCTGATTGGCTTTCAGTTCTTAAGCATTTGAGAATTTTGGATCATCCACTTTACATCGAGGTGGCAGAAGCTGCTCTTGTAGAGAGAACGTTTGAAGCCAGTACTCGGGACTACACAAAGATAATTCATTACTATGGGAAACGAAACCAACTCGAGGATGCTGAAAGAATTCTCTTAAGCATGAGAGAAAGGGGTTTTGCTTGTGATCAAATAACATTAACCACAATGATCCACATTTATAGCAAGGCTGACGAACTTAGTCTGGCCAAACAAACTTTTGAAGAGCTCAAACTGCTCGAGGAACCGTTGGATCGAAGATCGTATGATGCGATGATTATGGCATTTATCCGAGCTGGGATGCCCGAGGAAGGTGAGAACATTCTCAAAGAAATGGATGAGAAAGACATATATGCAGGAAGTGAAGTTTACAAGGCTTTGTTAAGAGCGTACTCGATGGCTAGCAATGCCGAAGGAGCTCAAAGGGTGTTCGATGCCATTCAGTTGGCTGCTATTCCTCCTGATGATAAGTTATGTGGTCTCCTGATCAATGCGTATTTGATGGCAGACCAAAGCCAAAAGGCACAAATTGCTTTTGACAATATGAGGAGGGCTGGCCTTGAACCTAGTGATAAATGCATAGCGTTGGTATTAAGTGCATATGAAAAGGAGAACAGGCTGAACGCTGCGTTGGAACTTCTCATAGATTTGGAGAAGGAGAAGCTCGTGGTTGGGAAGGAAGCTTCAGAAGTACTGGCAGCCTGGCTTAAAAGACTAGGGGTGGTAGAAGAGGTAGAACTTGTCTTGAGAGAATACGCTGTGAAAGAAGCGAGTGGATAA

Homology

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BLAST of CmoCh14G020420 vs. Swiss-Prot
Match: PPR1_ARATH (Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana GN=At1g01970 PE=2 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 3.7e-123
Identity = 217/364 (59.62%), Postives = 289/364 (79.40%), Query Frame = 1


Query: 46  RRCYQLCAVAAIVEEVHKLESGREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVM 105
           R C   C  +  + EV + E   +   F W +VG ++TE Q +AI+++P KM+KRC+A+M
Sbjct: 43  RLCSCKCNASLAIGEVVEKEDAEQSRSFNWADVGLNLTEEQDEAITRIPIKMSKRCQALM 102

Query: 106 KQIICFSPQNGNLSDMLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFE 165
           +QIICFSP+ G+  D+L AW+R M P RADWLS+LK L+ LD P YI+VAE +L++ +FE
Sbjct: 103 RQIICFSPEKGSFCDLLGAWLRRMNPIRADWLSILKELKNLDSPFYIKVAEFSLLQDSFE 162

Query: 166 ASTRDYTKIIHYYGKRNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQT 225
           A+ RDYTKIIHYYGK NQ+EDAER LLSM+ RGF  DQ+TLT M+ +YSKA    LA++T
Sbjct: 163 ANARDYTKIIHYYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEET 222

Query: 226 FEELKLLEEPLDRRSYDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSM 285
           F E+KLL EPLD RSY +MIMA+IRAG+PE+GE++L+EMD ++I AG EVYKALLR YSM
Sbjct: 223 FNEIKLLGEPLDYRSYGSMIMAYIRAGVPEKGESLLREMDSQEICAGREVYKALLRDYSM 282

Query: 286 ASNAEGAQRVFDAIQLAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKC 345
             +AEGA+RVFDA+Q+A I PD KLCGLLINAY ++ QSQ A++AF+NMR+AG++ +DKC
Sbjct: 283 GGDAEGAKRVFDAVQIAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDKC 342

Query: 346 IALVLSAYEKENRLNAALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYA 405
           +ALVL+AYEKE +LN AL  L++LEK+ +++GKEAS VLA W K+LGVVEEVEL+LRE++
Sbjct: 343 VALVLAAYEKEEKLNEALGFLVELEKDSIMLGKEASAVLAQWFKKLGVVEEVELLLREFS 402

Query: 406 VKEA 410
             ++
Sbjct: 403 SSQS 406

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BLAST of CmoCh14G020420 vs. Swiss-Prot
Match: PPR51_ARATH (Pentatricopeptide repeat-containing protein At1g19525 OS=Arabidopsis thaliana GN=At1g19525 PE=2 SV=2)

HSP 1 Score: 151.0 bits (380), Expect = 2.9e-35
Identity = 84/209 (40.19%), Postives = 124/209 (59.33%), Query Frame = 1


Query: 194 MRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRSYDAMIMAFIRAGM 253
           M + G   D +T T ++H+YSK+     A + FE LK      D + Y+AMI+ ++ AG 
Sbjct: 1   MSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGK 60

Query: 254 PEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQLAAIPP-DDKLCG 313
           P+ GE ++KEM  K++ A  EVY ALLRAY+   +A GA  +  ++Q A+  P   +   
Sbjct: 61  PKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYS 120

Query: 314 LLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELLIDLEKE 373
           L + AY  A Q  KA+  FD MR+ G +P DKCIA ++ AY+ EN L+ AL LL+ LEK+
Sbjct: 121 LFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKD 180

Query: 374 KLVVGKEASEVLAAWLKRLGVVEEVELVL 402
            + +G     VL  W+  LG++EE E +L
Sbjct: 181 GIEIGVITYTVLVDWMANLGLIEEAEQLL 209

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BLAST of CmoCh14G020420 vs. Swiss-Prot
Match: PP186_ARATH (Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana GN=At2g35130 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.8e-13
Identity = 55/224 (24.55%), Postives = 105/224 (46.88%), Query Frame = 1


Query: 180 KRNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRR 239
           ++   E+A  +   M+         T   MI++Y KA +  ++ + + E++  +   +  
Sbjct: 241 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 300

Query: 240 SYDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAI 299
           +Y A++ AF R G+ E+ E I +++ E  +     VY AL+ +YS A    GA  +F  +
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360

Query: 300 QLAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRL 359
           Q     PD     ++++AY  A     A+  F+ M+R G+ P+ K   L+LSAY K   +
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420

Query: 360 NAALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLRE 404
                ++ ++ +  +         +     RLG   ++E +L E
Sbjct: 421 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 464

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BLAST of CmoCh14G020420 vs. Swiss-Prot
Match: PP163_ARATH (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.4e-13
Identity = 63/234 (26.92%), Postives = 109/234 (46.58%), Query Frame = 1


Query: 171 YTKIIHYYGKRNQL-EDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEEL 230
           Y  I+  +GK  +       +L  MR +G   D+ T +T++   ++   L  AK+ F EL
Sbjct: 248 YNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL 307

Query: 231 KLLEEPLDRRSYDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNA 290
           K         +Y+A++  F +AG+  E  ++LKEM+E    A S  Y  L+ AY  A  +
Sbjct: 308 KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFS 367

Query: 291 EGAQRVFDAIQLAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALV 350
           + A  V + +    + P+      +I+AY  A +  +A   F +M+ AG  P+      V
Sbjct: 368 KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427

Query: 351 LSAYEKENRLNAALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLRE 404
           LS   K++R N  +++L D++       +     + A     G+ + V  V RE
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFRE 481

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BLAST of CmoCh14G020420 vs. Swiss-Prot
Match: PP413_ARATH (Pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.5e-12
Identity = 52/225 (23.11%), Postives = 105/225 (46.67%), Query Frame = 1


Query: 129 MKPKRADWLSVLK-HLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGKRNQLEDA 188
           ++P R  W +++  H +   H +  E+ EA         +T  Y  +I+ YG + + +D 
Sbjct: 475 IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATT-YNIMINSYGDQERWDDM 534

Query: 189 ERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRSYDAMIMA 248
           +R+L  M+ +G   + +T TT++ +Y K+   + A +  EE+K +        Y+A+I A
Sbjct: 535 KRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINA 594

Query: 249 FIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQLAAIPPD 308
           + + G+ E+  N  + M    +        +L+ A+        A  V   ++   + PD
Sbjct: 595 YAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPD 654

Query: 309 DKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSA 353
                 L+ A +  D+ QK  + ++ M  +G +P  K  +++ SA
Sbjct: 655 VVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSA 698

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BLAST of CmoCh14G020420 vs. TrEMBL
Match: A0A0A0L7L8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126080 PE=4 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 9.2e-182
Identity = 330/410 (80.49%), Postives = 365/410 (89.02%), Query Frame = 1


Query: 1   METSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLCAVAAIVEE 60
           M+ S  NILYQ+H   PLVNGT+ +SYS Y R        VLS RRRC Q+    AIV+E
Sbjct: 1   MQISTSNILYQLH--LPLVNGTSNTSYSRYWRDSI-----VLSSRRRCSQMATATAIVDE 60

Query: 61  VHKLESGREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSD 120
           +HKLES REKPRFRW+EVG DITE QKQAISQLPPKMTKRCKAVMKQIICFSPQ G LSD
Sbjct: 61  IHKLESEREKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSD 120

Query: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180
           MLAAWVRIMKP+RADWL VLKHLRIL+HPLYI+VAEAAL E TFEA+TRDYTKIIH+YGK
Sbjct: 121 MLAAWVRIMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGK 180

Query: 181 RNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRS 240
           +NQLEDAE++LLSMRERGF CDQITLTTMIHIYSKAD+L+LAKQTFEELKLLE+PLD+RS
Sbjct: 181 QNQLEDAEKVLLSMRERGFVCDQITLTTMIHIYSKADKLNLAKQTFEELKLLEQPLDKRS 240

Query: 241 YDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQ 300
           + AMIMA++RAG PEEGE ILKEMD KDIYAGSEVYKALLRAYSM  NAEGAQRVFDAIQ
Sbjct: 241 FGAMIMAYVRAGFPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMVGNAEGAQRVFDAIQ 300

Query: 301 LAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360
           LAAI PD+KLCGLLINAYLMA QS++AQIAFDNMRRAG+EPSDKCIAL LSAYEKENRLN
Sbjct: 301 LAAITPDEKLCGLLINAYLMAGQSREAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLN 360

Query: 361 AALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEAS 411
           +ALELLIDLEK+ ++VGKEAS++LAAWLKRLGVVEEVE+VLREY  KE +
Sbjct: 361 SALELLIDLEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEVN 403

[Close]

BLAST of CmoCh14G020420 vs. TrEMBL
Match: A0A061DV02_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein, putative OS=Theobroma cacao GN=TCM_005495 PE=4 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 2.8e-138
Identity = 250/417 (59.95%), Postives = 325/417 (77.94%), Query Frame = 1


Query: 1   METSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLCAV------ 60
           M TS CNI Y  +   P +N T +  +    +    R   +   +   +  C V      
Sbjct: 1   MVTSACNIPYCSYSTYPFINKTKKQIHP---QSWGNRNPLLFQKKGAKFSSCKVNNQPEI 60

Query: 61  -AAIVEEVHKLESGREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSP 120
            ++ VEE  K E+  EK R++W+E+G DI E QKQAI++LP KMTKRCKA+MKQIICF P
Sbjct: 61  ASSNVEEKGKPETNEEKRRYKWVEIGPDIAEEQKQAITELPFKMTKRCKALMKQIICFCP 120

Query: 121 QNGNLSDMLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTK 180
           + G+L+D+LAAWV+IMKP+RADWL VLK L+I++HPLY EVAE AL+E +FEA+ RD+TK
Sbjct: 121 EKGSLADLLAAWVKIMKPRRADWLVVLKELKIMEHPLYFEVAELALLEESFEANIRDFTK 180

Query: 181 IIHYYGKRNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLE 240
           IIH YGK+ +L++AE IL++M+ RGF CDQ+TLTTM+H+YSKA  L LA++TFEE+KLL 
Sbjct: 181 IIHGYGKQKRLQEAENILVAMKRRGFICDQVTLTTMVHMYSKAGNLKLAEETFEEIKLLG 240

Query: 241 EPLDRRSYDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQ 300
           + LD+RSY +MIMA+IR+G PE+GE +L+EMD ++IYAGSEVYKALLRAYSM  +A GAQ
Sbjct: 241 QQLDKRSYGSMIMAYIRSGTPEQGEALLREMDSQEIYAGSEVYKALLRAYSMLGDANGAQ 300

Query: 301 RVFDAIQLAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAY 360
           RVFD IQLA I PD ++CGLLINAY +A QS KA IAF+NMRRAGLEPSDKC+ALV++AY
Sbjct: 301 RVFDTIQLAGISPDARMCGLLINAYQLAGQSDKAHIAFENMRRAGLEPSDKCVALVVAAY 360

Query: 361 EKENRLNAALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEAS 411
           EK+N+LN AL+ L++LE++ +VVGKEAS +LA W K+LGVVE+VELVLRE+A KE +
Sbjct: 361 EKQNKLNKALDFLMELERDGIVVGKEASGILAQWFKKLGVVEQVELVLREFAAKETN 414

[Close]

BLAST of CmoCh14G020420 vs. TrEMBL
Match: W9QSE5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022440 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 6.2e-138
Identity = 245/357 (68.63%), Postives = 304/357 (85.15%), Query Frame = 1


Query: 54  VAAIVEEVHKLESGREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSP 113
           VA  VEE  K E+G  KP+F+W+EVG  ITE QK+AISQL PKMTKRC+A+MKQ+ICFS 
Sbjct: 44  VATSVEETEKAENGGGKPKFKWVEVGPGITESQKEAISQLSPKMTKRCRALMKQLICFSA 103

Query: 114 QNGNLSDMLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTK 173
              +L+++LAAWVRIMKP+RADWL+++K L+I+DHPLY +VAE AL+E +FEA+ RDYTK
Sbjct: 104 HKASLNELLAAWVRIMKPQRADWLAIIKQLKIMDHPLYFQVAEVALLEESFEANIRDYTK 163

Query: 174 IIHYYGKRNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLE 233
           IIH YGK+N+LEDAE+ LL+M+ RGF  DQ+TLTT IH+YSKA  L LA++TFEELKLL 
Sbjct: 164 IIHCYGKQNRLEDAEKTLLAMKSRGFIRDQVTLTTFIHMYSKAGNLKLAEETFEELKLLG 223

Query: 234 EPLDRRSYDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQ 293
           +PLD+RSY +MIMA+IRAGMP++GENIL+EMD ++IYAGSEVYKALLRAYSM  +AEGAQ
Sbjct: 224 QPLDKRSYGSMIMAYIRAGMPDQGENILREMDVEEIYAGSEVYKALLRAYSMTGDAEGAQ 283

Query: 294 RVFDAIQLAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAY 353
           RVFDAIQLA I PD +LCGLLINAY+ + QS+KA +AF NMRRAGLEPSDKC+ALVL AY
Sbjct: 284 RVFDAIQLAGILPDPRLCGLLINAYVESGQSEKACVAFGNMRRAGLEPSDKCVALVLCAY 343

Query: 354 EKENRLNAALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEAS 411
           EKEN+L  AL+ L++LE+  ++VG+EASE L  W ++LGVV+EV+LVLREYA K AS
Sbjct: 344 EKENKLQRALDFLMELERHGIMVGEEASETLVGWFRKLGVVKEVDLVLREYASKGAS 400

[Close]

BLAST of CmoCh14G020420 vs. TrEMBL
Match: B9IC06_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s06610g PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 4.9e-135
Identity = 252/405 (62.22%), Postives = 315/405 (77.78%), Query Frame = 1


Query: 1   METSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLCAVAAIVEE 60
           M T V NIL    P  PL +   ++S   +      ++   L+  +   Q    A  VEE
Sbjct: 1   MATYVINILPFSSPTCPLHSEPKKTSNLHFLGNSLCQQPVTLTSCKSQIQPVLAAINVEE 60

Query: 61  VHKLESGREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSD 120
             + E G+EKP+FRW+E+G +I E QKQAISQLP KMTKRCKA+M+QIICF+ + G+L  
Sbjct: 61  KVEGEIGKEKPKFRWVEIGPNIPEEQKQAISQLPFKMTKRCKALMRQIICFNDKKGSLRG 120

Query: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180
           +L+AWV+IMKP+R DWLS+LK L  ++HPLY+EV E AL+E +FEA+ RDYTKIIH+YG 
Sbjct: 121 LLSAWVKIMKPRRKDWLSILKELNKMEHPLYLEVVEIALLEESFEANVRDYTKIIHFYGM 180

Query: 181 RNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRS 240
            NQLE+AER  L+M ERGF  DQ+TLT MIH+YSK   L+LA++TFEELKLL +PLDRRS
Sbjct: 181 NNQLEEAERTRLAMEERGFVSDQVTLTAMIHMYSKGGNLTLAEETFEELKLLGQPLDRRS 240

Query: 241 YDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQ 300
           Y +MIMA+IRAGMPE+GE IL+EMD ++I AGSEVYKALLRAYS+  +A+GAQRVFDAIQ
Sbjct: 241 YGSMIMAYIRAGMPEKGEMILREMDAQEIRAGSEVYKALLRAYSIIGDADGAQRVFDAIQ 300

Query: 301 LAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360
           LA IPPDD+ C +L+NAY MA QSQ A   F+NM RAG+EP+D+C+ALVL+AYEKEN+LN
Sbjct: 301 LAGIPPDDRTCAVLLNAYGMAGQSQNAYATFENMWRAGIEPTDRCVALVLAAYEKENKLN 360

Query: 361 AALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYA 406
            AL+ LI LE+EKL++GKEASEVLA W  RLGVV+EVELVLREYA
Sbjct: 361 QALDFLIGLEREKLIIGKEASEVLAEWFGRLGVVKEVELVLREYA 405

[Close]

BLAST of CmoCh14G020420 vs. TrEMBL
Match: A0A067K157_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14514 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 1.9e-134
Identity = 253/409 (61.86%), Postives = 312/409 (76.28%), Query Frame = 1


Query: 1   METSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLCA---VAAI 60
           ME  V NIL    P     +GT + +YS Y           L  +   + +C     A  
Sbjct: 1   MEICVSNILPLSFPNCSPTSGTIKPTYSNYLGNF-------LLKKSVNFGICIPVLAAVS 60

Query: 61  VEEVHKLESGREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFS--PQN 120
            EE+ ++E   EK  F+W+++  +ITE QKQA+S+LPPKMT RCKA+MKQIIC+S   QN
Sbjct: 61  TEEIGRVEVKEEKSSFKWVKIDPNITEPQKQAVSELPPKMTNRCKAIMKQIICYSHQAQN 120

Query: 121 GNLSDMLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKII 180
            +LSD+L AWVR+MKP+R DWLSVL+ L+ ++HPLY EVAE AL+E +FEA+ RDYTK+I
Sbjct: 121 ASLSDLLGAWVRLMKPRRTDWLSVLRQLKKMEHPLYFEVAELALLEESFEANVRDYTKVI 180

Query: 181 HYYGKRNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEP 240
           H YGK NQ+++AE ILL+MR+RGF  DQ+TLT MI +Y KA  L  A++TFEELKLL  P
Sbjct: 181 HCYGKENQIQNAENILLAMRKRGFVIDQVTLTAMISMYGKAGNLKQAEETFEELKLLGYP 240

Query: 241 LDRRSYDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRV 300
           LD+RSY AMIM  IRAGMPE+GE +L+EMD ++I AGSEVYKALLRAYSM  NA+GAQRV
Sbjct: 241 LDKRSYGAMIMTHIRAGMPEKGEVLLREMDAQEICAGSEVYKALLRAYSMVGNADGAQRV 300

Query: 301 FDAIQLAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEK 360
           FDAIQ A IPPD KLCGLLINAY MA +S+KAQIAF+NMRRAGLEPSDKCIAL+L+AYEK
Sbjct: 301 FDAIQFAGIPPDVKLCGLLINAYQMAGESRKAQIAFENMRRAGLEPSDKCIALLLAAYEK 360

Query: 361 ENRLNAALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREY 405
           EN LN AL  L+ LE+E ++VGKEASE+LA W +RLGV++EVELVLREY
Sbjct: 361 ENNLNEALNFLMRLEREGIMVGKEASEILACWFRRLGVLKEVELVLREY 402

[Close]

BLAST of CmoCh14G020420 vs. TAIR10
Match: AT1G01970.1 (AT1G01970.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 443.0 bits (1138), Expect = 2.1e-124
Identity = 217/364 (59.62%), Postives = 289/364 (79.40%), Query Frame = 1


Query: 46  RRCYQLCAVAAIVEEVHKLESGREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVM 105
           R C   C  +  + EV + E   +   F W +VG ++TE Q +AI+++P KM+KRC+A+M
Sbjct: 43  RLCSCKCNASLAIGEVVEKEDAEQSRSFNWADVGLNLTEEQDEAITRIPIKMSKRCQALM 102

Query: 106 KQIICFSPQNGNLSDMLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFE 165
           +QIICFSP+ G+  D+L AW+R M P RADWLS+LK L+ LD P YI+VAE +L++ +FE
Sbjct: 103 RQIICFSPEKGSFCDLLGAWLRRMNPIRADWLSILKELKNLDSPFYIKVAEFSLLQDSFE 162

Query: 166 ASTRDYTKIIHYYGKRNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQT 225
           A+ RDYTKIIHYYGK NQ+EDAER LLSM+ RGF  DQ+TLT M+ +YSKA    LA++T
Sbjct: 163 ANARDYTKIIHYYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEET 222

Query: 226 FEELKLLEEPLDRRSYDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSM 285
           F E+KLL EPLD RSY +MIMA+IRAG+PE+GE++L+EMD ++I AG EVYKALLR YSM
Sbjct: 223 FNEIKLLGEPLDYRSYGSMIMAYIRAGVPEKGESLLREMDSQEICAGREVYKALLRDYSM 282

Query: 286 ASNAEGAQRVFDAIQLAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKC 345
             +AEGA+RVFDA+Q+A I PD KLCGLLINAY ++ QSQ A++AF+NMR+AG++ +DKC
Sbjct: 283 GGDAEGAKRVFDAVQIAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDKC 342

Query: 346 IALVLSAYEKENRLNAALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYA 405
           +ALVL+AYEKE +LN AL  L++LEK+ +++GKEAS VLA W K+LGVVEEVEL+LRE++
Sbjct: 343 VALVLAAYEKEEKLNEALGFLVELEKDSIMLGKEASAVLAQWFKKLGVVEEVELLLREFS 402

Query: 406 VKEA 410
             ++
Sbjct: 403 SSQS 406

[Close]

BLAST of CmoCh14G020420 vs. TAIR10
Match: AT1G19520.1 (AT1G19520.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 237.7 bits (605), Expect = 1.3e-62
Identity = 127/329 (38.60%), Postives = 198/329 (60.18%), Query Frame = 1


Query: 74  RWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSDMLAAWVRIMKPKR 133
           +W+E+   I E +++A  + P  +T +CK VM+++     +  + S +LA W  +++P R
Sbjct: 291 KWVEMADKIHEAEEEADWREPKPVTGKCKLVMEKLESLQ-EGDDPSGLLAEWAELLEPNR 350

Query: 134 ADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGKRNQLEDAERILLS 193
            DW++++  LR  +   Y++VAE  L E++F AS  DY+K+IH + K N +ED ERIL  
Sbjct: 351 VDWIALINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKK 410

Query: 194 MRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRSYDAMIMAFIRAGM 253
           M + G   D +T T ++H+YSK+     A + FE LK      D + Y+AMI+ ++ AG 
Sbjct: 411 MSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGK 470

Query: 254 PEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQLAAIPP-DDKLCG 313
           P+ GE ++KEM  K++ A  EVY ALLRAY+   +A GA  +  ++Q A+  P   +   
Sbjct: 471 PKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYS 530

Query: 314 LLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELLIDLEKE 373
           L + AY  A Q  KA+  FD MR+ G +P DKCIA ++ AY+ EN L+ AL LL+ LEK+
Sbjct: 531 LFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKD 590

Query: 374 KLVVGKEASEVLAAWLKRLGVVEEVELVL 402
            + +G     VL  W+  LG++EE E +L
Sbjct: 591 GIEIGVITYTVLVDWMANLGLIEEAEQLL 618

[Close]

BLAST of CmoCh14G020420 vs. TAIR10
Match: AT2G35130.2 (AT2G35130.2 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-14
Identity = 55/224 (24.55%), Postives = 105/224 (46.88%), Query Frame = 1


Query: 180 KRNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRR 239
           ++   E+A  +   M+         T   MI++Y KA +  ++ + + E++  +   +  
Sbjct: 263 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 322

Query: 240 SYDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAI 299
           +Y A++ AF R G+ E+ E I +++ E  +     VY AL+ +YS A    GA  +F  +
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382

Query: 300 QLAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRL 359
           Q     PD     ++++AY  A     A+  F+ M+R G+ P+ K   L+LSAY K   +
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 442

Query: 360 NAALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLRE 404
                ++ ++ +  +         +     RLG   ++E +L E
Sbjct: 443 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 486

[Close]

BLAST of CmoCh14G020420 vs. TAIR10
Match: AT2G18940.1 (AT2G18940.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-14
Identity = 63/234 (26.92%), Postives = 109/234 (46.58%), Query Frame = 1


Query: 171 YTKIIHYYGKRNQL-EDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEEL 230
           Y  I+  +GK  +       +L  MR +G   D+ T +T++   ++   L  AK+ F EL
Sbjct: 248 YNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL 307

Query: 231 KLLEEPLDRRSYDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNA 290
           K         +Y+A++  F +AG+  E  ++LKEM+E    A S  Y  L+ AY  A  +
Sbjct: 308 KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFS 367

Query: 291 EGAQRVFDAIQLAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALV 350
           + A  V + +    + P+      +I+AY  A +  +A   F +M+ AG  P+      V
Sbjct: 368 KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427

Query: 351 LSAYEKENRLNAALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLRE 404
           LS   K++R N  +++L D++       +     + A     G+ + V  V RE
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFRE 481

[Close]

BLAST of CmoCh14G020420 vs. TAIR10
Match: AT5G42310.1 (AT5G42310.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 2.5e-13
Identity = 52/225 (23.11%), Postives = 105/225 (46.67%), Query Frame = 1


Query: 129 MKPKRADWLSVLK-HLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGKRNQLEDA 188
           ++P R  W +++  H +   H +  E+ EA         +T  Y  +I+ YG + + +D 
Sbjct: 475 IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATT-YNIMINSYGDQERWDDM 534

Query: 189 ERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRSYDAMIMA 248
           +R+L  M+ +G   + +T TT++ +Y K+   + A +  EE+K +        Y+A+I A
Sbjct: 535 KRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINA 594

Query: 249 FIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQLAAIPPD 308
           + + G+ E+  N  + M    +        +L+ A+        A  V   ++   + PD
Sbjct: 595 YAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPD 654

Query: 309 DKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSA 353
                 L+ A +  D+ QK  + ++ M  +G +P  K  +++ SA
Sbjct: 655 VVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSA 698

[Close]

BLAST of CmoCh14G020420 vs. NCBI nr
Match: gi|449433119|ref|XP_004134345.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Cucumis sativus])

HSP 1 Score: 644.4 bits (1661), Expect = 1.3e-181
Identity = 330/410 (80.49%), Postives = 365/410 (89.02%), Query Frame = 1


Query: 1   METSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLCAVAAIVEE 60
           M+ S  NILYQ+H   PLVNGT+ +SYS Y R        VLS RRRC Q+    AIV+E
Sbjct: 1   MQISTSNILYQLH--LPLVNGTSNTSYSRYWRDSI-----VLSSRRRCSQMATATAIVDE 60

Query: 61  VHKLESGREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSD 120
           +HKLES REKPRFRW+EVG DITE QKQAISQLPPKMTKRCKAVMKQIICFSPQ G LSD
Sbjct: 61  IHKLESEREKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSD 120

Query: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180
           MLAAWVRIMKP+RADWL VLKHLRIL+HPLYI+VAEAAL E TFEA+TRDYTKIIH+YGK
Sbjct: 121 MLAAWVRIMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGK 180

Query: 181 RNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRS 240
           +NQLEDAE++LLSMRERGF CDQITLTTMIHIYSKAD+L+LAKQTFEELKLLE+PLD+RS
Sbjct: 181 QNQLEDAEKVLLSMRERGFVCDQITLTTMIHIYSKADKLNLAKQTFEELKLLEQPLDKRS 240

Query: 241 YDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQ 300
           + AMIMA++RAG PEEGE ILKEMD KDIYAGSEVYKALLRAYSM  NAEGAQRVFDAIQ
Sbjct: 241 FGAMIMAYVRAGFPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMVGNAEGAQRVFDAIQ 300

Query: 301 LAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360
           LAAI PD+KLCGLLINAYLMA QS++AQIAFDNMRRAG+EPSDKCIAL LSAYEKENRLN
Sbjct: 301 LAAITPDEKLCGLLINAYLMAGQSREAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLN 360

Query: 361 AALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEAS 411
           +ALELLIDLEK+ ++VGKEAS++LAAWLKRLGVVEEVE+VLREY  KE +
Sbjct: 361 SALELLIDLEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEVN 403

[Close]

BLAST of CmoCh14G020420 vs. NCBI nr
Match: gi|659075451|ref|XP_008438151.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Cucumis melo])

HSP 1 Score: 644.4 bits (1661), Expect = 1.3e-181
Identity = 329/410 (80.24%), Postives = 368/410 (89.76%), Query Frame = 1


Query: 1   METSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLCAVAAIVEE 60
           M  S  NILYQ+H   PLVNGT+ +S S Y +        VL+ RRRC Q+  V AIV+E
Sbjct: 1   MHISTSNILYQLH--LPLVNGTSNTSSSRYWKDSI-----VLNSRRRCSQMATVTAIVDE 60

Query: 61  VHKLESGREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSD 120
           +HKLES REKPRFRW+EVG +ITE QKQAISQLPPKMTK+CKAVMKQIICFSPQ G LSD
Sbjct: 61  LHKLESEREKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSD 120

Query: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180
           MLAAWVRIMKP+RADWLSVLKHLRIL+HPLYI+VAEAALVE TFEA+TRDYTKIIH+YGK
Sbjct: 121 MLAAWVRIMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGK 180

Query: 181 RNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRS 240
           +NQLEDAE++LL+MRERGFACDQITLTTMIHIYSKAD+L LAKQTFEELKLLE+ LD+RS
Sbjct: 181 QNQLEDAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRS 240

Query: 241 YDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQ 300
           Y AMIMA++RAG+PEEGE ILKEMD KDIYAGSEVYKALLRAYSMA +AEGAQRVFDAIQ
Sbjct: 241 YGAMIMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQ 300

Query: 301 LAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360
           LAAIPPD+KLCGLL+NAYLMA QS+KAQIAFDNMRRAG+EPSDKCIAL LSAYEKENRLN
Sbjct: 301 LAAIPPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLN 360

Query: 361 AALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEAS 411
           AALELLIDLEK+ ++VGKEAS++LAAWLKRLGVVEE+E+VLREY  KE +
Sbjct: 361 AALELLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVN 403

[Close]

BLAST of CmoCh14G020420 vs. NCBI nr
Match: gi|590722924|ref|XP_007052035.1| (Tetratricopeptide repeat (TPR)-like superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 500.0 bits (1286), Expect = 4.0e-138
Identity = 250/417 (59.95%), Postives = 325/417 (77.94%), Query Frame = 1


Query: 1   METSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLCAV------ 60
           M TS CNI Y  +   P +N T +  +    +    R   +   +   +  C V      
Sbjct: 1   MVTSACNIPYCSYSTYPFINKTKKQIHP---QSWGNRNPLLFQKKGAKFSSCKVNNQPEI 60

Query: 61  -AAIVEEVHKLESGREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSP 120
            ++ VEE  K E+  EK R++W+E+G DI E QKQAI++LP KMTKRCKA+MKQIICF P
Sbjct: 61  ASSNVEEKGKPETNEEKRRYKWVEIGPDIAEEQKQAITELPFKMTKRCKALMKQIICFCP 120

Query: 121 QNGNLSDMLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTK 180
           + G+L+D+LAAWV+IMKP+RADWL VLK L+I++HPLY EVAE AL+E +FEA+ RD+TK
Sbjct: 121 EKGSLADLLAAWVKIMKPRRADWLVVLKELKIMEHPLYFEVAELALLEESFEANIRDFTK 180

Query: 181 IIHYYGKRNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLE 240
           IIH YGK+ +L++AE IL++M+ RGF CDQ+TLTTM+H+YSKA  L LA++TFEE+KLL 
Sbjct: 181 IIHGYGKQKRLQEAENILVAMKRRGFICDQVTLTTMVHMYSKAGNLKLAEETFEEIKLLG 240

Query: 241 EPLDRRSYDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQ 300
           + LD+RSY +MIMA+IR+G PE+GE +L+EMD ++IYAGSEVYKALLRAYSM  +A GAQ
Sbjct: 241 QQLDKRSYGSMIMAYIRSGTPEQGEALLREMDSQEIYAGSEVYKALLRAYSMLGDANGAQ 300

Query: 301 RVFDAIQLAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAY 360
           RVFD IQLA I PD ++CGLLINAY +A QS KA IAF+NMRRAGLEPSDKC+ALV++AY
Sbjct: 301 RVFDTIQLAGISPDARMCGLLINAYQLAGQSDKAHIAFENMRRAGLEPSDKCVALVVAAY 360

Query: 361 EKENRLNAALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEAS 411
           EK+N+LN AL+ L++LE++ +VVGKEAS +LA W K+LGVVE+VELVLRE+A KE +
Sbjct: 361 EKQNKLNKALDFLMELERDGIVVGKEASGILAQWFKKLGVVEQVELVLREFAAKETN 414

[Close]

BLAST of CmoCh14G020420 vs. NCBI nr
Match: gi|703085829|ref|XP_010092845.1| (hypothetical protein L484_022440 [Morus notabilis])

HSP 1 Score: 498.8 bits (1283), Expect = 9.0e-138
Identity = 245/357 (68.63%), Postives = 304/357 (85.15%), Query Frame = 1


Query: 54  VAAIVEEVHKLESGREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSP 113
           VA  VEE  K E+G  KP+F+W+EVG  ITE QK+AISQL PKMTKRC+A+MKQ+ICFS 
Sbjct: 44  VATSVEETEKAENGGGKPKFKWVEVGPGITESQKEAISQLSPKMTKRCRALMKQLICFSA 103

Query: 114 QNGNLSDMLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTK 173
              +L+++LAAWVRIMKP+RADWL+++K L+I+DHPLY +VAE AL+E +FEA+ RDYTK
Sbjct: 104 HKASLNELLAAWVRIMKPQRADWLAIIKQLKIMDHPLYFQVAEVALLEESFEANIRDYTK 163

Query: 174 IIHYYGKRNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLE 233
           IIH YGK+N+LEDAE+ LL+M+ RGF  DQ+TLTT IH+YSKA  L LA++TFEELKLL 
Sbjct: 164 IIHCYGKQNRLEDAEKTLLAMKSRGFIRDQVTLTTFIHMYSKAGNLKLAEETFEELKLLG 223

Query: 234 EPLDRRSYDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQ 293
           +PLD+RSY +MIMA+IRAGMP++GENIL+EMD ++IYAGSEVYKALLRAYSM  +AEGAQ
Sbjct: 224 QPLDKRSYGSMIMAYIRAGMPDQGENILREMDVEEIYAGSEVYKALLRAYSMTGDAEGAQ 283

Query: 294 RVFDAIQLAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAY 353
           RVFDAIQLA I PD +LCGLLINAY+ + QS+KA +AF NMRRAGLEPSDKC+ALVL AY
Sbjct: 284 RVFDAIQLAGILPDPRLCGLLINAYVESGQSEKACVAFGNMRRAGLEPSDKCVALVLCAY 343

Query: 354 EKENRLNAALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEAS 411
           EKEN+L  AL+ L++LE+  ++VG+EASE L  W ++LGVV+EV+LVLREYA K AS
Sbjct: 344 EKENKLQRALDFLMELERHGIMVGEEASETLVGWFRKLGVVKEVDLVLREYASKGAS 400

[Close]

BLAST of CmoCh14G020420 vs. NCBI nr
Match: gi|224130012|ref|XP_002320730.1| (hypothetical protein POPTR_0014s06610g [Populus trichocarpa])

HSP 1 Score: 489.2 bits (1258), Expect = 7.1e-135
Identity = 252/405 (62.22%), Postives = 315/405 (77.78%), Query Frame = 1


Query: 1   METSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLCAVAAIVEE 60
           M T V NIL    P  PL +   ++S   +      ++   L+  +   Q    A  VEE
Sbjct: 1   MATYVINILPFSSPTCPLHSEPKKTSNLHFLGNSLCQQPVTLTSCKSQIQPVLAAINVEE 60

Query: 61  VHKLESGREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSD 120
             + E G+EKP+FRW+E+G +I E QKQAISQLP KMTKRCKA+M+QIICF+ + G+L  
Sbjct: 61  KVEGEIGKEKPKFRWVEIGPNIPEEQKQAISQLPFKMTKRCKALMRQIICFNDKKGSLRG 120

Query: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180
           +L+AWV+IMKP+R DWLS+LK L  ++HPLY+EV E AL+E +FEA+ RDYTKIIH+YG 
Sbjct: 121 LLSAWVKIMKPRRKDWLSILKELNKMEHPLYLEVVEIALLEESFEANVRDYTKIIHFYGM 180

Query: 181 RNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRS 240
            NQLE+AER  L+M ERGF  DQ+TLT MIH+YSK   L+LA++TFEELKLL +PLDRRS
Sbjct: 181 NNQLEEAERTRLAMEERGFVSDQVTLTAMIHMYSKGGNLTLAEETFEELKLLGQPLDRRS 240

Query: 241 YDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQ 300
           Y +MIMA+IRAGMPE+GE IL+EMD ++I AGSEVYKALLRAYS+  +A+GAQRVFDAIQ
Sbjct: 241 YGSMIMAYIRAGMPEKGEMILREMDAQEIRAGSEVYKALLRAYSIIGDADGAQRVFDAIQ 300

Query: 301 LAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360
           LA IPPDD+ C +L+NAY MA QSQ A   F+NM RAG+EP+D+C+ALVL+AYEKEN+LN
Sbjct: 301 LAGIPPDDRTCAVLLNAYGMAGQSQNAYATFENMWRAGIEPTDRCVALVLAAYEKENKLN 360

Query: 361 AALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYA 406
            AL+ LI LE+EKL++GKEASEVLA W  RLGVV+EVELVLREYA
Sbjct: 361 QALDFLIGLEREKLIIGKEASEVLAEWFGRLGVVKEVELVLREYA 405

The following BLAST results are available for this feature:

BLAST of CmoCh14G020420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PPR1_ARATH	3.7e-123	59.62	Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana GN...	[more]
PPR51_ARATH	2.9e-35	40.19	Pentatricopeptide repeat-containing protein At1g19525 OS=Arabidopsis thaliana GN...	[more]
PP186_ARATH	1.8e-13	24.55	Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana GN...	[more]
PP163_ARATH	2.4e-13	26.92	Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop...	[more]
PP413_ARATH	4.5e-12	23.11	Pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Arabidop...	[more]

BLAST of CmoCh14G020420 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7L8_CUCSA	9.2e-182	80.49	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126080 PE=4 SV=1	[more]
A0A061DV02_THECC	2.8e-138	59.95	Tetratricopeptide repeat (TPR)-like superfamily protein, putative OS=Theobroma c...	[more]
W9QSE5_9ROSA	6.2e-138	68.63	Uncharacterized protein OS=Morus notabilis GN=L484_022440 PE=4 SV=1	[more]
B9IC06_POPTR	4.9e-135	62.22	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s06610g PE=4 SV=1	[more]
A0A067K157_JATCU	1.9e-134	61.86	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14514 PE=4 SV=1	[more]

BLAST of CmoCh14G020420 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G01970.1	2.1e-124	59.62	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G19520.1	1.3e-62	38.60	pentatricopeptide (PPR) repeat-containing protein	[more]
AT2G35130.2	1.0e-14	24.55	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G18940.1	1.3e-14	26.92	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G42310.1	2.5e-13	23.11	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

BLAST of CmoCh14G020420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449433119\|ref\|XP_004134345.1\|	1.3e-181	80.49	PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Cucumis sativu...	[more]
gi\|659075451\|ref\|XP_008438151.1\|	1.3e-181	80.24	PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Cucumis melo]	[more]
gi\|590722924\|ref\|XP_007052035.1\|	4.0e-138	59.95	Tetratricopeptide repeat (TPR)-like superfamily protein, putative [Theobroma cac...	[more]
gi\|703085829\|ref\|XP_010092845.1\|	9.0e-138	68.63	hypothetical protein L484_022440 [Morus notabilis]	[more]
gi\|224130012\|ref\|XP_002320730.1\|	7.1e-135	62.22	hypothetical protein POPTR_0014s06610g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G020420.1	CmoCh14G020420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 240..269 score: 1.
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 171..213 score: 2.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 171..202 score: 4.5E-6coord: 240..270 score: 4.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 167..201 score: 9.262coord: 237..271 score: 10.271coord: 202..236 score: 7.498coord: 342..376 score: 6.171coord: 307..341 score: 8.692coord: 272..306 score: 7
None	No IPR available	unknown	Coil	Coil	coord: 352..372 scor
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 69..403 score: 6.7E
None	No IPR available	PANTHER	PTHR24015:SF457	SUBFAMILY NOT NAMED	coord: 69..403 score: 6.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh14G020420	CmaCh14G019800	Cucurbita maxima (Rimu)	cmacmoB245
CmoCh14G020420	Cla021304	Watermelon (97103) v1	cmowmB231
CmoCh14G020420	ClCG05G002180	Watermelon (Charleston Gray)	cmowcgB219
CmoCh14G020420	Lsi05G019650	Bottle gourd (USVL1VR-Ls)	cmolsiB233
CmoCh14G020420	Cp4.1LG03g17120	Cucurbita pepo (Zucchini)	cmocpeB245
CmoCh14G020420	Cla97C05G082700	Watermelon (97103) v2	cmowmbB243

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh14G020420	Watermelon (97103) v2	cmowmbB228
CmoCh14G020420	Watermelon (97103) v2	cmowmbB249
CmoCh14G020420	Wax gourd	cmowgoB0294
CmoCh14G020420	Wax gourd	cmowgoB0308
CmoCh14G020420	Cucurbita moschata (Rifu)	cmocmoB198
CmoCh14G020420	Cucurbita moschata (Rifu)	cmocmoB224
CmoCh14G020420	Cucurbita moschata (Rifu)	cmocmoB235
CmoCh14G020420	Cucumber (Gy14) v1	cgycmoB0700
CmoCh14G020420	Cucumber (Gy14) v1	cgycmoB0823
CmoCh14G020420	Cucumber (Gy14) v1	cgycmoB0992
CmoCh14G020420	Cucurbita maxima (Rimu)	cmacmoB350
CmoCh14G020420	Cucurbita maxima (Rimu)	cmacmoB797
CmoCh14G020420	Cucurbita maxima (Rimu)	cmacmoB885
CmoCh14G020420	Wild cucumber (PI 183967)	cmocpiB243
CmoCh14G020420	Wild cucumber (PI 183967)	cmocpiB258
CmoCh14G020420	Wild cucumber (PI 183967)	cmocpiB263
CmoCh14G020420	Cucumber (Chinese Long) v2	cmocuB239
CmoCh14G020420	Cucumber (Chinese Long) v2	cmocuB257
CmoCh14G020420	Melon (DHL92) v3.5.1	cmomeB197
CmoCh14G020420	Melon (DHL92) v3.5.1	cmomeB199
CmoCh14G020420	Melon (DHL92) v3.5.1	cmomeB230
CmoCh14G020420	Watermelon (Charleston Gray)	cmowcgB225
CmoCh14G020420	Watermelon (97103) v1	cmowmB235
CmoCh14G020420	Watermelon (97103) v1	cmowmB241
CmoCh14G020420	Cucurbita pepo (Zucchini)	cmocpeB223
CmoCh14G020420	Cucurbita pepo (Zucchini)	cmocpeB254
CmoCh14G020420	Bottle gourd (USVL1VR-Ls)	cmolsiB211
CmoCh14G020420	Cucumber (Gy14) v2	cgybcmoB290
CmoCh14G020420	Cucumber (Gy14) v2	cgybcmoB571
CmoCh14G020420	Cucumber (Gy14) v2	cgybcmoB717
CmoCh14G020420	Melon (DHL92) v3.6.1	cmomedB221
CmoCh14G020420	Melon (DHL92) v3.6.1	cmomedB260
CmoCh14G020420	Silver-seed gourd	carcmoB0319
CmoCh14G020420	Silver-seed gourd	carcmoB0659
CmoCh14G020420	Silver-seed gourd	carcmoB0850
CmoCh14G020420	Cucumber (Chinese Long) v3	cmocucB0283
CmoCh14G020420	Cucumber (Chinese Long) v3	cmocucB0299
CmoCh14G020420	Cucumber (Chinese Long) v3	cmocucB0308