CmoCh14G020150 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGAGAAAGCTGAAGCCATTACTGCCATTTACAAAGTAAACCTTCATTGCCAACAATGTTGGAGAGAGATCAAAAGGCCTCTTGCTAGAACACAAGGTAAAGTTCACTATTTTCTTCATGGGTTTCAAATTTCTTTGGTTTTTTCGTTCATTTTCTTGCCAACCAAACACAATTATGTTCGATGATGAAAGTCCCACCTCAGCTAATTTAGAGAATGATCATGGATTTATAACCAAATAATACTATCTCTATTAGTACGAGGTTTTCTCGAAATGATCATGGATTTATAATCAAATAATACTATCTCTATTGGTACGAGGCCTTTTGAGGAGCACAAAGTAAAACTATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTATAAATAGTCGTGTTTACAAAAATAAAAATAAAATAAAAAGACATTTTTTTGTTCATCTCCAAAAAAACGATCCCCACTCCTCTCTCCACTTTGATCGATCTACTCCGATATGGAACAACTCATTCATGTTAAAAATAAAAAAATAAATTATTATTAAATTACAAGTTTAGTCCCTAAACTTTTTTTTTTCTTTTTTTAAACTGCTTCAACTAAGGCTCATGAACTTAATGTCTTATAAGTCTCTGAACTCTAAAAATATATAATTTGTAAACTATCAATTTTTTAAAATATATTGGATAGATCAAACGCCTATTAACCACAAAATTGAAAGTTCAATAATCTATTCGACGTTTTTTAAAGTTCAAGAATCAAATAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCGACTTTAATTTAATTATTAACCTTTTTTTTAATTTCATATTAGGGATTCATAATGTTGAAGTTGATATGGAGAAAAATGAAATTAGGGTGAAAGGTTCCAATTTGGATGTGCTCAAAATTCACAAGCAAATAGAGAAATTGAGCAAGAAAAGGGTTGACTTAATTTCTCCCAAAGTCAAGCCCAAGGAGAAAGAAACTCCTAAACCCAACGACAACAAACCCAAGCCAAGCCTCGTGAGTATAATTTCATTATTTATCAATTAAATATTTATTTACATATTTATTACATCATAAATATATTTAGTATATATATATATGTTAAATTAAATTAAATATATTATTTTCCACTTGGCAGATTCAACGCACAATAACAGCTAAGGTTCACTTGCACTGCGCCAAATGCGAGAAAGACCTCAAGAACAATTTGCTAAAGCATAAAGGTCTTTTATTTTATTTTTCATCTCTATATGTTATTCAAACCATTTTTAAGTTAGAAAATTCAAAAAAAAAAAAAAAAAAAAATCTCTATTTTAATTTGAACCCTAAACTTTTAAATATTGTGATTTAGTCCTCAAATTTCGTCTTTTGATCCGTTTATAAAATTAGAAAATAAATTCTACTCAATTTTTTATAATAAATCTTAAAATAATTTTAAAAATTCAAGGACTAAAATGAAATTTTGTAATGTTTAAGATCTAATTTAAAATGGACAAATTTAATAATTATTTTAAACTATTTTTAAATGTTTTTTTTTCTTTTTGTCTAATTTAAACCTAATTTAATAAATTTAATAATATGTCTAATTTTGAGATTCATGACAAAGTTGGGATTAAAATTAAATTTTTAAAAAGTATATCGACTAAAATAGAATAAATTTAAAATACGAGGACCATAATGATATTTTAACGAACAAAAATACTATTTTTTTAAATTATAAAAACAGCCCAAAAAGTTATGAAAAACACAAAAACTTCCCATTTGAAGGACAAATAATTTGAATATTTGCAGGAATATATAATGTGAAAACAGACATGAAAGCTCAAACCCTAACAATGGAAGGAACCATAGAACCAGAGAAGTTCAAGTCTTATCTGAAGAAGAAGCTGCAGAAACACGCTGACATTACTACGGCGGTCGATTCATCGAAGCCACCGGAGAAGAAGAAAGAAAGTAGTGAGCAAAAAGAGAAGCCTAAAGAAAAATCTTCATCCGAGACGACGACGACGACAACGACCAAGATAGTTGCAGAGATTCAAACCAAAGATACCGATAATAATAAAAATAACGCTCCTTATTTCGTTCACTACGTTTACGCTCCTCAATTGTTTAGCGACGAAAATCCAAATGCATGTCAAGTAATGTAA ATGGGAGAGAAAGCTGAAGCCATTACTGCCATTTACAAAGTAAACCTTCATTGCCAACAATGTTGGAGAGAGATCAAAAGGCCTCTTGCTAGAACACAAGGGATTCATAATGTTGAAGTTGATATGGAGAAAAATGAAATTAGGGTGAAAGGTTCCAATTTGGATGTGCTCAAAATTCACAAGCAAATAGAGAAATTGAGCAAGAAAAGGGTTGACTTAATTTCTCCCAAAGTCAAGCCCAAGGAGAAAGAAACTCCTAAACCCAACGACAACAAACCCAAGCCAAGCCTCATTCAACGCACAATAACAGCTAAGGTTCACTTGCACTGCGCCAAATGCGAGAAAGACCTCAAGAACAATTTGCTAAAGCATAAAGGAATATATAATGTGAAAACAGACATGAAAGCTCAAACCCTAACAATGGAAGGAACCATAGAACCAGAGAAGTTCAAGTCTTATCTGAAGAAGAAGCTGCAGAAACACGCTGACATTACTACGGCGGTCGATTCATCGAAGCCACCGGAGAAGAAGAAAGAAAGTAGTGAGCAAAAAGAGAAGCCTAAAGAAAAATCTTCATCCGAGACGACGACGACGACAACGACCAAGATAGTTGCAGAGATTCAAACCAAAGATACCGATAATAATAAAAATAACGCTCCTTATTTCGTTCACTACGTTTACGCTCCTCAATTGTTTAGCGACGAAAATCCAAATGCATGTCAAGTAATGTAA ATGGGAGAGAAAGCTGAAGCCATTACTGCCATTTACAAAGTAAACCTTCATTGCCAACAATGTTGGAGAGAGATCAAAAGGCCTCTTGCTAGAACACAAGGGATTCATAATGTTGAAGTTGATATGGAGAAAAATGAAATTAGGGTGAAAGGTTCCAATTTGGATGTGCTCAAAATTCACAAGCAAATAGAGAAATTGAGCAAGAAAAGGGTTGACTTAATTTCTCCCAAAGTCAAGCCCAAGGAGAAAGAAACTCCTAAACCCAACGACAACAAACCCAAGCCAAGCCTCATTCAACGCACAATAACAGCTAAGGTTCACTTGCACTGCGCCAAATGCGAGAAAGACCTCAAGAACAATTTGCTAAAGCATAAAGGAATATATAATGTGAAAACAGACATGAAAGCTCAAACCCTAACAATGGAAGGAACCATAGAACCAGAGAAGTTCAAGTCTTATCTGAAGAAGAAGCTGCAGAAACACGCTGACATTACTACGGCGGTCGATTCATCGAAGCCACCGGAGAAGAAGAAAGAAAGTAGTGAGCAAAAAGAGAAGCCTAAAGAAAAATCTTCATCCGAGACGACGACGACGACAACGACCAAGATAGTTGCAGAGATTCAAACCAAAGATACCGATAATAATAAAAATAACGCTCCTTATTTCGTTCACTACGTTTACGCTCCTCAATTGTTTAGCGACGAAAATCCAAATGCATGTCAAGTAATGTAA
BLAST of CmoCh14G020150 vs. Swiss-Prot
Match: HIP3_ARATH (Heavy metal-associated isoprenylated plant protein 3 OS=Arabidopsis thaliana GN=HIPP3 PE=1 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.7e-17 Identity = 76/268 (28.36%), Postives = 131/268 (48.88%), Query Frame = 1
BLAST of CmoCh14G020150 vs. TrEMBL
Match: A0A0A0L4G4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127060 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 1.4e-73 Identity = 161/218 (73.85%), Postives = 182/218 (83.49%), Query Frame = 1
BLAST of CmoCh14G020150 vs. TrEMBL
Match: B9SKJ8_RICCO (Metal ion binding protein, putative OS=Ricinus communis GN=RCOM_0659680 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 3.2e-57 Identity = 129/242 (53.31%), Postives = 172/242 (71.07%), Query Frame = 1
BLAST of CmoCh14G020150 vs. TrEMBL
Match: A0A061FTM9_THECC (Metal ion binding protein, putative OS=Theobroma cacao GN=TCM_011949 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 4.2e-57 Identity = 129/236 (54.66%), Postives = 172/236 (72.88%), Query Frame = 1
BLAST of CmoCh14G020150 vs. TrEMBL
Match: V4MQL6_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10009467mg PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 1.8e-55 Identity = 136/273 (49.82%), Postives = 177/273 (64.84%), Query Frame = 1
BLAST of CmoCh14G020150 vs. TrEMBL
Match: A0A059CE78_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01129 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 2.3e-55 Identity = 121/253 (47.83%), Postives = 174/253 (68.77%), Query Frame = 1
BLAST of CmoCh14G020150 vs. TAIR10
Match: AT1G29000.1 (AT1G29000.1 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 214.2 bits (544), Expect = 9.2e-56 Identity = 128/276 (46.38%), Postives = 173/276 (62.68%), Query Frame = 1
BLAST of CmoCh14G020150 vs. TAIR10
Match: AT5G50740.3 (AT5G50740.3 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 129.4 bits (324), Expect = 3.0e-30 Identity = 86/266 (32.33%), Postives = 142/266 (53.38%), Query Frame = 1
BLAST of CmoCh14G020150 vs. TAIR10
Match: AT5G63530.1 (AT5G63530.1 farnesylated protein 3) HSP 1 Score: 112.1 bits (279), Expect = 4.9e-25 Identity = 81/282 (28.72%), Postives = 140/282 (49.65%), Query Frame = 1
BLAST of CmoCh14G020150 vs. TAIR10
Match: AT3G02960.1 (AT3G02960.1 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 95.9 bits (237), Expect = 3.6e-20 Identity = 64/244 (26.23%), Postives = 120/244 (49.18%), Query Frame = 1
BLAST of CmoCh14G020150 vs. TAIR10
Match: AT5G60800.2 (AT5G60800.2 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 89.0 bits (219), Expect = 4.5e-18 Identity = 78/268 (29.10%), Postives = 133/268 (49.63%), Query Frame = 1
BLAST of CmoCh14G020150 vs. NCBI nr
Match: gi|449433137|ref|XP_004134354.1| (PREDICTED: uncharacterized protein PF11_0207 [Cucumis sativus]) HSP 1 Score: 350.9 bits (899), Expect = 1.8e-93 Identity = 190/257 (73.93%), Postives = 216/257 (84.05%), Query Frame = 1
BLAST of CmoCh14G020150 vs. NCBI nr
Match: gi|659075593|ref|XP_008438227.1| (PREDICTED: uncharacterized protein DDB_G0286299 [Cucumis melo]) HSP 1 Score: 348.6 bits (893), Expect = 8.9e-93 Identity = 186/259 (71.81%), Postives = 216/259 (83.40%), Query Frame = 1
BLAST of CmoCh14G020150 vs. NCBI nr
Match: gi|700201510|gb|KGN56643.1| (hypothetical protein Csa_3G127060 [Cucumis sativus]) HSP 1 Score: 284.3 bits (726), Expect = 2.1e-73 Identity = 161/218 (73.85%), Postives = 182/218 (83.49%), Query Frame = 1
BLAST of CmoCh14G020150 vs. NCBI nr
Match: gi|1009110398|ref|XP_015895358.1| (PREDICTED: transcription initiation factor TFIID subunit 3 [Ziziphus jujuba]) HSP 1 Score: 238.4 bits (607), Expect = 1.3e-59 Identity = 144/267 (53.93%), Postives = 182/267 (68.16%), Query Frame = 1
BLAST of CmoCh14G020150 vs. NCBI nr
Match: gi|764630818|ref|XP_011469577.1| (PREDICTED: uncharacterized protein LOC101294110 isoform X2 [Fragaria vesca subsp. vesca]) HSP 1 Score: 236.1 bits (601), Expect = 6.4e-59 Identity = 135/251 (53.78%), Postives = 174/251 (69.32%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |