CmoCh14G019070 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGACGATTCCGGTGCTCGTCCATGCCGGAAAGCCCATCTGCGACTCCATGATCATCCTCCACTACATCGACGAGACTTGACCGGATCAAGTTTATTGAGGATAAGGTATGTTTCCTCTGAAAATCTAATATAGATGTGAAGTTACATTTATACCCTCAATCCTTTAAATTATAAATTCCAGCCAAAAGTGGGCATTGGCGACCTGATTGGTCTGTCAAAACGGGAGACTGAGCGACCTGATTGGTCTGTCAAAATGAGAGACTGAGCGACCTGATTGGTCTGTCAAAACGGGAGACTGACACTCTATGTCAATCAAACCTGGCAAGTTTGTTTTGTTTGCCATCGTCTCGTTTTGGTGTGAGTTTCTTCTGGGTCACTCGTCACTCGCCACCACATTATCCGTCTTGTCTAGAAATCGTGACCCGCTTCCACGAGCTCCCGTTCATAAATTTTCAATTGATATTTAGTTGCTATTTTTAGCAATTTAAATAGATATAATTTTTTTTATAAGATTGGTTGAATAAATCTTTAAAATAATGTTTTTTTTATTTATTTACTAAGGATCTTTAAAAACCTTAAAATAATAATAATAATAAAATTTATGGAAATAAAATTCTAAATTAAATTAAATAATGATAAAAAGAATGGTGCCACTGCCCGGCCAGAATTCCGCCGGGCTTCCTTCAACCGCCAATCCCGGCGGCCGGAATCAACCAGTTTCACTCCCAATGACATGAGTGATAGTGTTGAGAGGGTAAAATTGTATTTTCACTAAAAGTCAAATAGTAAAAAAAAAGACCTTCTAGAGGCTATTTTTCTGAAACTAACGAATAAATTTCGGGCAGATCTCTGTTCTTCGGGGAATGCTTGTGGTTGAAGGGGAAGAAGATAGGGAAAAGGTGAGAAAAGCGAGCTTGGAAGTGCTGCAGACGCTGGAAGAACAGGCGTTCGGCGACAAGAAATTCTTCGCCGGAGATGAAATTAACATGGTGGATTTAGCCTACGGGATTCTCGCGCGGTGGTTGCCGGTGTTCCAAGAGGTCGTCGGTATAAAGGTCTTCGAACCAGATACATTCCCTCGCCTCCATGCTTGGGCGGAGAACTTCCGGCAAGCCGCCGTCATCAGAGACAATCTGCCCGATCACGCCCAGATGGTGCCCCTGTTCAAAATCCGGCGAGAGTACCTACTCCAAACTGCCCGGAAATGA ATGAGACGATTCCGACTTGACCGGATCAAGTTTATTGAGGATAAGATCTCTGTTCTTCGGGGAATGCTTGTGGTTGAAGGGGAAGAAGATAGGGAAAAGGTGAGAAAAGCGAGCTTGGAAGTGCTGCAGACGCTGGAAGAACAGGCGTTCGGCGACAAGAAATTCTTCGCCGGAGATGAAATTAACATGGTGGATTTAGCCTACGGGATTCTCGCGCGGTGGTTGCCGGTGTTCCAAGAGGTCGTCGGTATAAAGGTCTTCGAACCAGATACATTCCCTCGCCTCCATGCTTGGGCGGAGAACTTCCGGCAAGCCGCCGTCATCAGAGACAATCTGCCCGATCACGCCCAGATGGTGCCCCTGTTCAAAATCCGGCGAGAGTACCTACTCCAAACTGCCCGGAAATGA ATGAGACGATTCCGACTTGACCGGATCAAGTTTATTGAGGATAAGATCTCTGTTCTTCGGGGAATGCTTGTGGTTGAAGGGGAAGAAGATAGGGAAAAGGTGAGAAAAGCGAGCTTGGAAGTGCTGCAGACGCTGGAAGAACAGGCGTTCGGCGACAAGAAATTCTTCGCCGGAGATGAAATTAACATGGTGGATTTAGCCTACGGGATTCTCGCGCGGTGGTTGCCGGTGTTCCAAGAGGTCGTCGGTATAAAGGTCTTCGAACCAGATACATTCCCTCGCCTCCATGCTTGGGCGGAGAACTTCCGGCAAGCCGCCGTCATCAGAGACAATCTGCCCGATCACGCCCAGATGGTGCCCCTGTTCAAAATCCGGCGAGAGTACCTACTCCAAACTGCCCGGAAATGA
BLAST of CmoCh14G019070 vs. Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 7.5e-17 Identity = 47/122 (38.52%), Postives = 74/122 (60.66%), Query Frame = 1
BLAST of CmoCh14G019070 vs. Swiss-Prot
Match: GST23_MAIZE (Glutathione transferase GST 23 OS=Zea mays PE=2 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.7e-13 Identity = 46/122 (37.70%), Postives = 64/122 (52.46%), Query Frame = 1
BLAST of CmoCh14G019070 vs. Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2) HSP 1 Score: 58.2 bits (139), Expect = 8.3e-08 Identity = 39/131 (29.77%), Postives = 64/131 (48.85%), Query Frame = 1
BLAST of CmoCh14G019070 vs. Swiss-Prot
Match: GSTUN_ARATH (Glutathione S-transferase U23 OS=Arabidopsis thaliana GN=GSTU23 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07 Identity = 35/120 (29.17%), Postives = 61/120 (50.83%), Query Frame = 1
BLAST of CmoCh14G019070 vs. Swiss-Prot
Match: GSTUC_ARATH (Glutathione S-transferase U12 OS=Arabidopsis thaliana GN=GSTU12 PE=2 SV=2) HSP 1 Score: 52.0 bits (123), Expect = 6.0e-06 Identity = 25/86 (29.07%), Postives = 40/86 (46.51%), Query Frame = 1
BLAST of CmoCh14G019070 vs. TrEMBL
Match: A0A0A0L835_CUCSA (Glutathione S-transferase OS=Cucumis sativus GN=Csa_3G133380 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 1.0e-44 Identity = 89/127 (70.08%), Postives = 106/127 (83.46%), Query Frame = 1
BLAST of CmoCh14G019070 vs. TrEMBL
Match: A0A061ELA1_THECC (Glutathione S-transferase tau 7 OS=Theobroma cacao GN=TCM_020454 PE=3 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 5.0e-28 Identity = 57/122 (46.72%), Postives = 88/122 (72.13%), Query Frame = 1
BLAST of CmoCh14G019070 vs. TrEMBL
Match: A0A067KEE4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12917 PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 8.6e-28 Identity = 64/125 (51.20%), Postives = 86/125 (68.80%), Query Frame = 1
BLAST of CmoCh14G019070 vs. TrEMBL
Match: D2X9R5_POPTR (Tau class glutathione transferase GSTU25 OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 8.6e-28 Identity = 58/109 (53.21%), Postives = 79/109 (72.48%), Query Frame = 1
BLAST of CmoCh14G019070 vs. TrEMBL
Match: A0A061ET20_THECC (Glutathione S-transferase tau 7 OS=Theobroma cacao GN=TCM_046764 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.1e-27 Identity = 58/122 (47.54%), Postives = 86/122 (70.49%), Query Frame = 1
BLAST of CmoCh14G019070 vs. TAIR10
Match: AT1G78320.1 (AT1G78320.1 glutathione S-transferase TAU 23) HSP 1 Score: 57.4 bits (137), Expect = 8.0e-09 Identity = 35/120 (29.17%), Postives = 61/120 (50.83%), Query Frame = 1
BLAST of CmoCh14G019070 vs. TAIR10
Match: AT1G69920.1 (AT1G69920.1 glutathione S-transferase TAU 12) HSP 1 Score: 52.0 bits (123), Expect = 3.4e-07 Identity = 25/86 (29.07%), Postives = 40/86 (46.51%), Query Frame = 1
BLAST of CmoCh14G019070 vs. NCBI nr
Match: gi|778678021|ref|XP_011650902.1| (PREDICTED: probable glutathione S-transferase [Cucumis sativus]) HSP 1 Score: 187.6 bits (475), Expect = 1.5e-44 Identity = 89/127 (70.08%), Postives = 106/127 (83.46%), Query Frame = 1
BLAST of CmoCh14G019070 vs. NCBI nr
Match: gi|659075968|ref|XP_008438428.1| (PREDICTED: probable glutathione S-transferase isoform X3 [Cucumis melo]) HSP 1 Score: 186.4 bits (472), Expect = 3.2e-44 Identity = 88/127 (69.29%), Postives = 106/127 (83.46%), Query Frame = 1
BLAST of CmoCh14G019070 vs. NCBI nr
Match: gi|659075966|ref|XP_008438427.1| (PREDICTED: probable glutathione S-transferase isoform X2 [Cucumis melo]) HSP 1 Score: 186.4 bits (472), Expect = 3.2e-44 Identity = 88/127 (69.29%), Postives = 106/127 (83.46%), Query Frame = 1
BLAST of CmoCh14G019070 vs. NCBI nr
Match: gi|659075964|ref|XP_008438426.1| (PREDICTED: probable glutathione S-transferase isoform X1 [Cucumis melo]) HSP 1 Score: 183.0 bits (463), Expect = 3.6e-43 Identity = 92/128 (71.88%), Postives = 105/128 (82.03%), Query Frame = 1
BLAST of CmoCh14G019070 vs. NCBI nr
Match: gi|659075974|ref|XP_008438431.1| (PREDICTED: probable glutathione S-transferase [Cucumis melo]) HSP 1 Score: 146.0 bits (367), Expect = 4.8e-32 Identity = 70/124 (56.45%), Postives = 96/124 (77.42%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |