CmoCh14G011890 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh14G011890
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTCP transcription factor 5
LocationCmo_Chr14 : 10009759 .. 10010613 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTACAAATTCTAAAGAAGAGAATTCCCCTCCAAAACTAGTAGCTTCATCAAGCTCATCGGCGGCGCTGGCAACGCCATGGCTTAGGTTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACATAGCAAAGTTTGTACCATAAGAGGGCTGCGCGACAGGCGTGTAAGGCTTTCGGTTTCGACTGCAATTCAGCTCTATGATCTTCAGGACCGCCTCGGCCTTAATCAGCCAAGCAAGGTCGTCGACTGGCTGCTCAACGTCGCCAAGGATGAAATCGACGAACTCCCTCCATTGCCAATACCATCTGCAAGCCTCGGCCTTCACTACCAATCTATGCTACCACCTCATATAGCACATAGATCGGAGTTCAAAATCAACTCCGGCATCGACAAGGTCGAAATCGACGACGATGACGAACAAAAGCAACACAAATCCAATTCTAATCCTTCTTCCTTCTCAGCCCTTTTGAACAATGTGTCTGCCCCTCCATTTGGGTTCCATTGGGATCCCTCCTCCTCCTCCTCCTCCTCGTCGTCGTCGTCAACAACAAATCTTCCCTTCTTTACATCTCAAGCTGAGGATCTTCATAACTTCAATCATGTCACCCCTTTGTCACTCTCAACTGGCTCTCAGTTCTTGGAGTTCAACAATCACTTGCACCAAAATTTCTTCATTAACAACTCTTTGAATACACCTCCTCCTATGCACTCAATAACCCACCCCGCTGTTAGGCCTTTTCATTTCAGCATGGCTACCAAATTTGTTGCTCAACATAAGAATAACAATGGAGATCCTGCCAATAAAGAGGACGGCTTCGGTTCTGATGAATGA

mRNA sequence

ATGATTACAAATTCTAAAGAAGAGAATTCCCCTCCAAAACTAGTAGCTTCATCAAGCTCATCGGCGGCGCTGGCAACGCCATGGCTTAGGTTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACATAGCAAAGTTTGTACCATAAGAGGGCTGCGCGACAGGCGTGTAAGGCTTTCGGTTTCGACTGCAATTCAGCTCTATGATCTTCAGGACCGCCTCGGCCTTAATCAGCCAAGCAAGGTCGTCGACTGGCTGCTCAACGTCGCCAAGGATGAAATCGACGAACTCCCTCCATTGCCAATACCATCTGCAAGCCTCGGCCTTCACTACCAATCTATGCTACCACCTCATATAGCACATAGATCGGAGTTCAAAATCAACTCCGGCATCGACAAGGTCGAAATCGACGACGATGACGAACAAAAGCAACACAAATCCAATTCTAATCCTTCTTCCTTCTCAGCCCTTTTGAACAATGTGTCTGCCCCTCCATTTGGGTTCCATTGGGATCCCTCCTCCTCCTCCTCCTCCTCGTCGTCGTCGTCAACAACAAATCTTCCCTTCTTTACATCTCAAGCTGAGGATCTTCATAACTTCAATCATGTCACCCCTTTGTCACTCTCAACTGGCTCTCAGTTCTTGGAGTTCAACAATCACTTGCACCAAAATTTCTTCATTAACAACTCTTTGAATACACCTCCTCCTATGCACTCAATAACCCACCCCGCTGTTAGGCCTTTTCATTTCAGCATGGCTACCAAATTTGTTGCTCAACATAAGAATAACAATGGAGATCCTGCCAATAAAGAGGACGGCTTCGGTTCTGATGAATGA

Coding sequence (CDS)

ATGATTACAAATTCTAAAGAAGAGAATTCCCCTCCAAAACTAGTAGCTTCATCAAGCTCATCGGCGGCGCTGGCAACGCCATGGCTTAGGTTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACATAGCAAAGTTTGTACCATAAGAGGGCTGCGCGACAGGCGTGTAAGGCTTTCGGTTTCGACTGCAATTCAGCTCTATGATCTTCAGGACCGCCTCGGCCTTAATCAGCCAAGCAAGGTCGTCGACTGGCTGCTCAACGTCGCCAAGGATGAAATCGACGAACTCCCTCCATTGCCAATACCATCTGCAAGCCTCGGCCTTCACTACCAATCTATGCTACCACCTCATATAGCACATAGATCGGAGTTCAAAATCAACTCCGGCATCGACAAGGTCGAAATCGACGACGATGACGAACAAAAGCAACACAAATCCAATTCTAATCCTTCTTCCTTCTCAGCCCTTTTGAACAATGTGTCTGCCCCTCCATTTGGGTTCCATTGGGATCCCTCCTCCTCCTCCTCCTCCTCGTCGTCGTCGTCAACAACAAATCTTCCCTTCTTTACATCTCAAGCTGAGGATCTTCATAACTTCAATCATGTCACCCCTTTGTCACTCTCAACTGGCTCTCAGTTCTTGGAGTTCAACAATCACTTGCACCAAAATTTCTTCATTAACAACTCTTTGAATACACCTCCTCCTATGCACTCAATAACCCACCCCGCTGTTAGGCCTTTTCATTTCAGCATGGCTACCAAATTTGTTGCTCAACATAAGAATAACAATGGAGATCCTGCCAATAAAGAGGACGGCTTCGGTTCTGATGAATGA
Homology
[Close]
BLAST of CmoCh14G011890 vs. Swiss-Prot
Match: TCP13_ARATH (Transcription factor TCP13 OS=Arabidopsis thaliana GN=TCP13 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.1e-37
Identity = 87/152 (57.24%), Postives = 106/152 (69.74%), Query Frame = 1 

Query: 12  PKLVASSSSSAALATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAI 71
           P  ++SSSSS      W++ KDPRIVRVSRAFGGKDRHSKVCT+RGLRDRRVRLSV TAI
Sbjct: 47  PTSISSSSSS------WMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAI 106

Query: 72  QLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGL--HYQSML-----PPH 131
           QLYDLQ+RLG++QPSK VDWLL+ AK+EIDELPPLPI   +  +  H+QS L     P  
Sbjct: 107 QLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENFSIFNHHQSFLNLGQRPGQ 166

Query: 132 IAHRSEFKINSGIDKVEIDDDDEQKQHKSNSN 157
              +  FKIN  + K      +E  + K  ++
Sbjct: 167 DPTQLGFKINGCVQKSTTTSREENDREKGEND 192

[Close]
BLAST of CmoCh14G011890 vs. Swiss-Prot
Match: TCP17_ARATH (Transcription factor TCP17 OS=Arabidopsis thaliana GN=TCP17 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.1e-29
Identity = 98/224 (43.75%), Postives = 131/224 (58.48%), Query Frame = 1 

Query: 20  SSAALATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDR 79
           SS +L T   R  +PRIVRVSRAFGGKDRHSKVCT+RGLRDRR+RLSV TAIQ+YDLQ+R
Sbjct: 10  SSLSLLTQ--RWNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQER 69

Query: 80  LGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHIAHRSE-FKINSGID 139
           LGL+QPSKV+DWLL VAK+++D LPPL  P    G H    L P++    E F     + 
Sbjct: 70  LGLSQPSKVIDWLLEVAKNDVDLLPPLQFPP---GFH---QLNPNLTGLGESFPGVFDLG 129

Query: 140 KVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPPFGFHWDPSSSSSSSSSSSTTNLPFFTS 199
           + + +  D +K+   N         L++V       H D  +  S+S  S+    P  TS
Sbjct: 130 RTQREALDLEKRKWVN---------LDHVFD-----HIDHHNHFSNSIQSNKLYFPTITS 189

Query: 200 QAEDLH-NFNHVTPLSL-STGSQFLEFNNHLHQNFFINNSLNTP 241
            +   H N  H+    L  +G+  + F+N+     + NN+LN P
Sbjct: 190 SSSSYHYNLGHLQQSLLDQSGNVTVAFSNN-----YNNNNLNPP 206

[Close]
BLAST of CmoCh14G011890 vs. Swiss-Prot
Match: TCP5_ARATH (Transcription factor TCP5 OS=Arabidopsis thaliana GN=TCP5 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.1e-28
Identity = 102/272 (37.50%), Postives = 135/272 (49.63%), Query Frame = 1 

Query: 20  SSAALATPWLR-LKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQD 79
           SS + +  W    ++PRIVRVSR FGGKDRHSKVCT+RGLRDRR+RLSV TAIQLYDLQD
Sbjct: 37  SSVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQD 96

Query: 80  RLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHIAHRSEFKINSGID 139
           RLGL+QPSKV+DWLL  AKD++D+LPPL  P       +  M P  I   S F       
Sbjct: 97  RLGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHG-----FNQMYPNLIFGNSGF------- 156

Query: 140 KVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPPFGFHWDPSSSSSSSSSSSTTNLPFFTS 199
                  +      S + P +    L N         WD   SS + +  + T     T+
Sbjct: 157 ------GESPSSTTSTTFPGTNLGFLEN---------WDLGGSSRTRARLTDTT----TT 216

Query: 200 QAE--DLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPA----VR 259
           Q E  DL     +     ++      FN +  Q F + N  N     +++ H        
Sbjct: 217 QRESFDLDKGKWIKN-DENSNQDHQGFNTNHQQQFPLTNPYNNTSAYYNLGHLQQSLDQS 276

Query: 260 PFHFSMATKFVAQHKNNNGD--PANKEDGFGS 283
             + ++A   VA + NNN +  P +   G GS
Sbjct: 277 GNNVTVAISNVAANNNNNLNLHPPSSSAGDGS 276

[Close]
BLAST of CmoCh14G011890 vs. Swiss-Prot
Match: TCP24_ARATH (Transcription factor TCP24 OS=Arabidopsis thaliana GN=TCP24 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 6.6e-23
Identity = 100/291 (34.36%), Postives = 135/291 (46.39%), Query Frame = 1 

Query: 7   EENSPPKLVASSSSSAALATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLS 66
           +E    KL   S  +  L   W      RI+RVSRA GGKDRHSKV T +GLRDRR+RLS
Sbjct: 13  QEQQSRKLQRFSEDNTGLMRNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLS 72

Query: 67  VSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHIA 126
           V+TAIQ YDLQDRLG +QPSK V+WL+N A D I +LP L      L  +         +
Sbjct: 73  VATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLPLLNTNFDHLDQNQNQTKSACSS 132

Query: 127 HRSEFKINSGIDKVEIDDDDEQKQHKSNSNP---------SSFSALL-NNVSAPPFGFHW 186
             SE  + S + + EI     ++  +  +           SSF+ LL       P   +W
Sbjct: 133 GTSESSLLS-LSRTEIRGKARERARERTAKDRDKDLQNAHSSFTQLLTGGFDQQPSNRNW 192

Query: 187 DPSSSS--------SSSSSSSTTNLPFF--------TSQAEDLHNFNHVTPLSLSTGSQ- 246
              S           +SSS    N PF          S +    N  + +  +L + SQ 
Sbjct: 193 TGGSDCFNPVQLQIPNSSSQEPMNHPFSFVPDYNFGISSSSSAINGGYSSRGTLQSNSQS 252

Query: 247 -FLEFNNHLHQNFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNN 270
            FL  NN++ Q   I++S ++  PM S      +   F MAT     H N+
Sbjct: 253 LFLNNNNNITQRSSISSSSSSSSPMDS------QSISFFMATPPPLDHHNH 295

[Close]
BLAST of CmoCh14G011890 vs. Swiss-Prot
Match: PCF6_ORYSI (Transcription factor PCF6 OS=Oryza sativa subsp. indica GN=PCF6 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-20
Identity = 51/72 (70.83%), Postives = 58/72 (80.56%), Query Frame = 1 

Query: 35  RIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN 94
           RI RV RA GGKDRHSKV T +G+RDRRVRLSV+TAIQ YDLQDRLG +QPSK ++WL+N
Sbjct: 43  RIYRV-RATGGKDRHSKVYTAKGIRDRRVRLSVATAIQFYDLQDRLGFDQPSKAIEWLIN 102

Query: 95  VAKDEIDELPPL 107
            A   ID LP L
Sbjct: 103 AASPAIDTLPSL 113

[Close]
BLAST of CmoCh14G011890 vs. TrEMBL
Match: A0A0A0KVZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G132680 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 8.5e-102
Identity = 220/306 (71.90%), Postives = 240/306 (78.43%), Query Frame = 1 

Query: 1   MITNSKEENSPPKLVASSSSSAALATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRD 60
           MI NSKEENSPP  +A+ SSS++ ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRD
Sbjct: 12  MIKNSKEENSPPPKLAAGSSSSS-ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRD 71

Query: 61  RRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSM 120
           RRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AKDEIDELPPLPIPSASLGLHYQSM
Sbjct: 72  RRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLHYQSM 131

Query: 121 LPPHIA----HRSEFKINSGIDKVEIDDDDEQKQHKSNSNP----SSFSALLNNVSAPPF 180
           +P        HRSEFKI   IDK  ++D+ EQKQHKSNSNP    SSFSALLNNVSAPPF
Sbjct: 132 IPTTTTVVHPHRSEFKI---IDKAGVEDETEQKQHKSNSNPSHPNSSFSALLNNVSAPPF 191

Query: 181 GFHWDPSSSSSSSSSSSTTNLPFFTSQAED------LHNFNHV------TPLSLSTGSQF 240
           GF+WD  +  SSSS+++  NLPF TSQA D      LH FNH+      +PLSLST SQF
Sbjct: 192 GFYWD-HNPPSSSSTTTNNNLPFLTSQAGDNNNNNNLHTFNHLNLSLPPSPLSLSTASQF 251

Query: 241 LEFNNHLHQNFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVA-QHKNNNG-DPANKED 285
           LEF NHLHQNFFINN+ N   P     HP VRPFHFSMATKF+  Q KNNN  DP +K+ 
Sbjct: 252 LEF-NHLHQNFFINNNSNNNNPSF---HPNVRPFHFSMATKFLPHQDKNNNNVDPPSKDH 308

[Close]
BLAST of CmoCh14G011890 vs. TrEMBL
Match: A0A0D2TIP9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G048500 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 4.6e-47
Identity = 148/325 (45.54%), Postives = 183/325 (56.31%), Query Frame = 1 

Query: 1   MITNSKEENSPPKLVASSSSS------AALATPWLRLKDPRIVRVSRAFGGKDRHSKVCT 60
           MI +S+E  SP +      SS      A+ ++P LRLKDPRIVRVSRAFGGKDRHSKV T
Sbjct: 1   MIPSSEEAGSPIQEGKEDESSNKVRKGASTSSPLLRLKDPRIVRVSRAFGGKDRHSKVFT 60

Query: 61  IRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLG 120
           +RGLRDRRVRLSV TAIQLYDLQDRLGLNQPSKVVDWLLN AK EI+ELPPLPIP  +  
Sbjct: 61  VRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNEAKHEIEELPPLPIPQGNFS 120

Query: 121 LHYQSMLPPHIAHRSEFKINSG-------------IDKVEIDDDDEQKQHK-------SN 180
           L+ Q  +P + + +   + ++G               K    D++  + H+         
Sbjct: 121 LNPQ--MPLNASQQPNKQDSTGGFCRAKSKDIVRESSKGSKRDEEASEGHQVQTDYGLQR 180

Query: 181 SNPSSFSALLNN-VSAP-----PFG--FHWDPSSSSSSSSSSSTTNLPFFTSQAEDLHNF 240
           SN S   AL NN VS P     P+G  +H++PS+       S      F   Q E++HNF
Sbjct: 181 SNHSPMPALSNNAVSMPMPMPMPYGSYYHFEPSNFPLPHLGSH----GFVAPQTEEVHNF 240

Query: 241 NHV---TPLSLSTGSQFLEFNNHLH------QNFFINNSLNTPPPMHSITHPAVRPFHFS 283
           N V   + LSLS+GSQ     NH        QN F N      PP +SIT P +R FH S
Sbjct: 241 NVVPLSSTLSLSSGSQ-----NHFQMLSSGAQNPFAN------PPQYSITQPDLRSFHLS 300

[Close]
BLAST of CmoCh14G011890 vs. TrEMBL
Match: B9SNR1_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_1026740 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 5.6e-45
Identity = 102/148 (68.92%), Postives = 116/148 (78.38%), Query Frame = 1 

Query: 1   MITNSKEENSPPKLVAS--------SSSSAALATPWLRLKDPRIVRVSRAFGGKDRHSKV 60
           MI NSKEE+SP K   S        S +S++ +TPWLRLKDPRIVRVSRAFGGKDRHSKV
Sbjct: 1   MINNSKEEDSPTKKEGSTRDHGKITSKASSSTSTPWLRLKDPRIVRVSRAFGGKDRHSKV 60

Query: 61  CTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSAS 120
           CTIRGLRDRRVRLSV TAIQLYDLQD+LGLNQPSKVVDWLLN AK EIDELPPLP+P  +
Sbjct: 61  CTIRGLRDRRVRLSVPTAIQLYDLQDKLGLNQPSKVVDWLLNAAKHEIDELPPLPMPPMN 120

Query: 121 LGLHYQSMLPPH-----IAHRSEFKINS 136
            GL++Q ML  H      +++  FK+NS
Sbjct: 121 FGLNHQ-MLSSHELGASQSNKEGFKVNS 147

[Close]
BLAST of CmoCh14G011890 vs. TrEMBL
Match: B9H0G5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s11510g PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 6.2e-44
Identity = 101/149 (67.79%), Postives = 116/149 (77.85%), Query Frame = 1 

Query: 1   MITNSKEENSPPKLVASS-----SSSAALATPWLRLKDPRIVRVSRAFGGKDRHSKVCTI 60
           MIT+SK+ +SP K    S     S +++ + PWLRLKDPRIVRVSRAFGGKDRHSKVCTI
Sbjct: 1   MITSSKQVDSPTKKEEDSNDGKISKASSSSAPWLRLKDPRIVRVSRAFGGKDRHSKVCTI 60

Query: 61  RGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGL 120
           RGLRDRRVRLSV TAIQLYDLQDRLGLNQPSKVVDWLLN AK EIDELPPLP+P  +  L
Sbjct: 61  RGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPMPPGNFSL 120

Query: 121 HYQSMLPPHI---AHRSE---FKINSGID 139
           ++Q+ML       A RS    FK+N+G+D
Sbjct: 121 NHQAMLGSSNEVGASRSSKEVFKMNNGVD 149

[Close]
BLAST of CmoCh14G011890 vs. TrEMBL
Match: A0A067JTR2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19956 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.8e-43
Identity = 100/151 (66.23%), Postives = 114/151 (75.50%), Query Frame = 1 

Query: 1   MITNSKEENSPPKLV-------------ASSSSSAALATPWLRLKDPRIVRVSRAFGGKD 60
           MI++SKE +SP +               ++ +SS++ ATPWLRLKDPRIVRVSRAFGGKD
Sbjct: 1   MISSSKEVDSPSEKEGDHASSYHDHGKSSTKASSSSSATPWLRLKDPRIVRVSRAFGGKD 60

Query: 61  RHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLP 120
           RHSKVCTIRGLRDRRVRLSV TAIQLYDLQDRLGLNQPSKVVDWLLN AK EIDELPPLP
Sbjct: 61  RHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLP 120

Query: 121 IPSASLGLHYQSML-PPHIAHRSEFKINSGI 138
           IP  +  L++Q+ML    I      K+NS I
Sbjct: 121 IPPVNFALNHQAMLSSSEIGASQSNKLNSSI 151

[Close]
BLAST of CmoCh14G011890 vs. TAIR10
Match: AT3G02150.2 (AT3G02150.2 plastid transcription factor 1)

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-38
Identity = 87/152 (57.24%), Postives = 106/152 (69.74%), Query Frame = 1 

Query: 12  PKLVASSSSSAALATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAI 71
           P  ++SSSSS      W++ KDPRIVRVSRAFGGKDRHSKVCT+RGLRDRRVRLSV TAI
Sbjct: 47  PTSISSSSSS------WMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAI 106

Query: 72  QLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGL--HYQSML-----PPH 131
           QLYDLQ+RLG++QPSK VDWLL+ AK+EIDELPPLPI   +  +  H+QS L     P  
Sbjct: 107 QLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENFSIFNHHQSFLNLGQRPGQ 166

Query: 132 IAHRSEFKINSGIDKVEIDDDDEQKQHKSNSN 157
              +  FKIN  + K      +E  + K  ++
Sbjct: 167 DPTQLGFKINGCVQKSTTTSREENDREKGEND 192

[Close]
BLAST of CmoCh14G011890 vs. TAIR10
Match: AT5G08070.1 (AT5G08070.1 TCP domain protein 17)

HSP 1 Score: 131.0 bits (328), Expect = 1.2e-30
Identity = 98/224 (43.75%), Postives = 131/224 (58.48%), Query Frame = 1 

Query: 20  SSAALATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDR 79
           SS +L T   R  +PRIVRVSRAFGGKDRHSKVCT+RGLRDRR+RLSV TAIQ+YDLQ+R
Sbjct: 10  SSLSLLTQ--RWNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQER 69

Query: 80  LGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHIAHRSE-FKINSGID 139
           LGL+QPSKV+DWLL VAK+++D LPPL  P    G H    L P++    E F     + 
Sbjct: 70  LGLSQPSKVIDWLLEVAKNDVDLLPPLQFPP---GFH---QLNPNLTGLGESFPGVFDLG 129

Query: 140 KVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPPFGFHWDPSSSSSSSSSSSTTNLPFFTS 199
           + + +  D +K+   N         L++V       H D  +  S+S  S+    P  TS
Sbjct: 130 RTQREALDLEKRKWVN---------LDHVFD-----HIDHHNHFSNSIQSNKLYFPTITS 189

Query: 200 QAEDLH-NFNHVTPLSL-STGSQFLEFNNHLHQNFFINNSLNTP 241
            +   H N  H+    L  +G+  + F+N+     + NN+LN P
Sbjct: 190 SSSSYHYNLGHLQQSLLDQSGNVTVAFSNN-----YNNNNLNPP 206

[Close]
BLAST of CmoCh14G011890 vs. TAIR10
Match: AT5G60970.1 (AT5G60970.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5)

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-29
Identity = 102/272 (37.50%), Postives = 135/272 (49.63%), Query Frame = 1 

Query: 20  SSAALATPWLR-LKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQD 79
           SS + +  W    ++PRIVRVSR FGGKDRHSKVCT+RGLRDRR+RLSV TAIQLYDLQD
Sbjct: 37  SSVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQD 96

Query: 80  RLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHIAHRSEFKINSGID 139
           RLGL+QPSKV+DWLL  AKD++D+LPPL  P       +  M P  I   S F       
Sbjct: 97  RLGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHG-----FNQMYPNLIFGNSGF------- 156

Query: 140 KVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPPFGFHWDPSSSSSSSSSSSTTNLPFFTS 199
                  +      S + P +    L N         WD   SS + +  + T     T+
Sbjct: 157 ------GESPSSTTSTTFPGTNLGFLEN---------WDLGGSSRTRARLTDTT----TT 216

Query: 200 QAE--DLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPA----VR 259
           Q E  DL     +     ++      FN +  Q F + N  N     +++ H        
Sbjct: 217 QRESFDLDKGKWIKN-DENSNQDHQGFNTNHQQQFPLTNPYNNTSAYYNLGHLQQSLDQS 276

Query: 260 PFHFSMATKFVAQHKNNNGD--PANKEDGFGS 283
             + ++A   VA + NNN +  P +   G GS
Sbjct: 277 GNNVTVAISNVAANNNNNLNLHPPSSSAGDGS 276

[Close]
BLAST of CmoCh14G011890 vs. TAIR10
Match: AT1G30210.1 (AT1G30210.1 TEOSINTE BRANCHED 1, cycloidea, and PCF family 24)

HSP 1 Score: 109.4 bits (272), Expect = 3.7e-24
Identity = 100/291 (34.36%), Postives = 135/291 (46.39%), Query Frame = 1 

Query: 7   EENSPPKLVASSSSSAALATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLS 66
           +E    KL   S  +  L   W      RI+RVSRA GGKDRHSKV T +GLRDRR+RLS
Sbjct: 13  QEQQSRKLQRFSEDNTGLMRNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLS 72

Query: 67  VSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHIA 126
           V+TAIQ YDLQDRLG +QPSK V+WL+N A D I +LP L      L  +         +
Sbjct: 73  VATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLPLLNTNFDHLDQNQNQTKSACSS 132

Query: 127 HRSEFKINSGIDKVEIDDDDEQKQHKSNSNP---------SSFSALL-NNVSAPPFGFHW 186
             SE  + S + + EI     ++  +  +           SSF+ LL       P   +W
Sbjct: 133 GTSESSLLS-LSRTEIRGKARERARERTAKDRDKDLQNAHSSFTQLLTGGFDQQPSNRNW 192

Query: 187 DPSSSS--------SSSSSSSTTNLPFF--------TSQAEDLHNFNHVTPLSLSTGSQ- 246
              S           +SSS    N PF          S +    N  + +  +L + SQ 
Sbjct: 193 TGGSDCFNPVQLQIPNSSSQEPMNHPFSFVPDYNFGISSSSSAINGGYSSRGTLQSNSQS 252

Query: 247 -FLEFNNHLHQNFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNN 270
            FL  NN++ Q   I++S ++  PM S      +   F MAT     H N+
Sbjct: 253 LFLNNNNNITQRSSISSSSSSSSPMDS------QSISFFMATPPPLDHHNH 295

[Close]
BLAST of CmoCh14G011890 vs. TAIR10
Match: AT4G18390.1 (AT4G18390.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2)

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-21
Identity = 86/230 (37.39%), Postives = 116/230 (50.43%), Query Frame = 1 

Query: 35  RIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN 94
           RI+RVSRA GGKDRHSKV T +G RDRRVRLSVSTA+Q YDLQDRLG +QPSK V+WL+ 
Sbjct: 32  RIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIK 91

Query: 95  VAKDEIDELPPL---PIPSASLGLHYQ--------SMLPPHIAHRSEFKINS---GIDKV 154
            A+D I ELP L     P+       Q        S+     +  S+   NS    + + 
Sbjct: 92  AAEDSISELPSLNNTHFPTDDENHQNQTLTTVAANSLSKSACSSNSDTSKNSSGLSLSRS 151

Query: 155 EIDDDDEQKQHKSNS--------NPSSFSALLNNVSAP-PFGFHWDPSSSSSSSSSSSTT 214
           E+ D   ++  +  +        N +SF+ LLN+ S P      W  S+ SSS     ++
Sbjct: 152 ELRDKARERARERTAKETKERDHNHTSFTDLLNSGSDPVNSNRQWMASAPSSSPMEYFSS 211

Query: 215 NLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNF-FINNSLNTP 241
            L   + Q        +  P S S         +H HQ F F+ + L +P
Sbjct: 212 GLILGSGQQTHFPISTNSHPFS-SISDHHHHHPHHQHQEFSFVPDHLISP 260

[Close]
BLAST of CmoCh14G011890 vs. NCBI nr
Match: gi|778692171|ref|XP_004137255.2| (PREDICTED: transcription factor TCP17-like isoform X2 [Cucumis sativus])

HSP 1 Score: 378.3 bits (970), Expect = 1.2e-101
Identity = 220/306 (71.90%), Postives = 240/306 (78.43%), Query Frame = 1 

Query: 1   MITNSKEENSPPKLVASSSSSAALATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRD 60
           MI NSKEENSPP  +A+ SSS++ ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRD
Sbjct: 10  MIKNSKEENSPPPKLAAGSSSSS-ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRD 69

Query: 61  RRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSM 120
           RRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AKDEIDELPPLPIPSASLGLHYQSM
Sbjct: 70  RRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLHYQSM 129

Query: 121 LPPHIA----HRSEFKINSGIDKVEIDDDDEQKQHKSNSNP----SSFSALLNNVSAPPF 180
           +P        HRSEFKI   IDK  ++D+ EQKQHKSNSNP    SSFSALLNNVSAPPF
Sbjct: 130 IPTTTTVVHPHRSEFKI---IDKAGVEDETEQKQHKSNSNPSHPNSSFSALLNNVSAPPF 189

Query: 181 GFHWDPSSSSSSSSSSSTTNLPFFTSQAED------LHNFNHV------TPLSLSTGSQF 240
           GF+WD  +  SSSS+++  NLPF TSQA D      LH FNH+      +PLSLST SQF
Sbjct: 190 GFYWD-HNPPSSSSTTTNNNLPFLTSQAGDNNNNNNLHTFNHLNLSLPPSPLSLSTASQF 249

Query: 241 LEFNNHLHQNFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVA-QHKNNNG-DPANKED 285
           LEF NHLHQNFFINN+ N   P     HP VRPFHFSMATKF+  Q KNNN  DP +K+ 
Sbjct: 250 LEF-NHLHQNFFINNNSNNNNPSF---HPNVRPFHFSMATKFLPHQDKNNNNVDPPSKDH 306

[Close]
BLAST of CmoCh14G011890 vs. NCBI nr
Match: gi|778692169|ref|XP_011653417.1| (PREDICTED: transcription factor TCP17-like isoform X1 [Cucumis sativus])

HSP 1 Score: 378.3 bits (970), Expect = 1.2e-101
Identity = 220/306 (71.90%), Postives = 240/306 (78.43%), Query Frame = 1 

Query: 1   MITNSKEENSPPKLVASSSSSAALATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRD 60
           MI NSKEENSPP  +A+ SSS++ ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRD
Sbjct: 12  MIKNSKEENSPPPKLAAGSSSSS-ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRD 71

Query: 61  RRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSM 120
           RRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AKDEIDELPPLPIPSASLGLHYQSM
Sbjct: 72  RRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLHYQSM 131

Query: 121 LPPHIA----HRSEFKINSGIDKVEIDDDDEQKQHKSNSNP----SSFSALLNNVSAPPF 180
           +P        HRSEFKI   IDK  ++D+ EQKQHKSNSNP    SSFSALLNNVSAPPF
Sbjct: 132 IPTTTTVVHPHRSEFKI---IDKAGVEDETEQKQHKSNSNPSHPNSSFSALLNNVSAPPF 191

Query: 181 GFHWDPSSSSSSSSSSSTTNLPFFTSQAED------LHNFNHV------TPLSLSTGSQF 240
           GF+WD  +  SSSS+++  NLPF TSQA D      LH FNH+      +PLSLST SQF
Sbjct: 192 GFYWD-HNPPSSSSTTTNNNLPFLTSQAGDNNNNNNLHTFNHLNLSLPPSPLSLSTASQF 251

Query: 241 LEFNNHLHQNFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVA-QHKNNNG-DPANKED 285
           LEF NHLHQNFFINN+ N   P     HP VRPFHFSMATKF+  Q KNNN  DP +K+ 
Sbjct: 252 LEF-NHLHQNFFINNNSNNNNPSF---HPNVRPFHFSMATKFLPHQDKNNNNVDPPSKDH 308

[Close]
BLAST of CmoCh14G011890 vs. NCBI nr
Match: gi|659086669|ref|XP_008444060.1| (PREDICTED: transcription factor TCP17-like isoform X2 [Cucumis melo])

HSP 1 Score: 376.7 bits (966), Expect = 3.5e-101
Identity = 219/306 (71.57%), Postives = 240/306 (78.43%), Query Frame = 1 

Query: 1   MITNSKEENSPPKLVASSSSSAALATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRD 60
           MI NSKEENSPP  +A+ SSS++ ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRD
Sbjct: 10  MIKNSKEENSPPPKLAAGSSSSS-ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRD 69

Query: 61  RRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSM 120
           RRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AKDEIDELPPLPIPSASLGLHYQSM
Sbjct: 70  RRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLHYQSM 129

Query: 121 LPPHIA----HRSEFKINSGIDKVEIDDDDEQKQHKSNSNPS----SFSALLNNVSAPPF 180
           L P       HRSEFKI   IDK  ++D+ +QKQHKSNSNPS    SFSALLNNVSAPPF
Sbjct: 130 LSPTTTVVHPHRSEFKI---IDKAGVEDETKQKQHKSNSNPSHPNSSFSALLNNVSAPPF 189

Query: 181 GFHWDPSSSSSSSSSSSTTNLPFFTSQAED------LHNFNHV------TPLSLSTGSQF 240
           GF+WDP+  SS SSS++  NLPF TSQA D      LH FNH+      +PLSLST S F
Sbjct: 190 GFYWDPNPPSS-SSSTTNNNLPFLTSQAGDNNNNNNLHTFNHLNLSLPPSPLSLSTASPF 249

Query: 241 LEFNNHLHQNFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVA-QHKNNNG-DPANKED 285
           LEF + LHQNFFINN+ N  P      HP VRPFHFSMATKF++ Q KNNN  DP +K+ 
Sbjct: 250 LEF-SQLHQNFFINNNNNNNPSF----HPNVRPFHFSMATKFLSHQDKNNNNVDPTSKDH 305

[Close]
BLAST of CmoCh14G011890 vs. NCBI nr
Match: gi|659086667|ref|XP_008444059.1| (PREDICTED: transcription factor TCP17-like isoform X1 [Cucumis melo])

HSP 1 Score: 376.7 bits (966), Expect = 3.5e-101
Identity = 219/306 (71.57%), Postives = 240/306 (78.43%), Query Frame = 1 

Query: 1   MITNSKEENSPPKLVASSSSSAALATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRD 60
           MI NSKEENSPP  +A+ SSS++ ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRD
Sbjct: 12  MIKNSKEENSPPPKLAAGSSSSS-ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRD 71

Query: 61  RRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSM 120
           RRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AKDEIDELPPLPIPSASLGLHYQSM
Sbjct: 72  RRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLHYQSM 131

Query: 121 LPPHIA----HRSEFKINSGIDKVEIDDDDEQKQHKSNSNPS----SFSALLNNVSAPPF 180
           L P       HRSEFKI   IDK  ++D+ +QKQHKSNSNPS    SFSALLNNVSAPPF
Sbjct: 132 LSPTTTVVHPHRSEFKI---IDKAGVEDETKQKQHKSNSNPSHPNSSFSALLNNVSAPPF 191

Query: 181 GFHWDPSSSSSSSSSSSTTNLPFFTSQAED------LHNFNHV------TPLSLSTGSQF 240
           GF+WDP+  SS SSS++  NLPF TSQA D      LH FNH+      +PLSLST S F
Sbjct: 192 GFYWDPNPPSS-SSSTTNNNLPFLTSQAGDNNNNNNLHTFNHLNLSLPPSPLSLSTASPF 251

Query: 241 LEFNNHLHQNFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVA-QHKNNNG-DPANKED 285
           LEF + LHQNFFINN+ N  P      HP VRPFHFSMATKF++ Q KNNN  DP +K+ 
Sbjct: 252 LEF-SQLHQNFFINNNNNNNPSF----HPNVRPFHFSMATKFLSHQDKNNNNVDPTSKDH 307

[Close]
BLAST of CmoCh14G011890 vs. NCBI nr
Match: gi|823255376|ref|XP_012460346.1| (PREDICTED: transcription factor TCP5 [Gossypium raimondii])

HSP 1 Score: 196.4 bits (498), Expect = 6.6e-47
Identity = 148/325 (45.54%), Postives = 183/325 (56.31%), Query Frame = 1 

Query: 1   MITNSKEENSPPKLVASSSSS------AALATPWLRLKDPRIVRVSRAFGGKDRHSKVCT 60
           MI +S+E  SP +      SS      A+ ++P LRLKDPRIVRVSRAFGGKDRHSKV T
Sbjct: 1   MIPSSEEAGSPIQEGKEDESSNKVRKGASTSSPLLRLKDPRIVRVSRAFGGKDRHSKVFT 60

Query: 61  IRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLG 120
           +RGLRDRRVRLSV TAIQLYDLQDRLGLNQPSKVVDWLLN AK EI+ELPPLPIP  +  
Sbjct: 61  VRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNEAKHEIEELPPLPIPQGNFS 120

Query: 121 LHYQSMLPPHIAHRSEFKINSG-------------IDKVEIDDDDEQKQHK-------SN 180
           L+ Q  +P + + +   + ++G               K    D++  + H+         
Sbjct: 121 LNPQ--MPLNASQQPNKQDSTGGFCRAKSKDIVRESSKGSKRDEEASEGHQVQTDYGLQR 180

Query: 181 SNPSSFSALLNN-VSAP-----PFG--FHWDPSSSSSSSSSSSTTNLPFFTSQAEDLHNF 240
           SN S   AL NN VS P     P+G  +H++PS+       S      F   Q E++HNF
Sbjct: 181 SNHSPMPALSNNAVSMPMPMPMPYGSYYHFEPSNFPLPHLGSH----GFVAPQTEEVHNF 240

Query: 241 NHV---TPLSLSTGSQFLEFNNHLH------QNFFINNSLNTPPPMHSITHPAVRPFHFS 283
           N V   + LSLS+GSQ     NH        QN F N      PP +SIT P +R FH S
Sbjct: 241 NVVPLSSTLSLSSGSQ-----NHFQMLSSGAQNPFAN------PPQYSITQPDLRSFHLS 300

The following BLAST results are available for this feature:
BLAST of CmoCh14G011890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TCP13_ARATH2.1e-3757.24Transcription factor TCP13 OS=Arabidopsis thaliana GN=TCP13 PE=1 SV=1[more]
TCP17_ARATH2.1e-2943.75Transcription factor TCP17 OS=Arabidopsis thaliana GN=TCP17 PE=1 SV=1[more]
TCP5_ARATH3.1e-2837.50Transcription factor TCP5 OS=Arabidopsis thaliana GN=TCP5 PE=1 SV=1[more]
TCP24_ARATH6.6e-2334.36Transcription factor TCP24 OS=Arabidopsis thaliana GN=TCP24 PE=1 SV=1[more]
PCF6_ORYSI1.4e-2070.83Transcription factor PCF6 OS=Oryza sativa subsp. indica GN=PCF6 PE=3 SV=1[more]
BLAST of CmoCh14G011890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVZ7_CUCSA8.5e-10271.90Uncharacterized protein OS=Cucumis sativus GN=Csa_4G132680 PE=4 SV=1[more]
A0A0D2TIP9_GOSRA4.6e-4745.54Uncharacterized protein OS=Gossypium raimondii GN=B456_012G048500 PE=4 SV=1[more]
B9SNR1_RICCO5.6e-4568.92Transcription factor, putative OS=Ricinus communis GN=RCOM_1026740 PE=4 SV=1[more]
B9H0G5_POPTR6.2e-4467.79Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s11510g PE=4 SV=1[more]
A0A067JTR2_JATCU1.8e-4366.23Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19956 PE=4 SV=1[more]
BLAST of CmoCh14G011890 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G02150.21.2e-3857.24 plastid transcription factor 1[more]
AT5G08070.11.2e-3043.75 TCP domain protein 17[more]
AT5G60970.11.7e-2937.50 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5[more]
AT1G30210.13.7e-2434.36 TEOSINTE BRANCHED 1, cycloidea, and PCF family 24[more]
AT4G18390.11.0e-2137.39 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2[more]
BLAST of CmoCh14G011890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778692171|ref|XP_004137255.2|1.2e-10171.90PREDICTED: transcription factor TCP17-like isoform X2 [Cucumis sativus][more]
gi|778692169|ref|XP_011653417.1|1.2e-10171.90PREDICTED: transcription factor TCP17-like isoform X1 [Cucumis sativus][more]
gi|659086669|ref|XP_008444060.1|3.5e-10171.57PREDICTED: transcription factor TCP17-like isoform X2 [Cucumis melo][more]
gi|659086667|ref|XP_008444059.1|3.5e-10171.57PREDICTED: transcription factor TCP17-like isoform X1 [Cucumis melo][more]
gi|823255376|ref|XP_012460346.1|6.6e-4745.54PREDICTED: transcription factor TCP5 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005333Transcription_factor_TCP
IPR017887TF_TCP_subgr
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0030154 cell differentiation
biological_process GO:0009694 jasmonic acid metabolic process
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0045962 positive regulation of development, heterochronic
biological_process GO:0031347 regulation of defense response
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009753 response to jasmonic acid
cellular_component GO:0005575 cellular_component
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G011890.1CmoCh14G011890.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005333Transcription factor, TCPPFAMPF03634TCPcoord: 45..144
score: 2.0
IPR017887Transcription factor TCP subgroupPROFILEPS51369TCPcoord: 45..103
score: 30
NoneNo IPR availablePANTHERPTHR31072FAMILY NOT NAMEDcoord: 1..109
score: 3.9
NoneNo IPR availablePANTHERPTHR31072:SF5TRANSCRIPTION FACTOR TCP13coord: 1..109
score: 3.9