Cla010762 (gene) Watermelon (97103) v1

Overview
NameCla010762
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionTB1-like TCP family transcription factor (Fragment) (AHRD V1 *-*- F5AIH3_9ASTR); contains Interpro domain(s) IPR005333 Transcription factor, TCP
LocationChr7 : 29613042 .. 29613944 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTAAAAATTCTAAAGAAGAGAATTCACCACCTCCAAAACTAGCAGCAGCAGGAGGTTCATCAAGCTCATCGTTGGCGGCGGCCACGCCATGGCTTAGGTTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACACAGCAAAGTTTGTACCATAAGAGGGCTGCGCGACAGGCGTGTAAGGCTTTCGGTTTCAACCGCAATTCAGCTCTATGATCTTCAAGACCGGCTTGGGCTTAATCAGCCGAGCAAGGTCGTCGACTGGTTGCTGAACGCCGCCAAGGATGAAATCGACGAACTCCCTCCATTGCCAATCCCATCGGCAAGCCTTGGCCTTCACTATCAATCTATGCTACCACCAACTGTGCACCACCCGCATAGATCAGAGTTCAAAATCAACTGCATCGACAAGGCCGAGGTCAAGGACGAGACCGAATTGGAAAAGCAACAGAAATCAAATAATAATTCTAATAATCCCTCTCATCCTTCTTCCTTCTCAGCCCTTTTGAACAATGTGTCTGCCCCTCCATTTGGGTTTTATTGGGATCATAATCCTCCATCATCATCGACATCATCATCAACAACAACAACAAATAATCTTCCATTTCTTACATCTCAACAACCTCAGGATAATAATAATCTTCATAACTTCAATCATCTCAATTTGTCTTTGCCTTCCCCTTTGTCTCTTGAGTTCAATCACTTGCACCAAAATTTCTTCATTAACAATAATTCTCTCAATAATACACCTCCTAATTTCCACCCCGCTGTTAGGCCTTTTCATTTTAGTATGGCTACCAAATTCCTTTCTCAAGACAAGAATAACAATAATAATGCAGATAATCCTCCAAATAAGGATCATGGCTTTGCTTCTGATGAATGA

mRNA sequence

ATGATTAAAAATTCTAAAGAAGAGAATTCACCACCTCCAAAACTAGCAGCAGCAGGAGGTTCATCAAGCTCATCGTTGGCGGCGGCCACGCCATGGCTTAGGTTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACACAGCAAAGTTTGTACCATAAGAGGGCTGCGCGACAGGCGTGTAAGGCTTTCGGTTTCAACCGCAATTCAGCTCTATGATCTTCAAGACCGGCTTGGGCTTAATCAGCCGAGCAAGGTCGTCGACTGGTTGCTGAACGCCGCCAAGGATGAAATCGACGAACTCCCTCCATTGCCAATCCCATCGGCAAGCCTTGGCCTTCACTATCAATCTATGCTACCACCAACTGTGCACCACCCGCATAGATCAGAGTTCAAAATCAACTGCATCGACAAGGCCGAGGTCAAGGACGAGACCGAATTGGAAAAGCAACAGAAATCAAATAATAATTCTAATAATCCCTCTCATCCTTCTTCCTTCTCAGCCCTTTTGAACAATGTGTCTGCCCCTCCATTTGGGTTTTATTGGGATCATAATCCTCCATCATCATCGACATCATCATCAACAACAACAACAAATAATCTTCCATTTCTTACATCTCAACAACCTCAGGATAATAATAATCTTCATAACTTCAATCATCTCAATTTGTCTTTGCCTTCCCCTTTGTCTCTTGAGTTCAATCACTTGCACCAAAATTTCTTCATTAACAATAATTCTCTCAATAATACACCTCCTAATTTCCACCCCGCTGTTAGGCCTTTTCATTTTAGTATGGCTACCAAATTCCTTTCTCAAGACAAGAATAACAATAATAATGCAGATAATCCTCCAAATAAGGATCATGGCTTTGCTTCTGATGAATGA

Coding sequence (CDS)

ATGATTAAAAATTCTAAAGAAGAGAATTCACCACCTCCAAAACTAGCAGCAGCAGGAGGTTCATCAAGCTCATCGTTGGCGGCGGCCACGCCATGGCTTAGGTTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACACAGCAAAGTTTGTACCATAAGAGGGCTGCGCGACAGGCGTGTAAGGCTTTCGGTTTCAACCGCAATTCAGCTCTATGATCTTCAAGACCGGCTTGGGCTTAATCAGCCGAGCAAGGTCGTCGACTGGTTGCTGAACGCCGCCAAGGATGAAATCGACGAACTCCCTCCATTGCCAATCCCATCGGCAAGCCTTGGCCTTCACTATCAATCTATGCTACCACCAACTGTGCACCACCCGCATAGATCAGAGTTCAAAATCAACTGCATCGACAAGGCCGAGGTCAAGGACGAGACCGAATTGGAAAAGCAACAGAAATCAAATAATAATTCTAATAATCCCTCTCATCCTTCTTCCTTCTCAGCCCTTTTGAACAATGTGTCTGCCCCTCCATTTGGGTTTTATTGGGATCATAATCCTCCATCATCATCGACATCATCATCAACAACAACAACAAATAATCTTCCATTTCTTACATCTCAACAACCTCAGGATAATAATAATCTTCATAACTTCAATCATCTCAATTTGTCTTTGCCTTCCCCTTTGTCTCTTGAGTTCAATCACTTGCACCAAAATTTCTTCATTAACAATAATTCTCTCAATAATACACCTCCTAATTTCCACCCCGCTGTTAGGCCTTTTCATTTTAGTATGGCTACCAAATTCCTTTCTCAAGACAAGAATAACAATAATAATGCAGATAATCCTCCAAATAAGGATCATGGCTTTGCTTCTGATGAATGA

Protein sequence

MIKNSKEENSPPPKLAAAGGSSSSSLAAATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLHYQSMLPPTVHHPHRSEFKINCIDKAEVKDETELEKQQKSNNNSNNPSHPSSFSALLNNVSAPPFGFYWDHNPPSSSTSSSTTTTNNLPFLTSQQPQDNNNLHNFNHLNLSLPSPLSLEFNHLHQNFFINNNSLNNTPPNFHPAVRPFHFSMATKFLSQDKNNNNNADNPPNKDHGFASDE
Homology
[Close]
BLAST of Cla010762 vs. Swiss-Prot
Match: TCP13_ARATH (Transcription factor TCP13 OS=Arabidopsis thaliana GN=TCP13 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.2e-38
Identity = 88/162 (54.32%), Postives = 111/162 (68.52%), Query Frame = 1 

Query: 23  SSSLAAATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQD 82
           +S  ++++ W++ KDPRIVRVSRAFGGKDRHSKVCT+RGLRDRRVRLSV TAIQLYDLQ+
Sbjct: 48  TSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQE 107

Query: 83  RLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGL--HYQSML---PPTVHHPHRSEF 142
           RLG++QPSK VDWLL+AAK+EIDELPPLPI   +  +  H+QS L         P +  F
Sbjct: 108 RLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENFSIFNHHQSFLNLGQRPGQDPTQLGF 167

Query: 143 KIN-CIDKAEVKDETELEKQQKSNN-NSNNPSHPSSFSALLN 178
           KIN C+ K+      E ++++  N+    N  H  S+    N
Sbjct: 168 KINGCVQKSTTTSREENDREKGENDVVYTNNHHVGSYGTYHN 209

[Close]
BLAST of Cla010762 vs. Swiss-Prot
Match: TCP5_ARATH (Transcription factor TCP5 OS=Arabidopsis thaliana GN=TCP5 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 5.7e-33
Identity = 105/285 (36.84%), Postives = 141/285 (49.47%), Query Frame = 1 

Query: 24  SSLAAATPWLR-LKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQD 83
           SS++++  W    ++PRIVRVSR FGGKDRHSKVCT+RGLRDRR+RLSV TAIQLYDLQD
Sbjct: 37  SSVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQD 96

Query: 84  RLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLHYQSMLPPTVHHPHRSEFKINCI 143
           RLGL+QPSKV+DWLL AAKD++D+LPPL  P       +  M P  +     S F     
Sbjct: 97  RLGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHG-----FNQMYPNLIF--GNSGF----- 156

Query: 144 DKAEVKDETELEKQQKSNNNSNNPSHPSSFSALLNNVSAPPFGFYWDHNPPSSSTS--SS 203
                          +S +++ + + P +    L N         WD    S + +  + 
Sbjct: 157 --------------GESPSSTTSTTFPGTNLGFLEN---------WDLGGSSRTRARLTD 216

Query: 204 TTTTNNLPF-LTSQQPQDNNNLHNFNHLNLSLPSPLSLEFNHLHQNFFINNNSLNNTPPN 263
           TTTT    F L   +   N+   N +H            FN  HQ  F   N  NNT   
Sbjct: 217 TTTTQRESFDLDKGKWIKNDENSNQDHQG----------FNTNHQQQFPLTNPYNNTSAY 276

Query: 264 FH-----PAVRPFHFSMATKFLSQDKNNNNNAD-NPPNKDHGFAS 299
           ++      ++     ++     +   NNNNN + +PP+   G  S
Sbjct: 277 YNLGHLQQSLDQSGNNVTVAISNVAANNNNNLNLHPPSSSAGDGS 276

[Close]
BLAST of Cla010762 vs. Swiss-Prot
Match: TCP17_ARATH (Transcription factor TCP17 OS=Arabidopsis thaliana GN=TCP17 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.4e-31
Identity = 93/217 (42.86%), Postives = 129/217 (59.45%), Query Frame = 1 

Query: 24  SSLAAATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDR 83
           SSL+  T   R  +PRIVRVSRAFGGKDRHSKVCT+RGLRDRR+RLSV TAIQ+YDLQ+R
Sbjct: 10  SSLSLLTQ--RWNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQER 69

Query: 84  LGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLHYQSMLPPTVHHPHRSEFKINCID 143
           LGL+QPSKV+DWLL  AK+++D LPPL  P    G H    L P +     S   +  + 
Sbjct: 70  LGLSQPSKVIDWLLEVAKNDVDLLPPLQFPP---GFH---QLNPNLTGLGESFPGVFDLG 129

Query: 144 KAEVKDETELEKQQKSNNNS--NNPSHPSSFSALLNNVSAPPFGFYWDHNPPSSSTSSST 203
           + + ++  +LEK++  N +   ++  H + FS   N++ +    F        + TSSS+
Sbjct: 130 RTQ-REALDLEKRKWVNLDHVFDHIDHHNHFS---NSIQSNKLYF-------PTITSSSS 189

Query: 204 TTTNNLPFLTSQQPQDNNNL-----HNFNHLNLSLPS 234
           +   NL  L       + N+     +N+N+ NL+ P+
Sbjct: 190 SYHYNLGHLQQSLLDQSGNVTVAFSNNYNNNNLNPPA 207

[Close]
BLAST of Cla010762 vs. Swiss-Prot
Match: TCP2_ARATH (Transcription factor TCP2 OS=Arabidopsis thaliana GN=TCP2 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-25
Identity = 78/211 (36.97%), Postives = 110/211 (52.13%), Query Frame = 1 

Query: 39  RIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN 98
           RI+RVSRA GGKDRHSKV T +G RDRRVRLSVSTA+Q YDLQDRLG +QPSK V+WL+ 
Sbjct: 32  RIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIK 91

Query: 99  AAKDEIDELPPL---PIPSASLGLHYQSMLPPTVHHPHRSEFKIN----------CIDKA 158
           AA+D I ELP L     P+       Q++     +   +S    N           + ++
Sbjct: 92  AAEDSISELPSLNNTHFPTDDENHQNQTLTTVAANSLSKSACSSNSDTSKNSSGLSLSRS 151

Query: 159 EVKDETELEKQQKSNNNSNNPSH-PSSFSALLNNVSAP-PFGFYWDHNPPSSSTSS---- 218
           E++D+     ++++   +    H  +SF+ LLN+ S P      W  + PSSS       
Sbjct: 152 ELRDKARERARERTAKETKERDHNHTSFTDLLNSGSDPVNSNRQWMASAPSSSPMEYFSS 211

Query: 219 ----STTTTNNLPFLTSQQPQDNNNLHNFNH 227
                +    + P  T+  P  + + H+ +H
Sbjct: 212 GLILGSGQQTHFPISTNSHPFSSISDHHHHH 242

[Close]
BLAST of Cla010762 vs. Swiss-Prot
Match: TCP24_ARATH (Transcription factor TCP24 OS=Arabidopsis thaliana GN=TCP24 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 5.7e-25
Identity = 87/231 (37.66%), Postives = 121/231 (52.38%), Query Frame = 1 

Query: 39  RIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN 98
           RI+RVSRA GGKDRHSKV T +GLRDRR+RLSV+TAIQ YDLQDRLG +QPSK V+WL+N
Sbjct: 40  RIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQPSKAVEWLIN 99

Query: 99  AAKDEIDELPPLPIPSASLGLHYQSMLPPTVHHPHRSEFKINCIDKAEVKD---ETELEK 158
           AA D I +LP L      L  +       +      SE  +  + + E++    E   E+
Sbjct: 100 AASDSITDLPLLNTNFDHLDQNQNQ--TKSACSSGTSESSLLSLSRTEIRGKARERARER 159

Query: 159 QQKSNNNSNNPSHPSSFSALLNNVSAPPFGFYWDHNPPSSSTSSSTTTTN----NLPFLT 218
             K  +     +H SSF+ LL        GF  D  P + + +  +   N     +P  +
Sbjct: 160 TAKDRDKDLQNAH-SSFTQLLTG------GF--DQQPSNRNWTGGSDCFNPVQLQIPNSS 219

Query: 219 SQQPQDNNNL----HNF------NHLNLSLPSPLSLEFNHLHQNFFINNNS 253
           SQ+P ++       +NF      + +N    S  +L+ N   Q+ F+NNN+
Sbjct: 220 SQEPMNHPFSFVPDYNFGISSSSSAINGGYSSRGTLQSN--SQSLFLNNNN 257

[Close]
BLAST of Cla010762 vs. TrEMBL
Match: A0A0A0KVZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G132680 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 3.3e-128
Identity = 257/313 (82.11%), Postives = 265/313 (84.66%), Query Frame = 1 

Query: 1   MIKNSKEENSPPPKLAAAGGSSSSSLAAATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIR 60
           MIKNSKEENSPPPKLAA  GSSSSS   ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIR
Sbjct: 12  MIKNSKEENSPPPKLAA--GSSSSS---ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIR 71

Query: 61  GLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLH 120
           GLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLH
Sbjct: 72  GLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLH 131

Query: 121 YQSMLP--PTVHHPHRSEFKINCIDKAEVKDETELEKQQKSNNNSNNPSHP-SSFSALLN 180
           YQSM+P   TV HPHRSEFKI  IDKA V+DETE +KQ KSN   +NPSHP SSFSALLN
Sbjct: 132 YQSMIPTTTTVVHPHRSEFKI--IDKAGVEDETE-QKQHKSN---SNPSHPNSSFSALLN 191

Query: 181 NVSAPPFGFYWDHNPPSSSTSSSTTTTNNLPFLTSQ--QPQDNNNLHNFNHLNLSL-PSP 240
           NVSAPPFGFYWDHNPPS   SSSTTT NNLPFLTSQ     +NNNLH FNHLNLSL PSP
Sbjct: 192 NVSAPPFGFYWDHNPPS---SSSTTTNNNLPFLTSQAGDNNNNNNLHTFNHLNLSLPPSP 251

Query: 241 LS-------LEFNHLHQNFFINNNSLNNTPPNFHPAVRPFHFSMATKFLSQDKNNNNNAD 300
           LS       LEFNHLHQNFFINNNS NN  P+FHP VRPFHFSMATKFL     NNNN D
Sbjct: 252 LSLSTASQFLEFNHLHQNFFINNNS-NNNNPSFHPNVRPFHFSMATKFLPHQDKNNNNVD 308

[Close]
BLAST of Cla010762 vs. TrEMBL
Match: B9SNR1_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_1026740 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.3e-44
Identity = 98/146 (67.12%), Postives = 114/146 (78.08%), Query Frame = 1 

Query: 1   MIKNSKEENSPPPKLAAAGG----SSSSSLAAATPWLRLKDPRIVRVSRAFGGKDRHSKV 60
           MI NSKEE+SP  K  +       +S +S + +TPWLRLKDPRIVRVSRAFGGKDRHSKV
Sbjct: 1   MINNSKEEDSPTKKEGSTRDHGKITSKASSSTSTPWLRLKDPRIVRVSRAFGGKDRHSKV 60

Query: 61  CTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSAS 120
           CTIRGLRDRRVRLSV TAIQLYDLQD+LGLNQPSKVVDWLLNAAK EIDELPPLP+P  +
Sbjct: 61  CTIRGLRDRRVRLSVPTAIQLYDLQDKLGLNQPSKVVDWLLNAAKHEIDELPPLPMPPMN 120

Query: 121 LGLHYQSMLPPTV--HHPHRSEFKIN 141
            GL++Q +    +     ++  FK+N
Sbjct: 121 FGLNHQMLSSHELGASQSNKEGFKVN 146

[Close]
BLAST of Cla010762 vs. TrEMBL
Match: A0A067JTR2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19956 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.9e-44
Identity = 98/134 (73.13%), Postives = 107/134 (79.85%), Query Frame = 1 

Query: 1   MIKNSKEENSPPPKLAAAGGS---------SSSSLAAATPWLRLKDPRIVRVSRAFGGKD 60
           MI +SKE +SP  K      S          +SS ++ATPWLRLKDPRIVRVSRAFGGKD
Sbjct: 1   MISSSKEVDSPSEKEGDHASSYHDHGKSSTKASSSSSATPWLRLKDPRIVRVSRAFGGKD 60

Query: 61  RHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLP 120
           RHSKVCTIRGLRDRRVRLSV TAIQLYDLQDRLGLNQPSKVVDWLLNAAK EIDELPPLP
Sbjct: 61  RHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLP 120

Query: 121 IPSASLGLHYQSML 126
           IP  +  L++Q+ML
Sbjct: 121 IPPVNFALNHQAML 134

[Close]
BLAST of Cla010762 vs. TrEMBL
Match: A0A0D2TIP9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G048500 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.9e-44
Identity = 142/325 (43.69%), Postives = 175/325 (53.85%), Query Frame = 1 

Query: 1   MIKNSKEENSPPPKLAAAGGSSSSSLAAAT--PWLRLKDPRIVRVSRAFGGKDRHSKVCT 60
           MI +S+E  SP  +      S+     A+T  P LRLKDPRIVRVSRAFGGKDRHSKV T
Sbjct: 1   MIPSSEEAGSPIQEGKEDESSNKVRKGASTSSPLLRLKDPRIVRVSRAFGGKDRHSKVFT 60

Query: 61  IRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLG 120
           +RGLRDRRVRLSV TAIQLYDLQDRLGLNQPSKVVDWLLN AK EI+ELPPLPIP  +  
Sbjct: 61  VRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNEAKHEIEELPPLPIPQGNFS 120

Query: 121 LHYQSMLPPTVHHPH-----------RSEFKINCIDKAEVKDETELEKQQKSNNNSNNPS 180
           L+ Q  L  +   P+           +S+  +    K   +DE   E  Q   +     S
Sbjct: 121 LNPQMPLNAS-QQPNKQDSTGGFCRAKSKDIVRESSKGSKRDEEASEGHQVQTDYGLQRS 180

Query: 181 HPSSFSALLNN-VSAP-----PFGFYWDHNPPSSSTSSSTTTTNNLPFLTSQ---QPQDN 240
           + S   AL NN VS P     P+G Y+ H  PS+           LP L S     PQ  
Sbjct: 181 NHSPMPALSNNAVSMPMPMPMPYGSYY-HFEPSNFP---------LPHLGSHGFVAPQ-T 240

Query: 241 NNLHNFNHLNLSLPSPLSLEFNHLHQNFFINNNSLN--NTPPNF---HPAVRPFHFSMAT 299
             +HNFN + LS  S LSL     +    +++ + N    PP +    P +R FH S+A 
Sbjct: 241 EEVHNFNVVPLS--STLSLSSGSQNHFQMLSSGAQNPFANPPQYSITQPDLRSFHLSIAP 300

[Close]
BLAST of Cla010762 vs. TrEMBL
Match: A0A022RZ06_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011591mg PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 6.5e-44
Identity = 120/241 (49.79%), Postives = 145/241 (60.17%), Query Frame = 1 

Query: 4   NSKEENSPPPKLAAAGGSSSSSLAAATPW--LRLKDPRIVRVSRAFGGKDRHSKVCTIRG 63
           ++  +N+P  K      ++S++  AA+ W   RLKDPRIVRVSRAFGGKDRHSKVCT+RG
Sbjct: 5   SNNTDNNPAAKNLFKAATTSTTTTAASSWSNTRLKDPRIVRVSRAFGGKDRHSKVCTVRG 64

Query: 64  LRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLHY 123
           LRDRRVRLSV TAIQLYDLQDRLGLNQPSKVVDWLL+ AK+EIDELPPL IP   +    
Sbjct: 65  LRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLDIAKNEIDELPPLQIPQGMMINWN 124

Query: 124 QSMLPPTVHHPHRSEFKINCIDKAEVKDETELEKQQKSNNN---SNNPSHPSSFSALLNN 183
            S + P   H  RSE  IN        +  +L++   SNN      N +  S   AL NN
Sbjct: 125 SSNVVP--EHSRRSE-DINLFG----GNNNKLKEVDTSNNRDEAETNWTRSSDEGALYNN 184

Query: 184 VSAPPFGFYWDHNPPSSSTSSSTTTTNN------LPFLTSQQPQDNNNLHNFNHLNLSLP 234
           VSA      WD+ P +  T S     NN         +TS   Q N++ HNF   +L LP
Sbjct: 185 VSAYNSYVRWDNYPSNMLTLSHDQQHNNHNPTKGHALITSAHNQLNDDWHNF---SLQLP 235

[Close]
BLAST of Cla010762 vs. NCBI nr
Match: gi|778692171|ref|XP_004137255.2| (PREDICTED: transcription factor TCP17-like isoform X2 [Cucumis sativus])

HSP 1 Score: 466.1 bits (1198), Expect = 4.7e-128
Identity = 257/313 (82.11%), Postives = 265/313 (84.66%), Query Frame = 1 

Query: 1   MIKNSKEENSPPPKLAAAGGSSSSSLAAATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIR 60
           MIKNSKEENSPPPKLAA  GSSSSS   ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIR
Sbjct: 10  MIKNSKEENSPPPKLAA--GSSSSS---ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIR 69

Query: 61  GLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLH 120
           GLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLH
Sbjct: 70  GLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLH 129

Query: 121 YQSMLP--PTVHHPHRSEFKINCIDKAEVKDETELEKQQKSNNNSNNPSHP-SSFSALLN 180
           YQSM+P   TV HPHRSEFKI  IDKA V+DETE +KQ KSN   +NPSHP SSFSALLN
Sbjct: 130 YQSMIPTTTTVVHPHRSEFKI--IDKAGVEDETE-QKQHKSN---SNPSHPNSSFSALLN 189

Query: 181 NVSAPPFGFYWDHNPPSSSTSSSTTTTNNLPFLTSQ--QPQDNNNLHNFNHLNLSL-PSP 240
           NVSAPPFGFYWDHNPPS   SSSTTT NNLPFLTSQ     +NNNLH FNHLNLSL PSP
Sbjct: 190 NVSAPPFGFYWDHNPPS---SSSTTTNNNLPFLTSQAGDNNNNNNLHTFNHLNLSLPPSP 249

Query: 241 LS-------LEFNHLHQNFFINNNSLNNTPPNFHPAVRPFHFSMATKFLSQDKNNNNNAD 300
           LS       LEFNHLHQNFFINNNS NN  P+FHP VRPFHFSMATKFL     NNNN D
Sbjct: 250 LSLSTASQFLEFNHLHQNFFINNNS-NNNNPSFHPNVRPFHFSMATKFLPHQDKNNNNVD 306

[Close]
BLAST of Cla010762 vs. NCBI nr
Match: gi|778692169|ref|XP_011653417.1| (PREDICTED: transcription factor TCP17-like isoform X1 [Cucumis sativus])

HSP 1 Score: 466.1 bits (1198), Expect = 4.7e-128
Identity = 257/313 (82.11%), Postives = 265/313 (84.66%), Query Frame = 1 

Query: 1   MIKNSKEENSPPPKLAAAGGSSSSSLAAATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIR 60
           MIKNSKEENSPPPKLAA  GSSSSS   ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIR
Sbjct: 12  MIKNSKEENSPPPKLAA--GSSSSS---ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIR 71

Query: 61  GLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLH 120
           GLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLH
Sbjct: 72  GLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLH 131

Query: 121 YQSMLP--PTVHHPHRSEFKINCIDKAEVKDETELEKQQKSNNNSNNPSHP-SSFSALLN 180
           YQSM+P   TV HPHRSEFKI  IDKA V+DETE +KQ KSN   +NPSHP SSFSALLN
Sbjct: 132 YQSMIPTTTTVVHPHRSEFKI--IDKAGVEDETE-QKQHKSN---SNPSHPNSSFSALLN 191

Query: 181 NVSAPPFGFYWDHNPPSSSTSSSTTTTNNLPFLTSQ--QPQDNNNLHNFNHLNLSL-PSP 240
           NVSAPPFGFYWDHNPPS   SSSTTT NNLPFLTSQ     +NNNLH FNHLNLSL PSP
Sbjct: 192 NVSAPPFGFYWDHNPPS---SSSTTTNNNLPFLTSQAGDNNNNNNLHTFNHLNLSLPPSP 251

Query: 241 LS-------LEFNHLHQNFFINNNSLNNTPPNFHPAVRPFHFSMATKFLSQDKNNNNNAD 300
           LS       LEFNHLHQNFFINNNS NN  P+FHP VRPFHFSMATKFL     NNNN D
Sbjct: 252 LSLSTASQFLEFNHLHQNFFINNNS-NNNNPSFHPNVRPFHFSMATKFLPHQDKNNNNVD 308

[Close]
BLAST of Cla010762 vs. NCBI nr
Match: gi|659086667|ref|XP_008444059.1| (PREDICTED: transcription factor TCP17-like isoform X1 [Cucumis melo])

HSP 1 Score: 451.8 bits (1161), Expect = 9.2e-124
Identity = 252/313 (80.51%), Postives = 262/313 (83.71%), Query Frame = 1 

Query: 1   MIKNSKEENSPPPKLAAAGGSSSSSLAAATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIR 60
           MIKNSKEENSPPPKLAA  GSSSSS   ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIR
Sbjct: 12  MIKNSKEENSPPPKLAA--GSSSSS---ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIR 71

Query: 61  GLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLH 120
           GLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLH
Sbjct: 72  GLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLH 131

Query: 121 YQSMLPP--TVHHPHRSEFKINCIDKAEVKDETELEKQQKSNNNSNNPSHP-SSFSALLN 180
           YQSML P  TV HPHRSEFKI  IDKA V+DET+ +KQ KSN   +NPSHP SSFSALLN
Sbjct: 132 YQSMLSPTTTVVHPHRSEFKI--IDKAGVEDETK-QKQHKSN---SNPSHPNSSFSALLN 191

Query: 181 NVSAPPFGFYWDHNPPSSSTSSSTTTTNNLPFLTSQ--QPQDNNNLHNFNHLNLSL-PSP 240
           NVSAPPFGFYWD NPPS   SSS+TT NNLPFLTSQ     +NNNLH FNHLNLSL PSP
Sbjct: 192 NVSAPPFGFYWDPNPPS---SSSSTTNNNLPFLTSQAGDNNNNNNLHTFNHLNLSLPPSP 251

Query: 241 LS-------LEFNHLHQNFFINNNSLNNTPPNFHPAVRPFHFSMATKFLSQDKNNNNNAD 300
           LS       LEF+ LHQNFFINNN  NN  P+FHP VRPFHFSMATKFLS    NNNN D
Sbjct: 252 LSLSTASPFLEFSQLHQNFFINNN--NNNNPSFHPNVRPFHFSMATKFLSHQDKNNNNVD 307

[Close]
BLAST of Cla010762 vs. NCBI nr
Match: gi|659086669|ref|XP_008444060.1| (PREDICTED: transcription factor TCP17-like isoform X2 [Cucumis melo])

HSP 1 Score: 451.8 bits (1161), Expect = 9.2e-124
Identity = 252/313 (80.51%), Postives = 262/313 (83.71%), Query Frame = 1 

Query: 1   MIKNSKEENSPPPKLAAAGGSSSSSLAAATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIR 60
           MIKNSKEENSPPPKLAA  GSSSSS   ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIR
Sbjct: 10  MIKNSKEENSPPPKLAA--GSSSSS---ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIR 69

Query: 61  GLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLH 120
           GLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLH
Sbjct: 70  GLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLH 129

Query: 121 YQSMLPP--TVHHPHRSEFKINCIDKAEVKDETELEKQQKSNNNSNNPSHP-SSFSALLN 180
           YQSML P  TV HPHRSEFKI  IDKA V+DET+ +KQ KSN   +NPSHP SSFSALLN
Sbjct: 130 YQSMLSPTTTVVHPHRSEFKI--IDKAGVEDETK-QKQHKSN---SNPSHPNSSFSALLN 189

Query: 181 NVSAPPFGFYWDHNPPSSSTSSSTTTTNNLPFLTSQ--QPQDNNNLHNFNHLNLSL-PSP 240
           NVSAPPFGFYWD NPPS   SSS+TT NNLPFLTSQ     +NNNLH FNHLNLSL PSP
Sbjct: 190 NVSAPPFGFYWDPNPPS---SSSSTTNNNLPFLTSQAGDNNNNNNLHTFNHLNLSLPPSP 249

Query: 241 LS-------LEFNHLHQNFFINNNSLNNTPPNFHPAVRPFHFSMATKFLSQDKNNNNNAD 300
           LS       LEF+ LHQNFFINNN  NN  P+FHP VRPFHFSMATKFLS    NNNN D
Sbjct: 250 LSLSTASPFLEFSQLHQNFFINNN--NNNNPSFHPNVRPFHFSMATKFLSHQDKNNNNVD 305

[Close]
BLAST of Cla010762 vs. NCBI nr
Match: gi|694449624|ref|XP_009350418.1| (PREDICTED: transcription factor TCP13-like [Pyrus x bretschneideri])

HSP 1 Score: 199.9 bits (507), Expect = 6.3e-48
Identity = 148/360 (41.11%), Postives = 188/360 (52.22%), Query Frame = 1 

Query: 21  SSSSSLAA-ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYD 80
           SS+ +L+  +TPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSV TAIQLYD
Sbjct: 29  SSNPNLSRPSTPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYD 88

Query: 81  LQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPI-PSASLGLHYQSMLPPTVH-------- 140
           LQ+RLGLNQPSKVVDWLL+AAK EIDELPPLP+ PS S GL++ S+   + H        
Sbjct: 89  LQERLGLNQPSKVVDWLLDAAKHEIDELPPLPMPPSGSFGLNHPSLGLTSSHGDQSNAHA 148

Query: 141 ---HPHRSEFKINCIDKAE-----------------VKD-ETELEKQQKSN--------- 200
              H H  E   + ID++                  V+D   E E  QK N         
Sbjct: 149 QLSHNHSGEGPRSAIDRSNFWPTGSDALWRAKSKEIVRDTRNEDEGNQKDNLGISDDQEQ 208

Query: 201 -------NNSN----NPSHPSSFSALLNNVSAPPFGFY-WDHNPPSSSTSSSTTTTNNLP 260
                  N+SN    + ++P  F  LLN+ +  P+ ++ WDH+  +S+   S   ++   
Sbjct: 209 AGNNVDGNSSNTFLRSNTNPPFFPGLLNSSTNMPYAYHNWDHSHQTSNFPLSQLGSHGF- 268

Query: 261 FLTSQQPQDNNNLHNFNHLNLSLPSPLSL---------------------EFNHLHQ-NF 293
                   +  +LHNF ++ LSLPS LSL                     +FNHL   N 
Sbjct: 269 ------QSETTDLHNFRNV-LSLPSTLSLSTTQSYFPSHNTAATGEMDPRQFNHLQMLNS 328

The following BLAST results are available for this feature:
BLAST of Cla010762 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TCP13_ARATH1.2e-3854.32Transcription factor TCP13 OS=Arabidopsis thaliana GN=TCP13 PE=1 SV=1[more]
TCP5_ARATH5.7e-3336.84Transcription factor TCP5 OS=Arabidopsis thaliana GN=TCP5 PE=1 SV=1[more]
TCP17_ARATH2.4e-3142.86Transcription factor TCP17 OS=Arabidopsis thaliana GN=TCP17 PE=1 SV=1[more]
TCP2_ARATH1.5e-2536.97Transcription factor TCP2 OS=Arabidopsis thaliana GN=TCP2 PE=1 SV=1[more]
TCP24_ARATH5.7e-2537.66Transcription factor TCP24 OS=Arabidopsis thaliana GN=TCP24 PE=1 SV=1[more]
BLAST of Cla010762 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVZ7_CUCSA3.3e-12882.11Uncharacterized protein OS=Cucumis sativus GN=Csa_4G132680 PE=4 SV=1[more]
B9SNR1_RICCO1.3e-4467.12Transcription factor, putative OS=Ricinus communis GN=RCOM_1026740 PE=4 SV=1[more]
A0A067JTR2_JATCU2.9e-4473.13Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19956 PE=4 SV=1[more]
A0A0D2TIP9_GOSRA2.9e-4443.69Uncharacterized protein OS=Gossypium raimondii GN=B456_012G048500 PE=4 SV=1[more]
A0A022RZ06_ERYGU6.5e-4449.79Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011591mg PE=4 SV=1[more]
BLAST of Cla010762 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778692171|ref|XP_004137255.2|4.7e-12882.11PREDICTED: transcription factor TCP17-like isoform X2 [Cucumis sativus][more]
gi|778692169|ref|XP_011653417.1|4.7e-12882.11PREDICTED: transcription factor TCP17-like isoform X1 [Cucumis sativus][more]
gi|659086667|ref|XP_008444059.1|9.2e-12480.51PREDICTED: transcription factor TCP17-like isoform X1 [Cucumis melo][more]
gi|659086669|ref|XP_008444060.1|9.2e-12480.51PREDICTED: transcription factor TCP17-like isoform X2 [Cucumis melo][more]
gi|694449624|ref|XP_009350418.1|6.3e-4841.11PREDICTED: transcription factor TCP13-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005333Transcription_factor_TCP
IPR017887TF_TCP_subgr
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030154 cell differentiation
biological_process GO:0009694 jasmonic acid metabolic process
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0045962 positive regulation of development, heterochronic
biological_process GO:0031347 regulation of defense response
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009753 response to jasmonic acid
biological_process GO:0008150 biological_process
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla010762Cla010762.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005333Transcription factor, TCPPFAMPF03634TCPcoord: 49..163
score: 1.7
IPR017887Transcription factor TCP subgroupPROFILEPS51369TCPcoord: 49..107
score: 30
NoneNo IPR availablePANTHERPTHR31072FAMILY NOT NAMEDcoord: 1..113
score: 9.0
NoneNo IPR availablePANTHERPTHR31072:SF5TRANSCRIPTION FACTOR TCP13coord: 1..113
score: 9.0