CmoCh13G011000 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGAATTAGGGCACATGGATTTGCAAGACATTCGATCCAAGCCATGGAAGTGCCCAAGGTGCGGTTCGCCCGACACCAAATTCTGCTATTACAATAACTACAATTACTCTCAGCCTCGCCACTTCTGCAAGACCTGCCGCCGCTACTGGACCATCGGCGGTGTCCTCCGCAACGTTCCTGTTGGCGGCGGAAATCGCAAAGCGAAGAACAGCCCGAAGCCGAAGCCGAAGCCGAGGGCTGCAATGATCGTGAGAGATTCGCCGTCGTCGAAATCGAATTCGTGGAAGTCCGATTTGGAAATCCTCCCGTCGCCGCTGAGGTTGAATCAGGCGGGTGATTGGTACGGTTGGATTGAGACTGGAAGGGAGGCGGAGAAAGGGGCGAGGGATTTGGATCGTTGGATCATTTGCCGACGAGTGATGAAACCGAATGAATGGTTGAGATTACCGGTGGCGTCGCAATCGGAAATCACAACTATTTAA ATGGGAGAATTAGGGCACATGGATTTGCAAGACATTCGATCCAAGCCATGGAAGTGCCCAAGGTGCGGTTCGCCCGACACCAAATTCTGCTATTACAATAACTACAATTACTCTCAGCCTCGCCACTTCTGCAAGACCTGCCGCCGCTACTGGACCATCGGCGGTGTCCTCCGCAACGTTCCTGTTGGCGGCGGAAATCGCAAAGCGAAGAACAGCCCGAAGCCGAAGCCGAAGCCGAGGGCTGCAATGATCGTGAGAGATTCGCCGTCGTCGAAATCGAATTCGTGGAAGTCCGATTTGGAAATCCTCCCGTCGCCGCTGAGGTTGAATCAGGCGGGTGATTGGTACGGTTGGATTGAGACTGGAAGGGAGGCGGAGAAAGGGGCGAGGGATTTGGATCGTTGGATCATTTGCCGACGAGTGATGAAACCGAATGAATGGTTGAGATTACCGGTGGCGTCGCAATCGGAAATCACAACTATTTAA ATGGGAGAATTAGGGCACATGGATTTGCAAGACATTCGATCCAAGCCATGGAAGTGCCCAAGGTGCGGTTCGCCCGACACCAAATTCTGCTATTACAATAACTACAATTACTCTCAGCCTCGCCACTTCTGCAAGACCTGCCGCCGCTACTGGACCATCGGCGGTGTCCTCCGCAACGTTCCTGTTGGCGGCGGAAATCGCAAAGCGAAGAACAGCCCGAAGCCGAAGCCGAAGCCGAGGGCTGCAATGATCGTGAGAGATTCGCCGTCGTCGAAATCGAATTCGTGGAAGTCCGATTTGGAAATCCTCCCGTCGCCGCTGAGGTTGAATCAGGCGGGTGATTGGTACGGTTGGATTGAGACTGGAAGGGAGGCGGAGAAAGGGGCGAGGGATTTGGATCGTTGGATCATTTGCCGACGAGTGATGAAACCGAATGAATGGTTGAGATTACCGGTGGCGTCGCAATCGGAAATCACAACTATTTAA
BLAST of CmoCh13G011000 vs. Swiss-Prot
Match: DOF57_ARATH (Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 9.9e-24 Identity = 52/84 (61.90%), Postives = 60/84 (71.43%), Query Frame = 1
BLAST of CmoCh13G011000 vs. Swiss-Prot
Match: DOF54_ARATH (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4 PE=2 SV=2) HSP 1 Score: 107.8 bits (268), Expect = 1.1e-22 Identity = 50/65 (76.92%), Postives = 53/65 (81.54%), Query Frame = 1
BLAST of CmoCh13G011000 vs. Swiss-Prot
Match: DOF31_ARATH (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1 PE=2 SV=2) HSP 1 Score: 107.5 bits (267), Expect = 1.4e-22 Identity = 51/81 (62.96%), Postives = 61/81 (75.31%), Query Frame = 1
BLAST of CmoCh13G011000 vs. Swiss-Prot
Match: DOF22_ARATH (Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2 PE=2 SV=2) HSP 1 Score: 107.1 bits (266), Expect = 1.9e-22 Identity = 54/107 (50.47%), Postives = 66/107 (61.68%), Query Frame = 1
BLAST of CmoCh13G011000 vs. Swiss-Prot
Match: DOF17_ARATH (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7 PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 2.4e-22 Identity = 44/60 (73.33%), Postives = 47/60 (78.33%), Query Frame = 1
BLAST of CmoCh13G011000 vs. TrEMBL
Match: A0A0A0LTJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G039960 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 2.1e-28 Identity = 74/123 (60.16%), Postives = 85/123 (69.11%), Query Frame = 1
BLAST of CmoCh13G011000 vs. TrEMBL
Match: A0A0S3RH47_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G276200 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.2e-23 Identity = 56/91 (61.54%), Postives = 65/91 (71.43%), Query Frame = 1
BLAST of CmoCh13G011000 vs. TrEMBL
Match: A0A0L9UC59_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g030200 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.2e-23 Identity = 56/91 (61.54%), Postives = 65/91 (71.43%), Query Frame = 1
BLAST of CmoCh13G011000 vs. TrEMBL
Match: Q0GLC9_SOYBN (Dof22 OS=Glycine max PE=2 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.6e-23 Identity = 55/91 (60.44%), Postives = 63/91 (69.23%), Query Frame = 1
BLAST of CmoCh13G011000 vs. TrEMBL
Match: I1JWL7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G158800 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.6e-23 Identity = 55/91 (60.44%), Postives = 63/91 (69.23%), Query Frame = 1
BLAST of CmoCh13G011000 vs. TAIR10
Match: AT5G65590.1 (AT5G65590.1 Dof-type zinc finger DNA-binding family protein) HSP 1 Score: 111.3 bits (277), Expect = 5.6e-25 Identity = 52/84 (61.90%), Postives = 60/84 (71.43%), Query Frame = 1
BLAST of CmoCh13G011000 vs. TAIR10
Match: AT5G60850.1 (AT5G60850.1 OBF binding protein 4) HSP 1 Score: 107.8 bits (268), Expect = 6.1e-24 Identity = 50/65 (76.92%), Postives = 53/65 (81.54%), Query Frame = 1
BLAST of CmoCh13G011000 vs. TAIR10
Match: AT3G21270.1 (AT3G21270.1 DOF zinc finger protein 2) HSP 1 Score: 107.5 bits (267), Expect = 8.0e-24 Identity = 51/81 (62.96%), Postives = 61/81 (75.31%), Query Frame = 1
BLAST of CmoCh13G011000 vs. TAIR10
Match: AT2G28810.1 (AT2G28810.1 Dof-type zinc finger DNA-binding family protein) HSP 1 Score: 107.1 bits (266), Expect = 1.0e-23 Identity = 54/107 (50.47%), Postives = 66/107 (61.68%), Query Frame = 1
BLAST of CmoCh13G011000 vs. TAIR10
Match: AT1G51700.1 (AT1G51700.1 DOF zinc finger protein 1) HSP 1 Score: 106.7 bits (265), Expect = 1.4e-23 Identity = 44/60 (73.33%), Postives = 47/60 (78.33%), Query Frame = 1
BLAST of CmoCh13G011000 vs. NCBI nr
Match: gi|659068739|ref|XP_008445935.1| (PREDICTED: dof zinc finger protein DOF3.4-like [Cucumis melo]) HSP 1 Score: 139.0 bits (349), Expect = 7.1e-30 Identity = 72/122 (59.02%), Postives = 85/122 (69.67%), Query Frame = 1
BLAST of CmoCh13G011000 vs. NCBI nr
Match: gi|449439667|ref|XP_004137607.1| (PREDICTED: dof zinc finger protein DOF1.7-like [Cucumis sativus]) HSP 1 Score: 133.7 bits (335), Expect = 3.0e-28 Identity = 74/123 (60.16%), Postives = 85/123 (69.11%), Query Frame = 1
BLAST of CmoCh13G011000 vs. NCBI nr
Match: gi|698589219|ref|XP_009779672.1| (PREDICTED: dof zinc finger protein DOF5.4-like [Nicotiana sylvestris]) HSP 1 Score: 119.4 bits (298), Expect = 5.8e-24 Identity = 59/81 (72.84%), Postives = 62/81 (76.54%), Query Frame = 1
BLAST of CmoCh13G011000 vs. NCBI nr
Match: gi|729300674|ref|XP_010519068.1| (PREDICTED: dof zinc finger protein DOF5.7 [Tarenaya hassleriana]) HSP 1 Score: 119.0 bits (297), Expect = 7.6e-24 Identity = 59/106 (55.66%), Postives = 68/106 (64.15%), Query Frame = 1
BLAST of CmoCh13G011000 vs. NCBI nr
Match: gi|920696879|gb|KOM40104.1| (hypothetical protein LR48_Vigan04g030200 [Vigna angularis]) HSP 1 Score: 117.9 bits (294), Expect = 1.7e-23 Identity = 56/91 (61.54%), Postives = 65/91 (71.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |