CmoCh13G011000 (gene) Cucurbita moschata (Rifu)

NameCmoCh13G011000
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionDof-type zinc finger DNA-binding family protein
LocationCmo_Chr13 : 9041440 .. 9041925 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGAATTAGGGCACATGGATTTGCAAGACATTCGATCCAAGCCATGGAAGTGCCCAAGGTGCGGTTCGCCCGACACCAAATTCTGCTATTACAATAACTACAATTACTCTCAGCCTCGCCACTTCTGCAAGACCTGCCGCCGCTACTGGACCATCGGCGGTGTCCTCCGCAACGTTCCTGTTGGCGGCGGAAATCGCAAAGCGAAGAACAGCCCGAAGCCGAAGCCGAAGCCGAGGGCTGCAATGATCGTGAGAGATTCGCCGTCGTCGAAATCGAATTCGTGGAAGTCCGATTTGGAAATCCTCCCGTCGCCGCTGAGGTTGAATCAGGCGGGTGATTGGTACGGTTGGATTGAGACTGGAAGGGAGGCGGAGAAAGGGGCGAGGGATTTGGATCGTTGGATCATTTGCCGACGAGTGATGAAACCGAATGAATGGTTGAGATTACCGGTGGCGTCGCAATCGGAAATCACAACTATTTAA

mRNA sequence

ATGGGAGAATTAGGGCACATGGATTTGCAAGACATTCGATCCAAGCCATGGAAGTGCCCAAGGTGCGGTTCGCCCGACACCAAATTCTGCTATTACAATAACTACAATTACTCTCAGCCTCGCCACTTCTGCAAGACCTGCCGCCGCTACTGGACCATCGGCGGTGTCCTCCGCAACGTTCCTGTTGGCGGCGGAAATCGCAAAGCGAAGAACAGCCCGAAGCCGAAGCCGAAGCCGAGGGCTGCAATGATCGTGAGAGATTCGCCGTCGTCGAAATCGAATTCGTGGAAGTCCGATTTGGAAATCCTCCCGTCGCCGCTGAGGTTGAATCAGGCGGGTGATTGGTACGGTTGGATTGAGACTGGAAGGGAGGCGGAGAAAGGGGCGAGGGATTTGGATCGTTGGATCATTTGCCGACGAGTGATGAAACCGAATGAATGGTTGAGATTACCGGTGGCGTCGCAATCGGAAATCACAACTATTTAA

Coding sequence (CDS)

ATGGGAGAATTAGGGCACATGGATTTGCAAGACATTCGATCCAAGCCATGGAAGTGCCCAAGGTGCGGTTCGCCCGACACCAAATTCTGCTATTACAATAACTACAATTACTCTCAGCCTCGCCACTTCTGCAAGACCTGCCGCCGCTACTGGACCATCGGCGGTGTCCTCCGCAACGTTCCTGTTGGCGGCGGAAATCGCAAAGCGAAGAACAGCCCGAAGCCGAAGCCGAAGCCGAGGGCTGCAATGATCGTGAGAGATTCGCCGTCGTCGAAATCGAATTCGTGGAAGTCCGATTTGGAAATCCTCCCGTCGCCGCTGAGGTTGAATCAGGCGGGTGATTGGTACGGTTGGATTGAGACTGGAAGGGAGGCGGAGAAAGGGGCGAGGGATTTGGATCGTTGGATCATTTGCCGACGAGTGATGAAACCGAATGAATGGTTGAGATTACCGGTGGCGTCGCAATCGGAAATCACAACTATTTAA
BLAST of CmoCh13G011000 vs. Swiss-Prot
Match: DOF57_ARATH (Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 9.9e-24
Identity = 52/84 (61.90%), Postives = 60/84 (71.43%), Query Frame = 1

Query: 18  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKP 77
           KCPRC SP+TKFCYYNNY+ SQPRHFCK+CRRYWT GG LRNVP+GGG RK K S     
Sbjct: 42  KCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKS----I 101

Query: 78  KPRAAMIVRDSPSSKSNSWKSDLE 102
           KP ++M    S SS    + S +E
Sbjct: 102 KPNSSMNTLPSSSSSQRFFSSIME 121

BLAST of CmoCh13G011000 vs. Swiss-Prot
Match: DOF54_ARATH (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4 PE=2 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-22
Identity = 50/65 (76.92%), Postives = 53/65 (81.54%), Query Frame = 1

Query: 18  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKP 77
           KCPRC S +TKFCYYNNYN SQPRHFCK CRRYWT GGVLRNVPVGGG RKAK S K K 
Sbjct: 52  KCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKRS-KTKQ 111

Query: 78  KPRAA 83
            P ++
Sbjct: 112 VPSSS 115

BLAST of CmoCh13G011000 vs. Swiss-Prot
Match: DOF31_ARATH (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-22
Identity = 51/81 (62.96%), Postives = 61/81 (75.31%), Query Frame = 1

Query: 18  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKP 77
           KCPRC SP+TKFCYYNNYN SQPRHFCK+CRRYWT GG LRNVPVGGG+R  KN+ K   
Sbjct: 30  KCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSR--KNATK--- 89

Query: 78  KPRAAMIVRDSPSSKSNSWKS 99
           +  ++     SPS+ S + K+
Sbjct: 90  RSTSSSSSASSPSNSSQNKKT 105

BLAST of CmoCh13G011000 vs. Swiss-Prot
Match: DOF22_ARATH (Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2 PE=2 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-22
Identity = 54/107 (50.47%), Postives = 66/107 (61.68%), Query Frame = 1

Query: 18  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRK--------A 77
           KCPRC S +TKFCY+NNYN +QPRHFCK CRRYWT GG LRNVPVGGG R+        +
Sbjct: 95  KCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKGKSGNS 154

Query: 78  KNSPKPKPKPRAAMIVRDSPSSKSN---SWKSDLEILPSPLRLNQAG 114
           K+S   + K   +M+   SP++ SN      S    LP+   L Q G
Sbjct: 155 KSSSSSQNKQSTSMVNATSPTNTSNVQLQTNSQFPFLPTLQNLTQLG 201

BLAST of CmoCh13G011000 vs. Swiss-Prot
Match: DOF17_ARATH (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.4e-22
Identity = 44/60 (73.33%), Postives = 47/60 (78.33%), Query Frame = 1

Query: 18 KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKP 77
          KCPRC SP+TKFCYYNNYN SQPRHFCK CRRYWT GG LRN+PVGGG RK+       P
Sbjct: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKRSGSSP 93

BLAST of CmoCh13G011000 vs. TrEMBL
Match: A0A0A0LTJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G039960 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.1e-28
Identity = 74/123 (60.16%), Postives = 85/123 (69.11%), Query Frame = 1

Query: 11  DIRSKP----WKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGN 70
           D +SKP     +CPRC S  TKFCYYNNYNYSQPRHFCKTCRRYWT+GG+LRN+PVGGG 
Sbjct: 2   DFQSKPNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNIPVGGGT 61

Query: 71  RKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEILPSPLRL-NQAGDWYGWIETGREA 129
           RK+K + K K   RA         S  NS  SDL++L SPL+L NQAGD + W   GRE 
Sbjct: 62  RKSKKNSKAK---RATFT-----DSACNS-NSDLDMLSSPLKLNNQAGD-FQW--NGREF 112

BLAST of CmoCh13G011000 vs. TrEMBL
Match: A0A0S3RH47_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G276200 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-23
Identity = 56/91 (61.54%), Postives = 65/91 (71.43%), Query Frame = 1

Query: 15  KPWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPK 74
           +P KCPRC S +TKFCYYNNYN SQPRHFCK CRRYWT GGVLRNVPVGGG RK+K S K
Sbjct: 23  QPLKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSNK 82

Query: 75  PKPKPRAAMIVRDSPSSKSNSWKSDLEILPS 106
           PK     A    DS ++ +N+     +I P+
Sbjct: 83  PK---TTANNTNDSSNNNNNNPSPSSQIAPA 110

BLAST of CmoCh13G011000 vs. TrEMBL
Match: A0A0L9UC59_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g030200 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-23
Identity = 56/91 (61.54%), Postives = 65/91 (71.43%), Query Frame = 1

Query: 15  KPWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPK 74
           +P KCPRC S +TKFCYYNNYN SQPRHFCK CRRYWT GGVLRNVPVGGG RK+K S K
Sbjct: 23  QPLKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSNK 82

Query: 75  PKPKPRAAMIVRDSPSSKSNSWKSDLEILPS 106
           PK     A    DS ++ +N+     +I P+
Sbjct: 83  PK---TTANNTNDSSNNNNNNPSPSSQIAPA 110

BLAST of CmoCh13G011000 vs. TrEMBL
Match: Q0GLC9_SOYBN (Dof22 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.6e-23
Identity = 55/91 (60.44%), Postives = 63/91 (69.23%), Query Frame = 1

Query: 16  PWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKP 75
           P KCPRC S +TKFCYYNNYN SQPRHFCK CRRYWT GGVLRNVPVGGG RK+K S KP
Sbjct: 33  PIKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSNKP 92

Query: 76  KPKPRAAMIVRDSPSSKSNSWKSDLEILPSP 107
           K    AA     + ++ + S  S+     +P
Sbjct: 93  KTTTSAAATTSSNNNNNNPSSSSETAAATAP 123

BLAST of CmoCh13G011000 vs. TrEMBL
Match: I1JWL7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G158800 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.6e-23
Identity = 55/91 (60.44%), Postives = 63/91 (69.23%), Query Frame = 1

Query: 16  PWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKP 75
           P KCPRC S +TKFCYYNNYN SQPRHFCK CRRYWT GGVLRNVPVGGG RK+K S KP
Sbjct: 33  PIKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSNKP 92

Query: 76  KPKPRAAMIVRDSPSSKSNSWKSDLEILPSP 107
           K    AA     + ++ + S  S+     +P
Sbjct: 93  KTTTSAAATTSSNNNNNNPSSSSETAAATAP 123

BLAST of CmoCh13G011000 vs. TAIR10
Match: AT5G65590.1 (AT5G65590.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 111.3 bits (277), Expect = 5.6e-25
Identity = 52/84 (61.90%), Postives = 60/84 (71.43%), Query Frame = 1

Query: 18  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKP 77
           KCPRC SP+TKFCYYNNY+ SQPRHFCK+CRRYWT GG LRNVP+GGG RK K S     
Sbjct: 42  KCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKS----I 101

Query: 78  KPRAAMIVRDSPSSKSNSWKSDLE 102
           KP ++M    S SS    + S +E
Sbjct: 102 KPNSSMNTLPSSSSSQRFFSSIME 121

BLAST of CmoCh13G011000 vs. TAIR10
Match: AT5G60850.1 (AT5G60850.1 OBF binding protein 4)

HSP 1 Score: 107.8 bits (268), Expect = 6.1e-24
Identity = 50/65 (76.92%), Postives = 53/65 (81.54%), Query Frame = 1

Query: 18  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKP 77
           KCPRC S +TKFCYYNNYN SQPRHFCK CRRYWT GGVLRNVPVGGG RKAK S K K 
Sbjct: 52  KCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKRS-KTKQ 111

Query: 78  KPRAA 83
            P ++
Sbjct: 112 VPSSS 115

BLAST of CmoCh13G011000 vs. TAIR10
Match: AT3G21270.1 (AT3G21270.1 DOF zinc finger protein 2)

HSP 1 Score: 107.5 bits (267), Expect = 8.0e-24
Identity = 51/81 (62.96%), Postives = 61/81 (75.31%), Query Frame = 1

Query: 18  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKP 77
           KCPRC SP+TKFCYYNNYN SQPRHFCK+CRRYWT GG LRNVPVGGG+R  KN+ K   
Sbjct: 30  KCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSR--KNATK--- 89

Query: 78  KPRAAMIVRDSPSSKSNSWKS 99
           +  ++     SPS+ S + K+
Sbjct: 90  RSTSSSSSASSPSNSSQNKKT 105

BLAST of CmoCh13G011000 vs. TAIR10
Match: AT2G28810.1 (AT2G28810.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 107.1 bits (266), Expect = 1.0e-23
Identity = 54/107 (50.47%), Postives = 66/107 (61.68%), Query Frame = 1

Query: 18  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRK--------A 77
           KCPRC S +TKFCY+NNYN +QPRHFCK CRRYWT GG LRNVPVGGG R+        +
Sbjct: 95  KCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKGKSGNS 154

Query: 78  KNSPKPKPKPRAAMIVRDSPSSKSN---SWKSDLEILPSPLRLNQAG 114
           K+S   + K   +M+   SP++ SN      S    LP+   L Q G
Sbjct: 155 KSSSSSQNKQSTSMVNATSPTNTSNVQLQTNSQFPFLPTLQNLTQLG 201

BLAST of CmoCh13G011000 vs. TAIR10
Match: AT1G51700.1 (AT1G51700.1 DOF zinc finger protein 1)

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-23
Identity = 44/60 (73.33%), Postives = 47/60 (78.33%), Query Frame = 1

Query: 18 KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPKPKP 77
          KCPRC SP+TKFCYYNNYN SQPRHFCK CRRYWT GG LRN+PVGGG RK+       P
Sbjct: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKRSGSSP 93

BLAST of CmoCh13G011000 vs. NCBI nr
Match: gi|659068739|ref|XP_008445935.1| (PREDICTED: dof zinc finger protein DOF3.4-like [Cucumis melo])

HSP 1 Score: 139.0 bits (349), Expect = 7.1e-30
Identity = 72/122 (59.02%), Postives = 85/122 (69.67%), Query Frame = 1

Query: 11  DIRSKP----WKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGN 70
           D +SKP     +CPRC S  TKFCYYNNYNYSQPRHFCKTCRRYWT+GG+LRNVPVGGG+
Sbjct: 2   DSQSKPDELKCRCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNVPVGGGS 61

Query: 71  RKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEILPSPLRLNQAGDWYGWIETGREAE 129
           RK+K + KPK     A     + +S S    SDL++  SPL+LNQ+GD   W   GRE E
Sbjct: 62  RKSKKNSKPK----RATFTDSACNSNSGVIGSDLDMRSSPLKLNQSGD-SPW--NGREFE 116

BLAST of CmoCh13G011000 vs. NCBI nr
Match: gi|449439667|ref|XP_004137607.1| (PREDICTED: dof zinc finger protein DOF1.7-like [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 3.0e-28
Identity = 74/123 (60.16%), Postives = 85/123 (69.11%), Query Frame = 1

Query: 11  DIRSKP----WKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGN 70
           D +SKP     +CPRC S  TKFCYYNNYNYSQPRHFCKTCRRYWT+GG+LRN+PVGGG 
Sbjct: 2   DFQSKPNELKSQCPRCNSLHTKFCYYNNYNYSQPRHFCKTCRRYWTLGGLLRNIPVGGGT 61

Query: 71  RKAKNSPKPKPKPRAAMIVRDSPSSKSNSWKSDLEILPSPLRL-NQAGDWYGWIETGREA 129
           RK+K + K K   RA         S  NS  SDL++L SPL+L NQAGD + W   GRE 
Sbjct: 62  RKSKKNSKAK---RATFT-----DSACNS-NSDLDMLSSPLKLNNQAGD-FQW--NGREF 112

BLAST of CmoCh13G011000 vs. NCBI nr
Match: gi|698589219|ref|XP_009779672.1| (PREDICTED: dof zinc finger protein DOF5.4-like [Nicotiana sylvestris])

HSP 1 Score: 119.4 bits (298), Expect = 5.8e-24
Identity = 59/81 (72.84%), Postives = 62/81 (76.54%), Query Frame = 1

Query: 18  KCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNS-PKPK 77
           KCPRC SP+TKFCYYNNYN SQPRHFCK+CRRYWT GGVLRNVPVGGG RK+K S PKP 
Sbjct: 35  KCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKSKRSKPKPA 94

Query: 78  PKPRAAMIVRDSPSS--KSNS 96
           P   AA    D  S   KSNS
Sbjct: 95  PPSDAAAEAADEASEEHKSNS 115

BLAST of CmoCh13G011000 vs. NCBI nr
Match: gi|729300674|ref|XP_010519068.1| (PREDICTED: dof zinc finger protein DOF5.7 [Tarenaya hassleriana])

HSP 1 Score: 119.0 bits (297), Expect = 7.6e-24
Identity = 59/106 (55.66%), Postives = 68/106 (64.15%), Query Frame = 1

Query: 10  QDIRSKPWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKA 69
           Q+ + +  KCPRC SP+TKFCYYNNY+ SQPRHFCKTCRRYWT GG LRNVPVGGG RK 
Sbjct: 41  QEQQQQTLKCPRCNSPNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRKT 100

Query: 70  KNSPKPKPK--PRAAMIVRDSPSSKSNSWKSDLEILPSPLRLNQAG 114
           K S   KP     AA     SP    +S K    ++P P+    AG
Sbjct: 101 KRSSAVKPSSIAAAACSTSSSPLFMEDSSKFFHGLVPPPMDFQLAG 146

BLAST of CmoCh13G011000 vs. NCBI nr
Match: gi|920696879|gb|KOM40104.1| (hypothetical protein LR48_Vigan04g030200 [Vigna angularis])

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-23
Identity = 56/91 (61.54%), Postives = 65/91 (71.43%), Query Frame = 1

Query: 15  KPWKCPRCGSPDTKFCYYNNYNYSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSPK 74
           +P KCPRC S +TKFCYYNNYN SQPRHFCK CRRYWT GGVLRNVPVGGG RK+K S K
Sbjct: 23  QPLKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSNK 82

Query: 75  PKPKPRAAMIVRDSPSSKSNSWKSDLEILPS 106
           PK     A    DS ++ +N+     +I P+
Sbjct: 83  PK---TTANNTNDSSNNNNNNPSPSSQIAPA 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
DOF57_ARATH9.9e-2461.90Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7 PE=2 SV=1[more]
DOF54_ARATH1.1e-2276.92Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4 PE=2 SV=2[more]
DOF31_ARATH1.4e-2262.96Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1 PE=2 SV=2[more]
DOF22_ARATH1.9e-2250.47Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2 PE=2 SV=2[more]
DOF17_ARATH2.4e-2273.33Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LTJ9_CUCSA2.1e-2860.16Uncharacterized protein OS=Cucumis sativus GN=Csa_1G039960 PE=4 SV=1[more]
A0A0S3RH47_PHAAN1.2e-2361.54Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G276200 PE=... [more]
A0A0L9UC59_PHAAN1.2e-2361.54Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g030200 PE=4 SV=1[more]
Q0GLC9_SOYBN2.6e-2360.44Dof22 OS=Glycine max PE=2 SV=1[more]
I1JWL7_SOYBN2.6e-2360.44Uncharacterized protein OS=Glycine max GN=GLYMA_04G158800 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G65590.15.6e-2561.90 Dof-type zinc finger DNA-binding family protein[more]
AT5G60850.16.1e-2476.92 OBF binding protein 4[more]
AT3G21270.18.0e-2462.96 DOF zinc finger protein 2[more]
AT2G28810.11.0e-2350.47 Dof-type zinc finger DNA-binding family protein[more]
AT1G51700.11.4e-2373.33 DOF zinc finger protein 1[more]
Match NameE-valueIdentityDescription
gi|659068739|ref|XP_008445935.1|7.1e-3059.02PREDICTED: dof zinc finger protein DOF3.4-like [Cucumis melo][more]
gi|449439667|ref|XP_004137607.1|3.0e-2860.16PREDICTED: dof zinc finger protein DOF1.7-like [Cucumis sativus][more]
gi|698589219|ref|XP_009779672.1|5.8e-2472.84PREDICTED: dof zinc finger protein DOF5.4-like [Nicotiana sylvestris][more]
gi|729300674|ref|XP_010519068.1|7.6e-2455.66PREDICTED: dof zinc finger protein DOF5.7 [Tarenaya hassleriana][more]
gi|920696879|gb|KOM40104.1|1.7e-2361.54hypothetical protein LR48_Vigan04g030200 [Vigna angularis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0044212 transcription regulatory region DNA binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh13G011000.1CmoCh13G011000.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 18..65
score: 3.0
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 16..71
score: 1.1
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 19..55
scor
IPR003851Zinc finger, Dof-typePROFILEPS50884ZF_DOF_2coord: 17..71
score: 27
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 1..91
score: 3.4
NoneNo IPR availablePANTHERPTHR31992:SF33SUBFAMILY NOT NAMEDcoord: 1..91
score: 3.4

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh13G011000Wax gourdcmowgoB0233
CmoCh13G011000Wax gourdcmowgoB0247
CmoCh13G011000Cucurbita moschata (Rifu)cmocmoB052
CmoCh13G011000Cucurbita moschata (Rifu)cmocmoB089
CmoCh13G011000Cucurbita moschata (Rifu)cmocmoB169
CmoCh13G011000Cucurbita moschata (Rifu)cmocmoB171
CmoCh13G011000Cucumber (Gy14) v1cgycmoB0584
CmoCh13G011000Cucumber (Gy14) v1cgycmoB0585
CmoCh13G011000Cucurbita maxima (Rimu)cmacmoB397
CmoCh13G011000Cucurbita maxima (Rimu)cmacmoB399
CmoCh13G011000Cucurbita maxima (Rimu)cmacmoB082
CmoCh13G011000Cucurbita maxima (Rimu)cmacmoB125
CmoCh13G011000Wild cucumber (PI 183967)cmocpiB203
CmoCh13G011000Cucumber (Chinese Long) v2cmocuB201
CmoCh13G011000Cucumber (Chinese Long) v2cmocuB207
CmoCh13G011000Cucumber (Chinese Long) v2cmocuB210
CmoCh13G011000Melon (DHL92) v3.5.1cmomeB191
CmoCh13G011000Watermelon (Charleston Gray)cmowcgB191
CmoCh13G011000Watermelon (Charleston Gray)cmowcgB195
CmoCh13G011000Watermelon (97103) v1cmowmB194
CmoCh13G011000Watermelon (97103) v1cmowmB202
CmoCh13G011000Cucurbita pepo (Zucchini)cmocpeB183
CmoCh13G011000Cucurbita pepo (Zucchini)cmocpeB201
CmoCh13G011000Bottle gourd (USVL1VR-Ls)cmolsiB210
CmoCh13G011000Cucumber (Gy14) v2cgybcmoB067
CmoCh13G011000Cucumber (Gy14) v2cgybcmoB453
CmoCh13G011000Melon (DHL92) v3.6.1cmomedB202
CmoCh13G011000Melon (DHL92) v3.6.1cmomedB216
CmoCh13G011000Silver-seed gourdcarcmoB0626
CmoCh13G011000Silver-seed gourdcarcmoB0698
CmoCh13G011000Cucumber (Chinese Long) v3cmocucB0242
CmoCh13G011000Cucumber (Chinese Long) v3cmocucB0230
CmoCh13G011000Cucumber (Chinese Long) v3cmocucB0234
CmoCh13G011000Cucumber (Chinese Long) v3cmocucB0238
CmoCh13G011000Cucumber (Chinese Long) v3cmocucB0247
CmoCh13G011000Watermelon (97103) v2cmowmbB216