CmaCh13G010560 (gene) Cucurbita maxima (Rimu)

NameCmaCh13G010560
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr13 : 8026232 .. 8026758 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAAGTAGGGCACATGGATTTGCAAGACATTCGATCCAAGCCATGGAAGTGCCCAAGGTGCGATTCGCCCGACACCAAATTCTGCTATTACAATAATTACAATTAGTCTCAGCCTCGCCACTTCTGCAAGACCTGCCGCCGCTACTGGACCATCGGCGGTGTTCTTCGCAACGTTCCTGTTGGCGGCGGAAATCGCAAAGCGAAGAACAGTTCGAAGCCGAAGCCGAAGGCTGCAATGATCGCGAGAGATTCACCGTCGTCGTAATCGAATTCGTGGAAATTCGATTTGGAAATCCTCCCGACGCCGCTGAAGTTGAATCAGGCGGGTGATTGGTACGGTTGGATTGAGAATGGAAGGGAGTCGGAAGGTGGGATTGTGGCTGCGGCAGGGGGATCGGCCGGCGGAGAAAGGGGACAGGGGCGAGGGATTTGGATCGTTGGATCATTTGCCGACAAGTGATGAAGCCGAATGAATGGTTGAGATTACCGGAGGCGTCGCAATCGGAAATCACAACTATTTAA

mRNA sequence

ATGGCAGAAGTAGGGCACATGGATTTGCAAGACATTCGATCCAAGCCATGGAAGTGCCCAAGCCTCGCCACTTCTGCAAGACCTGCCGCCGCTACTGGACCATCGGCGTTCGAAGCCGAAGCCGAAGGCTGCAATGATCGCGAGAGATTCACCGTCGTCGTAATCGAATTCGTGGAAATTCGATTTGGAAATCCTCCCGACGCCGCTGAAGTTGAATCAGGCGGGTGGGATTGTGGCTGCGGCAGGGGGATCGGCCGGCGGAGAAAGGGGACAGGGGCGAGGGATTTGGATCGTTGGATCATTTGCCGACAAGTGATGAAGCCGAATGAATGGTTGAGATTACCGGAGGCGTCGCAATCGGAAATCACAACTATTTAA

Coding sequence (CDS)

ATGGCAGAAGTAGGGCACATGGATTTGCAAGACATTCGATCCAAGCCATGGAAGTGCCCAAGCCTCGCCACTTCTGCAAGACCTGCCGCCGCTACTGGACCATCGGCGTTCGAAGCCGAAGCCGAAGGCTGCAATGATCGCGAGAGATTCACCGTCGTCGTAATCGAATTCGTGGAAATTCGATTTGGAAATCCTCCCGACGCCGCTGAAGTTGAATCAGGCGGGTGGGATTGTGGCTGCGGCAGGGGGATCGGCCGGCGGAGAAAGGGGACAGGGGCGAGGGATTTGGATCGTTGGATCATTTGCCGACAAGTGATGAAGCCGAATGAATGGTTGAGATTACCGGAGGCGTCGCAATCGGAAATCACAACTATTTAA

Protein sequence

MAEVGHMDLQDIRSKPWKCPSLATSARPAAATGPSAFEAEAEGCNDRERFTVVVIEFVEIRFGNPPDAAEVESGGWDCGCGRGIGRRRKGTGARDLDRWIICRQVMKPNEWLRLPEASQSEITTI
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh13G010560.1CmaCh13G010560.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 122..125
scor

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh13G010560CmoCh13G011000Cucurbita moschata (Rifu)cmacmoB218
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh13G010560Wax gourdcmawgoB0240
CmaCh13G010560Wax gourdcmawgoB0254
CmaCh13G010560Wax gourdcmawgoB0285
CmaCh13G010560Cucurbita maxima (Rimu)cmacmaB090
CmaCh13G010560Cucurbita maxima (Rimu)cmacmaB127
CmaCh13G010560Cucurbita maxima (Rimu)cmacmaB213
CmaCh13G010560Cucurbita maxima (Rimu)cmacmaB223
CmaCh13G010560Cucurbita maxima (Rimu)cmacmaB217
CmaCh13G010560Cucumber (Gy14) v1cgycmaB0264
CmaCh13G010560Cucumber (Gy14) v1cgycmaB0583
CmaCh13G010560Cucumber (Gy14) v1cgycmaB0585
CmaCh13G010560Cucurbita moschata (Rifu)cmacmoB209
CmaCh13G010560Cucurbita moschata (Rifu)cmacmoB215
CmaCh13G010560Cucurbita moschata (Rifu)cmacmoB221
CmaCh13G010560Cucurbita moschata (Rifu)cmacmoB224
CmaCh13G010560Cucurbita moschata (Rifu)cmacmoB229
CmaCh13G010560Wild cucumber (PI 183967)cmacpiB217
CmaCh13G010560Wild cucumber (PI 183967)cmacpiB218
CmaCh13G010560Wild cucumber (PI 183967)cmacpiB223
CmaCh13G010560Wild cucumber (PI 183967)cmacpiB226
CmaCh13G010560Cucumber (Chinese Long) v2cmacuB215
CmaCh13G010560Cucumber (Chinese Long) v2cmacuB217
CmaCh13G010560Cucumber (Chinese Long) v2cmacuB221
CmaCh13G010560Melon (DHL92) v3.5.1cmameB193
CmaCh13G010560Melon (DHL92) v3.5.1cmameB207
CmaCh13G010560Watermelon (Charleston Gray)cmawcgB202
CmaCh13G010560Watermelon (Charleston Gray)cmawcgB208
CmaCh13G010560Watermelon (97103) v1cmawmB206
CmaCh13G010560Watermelon (97103) v1cmawmB214
CmaCh13G010560Cucurbita pepo (Zucchini)cmacpeB213
CmaCh13G010560Cucurbita pepo (Zucchini)cmacpeB229
CmaCh13G010560Cucurbita pepo (Zucchini)cmacpeB234
CmaCh13G010560Cucurbita pepo (Zucchini)cmacpeB246
CmaCh13G010560Bottle gourd (USVL1VR-Ls)cmalsiB208
CmaCh13G010560Bottle gourd (USVL1VR-Ls)cmalsiB218
CmaCh13G010560Bottle gourd (USVL1VR-Ls)cmalsiB222
CmaCh13G010560Silver-seed gourdcarcmaB0645
CmaCh13G010560Cucumber (Gy14) v2cgybcmaB072
CmaCh13G010560Cucumber (Gy14) v2cgybcmaB073
CmaCh13G010560Cucumber (Gy14) v2cgybcmaB077
CmaCh13G010560Cucumber (Gy14) v2cgybcmaB483
CmaCh13G010560Melon (DHL92) v3.6.1cmamedB214
CmaCh13G010560Melon (DHL92) v3.6.1cmamedB227
CmaCh13G010560Melon (DHL92) v3.6.1cmamedB232
CmaCh13G010560Silver-seed gourdcarcmaB0540
CmaCh13G010560Silver-seed gourdcarcmaB0721
CmaCh13G010560Silver-seed gourdcarcmaB0832
CmaCh13G010560Cucumber (Chinese Long) v3cmacucB0244
CmaCh13G010560Cucumber (Chinese Long) v3cmacucB0248
CmaCh13G010560Cucumber (Chinese Long) v3cmacucB0252
CmaCh13G010560Cucumber (Chinese Long) v3cmacucB0259
CmaCh13G010560Watermelon (97103) v2cmawmbB233
CmaCh13G010560Watermelon (97103) v2cmawmbB240
CmaCh13G010560Watermelon (97103) v2cmawmbB245