CmoCh13G008670 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G008670
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Plastid ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase-related protein
Location	Cmo_Chr13 : 7910169 .. 7919597 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTAAAAAATGGGAGGGAACGCGGAGGCGGGGAGCTGAAGTGGATAACGTTCTTCTGCAAAACATACAGCAACCTTTTGCGCTGCTCTGCTGTTGATCGGTACCTCTAATGGCGAATTCTATCTCCTTCCATCAGCCCACTCATCGCTTCATCTCCTGCCCGCAGGTCCTTTCTTCCGTTCTCGCTATGTCAACAAACCTTTCTCCTTGTTCGCTTCTTCATTTTTTGTTTTCTTTCTCTCTATTATGGATGCAGGTGAAGGATTTCCGGTCTTTCTCCTCACCAAGATTCAGTAACTATCCGTCCACTTCCCCTAAAAGCAGATTGCGGCCGATTAAAGCTGCAACCGAAACCGCCGCATTTCCTCTTCTACAACCTCCGAAAGCCGACGAATCTTCTCCTTCTGAGGTCCGTAAAGTTCTTTGCCAATCAAATGTGTTATATTATTTACTTTTCGTATTCCATGAATAATTTTGTAAAATGATTTGACATCCTCGTGCGTTGGGTTAACGTTGAATCTTAATGACTGATTTTCCCCCTTGAAACTTCCGCAGTTGGAACCAGCAGACCCTGATTTCTATAAGATAGGATTTGTTAGAAGTATGCGAGCTTATGGAATCGAATTCAAAGAAGGGCCTGATGGGTTTGGTGTATATGCTTCCAAAGATGTTGAACCTCTTCGCCGTGCTAGGGTCAGTTTCATACGTTGCTTCTCAAATTCTCAGTTCTGTTCAAACGCATCGTCTTTTACAGACCTTGGTTGCTATTTATTGGTTGTGATAACTAACAATGGTGTCTTCTTTATCTATTGGTTCACAGGTAATCATGGAAATTCCATTAGAACTAATGTTAACCATAAGCCAGAAACTCCCCTGGATGTTTTTCCCTGATATAATTCCAGTGGGTCATCCGATATTCGATATAATTAATTCGACAAATCCAGAGGTACATGAACTTTTCATAAGATTGAAGATAATATTTCTGAGCTCAGTTTCGTTGATTTGGTTTATGCCTTTGGCTCCTACCTGGTTCTGATATTTTATCCCATTCAATTTGAATACACTCTCAGTTAGCATATTTTGTTTAGATGAATACCAACCTGTTATTATTTTTATTGATTTCGTTCTTTTGTTTGTAAATGACTGATATAAGGCATATCTTTGGATGGCAGACTGATTGGGATCTAAGGTTAGCGTGTCTTCTGTTGTATGCATTTGATCGAGATGACAACTTTTGGCAGCTCTATGGTGATTTTCTACCAAGTATTGACGAATGTACAAGCTTACTTCTAGCCTCCGAGGTAGAAAATATGTTTTGTGCCTAACGAGTTGATGCATTTCATTTCATTTAACCAACTATAAAAGTATAATATGATCTAATGAGTCAACATGAACATAGCTCAATTTGTTAAGACTTATACTGGGAGATACCACATCAGTTGGAGAGGAGAACGAAACATTTTTTATAAGAGTGTGGAAACCTCTCCCTTGTGGACGCGTTTTAAAACCTTGAGGGGAAGCTCGGAAGGGAAAGCCCAAATAGGATAATTTCTGTTAGTGGTGGGCTTGGGCTATTACAAATGGTATTAGAGCTAGGCACCAAGTGGTGGGCTATCGAGGACGCTAGGCCCCGAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAATGAAGAATTGGATGTGGAAACCTCTCCCTAACAGCTTGAGGGGCAGCCCGGAAGGAAAAGCCCAAAGAAGACAATATTTGCTAGCGGTGGGCTTAGGCTGTTACATATACTATCGACTAGGAGGGTAAGAAAATCCTCCGTCCGTCCACTTATGTTTTTCCATAGTAACTTCTTAACTAGTGTCAGAAGGGAGAATTAGTGATTAAACAATATTGGTATTAGCCGTTATGCCATCAATATTTACTTGTTTTCTCTCCAATCCTCTATTTGTTTTAAGGGAGAATTAGTATTCTTGTCCTTTGATCAATTCATTTCTCATCAGTTTTATGGTTCCTTAATGAGTAACTTGTGTTATTTGAAATCTGTTATGCATTTTAGGAAGAACTTTTGGAGCTGCAGGATCAAAATCTTGCTTCATCGATCAGAGACCAGCAGCATCGTGCTTTAGATTTCTGGGAAAGGAACTGGGTAAATTTTCTGTTACATGGATGGAATGTGCTATTAATTTTCCATTATACAAATGTTTTACAACTTTGTTGCTATAATCCTACAGCACAGTGGTGTACCCCTTAAGATTAAGCGGCTTGCTCGAGATCCTAAACGATTCATTTGGGCTGTGAGTATAGCACAATCACGATGCATAAACATGCAAACAAGGATCGGAGCTTTAGTACAAGATGCAAATATGCTAATTCCTTATGCTGGTAAACTTCTGGACAACAAACATAAAGTCGTGTTTATATATCATGTTTTGCAATTGCTCTGTTTTTGGACAAGAATCAACGTTACAGAACCGTTGGCAACATTTTCATTAGAATTAAAGGCTGAGATGCCTCAAAATGCATCACGGGATTAGTATATGTCACATACCTTTTGGCGTCCTTCGAGTATATTACACTAATTGTGTATTTTTCTTAACTATATTATGCAGATATGCTGAATCATTCTTTCCGACCAAATTGTTTTTTCCACTGGCGTTTTAAGGATCGGATGCTTGAGGTGATGATAAATGCTGGGCAGCAGATCAAAAAAGGGCAAGAGGTTTCTCATTGTCTTATTATATTCAAATTTAGCAATGTCCCTGCATAACTCAATCTTATATGAAAGCATGTTGGTTGCATCATTGCAAAAAGTTCTCCGTTTCAAGCACTCAAAAGTGTGTAAGCATCTATCTATTATGGAGAGGTTTCTAAGGAATGTTCGTTCCCCTCTCCAACAGATGTGGGATCTTACAATAAAAATTTATGGAAGTATCATCAACTGGTCCCAGCGAGGCTCGAACTCGCGACCTCCGGCTCATAAGACCAGCGCTCTAACCAAATGAGCTACGGGACCTATTGATTCTTTCAGAAATTTTTATTGGGAGGAGTACGAAACATTCCTTATACGGGTGTGGAAATCTCTCCCTAATAGACGCAACATAATGAGCTAAAACGGACAATATCTGTTAGCCCAAAGCGCCAAATTTAGTTCTTCTTGCAGACACCAAATTAGTCGAACTTGTTGCAAAATCTTGGCCAACTTTCCACAGCCAAGGAACAGCAAAGAAAAAAAAGAAAAAGAAGATGGTTGATGGTTTTATTTTTCGTCCTACAGTAAATACTAACTGGGGGAATGAGGGTGATATGAGAATTTTTCTTTTGGCCTTTGTCTTAGAGGTCTATGCTTTTGTAAGCAAGAGATCAAATTTACATTGTATATTTTCTTGAAGTATCAAATTTTATTTGCAGATGACAGTCAATTACATGAATGGCCAAACGAACGACATGTTTCTGCAGAGATATGGTTTTTCATCGTCTGTGGTAATTTGATCTCCACCACAACTTTCCAAATATATTTGACTTAATGATGGGATTTATTTCATGTAAACATCTAACATGGGGAACTGCAGAACCCTTGGGATATGATCGAGTTCTCCGGGAATGCGCGTATTCACTTAGATTCGTTCTTATCAGTTTTCAACATAGCTGGGCTTCCTGATGGTTATTACTACAATGGTATTGTTAATGAAAACTTTCTTTTGTTTACCTCTTTGGTTTACGAAGTGCTGAACAAACTGACCAAATGACGATCGCAGGTCGGTTATCGAACGAGGAAGATACATTCGTTGATGGAGCGGTAATCGCAGCAGCAAGATCTCTGCCTTCATGGTCAGATGGAGATATCCCACCTAGCCCAAGCAGGGAGAGGAAAGCAGTTAAAGAGTTACAAGAAGAATGCCAACGGATGCTCGCAGCATTCCCGACCACATCAGAACAAGACCAAAAAATCCTAGGTACGCCATGCAGTCCTTGCCTTCTCCCAAAGTTAAATGCAAACCACTAAAAAACCTCAAGATCTTCTTATATTTGAAGATATTAATAATACCTTATGACGTTGCTGTTTGATACAACCAACAGATTCTATGCCACAAGCTACAAGAACGCTAGAAGCCTCGATCAAGTACGCATTATCTTCTTCTATCTAAAGCTGATTTTATGATATCATTTATGGAGTTTCATCAAGTTCCCATTTGTTTTCATGGCTGCAGATACAGATTGCACCGAAAGTTGTTCATGGAGAAAGTGATCAAGGCATTGGATGTCTATCAAGAACGGATACTGTTCTAGTTCTGCAAATTTTCTACTGCAATTTGAGCTTAGCAGGTATTATATTGGTAACTGCATGAAATTGTGTTTCATTCCCTGTAAAGATGTTGCTGTAGCTACATAAATTTCATAAAGTAAATTCAGTTATTAGTCGTTATTAATTGTAGCATCGACGGGAAAAATTTGATAATCTTGAATGGTTGCCACTTTGTTATATTTCTTATCCATTTGTTTGTAATCTAATTCTGCAAATAAACATATTATCTTTGTTCTGTGAATATAAAGGATTTAATTCAAGTTCATACTTCATAGCTCAGATCAGCTTTACCGGTTGGTTGGTTCGATTATTTAAAAAAGAGAACCAAACCTTTTCGGCTTGGTTTAATGCAACCAAGCTAATGAATACCAAACCGGTCAGTAATAAATATTTTTAAGAAACACAGATTTTACTCAAATTTTACCCGAACTTGGTAAATTGTATTGATTTTTACCCAAAAAAATAAAATAAAATAAAATTAGTTTTTTTTTTTTTTTTTGCAAGATTTCACCTACTATATTTTTATACAAAAAGTAAAGTAAAAACTTTTTAAAACTAACTAATTTAAATAAAAATTAAGCCCTAAATAAGCCCACAATTTTAAATAAACAGATATTTCATATGAAAATTAATTTGAAGGTAAAATTCATGACATTTAATTAAATTTAAAGTAAATTTTGGAGTAAAAATAAATAAATGCGTAAATAATGATATTTTTCCTAAATATTAGTCTGGACTTCAAACCGTGAATGTTGGTTCGGTTTTCGGTTTAGGCAAAATTCAAGAAAACCAAACCAAACCAAACCAAGGTTTACTCATGGAGAGGGGTTTTAAGATAAAACGACTCTGTACTCCGCTGATGATCTCTGGACGCTCTCCACCCTTGGCGGCGGCGGCGATTACCTCCCCAACCAATCAAGCTTGCAAATTTTGCACTTCCAGACTCTCTGCGACTGGTATGTTGATTTTTTTCCATGATTTTATATATTTTATTTGCTATATTTCTATTTATATTATGTTAAGAAATGGGAAAGGAAAGAAGTGTAGACTCCATCTTTCTTTCCCTTTTCTGTGTTTCCATCGCCGATCGATGATCCCCGCACACTCCACCGCCACTTTTTATCCTCTTATTGTCTCACTTTTGCTGCAACCTGACGCCACCACGCCAACCTCGTCTTCTGCTGCAGCACTCCATCAATCGGTCAATTGCATTCGATCTGAAATAGGGTCCGTATAGTCTAACCTAGGGTACTCGAGGATTGGATGATATAATGCTCAACGAACTTCGCTTCTTGACTAAGCTGTGAACTTGTGAAAACCTGCTGAGACATCTAAGTTACGTTCTTGTTATTGAGATAATAATCGCCTGTCAGTTCTAATTCTAATTTCTAGGATTATTTCTAAGTGAGAACCGATTTTGATTGCTCTGCAAATTCTTATTGATAATAGGATCACCATGGCTTCAATTTTTGTTCTATTCCCGTGAAATTTTTATAATACGAAACTATTAATTAGCATACTGCGTGGTGTAGAGCAATTGAAAATGACCCATTTCGATATGGATGCACTGTCAAGCAATGTGAAGTGTTTGGTTTATGAGCCTTAGAGCTTCATTGTTGAGTCCGATATTTTGTATGATTCTTCATTGATTTTCCTTAGTACTTCTTTGGAACTTGGAATTAGGGATTGAGAACCAATAACATTTCATATTACTGGACACTTTATACCCCCAAGAAAGTATTGATATCGCAAGTGAAACTTTCTATTTGAAGGTTGGACAAAAGGCTCGTTTACATTCTTTGTCATCATTATCTAGTGAGAAGTTTCAGTAGGTTTGGTGTTGGATAGTTCTAATTCACCAGTTGAAGCTTCTAATGCTTAAAACATGTTTTTGCATACTAAAATCCTGTAAGTGTTCCCTTGGTGATGTGCATAGGGAAAACTTGAAGAGAGGATGGCTACGAATAGCCTGAAGGGTATGATTGCTGCAGCACTCAATAAGGGAGTAACAGAAGCAAGGGCAAGGATATTTGGTCACGTACTTAACCCGACAGGTCAACGATCTACCCACAAGCTTCTGCGCAAAAAACTCATCGGTGACAAAGTAGCAGAGTGGTATCCATATGACATCAAGAAGGATGATCCTCTTATCATGGCTCGTCAAGAACAAGAGTACACTCTCTTTCTATTTTTCTCTGCCATGAGCTAGACATACCATTTGAACAAATTTTTTATGCATAAGATGTAGATTTTCTCCATCAATATATTGGGTGATATTAGGATAAGGAGTGATTTGTAGGAAGGTCATATGTGTTTAGCTTGGAAAATGGGGGGATGGGGGCTAGTGTACTACGGTAGCACGGAAAATTTCCCATTTCATTGCTTGCCATACTAGTAGAATTTACGAATAATGTAGGTTCCATGAAATAAATTAATATATCGACAGAAGTTTTTCCTAACAGATTTGTCTCAATATTCTGATCGTCTGCAATCTACTTTGCTAGGCGCTTGTCGAAGCTTGAAATGCTGAAGCGGCGTGGTAAGGGACCACCTAAGAAGGGTCAAGGCAGGCGTGCAGCCAAGCGCAACAAGTAGAGACAATGACAGTGGAATTGTTCCTGCTAAGGCTTTATCTTTTTGTTGTTTTTTCCTGCCTAAAGTTTAGGTTATGGACCAGTTTCTCGTAGTTGTAACGACTTCTATTCATTATAAGCGATATTTACTCTGAAGATTCTTCGTTCATAATTGAGCGCCCTTGAAGCAAAGTAATACATACTATATTATGCAAAAAGCCAGAAACAGAGCAGCGCACCATGCGTAGTCTGGAAACAAAAGGCATTAATAGAACAGTATACTTGTATGTTGGAGAGAACCAACTGCTAGAATTCATTACTAGAGCTTTGTTTCGTGAACAATTCATTGACTGCAAATTGATTAGGAATGATAATTTGATTGCCTTGGAGCTGAAATGCGGTTCATTTTCCTCCCAAGATCAAAATCTAAGGTCCTGCACTGGGCGTGGTTTCTTCATTGATCTGCTTTTGGGTCATTAATTTGTCGTCTTGATGAGCCATATCATAGGTTGCATGAAGACCAAAGAAAACATAATAGATAAGCATCACCAGTGTGCAGATTCCAAATCTTTCAAAAGCCTCAGGACCCAATGATCCCATGAGAAAGACGTTGGTTGCAATCGACAAACTCGGCAGCCATGGCACGAGAGGTACGCCCCAAACTTTTGGCTTTCTTTGCATTGGCAGAAGCAATGAAATCCCCAACGTCCCTAGAAACCATATGGGAACGGTCACGACGTATCCTACCCAACCATTTGGGTAAAGCCCCCAGTATGCAGAAGTTGCCATGGAGGAAGCAATGATGGTTATCAGTAGAATGAAAAGCTTCAACTGGTGTGACCGTGGAGTGACCCCTCTTGCATAGTATCTCCTGACCAGAAGCGCCACGGCCATCATCATAAAGACGAACAGCGTGCTGACCGACAACAAGCTCGCCAGAACATCCAAGCTAGAGAAGAAAGCAACTGAACCACTTGCTACGGTTATCAACAGTGTAGCATTAATCGGAGTTCCAGTCTTTGGATGAACAAGAGCAAACCAAGGAGGAATCATGTGAGCTCGAGCAATGTGCGTTATATACCGACCTTGCCCGAGCGCCCCAACCAGAAGAACAGTAGTCATCCCCTTCAGAGCACCAAGAGCCACCAAATACTTAGCCCATTTCATTCCAACACTCTCAAAGGCAACAGAGTAGGCTGCATCTGGGTTGATATCAGTATACTTCTGCATCATACTCAGCGACAGAGCCATCAGACAGTATATCACAGTGATAACCGACATTGATCCCAACAATCCCAAAGGTATGTCTTTTGATGGATTTTTAGTTTCCTCAGCCATTGTAGCAATGTTATCAAAACCCCCATATGCAAAGTAAACAATTGCAGCAGCTTGGAACACTCCTTTAACCCCAAATGGCACAAAAGGAGTCAAATTTGATTTATCAGCATGTACGAAACCAGCAATTATAACAAACAGAATCACCACTGTATTAACAGCAGAAGCAATCCAATTCAGGTATGAAGTTTTCCGCGTGCTGATCATCGCTATCGTTGCAGCGATCGTCAAGACCCCAACAGCAATTGGGTCAAGAAGATTGAACCCATCTTTCAGATTCGTGTGGATACGCAACGAATTGTCGGGTCTGTCCAGCAGCGAGGTTAAGTAAGAAGTCCAAGCTCGAGCGACAGCGGCGGTACCGACAATGCTCTCGAGGAGAATGTTGCCAGCAGTGATGAAAGCAGCAAAGTCCCCCAATTCAATCCTCAGGTAAGCAAAAGAGCCCCCTGCAACTGGGATTTCAACGGCGAACTCTGTATAGCAAAAAACAGAGAGCATTGCAGAAACACCGGAAGCTACATAGGACAAAACAATGGCTGGTCCAGCATGTTTATTGGCTTCTTGACCGGTAAGAACGAAGATCCCTGCACCAATTACAGCCCCAAATCCAAACCAGGTGAGATCCCACCAAGTTAAGCAGCGTTTCATTTCATTCTCACTTCGTTTTCTTAGCTCCCCGATTTCATTTTCGTCAAATGATCTGCTTTGAAGACGGTCCATGAACCGAAACCATGTCTGAGACAGAGCAGTCCGGTAATTGCTCAAGCTCTGGAAGGATTCTTCCGGCAAGAAATCTTGTTTGCTCCATCTCCACCAATAGCTTCTCTGCTGCTGAACAATATCGTCGCCCATTCTGCTCTCTATGGAAATGGGCATGTGACAACGTCGTCTATATAGAGTTTAGATCCGTGAGCAATGTGGGCACTGGCTAATGGTTAGGAGGGGGGGTTTCGAAGATGCCGATGGTGGGCTTGGATTGATGTTGCTTGTCTCGTAGCTCCAACCCGAAAATGACCGTCTTACAGAAATATCTGAATGCTCCCATTGACGTTAGGATCGAAGACTTCCAAGTCAACTACTTTGGCTGTGCTTGGTTGTTGCTCAATCTCATCAATTCTTTCATTGACTTTTATGCTTACTCTGTTTTCTGGTTTCTGTAGGATTATATAATCTTTTCCAAATATTCTCATGTTTACTGTGTAGCTGCTTGTCTTCCA

mRNA sequence

TCTTAAAAAATGGGAGGGAACGCGGAGGCGGGGAGCTGAAGTGGATAACGTTCTTCTGCAAAACATACAGCAACCTTTTGCGCTGCTCTGCTGTTGATCGGTACCTCTAATGGCGAATTCTATCTCCTTCCATCAGCCCACTCATCGCTTCATCTCCTGCCCGCAGGTGAAGGATTTCCGGTCTTTCTCCTCACCAAGATTCAGTAACTATCCGTCCACTTCCCCTAAAAGCAGATTGCGGCCGATTAAAGCTGCAACCGAAACCGCCGCATTTCCTCTTCTACAACCTCCGAAAGCCGACGAATCTTCTCCTTCTGAGTTGGAACCAGCAGACCCTGATTTCTATAAGATAGGATTTGTTAGAAGTATGCGAGCTTATGGAATCGAATTCAAAGAAGGGCCTGATGGGTTTGGTGTATATGCTTCCAAAGATGTTGAACCTCTTCGCCGTGCTAGGGTAATCATGGAAATTCCATTAGAACTAATGTTAACCATAAGCCAGAAACTCCCCTGGATGTTTTTCCCTGATATAATTCCAGTGGGTCATCCGATATTCGATATAATTAATTCGACAAATCCAGAGACTGATTGGGATCTAAGGTTAGCGTGTCTTCTGTTGTATGCATTTGATCGAGATGACAACTTTTGGCAGCTCTATGGTGATTTTCTACCAAGTATTGACGAATGTACAAGCTTACTTCTAGCCTCCGAGGAAGAACTTTTGGAGCTGCAGGATCAAAATCTTGCTTCATCGATCAGAGACCAGCAGCATCGTGCTTTAGATTTCTGGGAAAGGAACTGGCACAGTGGTGTACCCCTTAAGATTAAGCGGCTTGCTCGAGATCCTAAACGATTCATTTGGGCTGTGAGTATAGCACAATCACGATGCATAAACATGCAAACAAGGATCGGAGCTTTAGTACAAGATGCAAATATGCTAATTCCTTATGCTGATATGCTGAATCATTCTTTCCGACCAAATTGTTTTTTCCACTGGCGTTTTAAGGATCGGATGCTTGAGGTGATGATAAATGCTGGGCAGCAGATCAAAAAAGGGCAAGAGATGACAGTCAATTACATGAATGGCCAAACGAACGACATGTTTCTGCAGAGATATGGTTTTTCATCGTCTGTGAACCCTTGGGATATGATCGAGTTCTCCGGGAATGCGCGTATTCACTTAGATTCGTTCTTATCAGTTTTCAACATAGCTGGGCTTCCTGATGGTTATTACTACAATGGTCGGTTATCGAACGAGGAAGATACATTCGTTGATGGAGCGGTAATCGCAGCAGCAAGATCTCTGCCTTCATGGTCAGATGGAGATATCCCACCTAGCCCAAGCAGGGAGAGGAAAGCAGTTAAAGAGTTACAAGAAGAATGCCAACGGATGCTCGCAGCATTCCCGACCACATCAGAACAAGACCAAAAAATCCTAGGTACGCCATGCAGTCCTTGCCTTCTCCCAAAATTCTATGCCACAAGCTACAAGAACGCTAGAAGCCTCGATCAAATACAGATTGCACCGAAAGTTGTTCATGGAGAAAGTGATCAAGGCATTGGATGTCTATCAAGAACGGATACTGTTCTAGTTCTGCAAATTTTCTACTGCAATTTGAGCTTAGCAGGTATTATATTGGGAAAACTTGAAGAGAGGATGGCTACGAATAGCCTGAAGGGTATGATTGCTGCAGCACTCAATAAGGGAGTAACAGAAGCAAGGGCAAGGATATTTGGTCACGTACTTAACCCGACAGGTCAACGATCTACCCACAAGCTTCTGCGCAAAAAACTCATCGGTGACAAAGTAGCAGAGTGGTATCCATATGACATCAAGAAGGATGATCCTCTTATCATGGCTCGTCAAGAACAAGAGCGCTTGTCGAAGCTTGAAATGCTGAAGCGGCGTGGTAAGGGACCACCTAAGAAGGGTCAAGGCAGGCGTGCAGCCAAGCGCAACAAGTAGAGACAATGACAGTGGAATTGTTCCTGCTAAGGCTTTATCTTTTTGTTGTTTTTTCCTGCCTAAAGTTTAGGTTATGGACCAGTTTCTCGTAGTTGTAACGACTTCTATTCATTATAAGCGATATTTACTCTGAAGATTCTTCGTTCATAATTGAGCGCCCTTGAAGCAAAGTAATACATACTATATTATGCAAAAAGCCAGAAACAGAGCAGCGCACCATGCGTAGTCTGGAAACAAAAGGCATTAATAGAACAGTATACTTGTATGTTGGAGAGAACCAACTGCTAGAATTCATTACTAGAGCTTTGTTTCGTGAACAATTCATTGACTGCAAATTGATTAGGAATGATAATTTGATTGCCTTGGAGCTGAAATGCGGTTCATTTTCCTCCCAAGATCAAAATCTAAGGTCCTGCACTGGGCGTGGTTTCTTCATTGATCTGCTTTTGGGTCATTAATTTGTCGTCTTGATGAGCCATATCATAGGTTGCATGAAGACCAAAGAAAACATAATAGATAAGCATCACCAGTGTGCAGATTCCAAATCTTTCAAAAGCCTCAGGACCCAATGATCCCATGAGAAAGACGTTGGTTGCAATCGACAAACTCGGCAGCCATGGCACGAGAGGTACGCCCCAAACTTTTGGCTTTCTTTGCATTGGCAGAAGCAATGAAATCCCCAACGTCCCTAGAAACCATATGGGAACGGTCACGACGTATCCTACCCAACCATTTGGGTAAAGCCCCCAGTATGCAGAAGTTGCCATGGAGGAAGCAATGATGGTTATCAGTAGAATGAAAAGCTTCAACTGGTGTGACCGTGGAGTGACCCCTCTTGCATAGTATCTCCTGACCAGAAGCGCCACGGCCATCATCATAAAGACGAACAGCGTGCTGACCGACAACAAGCTCGCCAGAACATCCAAGCTAGAGAAGAAAGCAACTGAACCACTTGCTACGGTTATCAACAGTGTAGCATTAATCGGAGTTCCAGTCTTTGGATGAACAAGAGCAAACCAAGGAGGAATCATGTGAGCTCGAGCAATGTGCGTTATATACCGACCTTGCCCGAGCGCCCCAACCAGAAGAACAGTAGTCATCCCCTTCAGAGCACCAAGAGCCACCAAATACTTAGCCCATTTCATTCCAACACTCTCAAAGGCAACAGAGTAGGCTGCATCTGGGTTGATATCAGTATACTTCTGCATCATACTCAGCGACAGAGCCATCAGACAGTATATCACAGTGATAACCGACATTGATCCCAACAATCCCAAAGGTATGAAGTTTTCCGCGTGCTGATCATCGCTATCGTTGCAGCGATCGTCAAGACCCCAACAGCAATTGGGTCAAGAAGATTGAACCCATCTTTCAGATTCGTGTGGATACGCAACGAATTGTCGGGTCTGTCCAGCAGCGAGGTTAAGTAAGAAGTCCAAGCTCGAGCGACAGCGGCGGTACCGACAATGCTCTCGAGGAGAATGTTGCCAGCAGTGATGAAAGCAGCAAAGTCCCCCAATTCAATCCTCAGGTAAGCAAAAGAGCCCCCTGCAACTGGGATTTCAACGGCGAACTCTGTATAGCAAAAAACAGAGAGCATTGCAGAAACACCGGAAGCTACATAGGACAAAACAATGGCTGGTCCAGCATGTTTATTGGCTTCTTGACCGGTAAGAACGAAGATCCCTGCACCAATTACAGCCCCAAATCCAAACCAGGTGAGATCCCACCAAGTTAAGCAGCGTTTCATTTCATTCTCACTTCGTTTTCTTAGCTCCCCGATTTCATTTTCGTCAAATGATCTGCTTTGAAGACGGTCCATGAACCGAAACCATGTCTGAGACAGAGCAGTCCGGTAATTGCTCAAGCTCTGGAAGGATTCTTCCGGCAAGAAATCTTGTTTGCTCCATCTCCACCAATAGCTTCTCTGCTGCTGAACAATATCGTCGCCCATTCTGCTCTCTATGGAAATGGGCATGTGACAACGTCGTCTATATAGAGTTTAGATCCGTGAGCAATGTGGGCACTGGCTAATGGTTAGGAGGGGGGGTTTCGAAGATGCCGATGGTGGGCTTGGATTGATGTTGCTTGTCTCGTAGCTCCAACCCGAAAATGACCGTCTTACAGAAATATCTGAATGCTCCCATTGACGTTAGGATCGAAGACTTCCAAGTCAACTACTTTGGCTGTGCTTGGTTGTTGCTCAATCTCATCAATTCTTTCATTGACTTTTATGCTTACTCTGTTTTCTGGTTTCTGTAGGATTATATAATCTTTTCCAAATATTCTCATGTTTACTGTGTAGCTGCTTGTCTTCCA

Coding sequence (CDS)

ATGGCGAATTCTATCTCCTTCCATCAGCCCACTCATCGCTTCATCTCCTGCCCGCAGGTGAAGGATTTCCGGTCTTTCTCCTCACCAAGATTCAGTAACTATCCGTCCACTTCCCCTAAAAGCAGATTGCGGCCGATTAAAGCTGCAACCGAAACCGCCGCATTTCCTCTTCTACAACCTCCGAAAGCCGACGAATCTTCTCCTTCTGAGTTGGAACCAGCAGACCCTGATTTCTATAAGATAGGATTTGTTAGAAGTATGCGAGCTTATGGAATCGAATTCAAAGAAGGGCCTGATGGGTTTGGTGTATATGCTTCCAAAGATGTTGAACCTCTTCGCCGTGCTAGGGTAATCATGGAAATTCCATTAGAACTAATGTTAACCATAAGCCAGAAACTCCCCTGGATGTTTTTCCCTGATATAATTCCAGTGGGTCATCCGATATTCGATATAATTAATTCGACAAATCCAGAGACTGATTGGGATCTAAGGTTAGCGTGTCTTCTGTTGTATGCATTTGATCGAGATGACAACTTTTGGCAGCTCTATGGTGATTTTCTACCAAGTATTGACGAATGTACAAGCTTACTTCTAGCCTCCGAGGAAGAACTTTTGGAGCTGCAGGATCAAAATCTTGCTTCATCGATCAGAGACCAGCAGCATCGTGCTTTAGATTTCTGGGAAAGGAACTGGCACAGTGGTGTACCCCTTAAGATTAAGCGGCTTGCTCGAGATCCTAAACGATTCATTTGGGCTGTGAGTATAGCACAATCACGATGCATAAACATGCAAACAAGGATCGGAGCTTTAGTACAAGATGCAAATATGCTAATTCCTTATGCTGATATGCTGAATCATTCTTTCCGACCAAATTGTTTTTTCCACTGGCGTTTTAAGGATCGGATGCTTGAGGTGATGATAAATGCTGGGCAGCAGATCAAAAAAGGGCAAGAGATGACAGTCAATTACATGAATGGCCAAACGAACGACATGTTTCTGCAGAGATATGGTTTTTCATCGTCTGTGAACCCTTGGGATATGATCGAGTTCTCCGGGAATGCGCGTATTCACTTAGATTCGTTCTTATCAGTTTTCAACATAGCTGGGCTTCCTGATGGTTATTACTACAATGGTCGGTTATCGAACGAGGAAGATACATTCGTTGATGGAGCGGTAATCGCAGCAGCAAGATCTCTGCCTTCATGGTCAGATGGAGATATCCCACCTAGCCCAAGCAGGGAGAGGAAAGCAGTTAAAGAGTTACAAGAAGAATGCCAACGGATGCTCGCAGCATTCCCGACCACATCAGAACAAGACCAAAAAATCCTAGGTACGCCATGCAGTCCTTGCCTTCTCCCAAAATTCTATGCCACAAGCTACAAGAACGCTAGAAGCCTCGATCAAATACAGATTGCACCGAAAGTTGTTCATGGAGAAAGTGATCAAGGCATTGGATGTCTATCAAGAACGGATACTGTTCTAGTTCTGCAAATTTTCTACTGCAATTTGAGCTTAGCAGGTATTATATTGGGAAAACTTGAAGAGAGGATGGCTACGAATAGCCTGAAGGGTATGATTGCTGCAGCACTCAATAAGGGAGTAACAGAAGCAAGGGCAAGGATATTTGGTCACGTACTTAACCCGACAGGTCAACGATCTACCCACAAGCTTCTGCGCAAAAAACTCATCGGTGACAAAGTAGCAGAGTGGTATCCATATGACATCAAGAAGGATGATCCTCTTATCATGGCTCGTCAAGAACAAGAGCGCTTGTCGAAGCTTGAAATGCTGAAGCGGCGTGGTAAGGGACCACCTAAGAAGGGTCAAGGCAGGCGTGCAGCCAAGCGCAACAAGTAG

Homology

[Close]

BLAST of CmoCh13G008670 vs. Swiss-Prot
Match: PTA14_ARATH (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 OS=Arabidopsis thaliana GN=PTAC14 PE=1 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 2.2e-188
Identity = 319/444 (71.85%), Postives = 379/444 (85.36%), Query Frame = 1


Query: 1   MANSISFHQPTHRFISCPQVKDFRSFSSPRFSNYPSTSPKSRLRPIKAAT-ETAAFPLLQ 60
           MA+S+S    T+ FIS PQ       S+PR  +      ++ +RPIK A+ ET  FPL Q
Sbjct: 1   MASSVSLQFLTNTFISKPQGFCNGIVSAPRPRSNLLRDRQNGVRPIKVASIETQPFPLFQ 60

Query: 61  PPKADESSPSELEPADPDFYKIGFVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIM 120
            P ++ESS SELE ADPDFYKIG+VRS+RAYG+EFKEGPDGFGVYASKD+EP RRARVIM
Sbjct: 61  SPASEESSSSELETADPDFYKIGYVRSVRAYGVEFKEGPDGFGVYASKDIEPRRRARVIM 120

Query: 121 EIPLELMLTISQKLPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDRDDNF 180
           EIPLELM+TI QK PWMFFPDI+P+GHPIFDIINST+PE DWD+RLACLLL++FDRDD+F
Sbjct: 121 EIPLELMITIRQKHPWMFFPDIVPIGHPIFDIINSTDPEIDWDIRLACLLLFSFDRDDHF 180

Query: 181 WQLYGDFLPSIDECTSLLLASEEELLELQDQNLASSIRDQQHRALDFWERNWHSGVPLKI 240
           W+LYGDFLP+ DEC+SLLLA+EE+L ELQD +L S+IR QQ R LDFWE+NWHSGVPLKI
Sbjct: 181 WRLYGDFLPAADECSSLLLATEEDLAELQDPDLVSTIRQQQKRILDFWEKNWHSGVPLKI 240

Query: 241 KRLARDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFK 300
           KRLA DP+RFIWAVS+AQ+RCI+MQTR+GALVQ+ NM+IPYADMLNHSF PNCF HWR K
Sbjct: 241 KRLAEDPERFIWAVSMAQTRCISMQTRVGALVQELNMMIPYADMLNHSFEPNCFLHWRPK 300

Query: 301 DRMLEVMINAGQQIKKGQEMTVNYMNGQTNDMFLQRYGFSSSVNPWDMIEFSGNARIHLD 360
           DRMLEVM NAGQ IKKG+EMT+NYM GQ N+M ++RYGFS+ VNPWD I+FSG++RIHL+
Sbjct: 301 DRMLEVMSNAGQDIKKGEEMTINYMPGQKNNMLMERYGFSTPVNPWDAIKFSGDSRIHLN 360

Query: 361 SFLSVFNIAGLPDGYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVK 420
           SFLSVFNI GLP+ YY++  LS   DTFVDGAVIAAAR+LP+WSD D+PP PS ERKAVK
Sbjct: 361 SFLSVFNIYGLPEEYYHDSELS-RGDTFVDGAVIAAARTLPTWSDIDLPPIPSAERKAVK 420

Query: 421 ELQEECQRMLAAFPTTSEQDQKIL 444
           ELQ+EC++MLA +PTT+EQDQK+L
Sbjct: 421 ELQDECRKMLAEYPTTAEQDQKLL 443

[Close]

BLAST of CmoCh13G008670 vs. Swiss-Prot
Match: RBCMT_ARATH ([Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic OS=Arabidopsis thaliana GN=LSMT-L PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.8e-09
Identity = 85/374 (22.73%), Postives = 159/374 (42.51%), Query Frame = 1


Query: 98  PDGFGVYASKDVEPLRRARVIMEIPLELMLTISQKLPWMFFPDIIPVGHPIFDIINSTNP 157
           P+G G+ A +D+    R  V++EIP  L +           P+ +     I  +     P
Sbjct: 74  PEGLGLVARRDIG---RNEVVLEIPKRLWIN----------PETVTASK-IGPLCGGLKP 133

Query: 158 ETDWDLRLACLLLYAFDRDDNFWQLYGDFLPSIDECTSLLLASEEELLELQD-QNLASSI 217
              W + +A  L+     +++ W++Y D LP   + T  +  SEEEL EL+  Q L++++
Sbjct: 134 ---W-VSVALFLIREKYEEESSWRVYLDMLPQSTDST--VFWSEEELAELKGTQLLSTTL 193

Query: 218 RDQQHRALDFWERNWHSGVPLK---IKRLARDPKRFIWAVSIAQSRCINMQTRIGALVQD 277
             +++   +F +      +P K     R+  D   FIWA  I +SR  +       L   
Sbjct: 194 GVKEYVENEFLKLEQEILLPNKDLFSSRITLDD--FIWAFGILKSRAFSR------LRGQ 253

Query: 278 ANMLIPYADMLNHSFRPNCF-FHWRFK-----DRMLEVMINAGQQIKKGQEMTVNYMNGQ 337
             +LIP AD++NH+       + +  K      R L   + +   +K G+++ + Y   +
Sbjct: 254 NLVLIPLADLINHNPAIKTEDYAYEIKGAGLFSRDLLFSLKSPVYVKAGEQVYIQYDLNK 313

Query: 338 TNDMFLQRYGFSSSVNP------------------WDMIEFSGNARIHLDSFLSVFNIAG 397
           +N      YGF  S NP                   D ++ + + ++    +  + +   
Sbjct: 314 SNAELALDYGFVES-NPKRNSYTLTIEIPESDPFFGDKLDIAESNKMGETGYFDIVDGQT 373

Query: 398 LPDGYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRML 444
           LP G     RL        D  ++ +  +   W   ++P S + E    + +++ C+  L
Sbjct: 374 LPAGMLQYLRLVALGGP--DAFLLESIFNNTIWGHLELPVSRTNEELICRVVRDACKSAL 416

[Close]

BLAST of CmoCh13G008670 vs. TrEMBL
Match: A0A0A0LTZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051910 PE=4 SV=1)

HSP 1 Score: 846.3 bits (2185), Expect = 2.4e-242
Identity = 412/443 (93.00%), Postives = 429/443 (96.84%), Query Frame = 1


Query: 1   MANSISFHQPTHRFISCPQVKDFRSFSSPRFSNYPSTSPKSRLRPIKAATETAAFPLLQP 60
           MANSISFHQPTHRFISCPQVKDFRSF SPRF+N  S SPK+RLRPIKAAT   AFPLLQP
Sbjct: 1   MANSISFHQPTHRFISCPQVKDFRSFPSPRFTNNSSISPKARLRPIKAATGIPAFPLLQP 60

Query: 61  PKADESSPSELEPADPDFYKIGFVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIME 120
           PKADES PSELEPADPDFYKIG+VRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIME
Sbjct: 61  PKADES-PSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIME 120

Query: 121 IPLELMLTISQKLPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDRDDNFW 180
           IPLELMLTISQKLPWMFFPDIIP+GHPIFDIINSTNPETDWDLRLACLLLYAFDRDDNFW
Sbjct: 121 IPLELMLTISQKLPWMFFPDIIPLGHPIFDIINSTNPETDWDLRLACLLLYAFDRDDNFW 180

Query: 181 QLYGDFLPSIDECTSLLLASEEELLELQDQNLASSIRDQQHRALDFWERNWHSGVPLKIK 240
           QLYGDFLPSIDECTSLLLASEEELLELQDQNLAS+IRDQQ RAL+FWERNWHSGVPLKIK
Sbjct: 181 QLYGDFLPSIDECTSLLLASEEELLELQDQNLASTIRDQQRRALEFWERNWHSGVPLKIK 240

Query: 241 RLARDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFKD 300
           RLARDPKRFIWA+SIAQSRCINM+TRIGALVQ+ANMLIPYADMLNHSF+PNCFFHWRFKD
Sbjct: 241 RLARDPKRFIWALSIAQSRCINMETRIGALVQNANMLIPYADMLNHSFQPNCFFHWRFKD 300

Query: 301 RMLEVMINAGQQIKKGQEMTVNYMNGQTNDMFLQRYGFSSSVNPWDMIEFSGNARIHLDS 360
           RMLEVMINAGQQIKKGQEMTVNYMNGQ N+MFLQRYGFSS VNPWDMIEFS NA IHLDS
Sbjct: 301 RMLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIEFSSNACIHLDS 360

Query: 361 FLSVFNIAGLPDGYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKE 420
           FLSVFNIAGLP+ YYYNGRLS++EDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKE
Sbjct: 361 FLSVFNIAGLPENYYYNGRLSSKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKE 420

Query: 421 LQEECQRMLAAFPTTSEQDQKIL 444
           LQEECQRMLAAFPTTS++DQK+L
Sbjct: 421 LQEECQRMLAAFPTTSDKDQKML 442

[Close]

BLAST of CmoCh13G008670 vs. TrEMBL
Match: D7T9R5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g01080 PE=4 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 6.8e-205
Identity = 349/444 (78.60%), Postives = 391/444 (88.06%), Query Frame = 1


Query: 1   MANSISFHQPTHRFISCPQ-VKDFRSFSSPRFSNYPSTSPKSRLRPIKAATETAAFPLLQ 60
           MA+S   H PTH FIS  Q   +  S S P +S    +   + +RPIKAA E   FPL +
Sbjct: 1   MASSPLLHHPTHCFISSNQGFCNGLSSSRPNYSWMRGSG--NNIRPIKAAVEMPPFPLFE 60

Query: 61  PPKADESSPSELEPADPDFYKIGFVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIM 120
           PP+ +  +PS+LEPADPDFYKIG+VRS+RAYG+EFKEGPDGFGVYASKDVEPLRRAR+IM
Sbjct: 61  PPQIESDTPSQLEPADPDFYKIGYVRSVRAYGVEFKEGPDGFGVYASKDVEPLRRARMIM 120

Query: 121 EIPLELMLTISQKLPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDRDDNF 180
           EIPLELMLTI +KLPWMFFPDI+PVGHPIFDIINSTNPETDWDLRLACLLL+AFD++DNF
Sbjct: 121 EIPLELMLTIRKKLPWMFFPDIVPVGHPIFDIINSTNPETDWDLRLACLLLFAFDQEDNF 180

Query: 181 WQLYGDFLPSIDECTSLLLASEEELLELQDQNLASSIRDQQHRALDFWERNWHSGVPLKI 240
           WQLYGDFLPS  ECTSLLLA EE+LLELQD  LAS++RDQQ RA +FWE+NWHSGVPLKI
Sbjct: 181 WQLYGDFLPSEGECTSLLLAKEEDLLELQDPKLASTMRDQQRRASEFWEKNWHSGVPLKI 240

Query: 241 KRLARDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFK 300
           KRLARDP RFIWAVSIAQSRCINMQ RIGALVQDANMLIPYADMLNHSF+PNCFFHWRFK
Sbjct: 241 KRLARDPNRFIWAVSIAQSRCINMQMRIGALVQDANMLIPYADMLNHSFQPNCFFHWRFK 300

Query: 301 DRMLEVMINAGQQIKKGQEMTVNYMNGQTNDMFLQRYGFSSSVNPWDMIEFSGNARIHLD 360
           DRMLEVMINAGQ+IKKG+EMTVNYM+G  NDM +QRYGFSS VNPWD+I+FSGNA+IHLD
Sbjct: 301 DRMLEVMINAGQRIKKGEEMTVNYMSGLKNDMLMQRYGFSSPVNPWDVIQFSGNAQIHLD 360

Query: 361 SFLSVFNIAGLPDGYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVK 420
           SFLSVFNI+GLP+ YY+N RLSN  D+FVDGAVIAAAR+LP+WSDGD+PP PS ERKAVK
Sbjct: 361 SFLSVFNISGLPEEYYHNSRLSNNGDSFVDGAVIAAARTLPTWSDGDVPPMPSMERKAVK 420

Query: 421 ELQEECQRMLAAFPTTSEQDQKIL 444
           +LQEECQ+ML  FPTTSEQDQKIL
Sbjct: 421 QLQEECQQMLLEFPTTSEQDQKIL 442

[Close]

BLAST of CmoCh13G008670 vs. TrEMBL
Match: A0A067LF45_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26668 PE=4 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 4.9e-203
Identity = 347/456 (76.10%), Postives = 399/456 (87.50%), Query Frame = 1


Query: 1   MANSISFHQPTHRFISCPQVKDFRSFSSPRFSNYP----------STSPKSRLRPIKAAT 60
           MA+S++FH  TH F +           SPR+S  P          S++  + +RPIKA++
Sbjct: 1   MASSVAFHPLTHCFFTS---------QSPRWSARPACPLTRNRENSSNNNNTVRPIKASS 60

Query: 61  -ETAAFPLLQPPKADESSPSELEPADPDFYKIGFVRSMRAYGIEFKEGPDGFGVYASKDV 120
            E   FPL QPP  +ESS SELEPADPDFYKIG+VRSMRAYG+EFKEGPDGFGVYASKDV
Sbjct: 61  LEIPPFPLFQPPVVEESS-SELEPADPDFYKIGYVRSMRAYGVEFKEGPDGFGVYASKDV 120

Query: 121 EPLRRARVIMEIPLELMLTISQKLPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLL 180
           +PLRRAR+IMEIP+ELMLTIS+KLPWMFFPDIIPVGHPIFDIINST+PETDWDLRLA LL
Sbjct: 121 QPLRRARMIMEIPIELMLTISKKLPWMFFPDIIPVGHPIFDIINSTDPETDWDLRLASLL 180

Query: 181 LYAFDRDDNFWQLYGDFLPSIDECTSLLLASEEELLELQDQNLASSIRDQQHRALDFWER 240
           L++FD  D+FWQLYGDFLPS+DECTSLLLA+EE+LLELQDQNLAS+++ QQ RAL+FWE+
Sbjct: 181 LFSFDCKDSFWQLYGDFLPSVDECTSLLLATEEDLLELQDQNLASTMKKQQQRALEFWEK 240

Query: 241 NWHSGVPLKIKRLARDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFR 300
           NWHSGVPLKIKRLARDP+RFIWAV +AQSRCINMQ RIGALVQDANML+PYADMLNHSF 
Sbjct: 241 NWHSGVPLKIKRLARDPERFIWAVGMAQSRCINMQMRIGALVQDANMLVPYADMLNHSFE 300

Query: 301 PNCFFHWRFKDRMLEVMINAGQQIKKGQEMTVNYMNGQTNDMFLQRYGFSSSVNPWDMIE 360
           PNCFFHWRFKDRMLEVMINAGQQIKKG+EMTVNYMNG  ND F+QRYGFSSSVNPWD+I+
Sbjct: 301 PNCFFHWRFKDRMLEVMINAGQQIKKGEEMTVNYMNGHKNDKFMQRYGFSSSVNPWDVIQ 360

Query: 361 FSGNARIHLDSFLSVFNIAGLPDGYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPP 420
           FSGN RIHLDSFLSVFNI+GLP+ Y++N +L++  DTFVDGA+IAAAR+LP+WSDGD+PP
Sbjct: 361 FSGNTRIHLDSFLSVFNISGLPEEYHHNSQLTSNADTFVDGAIIAAARTLPTWSDGDVPP 420

Query: 421 SPSRERKAVKELQEECQRMLAAFPTTSEQDQKILGT 446
            PSRERKAVKELQEECQ+ML+ FPTTSE+DQK+L T
Sbjct: 421 LPSRERKAVKELQEECQQMLSEFPTTSEEDQKLLDT 446

[Close]

BLAST of CmoCh13G008670 vs. TrEMBL
Match: B9SQ68_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1195930 PE=4 SV=1)

HSP 1 Score: 714.5 bits (1843), Expect = 1.1e-202
Identity = 346/446 (77.58%), Postives = 399/446 (89.46%), Query Frame = 1


Query: 2   ANSISFHQPTH-RFISCPQVKDFRSFSSPRFSNYPSTSPKSRLRPIKAAT-ETAAFPLLQ 61
           A+S++ H  TH  FIS  Q K+    + P+++   S +  + +RPIKA++ E   FPL Q
Sbjct: 3   ASSVALHHLTHCSFISLQQYKEGLITARPKYTF--SRNSDNVVRPIKASSVEAPPFPLFQ 62

Query: 62  PPKADESSPSELEPADPDFYKIGFVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIM 121
            PK +ESS SELEPADPDFYKIG+VRSMRAYG+EFKEGPDGFGVYASKD+EPLRRAR+IM
Sbjct: 63  SPKTEESS-SELEPADPDFYKIGYVRSMRAYGVEFKEGPDGFGVYASKDIEPLRRARMIM 122

Query: 122 EIPLELMLTISQKLPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDRDDNF 181
           EIP+ELMLTIS+KLPWMFFPDIIPVGHPIFDIINST+PETDWDLRLACLLL++FD  DNF
Sbjct: 123 EIPIELMLTISKKLPWMFFPDIIPVGHPIFDIINSTDPETDWDLRLACLLLFSFDCKDNF 182

Query: 182 WQLYGDFLPSIDECTSLLLASEEELLELQDQNLASSIRDQQHRALDFWERNWHSGVPLKI 241
           WQLYGDFLPS DECTSLLLA+EE+LLELQDQNLAS +R QQHRAL+FWE+NWHSGVPLKI
Sbjct: 183 WQLYGDFLPSEDECTSLLLATEEDLLELQDQNLASIMRKQQHRALEFWEKNWHSGVPLKI 242

Query: 242 KRLARDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFK 301
           KRLAR+P+RFIWAVS+AQSRCINMQ R+GALVQDANMLIPYADMLNHSF+PNCFFHWRFK
Sbjct: 243 KRLAREPERFIWAVSMAQSRCINMQMRVGALVQDANMLIPYADMLNHSFQPNCFFHWRFK 302

Query: 302 DRMLEVMINAGQQIKKGQEMTVNYMNGQTNDMFLQRYGFSSSVNPWDMIEFSGNARIHLD 361
           DRMLEVMINAGQQIKKG++MTVNYM+GQ ND+F+QRYGFSSSVNPWD+I+FSGNA IHLD
Sbjct: 303 DRMLEVMINAGQQIKKGEQMTVNYMSGQKNDLFMQRYGFSSSVNPWDVIQFSGNACIHLD 362

Query: 362 SFLSVFNIAGLPDGYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVK 421
           SFLS FNI+GLP+ YY+N +L++  DTFVDGAVIAAAR+LP+W+DGD+PP PS ERKA K
Sbjct: 363 SFLSAFNISGLPEEYYHNNQLTSTPDTFVDGAVIAAARTLPTWTDGDVPPLPSIERKAAK 422

Query: 422 ELQEECQRMLAAFPTTSEQDQKILGT 446
           ELQEECQ+MLA FPTTSE+DQ +L T
Sbjct: 423 ELQEECQQMLAEFPTTSEEDQTLLDT 445

[Close]

BLAST of CmoCh13G008670 vs. TrEMBL
Match: M5WHC5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004855mg PE=4 SV=1)

HSP 1 Score: 710.3 bits (1832), Expect = 2.1e-201
Identity = 347/447 (77.63%), Postives = 394/447 (88.14%), Query Frame = 1


Query: 2   ANSISFHQPTHRFISCPQVK--DFRSFSSPRFSNYPSTSPKS-RLRPIKA--ATETAAFP 61
           ++S+  H P+H  IS  Q+K  ++     PR++     + K  R++PIKA  ATE   F 
Sbjct: 3   SSSLPLHHPSHCLISNRQLKGSNYGWSPLPRYTVPTKDAVKGIRIQPIKAKAATEAPPFS 62

Query: 62  LLQPPKADESSPSELEPADPDFYKIGFVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRAR 121
           L QPP+A E S SELEPADPDFYKIG+VRSMRAYGIEFKEGPDGFGVYASKDVEPLRRAR
Sbjct: 63  LFQPPEA-EGSASELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRAR 122

Query: 122 VIMEIPLELMLTISQKLPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDRD 181
           VIMEIPLELMLT+SQKLPWMFFPDI+PVGHPIFDIINST+PETDWDLRLACLLLYAFDR+
Sbjct: 123 VIMEIPLELMLTVSQKLPWMFFPDIVPVGHPIFDIINSTDPETDWDLRLACLLLYAFDRE 182

Query: 182 DNFWQLYGDFLPSIDECTSLLLASEEELLELQDQNLASSIRDQQHRALDFWERNWHSGVP 241
           DNFWQLYGDFLPS DEC SLLLASEEEL ELQ+ NLAS++R+QQ RAL FWE+NWHSGVP
Sbjct: 183 DNFWQLYGDFLPSADECPSLLLASEEELSELQNPNLASTMREQQRRALKFWEKNWHSGVP 242

Query: 242 LKIKRLARDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHW 301
           LKIKRLARDP+RFIWA+S+AQSRCI MQ RIGALVQDANMLIPYADMLNHSF PNCFFHW
Sbjct: 243 LKIKRLARDPERFIWALSMAQSRCIGMQMRIGALVQDANMLIPYADMLNHSFEPNCFFHW 302

Query: 302 RFKDRMLEVMINAGQQIKKGQEMTVNYMNGQTNDMFLQRYGFSSSVNPWDMIEFSGNARI 361
           RFKDRMLEVMINAG++IKKG EMTVNYM+GQ ND+ +QRYGFSS VNPWD+I+FSGNARI
Sbjct: 303 RFKDRMLEVMINAGKRIKKGDEMTVNYMSGQQNDLLMQRYGFSSPVNPWDVIQFSGNARI 362

Query: 362 HLDSFLSVFNIAGLPDGYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERK 421
           HLDSFLSVFNI+GLP+ YY+N RLSN+ DTFVDGA+IAAAR+L +WSDGD+PP PS ER+
Sbjct: 363 HLDSFLSVFNISGLPEEYYHNSRLSNDGDTFVDGAIIAAARTLSTWSDGDVPPIPSMERR 422

Query: 422 AVKELQEECQRMLAAFPTTSEQDQKIL 444
           +VKELQEEC++MLA +PT S+QDQKIL
Sbjct: 423 SVKELQEECRQMLAVYPTNSKQDQKIL 448

[Close]

BLAST of CmoCh13G008670 vs. TAIR10
Match: AT4G20130.1 (AT4G20130.1 plastid transcriptionally active 14)

HSP 1 Score: 660.2 bits (1702), Expect = 1.2e-189
Identity = 319/444 (71.85%), Postives = 379/444 (85.36%), Query Frame = 1


Query: 1   MANSISFHQPTHRFISCPQVKDFRSFSSPRFSNYPSTSPKSRLRPIKAAT-ETAAFPLLQ 60
           MA+S+S    T+ FIS PQ       S+PR  +      ++ +RPIK A+ ET  FPL Q
Sbjct: 1   MASSVSLQFLTNTFISKPQGFCNGIVSAPRPRSNLLRDRQNGVRPIKVASIETQPFPLFQ 60

Query: 61  PPKADESSPSELEPADPDFYKIGFVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIM 120
            P ++ESS SELE ADPDFYKIG+VRS+RAYG+EFKEGPDGFGVYASKD+EP RRARVIM
Sbjct: 61  SPASEESSSSELETADPDFYKIGYVRSVRAYGVEFKEGPDGFGVYASKDIEPRRRARVIM 120

Query: 121 EIPLELMLTISQKLPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDRDDNF 180
           EIPLELM+TI QK PWMFFPDI+P+GHPIFDIINST+PE DWD+RLACLLL++FDRDD+F
Sbjct: 121 EIPLELMITIRQKHPWMFFPDIVPIGHPIFDIINSTDPEIDWDIRLACLLLFSFDRDDHF 180

Query: 181 WQLYGDFLPSIDECTSLLLASEEELLELQDQNLASSIRDQQHRALDFWERNWHSGVPLKI 240
           W+LYGDFLP+ DEC+SLLLA+EE+L ELQD +L S+IR QQ R LDFWE+NWHSGVPLKI
Sbjct: 181 WRLYGDFLPAADECSSLLLATEEDLAELQDPDLVSTIRQQQKRILDFWEKNWHSGVPLKI 240

Query: 241 KRLARDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFK 300
           KRLA DP+RFIWAVS+AQ+RCI+MQTR+GALVQ+ NM+IPYADMLNHSF PNCF HWR K
Sbjct: 241 KRLAEDPERFIWAVSMAQTRCISMQTRVGALVQELNMMIPYADMLNHSFEPNCFLHWRPK 300

Query: 301 DRMLEVMINAGQQIKKGQEMTVNYMNGQTNDMFLQRYGFSSSVNPWDMIEFSGNARIHLD 360
           DRMLEVM NAGQ IKKG+EMT+NYM GQ N+M ++RYGFS+ VNPWD I+FSG++RIHL+
Sbjct: 301 DRMLEVMSNAGQDIKKGEEMTINYMPGQKNNMLMERYGFSTPVNPWDAIKFSGDSRIHLN 360

Query: 361 SFLSVFNIAGLPDGYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVK 420
           SFLSVFNI GLP+ YY++  LS   DTFVDGAVIAAAR+LP+WSD D+PP PS ERKAVK
Sbjct: 361 SFLSVFNIYGLPEEYYHDSELS-RGDTFVDGAVIAAARTLPTWSDIDLPPIPSAERKAVK 420

Query: 421 ELQEECQRMLAAFPTTSEQDQKIL 444
           ELQ+EC++MLA +PTT+EQDQK+L
Sbjct: 421 ELQDECRKMLAEYPTTAEQDQKLL 443

[Close]

BLAST of CmoCh13G008670 vs. TAIR10
Match: AT5G44710.1 (AT5G44710.1 Ribosomal protein S27/S33, mitochondrial (InterPro:IPR013219))

HSP 1 Score: 163.3 bits (412), Expect = 4.7e-40
Identity = 79/102 (77.45%), Postives = 94/102 (92.16%), Query Frame = 1


Query: 517 MATNSLKGMIAAALNKGVTEARARIFGHVLNPTGQRSTHKLLRKKLIGDKVAEWYPYDIK 576
           MA+ SLK +I++A+ +GVTEARARIFGH+LNPTGQRS HK+LRKKLIGDKVAEWYPYDIK
Sbjct: 1   MASGSLKSLISSAVGRGVTEARARIFGHMLNPTGQRSPHKILRKKLIGDKVAEWYPYDIK 60

Query: 577 KDDPLIMARQEQERLSKLEMLKRRGKGPPKKGQGRRAAKRNK 619
            +DP ++AR+E+ER+SKLEMLKRR KGPPKKG G+RAAKRNK
Sbjct: 61  NEDPNVLAREEKERISKLEMLKRRDKGPPKKGHGKRAAKRNK 102

[Close]

BLAST of CmoCh13G008670 vs. TAIR10
Match: AT1G14030.1 (AT1G14030.1 Rubisco methyltransferase family protein)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-10
Identity = 85/374 (22.73%), Postives = 159/374 (42.51%), Query Frame = 1


Query: 98  PDGFGVYASKDVEPLRRARVIMEIPLELMLTISQKLPWMFFPDIIPVGHPIFDIINSTNP 157
           P+G G+ A +D+    R  V++EIP  L +           P+ +     I  +     P
Sbjct: 74  PEGLGLVARRDIG---RNEVVLEIPKRLWIN----------PETVTASK-IGPLCGGLKP 133

Query: 158 ETDWDLRLACLLLYAFDRDDNFWQLYGDFLPSIDECTSLLLASEEELLELQD-QNLASSI 217
              W + +A  L+     +++ W++Y D LP   + T  +  SEEEL EL+  Q L++++
Sbjct: 134 ---W-VSVALFLIREKYEEESSWRVYLDMLPQSTDST--VFWSEEELAELKGTQLLSTTL 193

Query: 218 RDQQHRALDFWERNWHSGVPLK---IKRLARDPKRFIWAVSIAQSRCINMQTRIGALVQD 277
             +++   +F +      +P K     R+  D   FIWA  I +SR  +       L   
Sbjct: 194 GVKEYVENEFLKLEQEILLPNKDLFSSRITLDD--FIWAFGILKSRAFSR------LRGQ 253

Query: 278 ANMLIPYADMLNHSFRPNCF-FHWRFK-----DRMLEVMINAGQQIKKGQEMTVNYMNGQ 337
             +LIP AD++NH+       + +  K      R L   + +   +K G+++ + Y   +
Sbjct: 254 NLVLIPLADLINHNPAIKTEDYAYEIKGAGLFSRDLLFSLKSPVYVKAGEQVYIQYDLNK 313

Query: 338 TNDMFLQRYGFSSSVNP------------------WDMIEFSGNARIHLDSFLSVFNIAG 397
           +N      YGF  S NP                   D ++ + + ++    +  + +   
Sbjct: 314 SNAELALDYGFVES-NPKRNSYTLTIEIPESDPFFGDKLDIAESNKMGETGYFDIVDGQT 373

Query: 398 LPDGYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRML 444
           LP G     RL        D  ++ +  +   W   ++P S + E    + +++ C+  L
Sbjct: 374 LPAGMLQYLRLVALGGP--DAFLLESIFNNTIWGHLELPVSRTNEELICRVVRDACKSAL 416

[Close]

BLAST of CmoCh13G008670 vs. NCBI nr
Match: gi|449474044|ref|XP_004154058.1| (PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 846.3 bits (2185), Expect = 3.4e-242
Identity = 412/443 (93.00%), Postives = 429/443 (96.84%), Query Frame = 1


Query: 1   MANSISFHQPTHRFISCPQVKDFRSFSSPRFSNYPSTSPKSRLRPIKAATETAAFPLLQP 60
           MANSISFHQPTHRFISCPQVKDFRSF SPRF+N  S SPK+RLRPIKAAT   AFPLLQP
Sbjct: 1   MANSISFHQPTHRFISCPQVKDFRSFPSPRFTNNSSISPKARLRPIKAATGIPAFPLLQP 60

Query: 61  PKADESSPSELEPADPDFYKIGFVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIME 120
           PKADES PSELEPADPDFYKIG+VRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIME
Sbjct: 61  PKADES-PSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIME 120

Query: 121 IPLELMLTISQKLPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDRDDNFW 180
           IPLELMLTISQKLPWMFFPDIIP+GHPIFDIINSTNPETDWDLRLACLLLYAFDRDDNFW
Sbjct: 121 IPLELMLTISQKLPWMFFPDIIPLGHPIFDIINSTNPETDWDLRLACLLLYAFDRDDNFW 180

Query: 181 QLYGDFLPSIDECTSLLLASEEELLELQDQNLASSIRDQQHRALDFWERNWHSGVPLKIK 240
           QLYGDFLPSIDECTSLLLASEEELLELQDQNLAS+IRDQQ RAL+FWERNWHSGVPLKIK
Sbjct: 181 QLYGDFLPSIDECTSLLLASEEELLELQDQNLASTIRDQQRRALEFWERNWHSGVPLKIK 240

Query: 241 RLARDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFKD 300
           RLARDPKRFIWA+SIAQSRCINM+TRIGALVQ+ANMLIPYADMLNHSF+PNCFFHWRFKD
Sbjct: 241 RLARDPKRFIWALSIAQSRCINMETRIGALVQNANMLIPYADMLNHSFQPNCFFHWRFKD 300

Query: 301 RMLEVMINAGQQIKKGQEMTVNYMNGQTNDMFLQRYGFSSSVNPWDMIEFSGNARIHLDS 360
           RMLEVMINAGQQIKKGQEMTVNYMNGQ N+MFLQRYGFSS VNPWDMIEFS NA IHLDS
Sbjct: 301 RMLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIEFSSNACIHLDS 360

Query: 361 FLSVFNIAGLPDGYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKE 420
           FLSVFNIAGLP+ YYYNGRLS++EDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKE
Sbjct: 361 FLSVFNIAGLPENYYYNGRLSSKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKE 420

Query: 421 LQEECQRMLAAFPTTSEQDQKIL 444
           LQEECQRMLAAFPTTS++DQK+L
Sbjct: 421 LQEECQRMLAAFPTTSDKDQKML 442

[Close]

BLAST of CmoCh13G008670 vs. NCBI nr
Match: gi|778658245|ref|XP_011652361.1| (PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 840.9 bits (2171), Expect = 1.4e-240
Identity = 412/446 (92.38%), Postives = 429/446 (96.19%), Query Frame = 1


Query: 1   MANSISFHQPTHRFISCPQVKDFRSFSSPRFSNYPSTSPKSRLRPIKAATETAAFPLLQP 60
           MANSISFHQPTHRFISCPQVKDFRSF SPRF+N  S SPK+RLRPIKAAT   AFPLLQP
Sbjct: 1   MANSISFHQPTHRFISCPQVKDFRSFPSPRFTNNSSISPKARLRPIKAATGIPAFPLLQP 60

Query: 61  PKADESSPSELEPADPDFYKIGFVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIME 120
           PKADES PSELEPADPDFYKIG+VRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIME
Sbjct: 61  PKADES-PSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIME 120

Query: 121 IPLELMLTISQKLPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDRDDNFW 180
           IPLELMLTISQKLPWMFFPDIIP+GHPIFDIINSTNPETDWDLRLACLLLYAFDRDDNFW
Sbjct: 121 IPLELMLTISQKLPWMFFPDIIPLGHPIFDIINSTNPETDWDLRLACLLLYAFDRDDNFW 180

Query: 181 QLYGDFLPSIDECTSLLLASEEELLELQDQNLASSIRDQQHRALDFWERNWHSGVPLKIK 240
           QLYGDFLPSIDECTSLLLASEEELLELQDQNLAS+IRDQQ RAL+FWERNWHSGVPLKIK
Sbjct: 181 QLYGDFLPSIDECTSLLLASEEELLELQDQNLASTIRDQQRRALEFWERNWHSGVPLKIK 240

Query: 241 RLARDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFKD 300
           RLARDPKRFIWA+SIAQSRCINM+TRIGALVQ+ANMLIPYADMLNHSF+PNCFFHWRFKD
Sbjct: 241 RLARDPKRFIWALSIAQSRCINMETRIGALVQNANMLIPYADMLNHSFQPNCFFHWRFKD 300

Query: 301 RMLEVMINAGQQIKKGQEMTVNYMNGQTNDMFLQRYGFSSSVNPWDMIEFSGNARIHLDS 360
           RMLEVMINAGQQIKKGQEMTVNYMNGQ N+MFLQRYGFSS VNPWDMIEFS NA IHLDS
Sbjct: 301 RMLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIEFSSNACIHLDS 360

Query: 361 FLSVFNIAGLPDGYYYN---GRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKA 420
           FLSVFNIAGLP+ YYYN   GRLS++EDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKA
Sbjct: 361 FLSVFNIAGLPENYYYNAIAGRLSSKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKA 420

Query: 421 VKELQEECQRMLAAFPTTSEQDQKIL 444
           VKELQEECQRMLAAFPTTS++DQK+L
Sbjct: 421 VKELQEECQRMLAAFPTTSDKDQKML 445

[Close]

BLAST of CmoCh13G008670 vs. NCBI nr
Match: gi|659067598|ref|XP_008440293.1| (PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 840.1 bits (2169), Expect = 2.5e-240
Identity = 409/443 (92.33%), Postives = 426/443 (96.16%), Query Frame = 1


Query: 1   MANSISFHQPTHRFISCPQVKDFRSFSSPRFSNYPSTSPKSRLRPIKAATETAAFPLLQP 60
           MANSISFH PTHRFISCPQVKDFRSF SPRF+   STSPK+RLRPIKAAT   AFPLLQP
Sbjct: 1   MANSISFHHPTHRFISCPQVKDFRSFPSPRFTYNSSTSPKTRLRPIKAATGLPAFPLLQP 60

Query: 61  PKADESSPSELEPADPDFYKIGFVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIME 120
           PKADES PSELEPADPDFYKIG+VRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIME
Sbjct: 61  PKADES-PSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIME 120

Query: 121 IPLELMLTISQKLPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDRDDNFW 180
           IPLE+MLTISQKLPWMFFPDIIPVGHPIFDIINST+PETDWDLRLACLLLYAFDR+DNFW
Sbjct: 121 IPLEIMLTISQKLPWMFFPDIIPVGHPIFDIINSTDPETDWDLRLACLLLYAFDREDNFW 180

Query: 181 QLYGDFLPSIDECTSLLLASEEELLELQDQNLASSIRDQQHRALDFWERNWHSGVPLKIK 240
           QLYGDFLPSIDECTSLLLASEEEL ELQDQNLAS+IRDQQ RAL+FWERNWHSGVPLKIK
Sbjct: 181 QLYGDFLPSIDECTSLLLASEEELSELQDQNLASTIRDQQRRALEFWERNWHSGVPLKIK 240

Query: 241 RLARDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFKD 300
           RLARDPKRFIWAVSIAQSRCINM+TRIGALVQ+ANMLIPYADM+NHSF PNCFFHWRFKD
Sbjct: 241 RLARDPKRFIWAVSIAQSRCINMETRIGALVQNANMLIPYADMMNHSFEPNCFFHWRFKD 300

Query: 301 RMLEVMINAGQQIKKGQEMTVNYMNGQTNDMFLQRYGFSSSVNPWDMIEFSGNARIHLDS 360
           RMLEVMINAGQQIKKGQEMTVNYMNGQ N+MFLQRYGFSS VNPWDMI+FSGNA IHLDS
Sbjct: 301 RMLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSGNACIHLDS 360

Query: 361 FLSVFNIAGLPDGYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKE 420
           FLSVFNIAGLP+ YYYNGRLS +EDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKE
Sbjct: 361 FLSVFNIAGLPENYYYNGRLSKKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKE 420

Query: 421 LQEECQRMLAAFPTTSEQDQKIL 444
           LQEECQRMLAAFPTTSE+DQK+L
Sbjct: 421 LQEECQRMLAAFPTTSEKDQKLL 442

[Close]

BLAST of CmoCh13G008670 vs. NCBI nr
Match: gi|659067596|ref|XP_008440286.1| (PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 834.7 bits (2155), Expect = 1.0e-238
Identity = 409/446 (91.70%), Postives = 426/446 (95.52%), Query Frame = 1


Query: 1   MANSISFHQPTHRFISCPQVKDFRSFSSPRFSNYPSTSPKSRLRPIKAATETAAFPLLQP 60
           MANSISFH PTHRFISCPQVKDFRSF SPRF+   STSPK+RLRPIKAAT   AFPLLQP
Sbjct: 1   MANSISFHHPTHRFISCPQVKDFRSFPSPRFTYNSSTSPKTRLRPIKAATGLPAFPLLQP 60

Query: 61  PKADESSPSELEPADPDFYKIGFVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIME 120
           PKADES PSELEPADPDFYKIG+VRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIME
Sbjct: 61  PKADES-PSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIME 120

Query: 121 IPLELMLTISQKLPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDRDDNFW 180
           IPLE+MLTISQKLPWMFFPDIIPVGHPIFDIINST+PETDWDLRLACLLLYAFDR+DNFW
Sbjct: 121 IPLEIMLTISQKLPWMFFPDIIPVGHPIFDIINSTDPETDWDLRLACLLLYAFDREDNFW 180

Query: 181 QLYGDFLPSIDECTSLLLASEEELLELQDQNLASSIRDQQHRALDFWERNWHSGVPLKIK 240
           QLYGDFLPSIDECTSLLLASEEEL ELQDQNLAS+IRDQQ RAL+FWERNWHSGVPLKIK
Sbjct: 181 QLYGDFLPSIDECTSLLLASEEELSELQDQNLASTIRDQQRRALEFWERNWHSGVPLKIK 240

Query: 241 RLARDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFKD 300
           RLARDPKRFIWAVSIAQSRCINM+TRIGALVQ+ANMLIPYADM+NHSF PNCFFHWRFKD
Sbjct: 241 RLARDPKRFIWAVSIAQSRCINMETRIGALVQNANMLIPYADMMNHSFEPNCFFHWRFKD 300

Query: 301 RMLEVMINAGQQIKKGQEMTVNYMNGQTNDMFLQRYGFSSSVNPWDMIEFSGNARIHLDS 360
           RMLEVMINAGQQIKKGQEMTVNYMNGQ N+MFLQRYGFSS VNPWDMI+FSGNA IHLDS
Sbjct: 301 RMLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSGNACIHLDS 360

Query: 361 FLSVFNIAGLPDGYYYN---GRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKA 420
           FLSVFNIAGLP+ YYYN   GRLS +EDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKA
Sbjct: 361 FLSVFNIAGLPENYYYNAIAGRLSKKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKA 420

Query: 421 VKELQEECQRMLAAFPTTSEQDQKIL 444
           VKELQEECQRMLAAFPTTSE+DQK+L
Sbjct: 421 VKELQEECQRMLAAFPTTSEKDQKLL 445

[Close]

BLAST of CmoCh13G008670 vs. NCBI nr
Match: gi|359473101|ref|XP_002275523.2| (PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic isoform X2 [Vitis vinifera])

HSP 1 Score: 721.8 bits (1862), Expect = 9.8e-205
Identity = 349/444 (78.60%), Postives = 391/444 (88.06%), Query Frame = 1


Query: 1   MANSISFHQPTHRFISCPQ-VKDFRSFSSPRFSNYPSTSPKSRLRPIKAATETAAFPLLQ 60
           MA+S   H PTH FIS  Q   +  S S P +S    +   + +RPIKAA E   FPL +
Sbjct: 1   MASSPLLHHPTHCFISSNQGFCNGLSSSRPNYSWMRGSG--NNIRPIKAAVEMPPFPLFE 60

Query: 61  PPKADESSPSELEPADPDFYKIGFVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIM 120
           PP+ +  +PS+LEPADPDFYKIG+VRS+RAYG+EFKEGPDGFGVYASKDVEPLRRAR+IM
Sbjct: 61  PPQIESDTPSQLEPADPDFYKIGYVRSVRAYGVEFKEGPDGFGVYASKDVEPLRRARMIM 120

Query: 121 EIPLELMLTISQKLPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDRDDNF 180
           EIPLELMLTI +KLPWMFFPDI+PVGHPIFDIINSTNPETDWDLRLACLLL+AFD++DNF
Sbjct: 121 EIPLELMLTIRKKLPWMFFPDIVPVGHPIFDIINSTNPETDWDLRLACLLLFAFDQEDNF 180

Query: 181 WQLYGDFLPSIDECTSLLLASEEELLELQDQNLASSIRDQQHRALDFWERNWHSGVPLKI 240
           WQLYGDFLPS  ECTSLLLA EE+LLELQD  LAS++RDQQ RA +FWE+NWHSGVPLKI
Sbjct: 181 WQLYGDFLPSEGECTSLLLAKEEDLLELQDPKLASTMRDQQRRASEFWEKNWHSGVPLKI 240

Query: 241 KRLARDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFK 300
           KRLARDP RFIWAVSIAQSRCINMQ RIGALVQDANMLIPYADMLNHSF+PNCFFHWRFK
Sbjct: 241 KRLARDPNRFIWAVSIAQSRCINMQMRIGALVQDANMLIPYADMLNHSFQPNCFFHWRFK 300

Query: 301 DRMLEVMINAGQQIKKGQEMTVNYMNGQTNDMFLQRYGFSSSVNPWDMIEFSGNARIHLD 360
           DRMLEVMINAGQ+IKKG+EMTVNYM+G  NDM +QRYGFSS VNPWD+I+FSGNA+IHLD
Sbjct: 301 DRMLEVMINAGQRIKKGEEMTVNYMSGLKNDMLMQRYGFSSPVNPWDVIQFSGNAQIHLD 360

Query: 361 SFLSVFNIAGLPDGYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVK 420
           SFLSVFNI+GLP+ YY+N RLSN  D+FVDGAVIAAAR+LP+WSDGD+PP PS ERKAVK
Sbjct: 361 SFLSVFNISGLPEEYYHNSRLSNNGDSFVDGAVIAAARTLPTWSDGDVPPMPSMERKAVK 420

Query: 421 ELQEECQRMLAAFPTTSEQDQKIL 444
           +LQEECQ+ML  FPTTSEQDQKIL
Sbjct: 421 QLQEECQQMLLEFPTTSEQDQKIL 442

The following BLAST results are available for this feature:

BLAST of CmoCh13G008670 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PTA14_ARATH	2.2e-188	71.85	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 OS=Arabidopsis thaliana GN=PTAC14 PE...	[more]
RBCMT_ARATH	1.8e-09	22.73	[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic OS=Ar...	[more]

BLAST of CmoCh13G008670 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTZ8_CUCSA	2.4e-242	93.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051910 PE=4 SV=1	[more]
D7T9R5_VITVI	6.8e-205	78.60	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g01080 PE=4 SV=...	[more]
A0A067LF45_JATCU	4.9e-203	76.10	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26668 PE=4 SV=1	[more]
B9SQ68_RICCO	1.1e-202	77.58	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1195930 PE=4 SV=1	[more]
M5WHC5_PRUPE	2.1e-201	77.63	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004855mg PE=4 SV=1	[more]

BLAST of CmoCh13G008670 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G20130.1	1.2e-189	71.85	plastid transcriptionally active 14	[more]
AT5G44710.1	4.7e-40	77.45	Ribosomal protein S27/S33, mitochondrial (InterPro:IPR013219)	[more]
AT1G14030.1	1.0e-10	22.73	Rubisco methyltransferase family protein	[more]

BLAST of CmoCh13G008670 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449474044\|ref\|XP_004154058.1\|	3.4e-242	93.00	PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methy...	[more]
gi\|778658245\|ref\|XP_011652361.1\|	1.4e-240	92.38	PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methy...	[more]
gi\|659067598\|ref\|XP_008440293.1\|	2.5e-240	92.33	PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methy...	[more]
gi\|659067596\|ref\|XP_008440286.1\|	1.0e-238	91.70	PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methy...	[more]
gi\|359473101\|ref\|XP_002275523.2\|	9.8e-205	78.60	PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methy...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001214	SET_dom
IPR013219	Ribosomal_S27/S33_mit
IPR015353	Rubisco_LSMT_subst-bd

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0006655	phosphatidylglycerol biosynthetic process
biological_process	GO:0008150	biological_process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
biological_process	GO:0016925	protein sumoylation
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0006399	tRNA metabolic process
biological_process	GO:0042793	transcription from plastid promoter
biological_process	GO:0010103	stomatal complex morphogenesis
biological_process	GO:0006364	rRNA processing
biological_process	GO:0045036	protein targeting to chloroplast
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009508	plastid chromosome
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0000427	plastid-encoded plastid RNA polymerase complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G008670.1	CmoCh13G008670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001214	SET domain	PFAM	PF00856	SET	coord: 100..323 score: 1.1
IPR001214	SET domain	PROFILE	PS50280	SET	coord: 79..324 score: 9
IPR013219	Ribosomal protein S27/S33, mitochondrial	PFAM	PF08293	MRP-S33	coord: 534..607 score: 4.8
IPR015353	Rubisco LSMT, substrate-binding domain	GENE3D	G3DSA:3.90.1420.10		coord: 334..448 score: 4.9
IPR015353	Rubisco LSMT, substrate-binding domain	PFAM	PF09273	Rubis-subs-bind	coord: 401..445 score: 3.
IPR015353	Rubisco LSMT, substrate-binding domain	unknown	SSF81822	RuBisCo LSMT C-terminal, substrate-binding domain	coord: 335..449 score: 1.11
None	No IPR available	unknown	Coil	Coil	coord: 190..210 scor
None	No IPR available	GENE3D	G3DSA:3.90.1410.10		coord: 92..333 score: 8.8
None	No IPR available	PANTHER	PTHR13271	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	coord: 37..443 score: 6.1E
None	No IPR available	PANTHER	PTHR13271:SF23	N-LYSINE METHYLTRANSFERASE EFM1	coord: 37..443 score: 6.1E
None	No IPR available	unknown	SSF82199	SET domain	coord: 99..338 score: 5.63

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh13G008670	Cucsa.134600	Cucumber (Gy14) v1	cgycmoB0363
CmoCh13G008670	CmaCh13G008380	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G008670	Cla002655	Watermelon (97103) v1	cmowmB175
CmoCh13G008670	Csa1G051910	Cucumber (Chinese Long) v2	cmocuB189
CmoCh13G008670	MELO3C002397	Melon (DHL92) v3.5.1	cmomeB183
CmoCh13G008670	ClCG03G004130	Watermelon (Charleston Gray)	cmowcgB186
CmoCh13G008670	CSPI01G09990	Wild cucumber (PI 183967)	cmocpiB193
CmoCh13G008670	Lsi02G005360	Bottle gourd (USVL1VR-Ls)	cmolsiB192
CmoCh13G008670	MELO3C002397.2	Melon (DHL92) v3.6.1	cmomedB206
CmoCh13G008670	CsaV3_1G010060	Cucumber (Chinese Long) v3	cmocucB0222
CmoCh13G008670	Cla97C03G055290	Watermelon (97103) v2	cmowmbB211
CmoCh13G008670	BhiUN316G34	Wax gourd	cmowgoB0243
CmoCh13G008670	CsGy1G010020	Cucumber (Gy14) v2	cgybcmoB058
CmoCh13G008670	Carg07630	Silver-seed gourd	carcmoB1349

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G008670	Cucurbita moschata (Rifu)	cmocmoB166
CmoCh13G008670	Cucurbita maxima (Rimu)	cmacmoB400
CmoCh13G008670	Cucurbita pepo (Zucchini)	cmocpeB184
CmoCh13G008670	Cucurbita pepo (Zucchini)	cmocpeB201
CmoCh13G008670	Silver-seed gourd	carcmoB0670