BLAST of CmoCh13G008010 vs. Swiss-Prot
Match:
PP426_ARATH (Pentatricopeptide repeat-containing protein At5g50280, chloroplastic OS=Arabidopsis thaliana GN=EMB1006 PE=2 SV=1)
HSP 1 Score: 842.0 bits (2174), Expect = 4.7e-243
Identity = 445/723 (61.55%), Postives = 539/723 (74.55%), Query Frame = 1
Query: 3 LVHQHHLPQSFQSIRKANLKQSTSNSCLFFQFSTRKLAGCLCATSPNPISQSPSPIFLPF 62
L H+ H P + +R + ++ S L ATSP+ S SPS IFL
Sbjct: 19 LSHRLHFPVPYLLLRSSFFRKPLS----------------LSATSPSSSSSSPS-IFLSC 78
Query: 63 LEE---------------EEEEEEEEEDEEEHKEVLGGNTTEDWNDPLVRFFKSRTST-- 122
++ EE E EEED+EE +D+ DP+++FFKSRT T
Sbjct: 79 FDDALPDKIQQPENSTINSEESECEEEDDEEG---------DDFTDPILKFFKSRTLTSE 138
Query: 123 -TQDPLPESKLSLQKNRRSSWHLASDVECSVEAEIAPGEDKKQSGLVSRNSRAL------ 182
T DP ESK SLQKNRR+SWHLA D E EI E K + + N + L
Sbjct: 139 STADPARESKFSLQKNRRTSWHLAPDF-ADPETEI---ESKPEESVFVTNQQTLGVHIPF 198
Query: 183 PDGVVGDIVRTARNLPQNTTLGEALGDFEGKIDEKECLEVLRLLGEENLVVCCLYFFEWM 242
GV +I+ A+NL +N TLGE L FE ++ + EC+E L ++GE V CLYF+EWM
Sbjct: 199 ESGVAREILELAKNLKENQTLGEMLSGFERRVSDTECVEALVMMGESGFVKSCLYFYEWM 258
Query: 243 GLQEPSLVTPRAYSILFPLLGRAGMGDKIMVLFKNIPLKKELQDVHVYNSAMSGLMVCKR 302
LQEPSL +PRA S+LF LLGR M D I++L N+P K+E +DV +YN+A+SGL +R
Sbjct: 259 SLQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQR 318
Query: 303 YNDACEVYAAMETNKVNPDHVTCSIMITVMRKIGRSAKDSWDYFEKMNEKGVKWSPEVLG 362
Y+DA EVY AM+ V PD+VTC+I+IT +RK GRSAK+ W+ FEKM+EKGVKWS +V G
Sbjct: 319 YDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFG 378
Query: 363 ALIKAFCDEGLKSQALIIQLEMEKKGVTSNAIVYNTIMDAFSKSNQIEEAEGLFAEMKAK 422
L+K+FCDEGLK +AL+IQ EMEKKG+ SN IVYNT+MDA++KSN IEE EGLF EM+ K
Sbjct: 379 GLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDK 438
Query: 423 GVKPTSATFNILMDAYSRRMQPEIVEKLLIEMKDTGFEPNVKSYTCLISAYGRKKTMSDM 482
G+KP++AT+NILMDAY+RRMQP+IVE LL EM+D G EPNVKSYTCLISAYGR K MSDM
Sbjct: 439 GLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDM 498
Query: 483 AADAFLRMKKNGIKPNSHSYTALIHAYSVSGWHEKAYSTFENMLQEGLKPSIETYTTLLD 542
AADAFLRMKK G+KP+SHSYTALIHAYSVSGWHEKAY++FE M +EG+KPS+ETYT++LD
Sbjct: 499 AADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLD 558
Query: 543 AFRRAGDTEALMKIWKLMIREKVAGTRVTFNILLDGFAKQGHYIEARDVISEFSKTGLQP 602
AFRR+GDT LM+IWKLM+REK+ GTR+T+N LLDGFAKQG YIEARDV+SEFSK GLQP
Sbjct: 559 AFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQP 618
Query: 603 TIMTYNMLMNAYARGGQHLKMPQLLQEMAARELKPDSVTYSTMIYAFVRVRDFKRAFFYH 662
++MTYNMLMNAYARGGQ K+PQLL+EMAA LKPDS+TYSTMIYAFVRVRDFKRAFFYH
Sbjct: 619 SVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYH 678
Query: 663 KKMVKSGQVPDVKSYQKLRSILDAKLDTKNRKDKSAILGIMNSKLGMVKAKKKGKKDEFW 702
K MVKSGQVPD +SY+KLR+IL+ K TKNRKDK+AILGI+NSK G VKAK KGKKDEFW
Sbjct: 679 KMMVKSGQVPDPRSYEKLRAILEDKAKTKNRKDKTAILGIINSKFGRVKAKTKGKKDEFW 711
BLAST of CmoCh13G008010 vs. Swiss-Prot
Match:
PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1)
HSP 1 Score: 183.3 bits (464), Expect = 9.2e-45
Identity = 124/459 (27.02%), Postives = 212/459 (46.19%), Query Frame = 1
Query: 176 NTTLGEALGDFEGKIDE--KECLEVLRLLGEENLVVCCLYFFEWMGLQEP--SLVTPRAY 235
++ L E F+ K + E L L+ LG L F+W Q+ S++
Sbjct: 117 DSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVV 176
Query: 236 SILFPLLGRAGMGDKIMVLFKNIPLKKELQDVHVYNSAMSGLMVCKRYNDACEVYAAMET 295
+I+ +LG+ G +F + DV+ Y S +S RY +A V+ ME
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236
Query: 296 NKVNPDHVTCSIMITVMRKIGRSAKDSWDYFEKMNEKGVKWSPEVLGALIKAFCDEGLKS 355
+ P +T ++++ V K+G EKM G+ LI L
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 356 QALIIQLEMEKKGVTSNAIVYNTIMDAFSKSNQIEEAEGLFAEMKAKGVKPTSATFNILM 415
+A + EM+ G + + + YN ++D + KS++ +EA + EM G P+ T+N L+
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 416 DAYSRRMQPEIVEKLLIEMKDTGFEPNVKSYTCLISAYGRKKTMSDMAADAFLRMKKNGI 475
AY+R + +L +M + G +P+V +YT L+S + R + + A F M+ G
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV-ESAMSIFEEMRNAGC 416
Query: 476 KPNSHSYTALIHAYSVSGWHEKAYSTFENMLQEGLKPSIETYTTLLDAFRRAGDTEALMK 535
KPN ++ A I Y G + F+ + GL P I T+ TLL F + G +
Sbjct: 417 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 476
Query: 536 IWKLMIREKVAGTRVTFNILLDGFAKQGHYIEARDVISEFSKTGLQPTIMTYNMLMNAYA 595
++K M R R TFN L+ +++ G + +A V G+ P + TYN ++ A A
Sbjct: 477 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 536
Query: 596 RGGQHLKMPQLLQEMAARELKPDSVTYSTMIYAFVRVRD 631
RGG + ++L EM KP+ +TY ++++A+ ++
Sbjct: 537 RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE 574
BLAST of CmoCh13G008010 vs. Swiss-Prot
Match:
PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 172.9 bits (437), Expect = 1.2e-41
Identity = 114/410 (27.80%), Postives = 195/410 (47.56%), Query Frame = 1
Query: 250 LFKNIPLKKELQDVHVYNSAMSGLMVCKRYNDACEVYAAMETNKVNPDHVTCSIMITVMR 309
+FK + + +V YN + G + A ++ MET P+ VT + +I
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 310 KIGRSAKDSWDYFEKMNEKGVKWSPEVLGALIKAFCDEGLKSQALIIQLEMEKKGVTSNA 369
K+ R D + M KG++ + +I C EG + + EM ++G + +
Sbjct: 252 KL-RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 311
Query: 370 IVYNTIMDAFSKSNQIEEAEGLFAEMKAKGVKPTSATFNILMDAYSRRMQPEIVEKLLIE 429
+ YNT++ + K +A + AEM G+ P+ T+ L+ + + + L +
Sbjct: 312 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 371
Query: 430 MKDTGFEPNVKSYTCLISAYGRKKTMSDMAADAFLRMKKNGIKPNSHSYTALIHAYSVSG 489
M+ G PN ++YT L+ + +K M++ A M NG P+ +Y ALI+ + V+G
Sbjct: 372 MRVRGLCPNERTYTTLVDGFSQKGYMNE-AYRVLREMNDNGFSPSVVTYNALINGHCVTG 431
Query: 490 WHEKAYSTFENMLQEGLKPSIETYTTLLDAFRRAGDTEALMKIWKLMIREKVAGTRVTFN 549
E A + E+M ++GL P + +Y+T+L F R+ D + +++ + M+ + + +T++
Sbjct: 432 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 491
Query: 550 ILLDGFAKQGHYIEARDVISEFSKTGLQPTIMTYNMLMNAYARGGQHLKMPQLLQEMAAR 609
L+ GF +Q EA D+ E + GL P TY L+NAY G K QL EM +
Sbjct: 492 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 551
Query: 610 ELKPDSVTYSTMIYAF---VRVRDFKRAFFYHKKMVKSGQVPDVKSYQKL 657
+ PD VTYS +I R R+ KR K+ VP +Y L
Sbjct: 552 GVLPDVVTYSVLINGLNKQSRTREAKRLLL---KLFYEESVPSDVTYHTL 596
BLAST of CmoCh13G008010 vs. Swiss-Prot
Match:
PP163_ARATH (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1)
HSP 1 Score: 171.8 bits (434), Expect = 2.8e-41
Identity = 117/475 (24.63%), Postives = 223/475 (46.95%), Query Frame = 1
Query: 189 KIDEKECLEVLRLLGEENLVVCCLYFFEWMGLQEPSLVTPRAYSILFPLLGRAGMGDKIM 248
K+D + +R+LG E+ + + LQE L+ RAY+ + R G +K +
Sbjct: 172 KLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQE-YLLDVRAYTTILHAYSRTGKYEKAI 231
Query: 249 VLFKNIPLKKELQDVHVYNSAMSGL-MVCKRYNDACEVYAAMETNKVNPDHVTCSIMITV 308
LF+ + + YN + + + + V M + + D TCS +++
Sbjct: 232 DLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSA 291
Query: 309 MRKIGRSAKDSWDYFEKMNEKGVKWSPEVLGALIKAFCDEGLKSQALIIQLEMEKKGVTS 368
+ G +++ ++F ++ G + AL++ F G+ ++AL + EME+ +
Sbjct: 292 CAREGL-LREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPA 351
Query: 369 NAIVYNTIMDAFSKSNQIEEAEGLFAEMKAKGVKPTSATFNILMDAYSRRMQPEIVEKLL 428
+++ YN ++ A+ ++ +EA G+ M KGV P + T+ ++DAY + + + KL
Sbjct: 352 DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF 411
Query: 429 IEMKDTGFEPNVKSYTCLISAYGRKKTMSDMAADAFLRMKKNGIKPNSHSYTALIHAYSV 488
MK+ G PN +Y ++S G+K ++M MK NG PN ++ ++
Sbjct: 412 YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEM-IKMLCDMKSNGCSPNRATWNTMLALCGN 471
Query: 489 SGWHEKAYSTFENMLQEGLKPSIETYTTLLDAFRRAGDTEALMKIWKLMIREKVAGTRVT 548
G + F M G +P +T+ TL+ A+ R G K++ M R T
Sbjct: 472 KGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTT 531
Query: 549 FNILLDGFAKQGHYIEARDVISEFSKTGLQPTIMTYNMLMNAYARGGQHLKMPQLLQEMA 608
+N LL+ A++G + +VIS+ G +PT +Y++++ YA+GG +L + ++ +
Sbjct: 532 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 591
Query: 609 ARELKPDSVTYSTMIYAFVRVRDF---KRAFFYHKKMVKSGQVPDVKSYQKLRSI 660
++ P + T++ A + R +RAF K K G PD+ + + SI
Sbjct: 592 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK---KHGYKPDMVIFNSMLSI 640
BLAST of CmoCh13G008010 vs. Swiss-Prot
Match:
PP124_ARATH (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1)
HSP 1 Score: 170.6 bits (431), Expect = 6.1e-41
Identity = 111/497 (22.33%), Postives = 229/497 (46.08%), Query Frame = 1
Query: 163 VGDIVRTARNLPQNTTLGEALGDFEGKIDEKECLEVLRLLGEENLVVCCLYFFEWMGLQE 222
V ++ +LP ++ L F+ K+ + V + L F++M Q
Sbjct: 76 VESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQI 135
Query: 223 PSLVTPRAYSILFPLLGRAGMGDKIMVLFKNIPLKKELQDVHVYNSAMSGLMVCKRYNDA 282
Y+I+ LLGR G+ DK + +F +P + + V Y + ++ RY +
Sbjct: 136 WCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETS 195
Query: 283 CEVYAAMETNKVNPDHVTCSIMITVMRKIGRSAKDSWDYFEKMNEKGVKWSPEVLGALIK 342
E+ M+ K++P +T + +I + G + F +M +G++ L+
Sbjct: 196 LELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLS 255
Query: 343 AFCDEGLKSQALIIQLEMEKKGVTSNAIVYNTIMDAFSKSNQIEEAEGLFAEMKAKGVKP 402
A GL +A ++ M G+ + Y+ +++ F K ++E+ L EM + G P
Sbjct: 256 ACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP 315
Query: 403 TSATFNILMDAYSRRMQPEIVEKLLIEMKDTGFEPNVKSYTCLISAYGRKKTMSDMAADA 462
++N+L++AY++ + + +M+ G PN +Y+ L++ +G+ D+
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDV-RQL 375
Query: 463 FLRMKKNGIKPNSHSYTALIHAYSVSGWHEKAYSTFENMLQEGLKPSIETYTTLLDAFRR 522
FL MK + P++ +Y LI + G+ ++ + F +M++E ++P +ETY ++ A +
Sbjct: 376 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 435
Query: 523 AGDTEALMKIWKLMIREKVAGTRVTFNILLDGFAKQGHYIEARDVISEFSKTGLQPTIMT 582
G E KI + M + + + +++ F + Y EA + + G P+I T
Sbjct: 436 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 495
Query: 583 YNMLMNAYARGGQHLKMPQLLQEMAARELKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMV 642
++ L+ ++ARGG + +L + + + T++ I A+ + F+ A + M
Sbjct: 496 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 555
Query: 643 KSGQVPDVKSYQKLRSI 660
KS PD ++ + + S+
Sbjct: 556 KSRCDPDERTLEAVLSV 571
BLAST of CmoCh13G008010 vs. TrEMBL
Match:
A0A0A0LWH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050000 PE=4 SV=1)
HSP 1 Score: 1164.8 bits (3012), Expect = 0.0e+00
Identity = 597/708 (84.32%), Postives = 637/708 (89.97%), Query Frame = 1
Query: 1 MALVHQHHLPQSFQSIRKANLKQSTSNSCLFFQFSTRKLAGCLCATSPNPISQSPSPIFL 60
MALV QHHL F SI ANLKQ+TSNS FFQ +T+KLA CLCA SPNP +QSPSPIFL
Sbjct: 1 MALVQQHHLTYPFLSIAGANLKQNTSNSFSFFQSNTQKLACCLCAASPNPSTQSPSPIFL 60
Query: 61 PFLEEEEEEEEEEEDEEEHKEVLGGNTTE-DWNDPLVRFFKSRTSTTQDPLPESKLSLQK 120
EEEEEEEEEE KE GGN TE DWNDPL RFFKS+TSTTQDP ESKL LQK
Sbjct: 61 HLFEEEEEEEEEEVPS---KEGHGGNKTEEDWNDPLFRFFKSQTSTTQDPSRESKLPLQK 120
Query: 121 NRRSSWHLASDVECSVEAEIAPGEDKKQSGLVSRNSRALPDGVVGDIVRTARNLPQNTTL 180
NRRSSWHLASDVE EAE+ EDK+Q SRNSR LP G VG+IV ARNL QN TL
Sbjct: 121 NRRSSWHLASDVEFFNEAEVTLEEDKEQLRSASRNSRVLPGGPVGEIVGIARNLSQNMTL 180
Query: 181 GEALGDFEGKIDEKECLEVLRLLGEENLVVCCLYFFEWMGLQEPSLVTPRAYSILFPLLG 240
GEALG+FEG+I EKEC EVLRLLGEENLVVCCLYFFEWMGLQE SLVT RAYS+LFPLLG
Sbjct: 181 GEALGEFEGRISEKECWEVLRLLGEENLVVCCLYFFEWMGLQETSLVTSRAYSLLFPLLG 240
Query: 241 RAGMGDKIMVLFKNIPLKKELQDVHVYNSAMSGLMVCKRYNDACEVYAAMETNKVNPDHV 300
RAGMG+KIMVLFKN+PLKKE QDVHVYNSA+SGLMVCKRY+DAC+VY AMETN VNPDHV
Sbjct: 241 RAGMGEKIMVLFKNLPLKKEFQDVHVYNSAISGLMVCKRYDDACKVYEAMETNNVNPDHV 300
Query: 301 TCSIMITVMRKIGRSAKDSWDYFEKMNEKGVKWSPEVLGALIKAFCDEGLKSQALIIQLE 360
TCSIMITVMRKIGRSAKDSWDYFEKMN+KGVKWS EVLGALIK+FCDEGLKSQALI+QLE
Sbjct: 301 TCSIMITVMRKIGRSAKDSWDYFEKMNQKGVKWSSEVLGALIKSFCDEGLKSQALILQLE 360
Query: 361 MEKKGVTSNAIVYNTIMDAFSKSNQIEEAEGLFAEMKAKGVKPTSATFNILMDAYSRRMQ 420
MEKKGV SN I+YNTIMDAFSKSNQIEEAEG+FAEMK+KGVKPTSA+FNILM+AYSRRMQ
Sbjct: 361 MEKKGVASNVIMYNTIMDAFSKSNQIEEAEGVFAEMKSKGVKPTSASFNILMNAYSRRMQ 420
Query: 421 PEIVEKLLIEMKDTGFEPNVKSYTCLISAYGRKKTMSDMAADAFLRMKKNGIKPNSHSYT 480
PEIVEKLL+EMKD G EPNVKSYTCLISAYGR+K MSDMAADAFLRMKKNGI+P SHSYT
Sbjct: 421 PEIVEKLLVEMKDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKNGIRPTSHSYT 480
Query: 481 ALIHAYSVSGWHEKAYSTFENMLQEGLKPSIETYTTLLDAFRRAGDTEALMKIWKLMIRE 540
ALIHAYSVSGWHEKAYS FENML+EGLKPSIETYTTLLDAFRRAGDT +LMKIWKLMIRE
Sbjct: 481 ALIHAYSVSGWHEKAYSAFENMLREGLKPSIETYTTLLDAFRRAGDTVSLMKIWKLMIRE 540
Query: 541 KVAGTRVTFNILLDGFAKQGHYIEARDVISEFSKTGLQPTIMTYNMLMNAYARGGQHLKM 600
KV GTRVTFN LLDGFAK GHY+EARDVISEF K GLQPT+MTYNMLMNAYARGGQHLK+
Sbjct: 541 KVLGTRVTFNTLLDGFAKHGHYVEARDVISEFDKIGLQPTVMTYNMLMNAYARGGQHLKL 600
Query: 601 PQLLQEMAARELKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMVKSGQVPDVKSYQKLRSI 660
PQLLQEMAAR+LKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMVKSGQVPDVKSYQKL+SI
Sbjct: 601 PQLLQEMAARDLKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMVKSGQVPDVKSYQKLKSI 660
Query: 661 LDAKLDTKNRKDKSAILGIMNSKLGMVKAKKKGKKDEFWKNKRKYVKT 708
LD KL TKNRKDKSAILGI+NSK+GMVKAKK+GKKDEFWK KR++V+T
Sbjct: 661 LDVKLATKNRKDKSAILGIINSKMGMVKAKKQGKKDEFWKTKRRHVRT 705
BLAST of CmoCh13G008010 vs. TrEMBL
Match:
A0A061G5M6_THECC (Pentatricopeptide repeat superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_014542 PE=4 SV=1)
HSP 1 Score: 949.9 bits (2454), Expect = 1.8e-273
Identity = 488/697 (70.01%), Postives = 567/697 (81.35%), Query Frame = 1
Query: 21 LKQSTSNSCLFFQFSTRKLAGCLCATSPNPISQSPSPIFLPFLEEEEEEEEEEEDEEEHK 80
L S LF S + + AT P P S SPIFLPFL+E +++E E E+ + +
Sbjct: 21 LNNHPSKPPLFLSTSKSFPSFSISATPPPPTPHSSSPIFLPFLQEPQQQELETENPKSQE 80
Query: 81 EVLGGNTTEDWNDPLVRFFKSRTSTTQDPLPESKLSLQKNRRSSWHLASDV--------- 140
G +D DP++RFFKSR ST DP + K SLQKNRRSSWHLA D+
Sbjct: 81 L---GKEEDDVKDPIIRFFKSRPSTP-DPPRQGKFSLQKNRRSSWHLAPDIRSLPDPESD 140
Query: 141 -ECSVEAEIAPGEDKKQSGLVSRNSRALPDGVVGDIVRTARNLPQNTTLGEALGDFEGKI 200
E + E E K+ + LP G+VGDIVR A+NLP+N+TLGE LG ++GK+
Sbjct: 141 SEPEPDGENIFSEAKQHLDSTPEDYTELPVGIVGDIVRIAKNLPENSTLGELLGGYQGKV 200
Query: 201 DEKECLEVLRLLGEENLVVCCLYFFEWMGLQEPSLVTPRAYSILFPLLGRAGMGDKIMVL 260
+KECLEVL L+G+E LV+ CLYFFEWMGLQEP LVTPRA S+LFP+LGRAGMGDK+MVL
Sbjct: 201 SQKECLEVLVLMGKEGLVLGCLYFFEWMGLQEPLLVTPRACSVLFPVLGRAGMGDKLMVL 260
Query: 261 FKNIPLKKELQDVHVYNSAMSGLMVCKRYNDACEVYAAMETNKVNPDHVTCSIMITVMRK 320
F+N+P + +DVHVYN+ +SGL+ KRY+DA +VY AME N V PDHVTCSI+IT+MRK
Sbjct: 261 FRNLPQSRVFRDVHVYNATISGLLCSKRYDDAWKVYEAMEANNVQPDHVTCSIVITIMRK 320
Query: 321 IGRSAKDSWDYFEKMNEKGVKWSPEVLGALIKAFCDEGLKSQALIIQLEMEKKGVTSNAI 380
GRSAKD+W++FE+MN KGVKWSPEVLGA+IK+FCDEGLK +ALIIQ EMEKKGV SNAI
Sbjct: 321 TGRSAKDAWEFFERMNRKGVKWSPEVLGAIIKSFCDEGLKHEALIIQSEMEKKGVPSNAI 380
Query: 381 VYNTIMDAFSKSNQIEEAEGLFAEMKAKGVKPTSATFNILMDAYSRRMQPEIVEKLLIEM 440
VYNT+MDA+SKSNQIEE EGLFAEMKAKG+ PTSATFNILMDAYSRRMQPEIVE LL+EM
Sbjct: 381 VYNTLMDAYSKSNQIEEVEGLFAEMKAKGLVPTSATFNILMDAYSRRMQPEIVENLLLEM 440
Query: 441 KDTGFEPNVKSYTCLISAYGRKKTMSDMAADAFLRMKKNGIKPNSHSYTALIHAYSVSGW 500
+D G +P+ KSYTCLISAYGR+K MSD AADAFLRMKK G+KP SHSYT+LIHAYS+SGW
Sbjct: 441 QDMGLKPDAKSYTCLISAYGRQKKMSDKAADAFLRMKKVGVKPTSHSYTSLIHAYSISGW 500
Query: 501 HEKAYSTFENMLQEGLKPSIETYTTLLDAFRRAGDTEALMKIWKLMIREKVAGTRVTFNI 560
HEKAY+ FENML+EGLK SIETYTTLLDAFRRAGDT+ LMKIWKLMI EKV GTRVTFNI
Sbjct: 501 HEKAYTAFENMLREGLKLSIETYTTLLDAFRRAGDTQILMKIWKLMISEKVEGTRVTFNI 560
Query: 561 LLDGFAKQGHYIEARDVISEFSKTGLQPTIMTYNMLMNAYARGGQHLKMPQLLQEMAARE 620
LLDGFAKQG YIEARDVISEF K GLQPT+MTYNMLMNAYARGGQH K+PQLL+EMAA
Sbjct: 561 LLDGFAKQGQYIEARDVISEFGKIGLQPTLMTYNMLMNAYARGGQHQKLPQLLKEMAALN 620
Query: 621 LKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMVKSGQVPDVKSYQKLRSILDAKLDTKNRK 680
LKPDSVTYSTMIYAFVRVRDFKRAF+YHK+MVKSGQVPDVKSY+KL++ILD K KN+K
Sbjct: 621 LKPDSVTYSTMIYAFVRVRDFKRAFYYHKQMVKSGQVPDVKSYEKLKAILDVKAAKKNKK 680
Query: 681 DKSAILGIMNSKLGMVKAKKKGKKDEFWKNKRKYVKT 708
D+SAILGI+NSK+GMVKAK+K KKDE WKNK+++ KT
Sbjct: 681 DRSAILGIINSKMGMVKAKRKTKKDELWKNKKRHHKT 713
BLAST of CmoCh13G008010 vs. TrEMBL
Match:
W9S5W3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008195 PE=4 SV=1)
HSP 1 Score: 937.2 bits (2421), Expect = 1.2e-269
Identity = 479/662 (72.36%), Postives = 553/662 (83.53%), Query Frame = 1
Query: 52 SQSPSPIFLPFLEEEEEEEEEEEDEEEHKEVLGGNTTEDWNDPLVRFFKSRTSTTQDPLP 111
S S S IFLPFL+EEEEEEE E E +E E+ DPLV+FFKSR TTQDP
Sbjct: 51 SLSSSSIFLPFLQEEEEEEENEVINNEEQESKPCEKEEE-EDPLVKFFKSRP-TTQDPQR 110
Query: 112 ESKLSLQKNRRSSWHLASDVECSVEAE------IAPGEDKKQSGLVSRNSRALPDGVVGD 171
E +LSLQKNRRSSWHLA D E + E E IA +K+Q + +P+G+ G+
Sbjct: 111 EGRLSLQKNRRSSWHLAPDSEFADEPETESDSNIAESLEKEQR--KKQEFEQIPEGIAGE 170
Query: 172 IVRTARNLPQNTTLGEALGDFEGKIDEKECLEVLRLLGEENLVVCCLYFFEWMGLQEPSL 231
I+R ARNLPQN TLGEAL FEG++ +EC+EVL L+GEE L + CLYFFEWMGLQEPSL
Sbjct: 171 ILRIARNLPQNLTLGEALEGFEGRVGARECVEVLGLMGEEGLFMGCLYFFEWMGLQEPSL 230
Query: 232 VTPRAYSILFPLLGRAGMGDKIMVLFKNIPLKKELQDVHVYNSAMSGLMVCKRYNDACEV 291
VTPRA S+LFPLLGRAG+GDK+MVLF+N+P+KKE +DVHVYN+A+SGLM KRY DA +V
Sbjct: 231 VTPRACSVLFPLLGRAGLGDKLMVLFENLPMKKEFRDVHVYNAAISGLMCSKRYGDAWKV 290
Query: 292 YAAMETNKVNPDHVTCSIMITVMRKIGRSAKDSWDYFEKMNEKGVKWSPEVLGALIKAFC 351
Y AME N + PDHVTCSIMIT+MRKIGRSAK++W++FE+MN KGVKWSPEVLGALIKAFC
Sbjct: 291 YEAMEANNIRPDHVTCSIMITIMRKIGRSAKEAWEFFERMNRKGVKWSPEVLGALIKAFC 350
Query: 352 DEGLKSQALIIQLEMEKKGVTSNAIVYNTIMDAFSKSNQIEEAEGLFAEMKAKGVKPTSA 411
DEGLKS+AL+IQ+EM KKGV NAIVYNTIMDAF KSNQ+EEAEGLFAEMK KG+KPTSA
Sbjct: 351 DEGLKSEALVIQIEMAKKGVFPNAIVYNTIMDAFCKSNQVEEAEGLFAEMKLKGIKPTSA 410
Query: 412 TFNILMDAYSRRMQPEIVEKLLIEMKDTGFEPNVKSYTCLISAYGRKKTMSDMAADAFLR 471
TFN+LMDAYSRR+QP++VEKLL EM+D G +PN KSYTCLISAY R+K MSDMAADA LR
Sbjct: 411 TFNVLMDAYSRRIQPDVVEKLLEEMQDLGLDPNAKSYTCLISAYARQK-MSDMAADALLR 470
Query: 472 MKKNGIKPNSHSYTALIHAYSVSGWHEKAYSTFENMLQEGLKPSIETYTTLLDAFRRAGD 531
MKK GI P SHSYTALIHAYSV+GWHEKAY FENM +E LKPSIETYT LLDAFRRAGD
Sbjct: 471 MKKVGINPTSHSYTALIHAYSVTGWHEKAYIAFENMRKERLKPSIETYTALLDAFRRAGD 530
Query: 532 TEALMKIWKLMIREKVAGTRVTFNILLDGFAKQGHYIEARDVISEFSKTGLQPTIMTYNM 591
TE LMKIWK+M++EK+ GTRVTFN L+DGFAKQG Y EARDVIS F K GLQPT+MTYNM
Sbjct: 531 TEMLMKIWKMMLKEKIEGTRVTFNTLVDGFAKQGRYTEARDVISVFGKIGLQPTLMTYNM 590
Query: 592 LMNAYARGGQHLKMPQLLQEMAARELKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMVKSG 651
L+NAYARGGQ K+PQLL+EM+ +LKPDSVTYSTMIYA+VR+RDFKRAFFYHK+MVKSG
Sbjct: 591 LINAYARGGQGSKLPQLLKEMSVLDLKPDSVTYSTMIYAYVRIRDFKRAFFYHKQMVKSG 650
Query: 652 QVPDVKSYQKLRSILDAKLDTKNRKDKSAILGIMNSKLGMVKAKKKGKKDEFWKNKRKYV 708
QVPD KSY+KLRSILD K KN+KDK AILGI+NSK+G++KAKKKGKKDEFWKN++ +
Sbjct: 651 QVPDAKSYEKLRSILDVKAARKNKKDKKAILGIINSKMGLLKAKKKGKKDEFWKNRKMHD 707
BLAST of CmoCh13G008010 vs. TrEMBL
Match:
A0A067K438_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11367 PE=4 SV=1)
HSP 1 Score: 933.7 bits (2412), Expect = 1.3e-268
Identity = 471/670 (70.30%), Postives = 552/670 (82.39%), Query Frame = 1
Query: 35 STRKLAGCLCATSPNPISQSPSPIFLPFLEEEEEEEEEEEDEEEHKEVLGGNTTEDWNDP 94
S R A S P SPS IFLPFLE+EEEE + E +E+ E + DP
Sbjct: 36 SVRPSLPLFAAQSTPPHHSSPS-IFLPFLEKEEEEPKAETQQEQENE----KDEKCLTDP 95
Query: 95 LVRFFKSRTSTTQDPLPESKLSLQKNRRSSWHLASDVECSVEAEIAPGEDKKQSGLVSRN 154
+V+FFKSRTST P P K SLQKNRR+ W LA D+E E +I K ++ + N
Sbjct: 96 IVKFFKSRTSTEDPPRP-GKFSLQKNRRTLWRLAPDIESDTEPDIEDIFIKDENQQMGSN 155
Query: 155 SRALPDGVVGDIVRTARNLPQNTTLGEALGDFEGKIDEKECLEVLRLLGEENLVVCCLYF 214
S +LPDGVVG+I+ AR L +NTTLGE L +EG+I+ +C+EVL+L+GEE ++ CCLYF
Sbjct: 156 SNSLPDGVVGEIINLARGLEENTTLGEQLSAYEGRINAIQCVEVLQLMGEEGMITCCLYF 215
Query: 215 FEWMGLQEPSLVTPRAYSILFPLLGRAGMGDKIMVLFKNIPLKKELQDVHVYNSAMSGLM 274
FEWM LQEPSLVTPRA ++LFP+LGRA MGDK+M+LF+N+P KE +DVHVYNSA+SGL+
Sbjct: 216 FEWMRLQEPSLVTPRACTVLFPILGRARMGDKLMILFRNLPQTKEFRDVHVYNSAISGLL 275
Query: 275 VCKRYNDACEVYAAMETNKVNPDHVTCSIMITVMRKIGRSAKDSWDYFEKMNEKGVKWSP 334
C RY+DA +VY AME N ++ DHVTCSIMIT+MRK G SAK++W++FEKMN KGVKWSP
Sbjct: 276 CCGRYDDAYKVYEAMELNNISADHVTCSIMITIMRKKGCSAKEAWEFFEKMNRKGVKWSP 335
Query: 335 EVLGALIKAFCDEGLKSQALIIQLEMEKKGVTSNAIVYNTIMDAFSKSNQIEEAEGLFAE 394
EVLGALIK+FCDEGLKS+ALIIQ+EM +KG+TSN IVYNT+MDA++KSNQIEE EGLF E
Sbjct: 336 EVLGALIKSFCDEGLKSEALIIQVEMARKGITSNTIVYNTLMDAYNKSNQIEEVEGLFTE 395
Query: 395 MKAKGVKPTSATFNILMDAYSRRMQPEIVEKLLIEMKDTGFEPNVKSYTCLISAYGRKKT 454
MK KG+KPT+ATFNILMDAYSRRMQPEIVEKLL++M+D G EP+VKSYTCLISAYGR+K
Sbjct: 396 MKGKGLKPTTATFNILMDAYSRRMQPEIVEKLLLDMEDAGLEPDVKSYTCLISAYGRQKK 455
Query: 455 MSDMAADAFLRMKKNGIKPNSHSYTALIHAYSVSGWHEKAYSTFENMLQEGLKPSIETYT 514
MSDMAADAFLRM+K GIKP SHSYTALIHAYSV GWHEKAY TFE+M QEG+KPS+ETYT
Sbjct: 456 MSDMAADAFLRMRKVGIKPTSHSYTALIHAYSVGGWHEKAYITFEHMQQEGIKPSVETYT 515
Query: 515 TLLDAFRRAGDTEALMKIWKLMIREKVAGTRVTFNILLDGFAKQGHYIEARDVISEFSKT 574
LLDAFRRAGDT+ LMKIWKLMI EKV GTRVTFNILLDGFAKQG YIEARDVISEF K
Sbjct: 516 ALLDAFRRAGDTQMLMKIWKLMISEKVEGTRVTFNILLDGFAKQGRYIEARDVISEFGKL 575
Query: 575 GLQPTIMTYNMLMNAYARGGQHLKMPQLLQEMAARELKPDSVTYSTMIYAFVRVRDFKRA 634
GLQPT+MTYNMLMNAY RGG+H K+PQLL+EMA LKPDSVTY TMIYA++RVRDFKRA
Sbjct: 576 GLQPTVMTYNMLMNAYGRGGRHSKLPQLLKEMATLSLKPDSVTYLTMIYAYIRVRDFKRA 635
Query: 635 FFYHKKMVKSGQVPDVKSYQKLRSILDAKLDTKNRKDKSAILGIMNSKLGMVKAKKKGKK 694
F YHKKMVKSGQVPD KSYQKLR+IL+ K KNRKD+SAILGI+NS+ G +K KKKGKK
Sbjct: 636 FTYHKKMVKSGQVPDAKSYQKLRAILEEKAKIKNRKDRSAILGIINSQTGWLKVKKKGKK 695
Query: 695 DEFWKNKRKY 705
DEFWK+K+++
Sbjct: 696 DEFWKHKKRH 699
BLAST of CmoCh13G008010 vs. TrEMBL
Match:
B9RT09_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0680230 PE=4 SV=1)
HSP 1 Score: 929.1 bits (2400), Expect = 3.3e-267
Identity = 466/710 (65.63%), Postives = 570/710 (80.28%), Query Frame = 1
Query: 2 ALVHQHHLPQSFQSIRKANLKQSTSNSCLFFQFSTRKLAGCLCATSPNPISQSPSPIFLP 61
AL Q LP S S+ ++ + S LF + + L PI + IFLP
Sbjct: 3 ALQRQVLLPSSLTSLHLSSQNPNYSKPHLFISSKPARPSFPLFVAHSTPIPRFSPSIFLP 62
Query: 62 FLEEEEEEEEEEEDEEEHKEVLGGNTTEDWNDPLVRFFKSRTSTTQDPLPESKLSLQKNR 121
FLE+++E + + + E++ E ++ DP+++FFKSRTSTTQDP E K SLQ+NR
Sbjct: 63 FLEQDQEPKSQIQ-EQQRPEQENNDSDLTLTDPILKFFKSRTSTTQDPPHEGKFSLQRNR 122
Query: 122 RSSWHLASDVECSVEAEIAPGEDKKQSGLVSRNSRALPDGVVGDIVRTARNLPQNTTLGE 181
R+ W LA DVE + + + K L S NS + G+V +I+ AR LP+NT LGE
Sbjct: 123 RTQWRLAPDVESDIGPDDEIDDILKNKLLGSSNSDS-SKGIVREILNLARELPENTILGE 182
Query: 182 ALGDFEGKIDEKECLEVLRLLGEENLVVCCLYFFEWMGLQEPSLVTPRAYSILFPLLGRA 241
LG ++GKI +EC+EVL L+GEE +V CLYFFEWM L EPSLVT R+ ++LFP+LG+A
Sbjct: 183 QLGHYKGKISVEECVEVLELMGEEGMVTSCLYFFEWMRLHEPSLVTSRSCTVLFPILGKA 242
Query: 242 GMGDKIMVLFKNIPLKKELQDVHVYNSAMSGLMVCKRYNDACEVYAAMETNKVNPDHVTC 301
G GD++MVLF N+P KE +DVHVYN+++SGL+ C+RY+DAC+VY AME V+PDHVTC
Sbjct: 243 GKGDELMVLFMNLPQNKEFRDVHVYNASLSGLLYCQRYDDACKVYEAMEAQNVSPDHVTC 302
Query: 302 SIMITVMRKIGRSAKDSWDYFEKMNEKGVKWSPEVLGALIKAFCDEGLKSQALIIQLEME 361
SIMIT+MRK GRSAK++W++FEKMN KGVKWSPE+LGAL+K+FCDEGLK++ALIIQ+EM
Sbjct: 303 SIMITMMRKNGRSAKEAWEFFEKMNRKGVKWSPEILGALVKSFCDEGLKNEALIIQVEMA 362
Query: 362 KKGVTSNAIVYNTIMDAFSKSNQIEEAEGLFAEMKAKGVKPTSATFNILMDAYSRRMQPE 421
KKG SNAIVYNT+MDA++KSNQIEE EG+FAEMKAKG+KPTSATFNILMDAYSRRMQPE
Sbjct: 363 KKGAFSNAIVYNTLMDAYNKSNQIEEVEGIFAEMKAKGLKPTSATFNILMDAYSRRMQPE 422
Query: 422 IVEKLLIEMKDTGFEPNVKSYTCLISAYGRKKTMSDMAADAFLRMKKNGIKPNSHSYTAL 481
IVE+LL+EM+D G +P+ KSYTCLISAYGR+ M+DMAA+AFLRMKK GIKP SHSYTAL
Sbjct: 423 IVEELLLEMQDAGLQPDAKSYTCLISAYGRQNKMTDMAANAFLRMKKVGIKPTSHSYTAL 482
Query: 482 IHAYSVSGWHEKAYSTFENMLQEGLKPSIETYTTLLDAFRRAGDTEALMKIWKLMIREKV 541
IHAYSVSGWHEKAYSTFENM EG+KPSIETYT LLDAFRR+GDT+ LM+IWK+M+ EKV
Sbjct: 483 IHAYSVSGWHEKAYSTFENMQTEGIKPSIETYTALLDAFRRSGDTQTLMRIWKMMMSEKV 542
Query: 542 AGTRVTFNILLDGFAKQGHYIEARDVISEFSKTGLQPTIMTYNMLMNAYARGGQHLKMPQ 601
GTRVTFNILLDGFAKQGHY+EARDVISEF K GL PT+MTYNMLMNAYARGGQH K+PQ
Sbjct: 543 EGTRVTFNILLDGFAKQGHYVEARDVISEFGKLGLHPTVMTYNMLMNAYARGGQHSKLPQ 602
Query: 602 LLQEMAARELKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMVKSGQVPDVKSYQKLRSILD 661
LL+EMA LKPDS+TY TMIYA++RVRDF+RAFFYHK MVKSGQVPD KSY+KLR+IL+
Sbjct: 603 LLKEMATLNLKPDSITYLTMIYAYIRVRDFRRAFFYHKTMVKSGQVPDAKSYEKLRAILE 662
Query: 662 AKLDTKNRKDKSAILGIMNSKLGMVKAKKKGKKDEFWKNKRKYVKTLRIS 712
AK KNRKD+SAILGI+NSK+GM+KAKKKGKKDEFWKNK+++ + ++
Sbjct: 663 AKSKIKNRKDRSAILGIINSKMGMLKAKKKGKKDEFWKNKKRHPRMYNVA 710
BLAST of CmoCh13G008010 vs. TAIR10
Match:
AT5G50280.1 (AT5G50280.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 842.0 bits (2174), Expect = 2.7e-244
Identity = 445/723 (61.55%), Postives = 539/723 (74.55%), Query Frame = 1
Query: 3 LVHQHHLPQSFQSIRKANLKQSTSNSCLFFQFSTRKLAGCLCATSPNPISQSPSPIFLPF 62
L H+ H P + +R + ++ S L ATSP+ S SPS IFL
Sbjct: 19 LSHRLHFPVPYLLLRSSFFRKPLS----------------LSATSPSSSSSSPS-IFLSC 78
Query: 63 LEE---------------EEEEEEEEEDEEEHKEVLGGNTTEDWNDPLVRFFKSRTST-- 122
++ EE E EEED+EE +D+ DP+++FFKSRT T
Sbjct: 79 FDDALPDKIQQPENSTINSEESECEEEDDEEG---------DDFTDPILKFFKSRTLTSE 138
Query: 123 -TQDPLPESKLSLQKNRRSSWHLASDVECSVEAEIAPGEDKKQSGLVSRNSRAL------ 182
T DP ESK SLQKNRR+SWHLA D E EI E K + + N + L
Sbjct: 139 STADPARESKFSLQKNRRTSWHLAPDF-ADPETEI---ESKPEESVFVTNQQTLGVHIPF 198
Query: 183 PDGVVGDIVRTARNLPQNTTLGEALGDFEGKIDEKECLEVLRLLGEENLVVCCLYFFEWM 242
GV +I+ A+NL +N TLGE L FE ++ + EC+E L ++GE V CLYF+EWM
Sbjct: 199 ESGVAREILELAKNLKENQTLGEMLSGFERRVSDTECVEALVMMGESGFVKSCLYFYEWM 258
Query: 243 GLQEPSLVTPRAYSILFPLLGRAGMGDKIMVLFKNIPLKKELQDVHVYNSAMSGLMVCKR 302
LQEPSL +PRA S+LF LLGR M D I++L N+P K+E +DV +YN+A+SGL +R
Sbjct: 259 SLQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQR 318
Query: 303 YNDACEVYAAMETNKVNPDHVTCSIMITVMRKIGRSAKDSWDYFEKMNEKGVKWSPEVLG 362
Y+DA EVY AM+ V PD+VTC+I+IT +RK GRSAK+ W+ FEKM+EKGVKWS +V G
Sbjct: 319 YDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFG 378
Query: 363 ALIKAFCDEGLKSQALIIQLEMEKKGVTSNAIVYNTIMDAFSKSNQIEEAEGLFAEMKAK 422
L+K+FCDEGLK +AL+IQ EMEKKG+ SN IVYNT+MDA++KSN IEE EGLF EM+ K
Sbjct: 379 GLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDK 438
Query: 423 GVKPTSATFNILMDAYSRRMQPEIVEKLLIEMKDTGFEPNVKSYTCLISAYGRKKTMSDM 482
G+KP++AT+NILMDAY+RRMQP+IVE LL EM+D G EPNVKSYTCLISAYGR K MSDM
Sbjct: 439 GLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDM 498
Query: 483 AADAFLRMKKNGIKPNSHSYTALIHAYSVSGWHEKAYSTFENMLQEGLKPSIETYTTLLD 542
AADAFLRMKK G+KP+SHSYTALIHAYSVSGWHEKAY++FE M +EG+KPS+ETYT++LD
Sbjct: 499 AADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLD 558
Query: 543 AFRRAGDTEALMKIWKLMIREKVAGTRVTFNILLDGFAKQGHYIEARDVISEFSKTGLQP 602
AFRR+GDT LM+IWKLM+REK+ GTR+T+N LLDGFAKQG YIEARDV+SEFSK GLQP
Sbjct: 559 AFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQP 618
Query: 603 TIMTYNMLMNAYARGGQHLKMPQLLQEMAARELKPDSVTYSTMIYAFVRVRDFKRAFFYH 662
++MTYNMLMNAYARGGQ K+PQLL+EMAA LKPDS+TYSTMIYAFVRVRDFKRAFFYH
Sbjct: 619 SVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYH 678
Query: 663 KKMVKSGQVPDVKSYQKLRSILDAKLDTKNRKDKSAILGIMNSKLGMVKAKKKGKKDEFW 702
K MVKSGQVPD +SY+KLR+IL+ K TKNRKDK+AILGI+NSK G VKAK KGKKDEFW
Sbjct: 679 KMMVKSGQVPDPRSYEKLRAILEDKAKTKNRKDKTAILGIINSKFGRVKAKTKGKKDEFW 711
BLAST of CmoCh13G008010 vs. TAIR10
Match:
AT5G02860.1 (AT5G02860.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 183.3 bits (464), Expect = 5.2e-46
Identity = 124/459 (27.02%), Postives = 212/459 (46.19%), Query Frame = 1
Query: 176 NTTLGEALGDFEGKIDE--KECLEVLRLLGEENLVVCCLYFFEWMGLQEP--SLVTPRAY 235
++ L E F+ K + E L L+ LG L F+W Q+ S++
Sbjct: 117 DSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVV 176
Query: 236 SILFPLLGRAGMGDKIMVLFKNIPLKKELQDVHVYNSAMSGLMVCKRYNDACEVYAAMET 295
+I+ +LG+ G +F + DV+ Y S +S RY +A V+ ME
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236
Query: 296 NKVNPDHVTCSIMITVMRKIGRSAKDSWDYFEKMNEKGVKWSPEVLGALIKAFCDEGLKS 355
+ P +T ++++ V K+G EKM G+ LI L
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 356 QALIIQLEMEKKGVTSNAIVYNTIMDAFSKSNQIEEAEGLFAEMKAKGVKPTSATFNILM 415
+A + EM+ G + + + YN ++D + KS++ +EA + EM G P+ T+N L+
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 416 DAYSRRMQPEIVEKLLIEMKDTGFEPNVKSYTCLISAYGRKKTMSDMAADAFLRMKKNGI 475
AY+R + +L +M + G +P+V +YT L+S + R + + A F M+ G
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV-ESAMSIFEEMRNAGC 416
Query: 476 KPNSHSYTALIHAYSVSGWHEKAYSTFENMLQEGLKPSIETYTTLLDAFRRAGDTEALMK 535
KPN ++ A I Y G + F+ + GL P I T+ TLL F + G +
Sbjct: 417 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 476
Query: 536 IWKLMIREKVAGTRVTFNILLDGFAKQGHYIEARDVISEFSKTGLQPTIMTYNMLMNAYA 595
++K M R R TFN L+ +++ G + +A V G+ P + TYN ++ A A
Sbjct: 477 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 536
Query: 596 RGGQHLKMPQLLQEMAARELKPDSVTYSTMIYAFVRVRD 631
RGG + ++L EM KP+ +TY ++++A+ ++
Sbjct: 537 RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE 574
BLAST of CmoCh13G008010 vs. TAIR10
Match:
AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 172.9 bits (437), Expect = 7.0e-43
Identity = 114/410 (27.80%), Postives = 195/410 (47.56%), Query Frame = 1
Query: 250 LFKNIPLKKELQDVHVYNSAMSGLMVCKRYNDACEVYAAMETNKVNPDHVTCSIMITVMR 309
+FK + + +V YN + G + A ++ MET P+ VT + +I
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 310 KIGRSAKDSWDYFEKMNEKGVKWSPEVLGALIKAFCDEGLKSQALIIQLEMEKKGVTSNA 369
K+ R D + M KG++ + +I C EG + + EM ++G + +
Sbjct: 252 KL-RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 311
Query: 370 IVYNTIMDAFSKSNQIEEAEGLFAEMKAKGVKPTSATFNILMDAYSRRMQPEIVEKLLIE 429
+ YNT++ + K +A + AEM G+ P+ T+ L+ + + + L +
Sbjct: 312 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 371
Query: 430 MKDTGFEPNVKSYTCLISAYGRKKTMSDMAADAFLRMKKNGIKPNSHSYTALIHAYSVSG 489
M+ G PN ++YT L+ + +K M++ A M NG P+ +Y ALI+ + V+G
Sbjct: 372 MRVRGLCPNERTYTTLVDGFSQKGYMNE-AYRVLREMNDNGFSPSVVTYNALINGHCVTG 431
Query: 490 WHEKAYSTFENMLQEGLKPSIETYTTLLDAFRRAGDTEALMKIWKLMIREKVAGTRVTFN 549
E A + E+M ++GL P + +Y+T+L F R+ D + +++ + M+ + + +T++
Sbjct: 432 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 491
Query: 550 ILLDGFAKQGHYIEARDVISEFSKTGLQPTIMTYNMLMNAYARGGQHLKMPQLLQEMAAR 609
L+ GF +Q EA D+ E + GL P TY L+NAY G K QL EM +
Sbjct: 492 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 551
Query: 610 ELKPDSVTYSTMIYAF---VRVRDFKRAFFYHKKMVKSGQVPDVKSYQKL 657
+ PD VTYS +I R R+ KR K+ VP +Y L
Sbjct: 552 GVLPDVVTYSVLINGLNKQSRTREAKRLLL---KLFYEESVPSDVTYHTL 596
BLAST of CmoCh13G008010 vs. TAIR10
Match:
AT2G18940.1 (AT2G18940.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 171.8 bits (434), Expect = 1.6e-42
Identity = 117/475 (24.63%), Postives = 223/475 (46.95%), Query Frame = 1
Query: 189 KIDEKECLEVLRLLGEENLVVCCLYFFEWMGLQEPSLVTPRAYSILFPLLGRAGMGDKIM 248
K+D + +R+LG E+ + + LQE L+ RAY+ + R G +K +
Sbjct: 172 KLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQE-YLLDVRAYTTILHAYSRTGKYEKAI 231
Query: 249 VLFKNIPLKKELQDVHVYNSAMSGL-MVCKRYNDACEVYAAMETNKVNPDHVTCSIMITV 308
LF+ + + YN + + + + V M + + D TCS +++
Sbjct: 232 DLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSA 291
Query: 309 MRKIGRSAKDSWDYFEKMNEKGVKWSPEVLGALIKAFCDEGLKSQALIIQLEMEKKGVTS 368
+ G +++ ++F ++ G + AL++ F G+ ++AL + EME+ +
Sbjct: 292 CAREGL-LREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPA 351
Query: 369 NAIVYNTIMDAFSKSNQIEEAEGLFAEMKAKGVKPTSATFNILMDAYSRRMQPEIVEKLL 428
+++ YN ++ A+ ++ +EA G+ M KGV P + T+ ++DAY + + + KL
Sbjct: 352 DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF 411
Query: 429 IEMKDTGFEPNVKSYTCLISAYGRKKTMSDMAADAFLRMKKNGIKPNSHSYTALIHAYSV 488
MK+ G PN +Y ++S G+K ++M MK NG PN ++ ++
Sbjct: 412 YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEM-IKMLCDMKSNGCSPNRATWNTMLALCGN 471
Query: 489 SGWHEKAYSTFENMLQEGLKPSIETYTTLLDAFRRAGDTEALMKIWKLMIREKVAGTRVT 548
G + F M G +P +T+ TL+ A+ R G K++ M R T
Sbjct: 472 KGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTT 531
Query: 549 FNILLDGFAKQGHYIEARDVISEFSKTGLQPTIMTYNMLMNAYARGGQHLKMPQLLQEMA 608
+N LL+ A++G + +VIS+ G +PT +Y++++ YA+GG +L + ++ +
Sbjct: 532 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 591
Query: 609 ARELKPDSVTYSTMIYAFVRVRDF---KRAFFYHKKMVKSGQVPDVKSYQKLRSI 660
++ P + T++ A + R +RAF K K G PD+ + + SI
Sbjct: 592 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK---KHGYKPDMVIFNSMLSI 640
BLAST of CmoCh13G008010 vs. TAIR10
Match:
AT1G74850.1 (AT1G74850.1 plastid transcriptionally active 2)
HSP 1 Score: 170.6 bits (431), Expect = 3.5e-42
Identity = 111/497 (22.33%), Postives = 229/497 (46.08%), Query Frame = 1
Query: 163 VGDIVRTARNLPQNTTLGEALGDFEGKIDEKECLEVLRLLGEENLVVCCLYFFEWMGLQE 222
V ++ +LP ++ L F+ K+ + V + L F++M Q
Sbjct: 76 VESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQI 135
Query: 223 PSLVTPRAYSILFPLLGRAGMGDKIMVLFKNIPLKKELQDVHVYNSAMSGLMVCKRYNDA 282
Y+I+ LLGR G+ DK + +F +P + + V Y + ++ RY +
Sbjct: 136 WCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETS 195
Query: 283 CEVYAAMETNKVNPDHVTCSIMITVMRKIGRSAKDSWDYFEKMNEKGVKWSPEVLGALIK 342
E+ M+ K++P +T + +I + G + F +M +G++ L+
Sbjct: 196 LELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLS 255
Query: 343 AFCDEGLKSQALIIQLEMEKKGVTSNAIVYNTIMDAFSKSNQIEEAEGLFAEMKAKGVKP 402
A GL +A ++ M G+ + Y+ +++ F K ++E+ L EM + G P
Sbjct: 256 ACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP 315
Query: 403 TSATFNILMDAYSRRMQPEIVEKLLIEMKDTGFEPNVKSYTCLISAYGRKKTMSDMAADA 462
++N+L++AY++ + + +M+ G PN +Y+ L++ +G+ D+
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDV-RQL 375
Query: 463 FLRMKKNGIKPNSHSYTALIHAYSVSGWHEKAYSTFENMLQEGLKPSIETYTTLLDAFRR 522
FL MK + P++ +Y LI + G+ ++ + F +M++E ++P +ETY ++ A +
Sbjct: 376 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 435
Query: 523 AGDTEALMKIWKLMIREKVAGTRVTFNILLDGFAKQGHYIEARDVISEFSKTGLQPTIMT 582
G E KI + M + + + +++ F + Y EA + + G P+I T
Sbjct: 436 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 495
Query: 583 YNMLMNAYARGGQHLKMPQLLQEMAARELKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMV 642
++ L+ ++ARGG + +L + + + T++ I A+ + F+ A + M
Sbjct: 496 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 555
Query: 643 KSGQVPDVKSYQKLRSI 660
KS PD ++ + + S+
Sbjct: 556 KSRCDPDERTLEAVLSV 571
BLAST of CmoCh13G008010 vs. NCBI nr
Match:
gi|659067377|ref|XP_008439140.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g50280, chloroplastic [Cucumis melo])
HSP 1 Score: 1205.3 bits (3117), Expect = 0.0e+00
Identity = 615/711 (86.50%), Postives = 654/711 (91.98%), Query Frame = 1
Query: 1 MALVHQHHLPQSFQSIRKANLKQSTSNSCLFFQFSTRKLAGCLCATSPNPISQSPSPIFL 60
MALVHQHHL F SI KANLKQ+TSNSC FFQ +T+KLA CLCA SPNP +QSPSPIFL
Sbjct: 1 MALVHQHHLTFPFLSIGKANLKQNTSNSCSFFQSNTQKLACCLCAASPNPTTQSPSPIFL 60
Query: 61 PFLEEEEEEEEEEEDEEEH---KEVLGGNTTE-DWNDPLVRFFKSRTSTTQDPLPESKLS 120
FL+EEEEEEEEEE EEE KEV GGN TE DWNDPL RFFKSRTSTTQDP ESKLS
Sbjct: 61 HFLQEEEEEEEEEEVEEEEVPSKEVHGGNKTEEDWNDPLFRFFKSRTSTTQDPSRESKLS 120
Query: 121 LQKNRRSSWHLASDVECSVEAEIAPGEDKKQSGLVSRNSRALPDGVVGDIVRTARNLPQN 180
LQKNRRSSWHLASDVE EAE+ EDK+Q G SRNSR LPDG+VG+IV ARNL QN
Sbjct: 121 LQKNRRSSWHLASDVEFFNEAEVTLEEDKEQLGSASRNSRVLPDGLVGEIVGIARNLSQN 180
Query: 181 TTLGEALGDFEGKIDEKECLEVLRLLGEENLVVCCLYFFEWMGLQEPSLVTPRAYSILFP 240
TLGEALG+FEG+I EKECLEVLRLLGEENLVVCCLYFFEWMGLQE SLVT RAYS+LFP
Sbjct: 181 MTLGEALGEFEGRISEKECLEVLRLLGEENLVVCCLYFFEWMGLQETSLVTSRAYSLLFP 240
Query: 241 LLGRAGMGDKIMVLFKNIPLKKELQDVHVYNSAMSGLMVCKRYNDACEVYAAMETNKVNP 300
LLGRAGMG+KIMVLFKN+PL+KE QDVHVYNSAMSGLMVCKRY+DAC+VY AMETN VNP
Sbjct: 241 LLGRAGMGEKIMVLFKNLPLRKEFQDVHVYNSAMSGLMVCKRYDDACKVYEAMETNNVNP 300
Query: 301 DHVTCSIMITVMRKIGRSAKDSWDYFEKMNEKGVKWSPEVLGALIKAFCDEGLKSQALII 360
DHVTCSIMITVMRKIGRSAKDSWDYFEKMN+KGVKWS EVLGALIK+FCDEGLKSQALII
Sbjct: 301 DHVTCSIMITVMRKIGRSAKDSWDYFEKMNQKGVKWSSEVLGALIKSFCDEGLKSQALII 360
Query: 361 QLEMEKKGVTSNAIVYNTIMDAFSKSNQIEEAEGLFAEMKAKGVKPTSATFNILMDAYSR 420
QLEMEKKGV SN I+YNTIMDAFSKSNQIEEAEG+FAEMK+KGVKPTSA+FNILM+AYSR
Sbjct: 361 QLEMEKKGVASNVIMYNTIMDAFSKSNQIEEAEGVFAEMKSKGVKPTSASFNILMNAYSR 420
Query: 421 RMQPEIVEKLLIEMKDTGFEPNVKSYTCLISAYGRKKTMSDMAADAFLRMKKNGIKPNSH 480
RMQPEIVEKLL+EMKD G EPNVKSYTCLISAYGR+K MSDMAADAFLRMKKNGI+P SH
Sbjct: 421 RMQPEIVEKLLVEMKDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKNGIRPTSH 480
Query: 481 SYTALIHAYSVSGWHEKAYSTFENMLQEGLKPSIETYTTLLDAFRRAGDTEALMKIWKLM 540
SYTALIHAYSVSGWHEKAYS FENML+EGLKPSIETYTTLLDAFRRAGDT +LMKIWKLM
Sbjct: 481 SYTALIHAYSVSGWHEKAYSIFENMLREGLKPSIETYTTLLDAFRRAGDTVSLMKIWKLM 540
Query: 541 IREKVAGTRVTFNILLDGFAKQGHYIEARDVISEFSKTGLQPTIMTYNMLMNAYARGGQH 600
IREK+ GTRVTFNILLDGFAKQGHY+EARDVISEF K GLQPT+MTYNMLMNAYARGGQH
Sbjct: 541 IREKIVGTRVTFNILLDGFAKQGHYVEARDVISEFDKIGLQPTVMTYNMLMNAYARGGQH 600
Query: 601 LKMPQLLQEMAARELKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMVKSGQVPDVKSYQKL 660
LKMPQLLQEMAARELKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMVKSGQVPDVKSYQKL
Sbjct: 601 LKMPQLLQEMAARELKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMVKSGQVPDVKSYQKL 660
Query: 661 RSILDAKLDTKNRKDKSAILGIMNSKLGMVKAKKKGKKDEFWKNKRKYVKT 708
+SILD KL TKNRKDKSAILGI+NSK+GMVKAK+KGKKDEFWK KR++V+T
Sbjct: 661 KSILDVKLATKNRKDKSAILGIINSKMGMVKAKQKGKKDEFWKTKRRHVRT 711
BLAST of CmoCh13G008010 vs. NCBI nr
Match:
gi|778657971|ref|XP_004152584.2| (PREDICTED: pentatricopeptide repeat-containing protein At5g50280, chloroplastic [Cucumis sativus])
HSP 1 Score: 1164.8 bits (3012), Expect = 0.0e+00
Identity = 597/708 (84.32%), Postives = 637/708 (89.97%), Query Frame = 1
Query: 1 MALVHQHHLPQSFQSIRKANLKQSTSNSCLFFQFSTRKLAGCLCATSPNPISQSPSPIFL 60
MALV QHHL F SI ANLKQ+TSNS FFQ +T+KLA CLCA SPNP +QSPSPIFL
Sbjct: 1 MALVQQHHLTYPFLSIAGANLKQNTSNSFSFFQSNTQKLACCLCAASPNPSTQSPSPIFL 60
Query: 61 PFLEEEEEEEEEEEDEEEHKEVLGGNTTE-DWNDPLVRFFKSRTSTTQDPLPESKLSLQK 120
EEEEEEEEEE KE GGN TE DWNDPL RFFKS+TSTTQDP ESKL LQK
Sbjct: 61 HLFEEEEEEEEEEVPS---KEGHGGNKTEEDWNDPLFRFFKSQTSTTQDPSRESKLPLQK 120
Query: 121 NRRSSWHLASDVECSVEAEIAPGEDKKQSGLVSRNSRALPDGVVGDIVRTARNLPQNTTL 180
NRRSSWHLASDVE EAE+ EDK+Q SRNSR LP G VG+IV ARNL QN TL
Sbjct: 121 NRRSSWHLASDVEFFNEAEVTLEEDKEQLRSASRNSRVLPGGPVGEIVGIARNLSQNMTL 180
Query: 181 GEALGDFEGKIDEKECLEVLRLLGEENLVVCCLYFFEWMGLQEPSLVTPRAYSILFPLLG 240
GEALG+FEG+I EKEC EVLRLLGEENLVVCCLYFFEWMGLQE SLVT RAYS+LFPLLG
Sbjct: 181 GEALGEFEGRISEKECWEVLRLLGEENLVVCCLYFFEWMGLQETSLVTSRAYSLLFPLLG 240
Query: 241 RAGMGDKIMVLFKNIPLKKELQDVHVYNSAMSGLMVCKRYNDACEVYAAMETNKVNPDHV 300
RAGMG+KIMVLFKN+PLKKE QDVHVYNSA+SGLMVCKRY+DAC+VY AMETN VNPDHV
Sbjct: 241 RAGMGEKIMVLFKNLPLKKEFQDVHVYNSAISGLMVCKRYDDACKVYEAMETNNVNPDHV 300
Query: 301 TCSIMITVMRKIGRSAKDSWDYFEKMNEKGVKWSPEVLGALIKAFCDEGLKSQALIIQLE 360
TCSIMITVMRKIGRSAKDSWDYFEKMN+KGVKWS EVLGALIK+FCDEGLKSQALI+QLE
Sbjct: 301 TCSIMITVMRKIGRSAKDSWDYFEKMNQKGVKWSSEVLGALIKSFCDEGLKSQALILQLE 360
Query: 361 MEKKGVTSNAIVYNTIMDAFSKSNQIEEAEGLFAEMKAKGVKPTSATFNILMDAYSRRMQ 420
MEKKGV SN I+YNTIMDAFSKSNQIEEAEG+FAEMK+KGVKPTSA+FNILM+AYSRRMQ
Sbjct: 361 MEKKGVASNVIMYNTIMDAFSKSNQIEEAEGVFAEMKSKGVKPTSASFNILMNAYSRRMQ 420
Query: 421 PEIVEKLLIEMKDTGFEPNVKSYTCLISAYGRKKTMSDMAADAFLRMKKNGIKPNSHSYT 480
PEIVEKLL+EMKD G EPNVKSYTCLISAYGR+K MSDMAADAFLRMKKNGI+P SHSYT
Sbjct: 421 PEIVEKLLVEMKDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKNGIRPTSHSYT 480
Query: 481 ALIHAYSVSGWHEKAYSTFENMLQEGLKPSIETYTTLLDAFRRAGDTEALMKIWKLMIRE 540
ALIHAYSVSGWHEKAYS FENML+EGLKPSIETYTTLLDAFRRAGDT +LMKIWKLMIRE
Sbjct: 481 ALIHAYSVSGWHEKAYSAFENMLREGLKPSIETYTTLLDAFRRAGDTVSLMKIWKLMIRE 540
Query: 541 KVAGTRVTFNILLDGFAKQGHYIEARDVISEFSKTGLQPTIMTYNMLMNAYARGGQHLKM 600
KV GTRVTFN LLDGFAK GHY+EARDVISEF K GLQPT+MTYNMLMNAYARGGQHLK+
Sbjct: 541 KVLGTRVTFNTLLDGFAKHGHYVEARDVISEFDKIGLQPTVMTYNMLMNAYARGGQHLKL 600
Query: 601 PQLLQEMAARELKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMVKSGQVPDVKSYQKLRSI 660
PQLLQEMAAR+LKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMVKSGQVPDVKSYQKL+SI
Sbjct: 601 PQLLQEMAARDLKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMVKSGQVPDVKSYQKLKSI 660
Query: 661 LDAKLDTKNRKDKSAILGIMNSKLGMVKAKKKGKKDEFWKNKRKYVKT 708
LD KL TKNRKDKSAILGI+NSK+GMVKAKK+GKKDEFWK KR++V+T
Sbjct: 661 LDVKLATKNRKDKSAILGIINSKMGMVKAKKQGKKDEFWKTKRRHVRT 705
BLAST of CmoCh13G008010 vs. NCBI nr
Match:
gi|470130284|ref|XP_004301033.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g50280, chloroplastic [Fragaria vesca subsp. vesca])
HSP 1 Score: 967.6 bits (2500), Expect = 1.2e-278
Identity = 496/682 (72.73%), Postives = 570/682 (83.58%), Query Frame = 1
Query: 29 CLFFQFSTRKLAGCLCATSPNPISQSPSPIFLPFLEEEEEEEEEEEDEEEHKEVLGGNTT 88
CLF T +L L + P P S S S IFLPFLEEEEE+ EEEE E +
Sbjct: 30 CLFGLSKTLRLFS-LYSAPPIPTSNSSSSIFLPFLEEEEEDHEEEEGLES----VADEKE 89
Query: 89 EDWNDPLVRFFKSRTSTTQDPLPESKLSLQKNRRSSWHLASDVECSVE---AEIAPGEDK 148
ED +DP+ RFFKSRTST QDP E KLSLQKNRRSSWHLA D++ S + P +
Sbjct: 90 EDPDDPIARFFKSRTST-QDPQREGKLSLQKNRRSSWHLADDLDDSEPDSGVDPVPEVQE 149
Query: 149 KQSGLVSRNSRALPDGVVGDIVRTARNLPQNTTLGEALGDFEGKIDEKECLEVLRLLGEE 208
+Q G VS +S L DG+VG I++ ARNL QN TLGE LG FEG++ EKEC+EVL L+GEE
Sbjct: 150 QQLGPVSSDSIPLADGIVGQILQKARNLGQNLTLGEELGGFEGRVGEKECVEVLELMGEE 209
Query: 209 NLVVCCLYFFEWMGLQEPSLVTPRAYSILFPLLGRAGMGDKIMVLFKNIPLKKELQDVHV 268
L++ CLYFFEWMGLQEP LVTPRA S+LFP+LGRAGMGDK++VLFKN+P KE +DVHV
Sbjct: 210 GLLMGCLYFFEWMGLQEPCLVTPRACSVLFPILGRAGMGDKLVVLFKNLP-GKEFRDVHV 269
Query: 269 YNSAMSGLMVCKRYNDACEVYAAMETNKVNPDHVTCSIMITVMRKIGRSAKDSWDYFEKM 328
YN+A+SGLM KRY+DA +VY ME N + PDHVTCSIMIT+MRKIGRSAKDSWD+FE+M
Sbjct: 270 YNAAISGLMCSKRYDDAWKVYETMEANNILPDHVTCSIMITIMRKIGRSAKDSWDFFERM 329
Query: 329 NEKGVKWSPEVLGALIKAFCDEGLKSQALIIQLEMEKKGVTSNAIVYNTIMDAFSKSNQI 388
N KGVKWS EVLGALIK+FCDEGLKS+ALIIQ+EMEKKG++SNAIVYNT+M AF SN++
Sbjct: 330 NRKGVKWSQEVLGALIKSFCDEGLKSEALIIQIEMEKKGISSNAIVYNTLMTAFCDSNRV 389
Query: 389 EEAEGLFAEMKAKGVKPTSATFNILMDAYSRRMQPEIVEKLLIEMKDTGFEPNVKSYTCL 448
EEAEGLF EMK++G+KPTS TFNILMDAYSRRMQPEIVEKLL+EM++ G +PNVKSYTCL
Sbjct: 390 EEAEGLFTEMKSRGIKPTSPTFNILMDAYSRRMQPEIVEKLLVEMQEMGLDPNVKSYTCL 449
Query: 449 ISAYGRKKTMSDMAADAFLRMKKNGIKPNSHSYTALIHAYSVSGWHEKAYSTFENMLQEG 508
+SAYGR+K MSDMAADAFLRMKK GI P SH+YTALIHAYSVSGWHEKAY FENM +EG
Sbjct: 450 VSAYGRQKNMSDMAADAFLRMKKVGICPTSHTYTALIHAYSVSGWHEKAYIAFENMKREG 509
Query: 509 LKPSIETYTTLLDAFRRAGDTEALMKIWKLMIREKVAGTRVTFNILLDGFAKQGHYIEAR 568
LKPSIETYT LLDAFRRAGDTE LM+IWKLMI+EKV GT+VTFN LLDGF+KQGHY+EAR
Sbjct: 510 LKPSIETYTALLDAFRRAGDTEMLMRIWKLMIKEKVQGTKVTFNTLLDGFSKQGHYLEAR 569
Query: 569 DVISEFSKTGLQPTIMTYNMLMNAYARGGQHLKMPQLLQEMAARELKPDSVTYSTMIYAF 628
DV+SEF GLQPT+MTYNMLMNAYARGGQH K+PQLL+EM LKPDSVTYSTMIYA+
Sbjct: 570 DVVSEFGNMGLQPTVMTYNMLMNAYARGGQHSKLPQLLKEMEVLNLKPDSVTYSTMIYAY 629
Query: 629 VRVRDFKRAFFYHKKMVKSGQVPDVKSYQKLRSILDAKLDTKNRKDKSAILGIMNSKLGM 688
+RVRDF RAFFYHKKMVKSGQVPD +SY+KLR+ILD KL KN+KDKSAILGI+NSK+GM
Sbjct: 630 IRVRDFSRAFFYHKKMVKSGQVPDARSYEKLRAILDVKLAKKNKKDKSAILGIINSKMGM 689
Query: 689 VKAKKKGKKDEFWKNKRK-YVK 707
+K KKKGKKDEFWKNK+K YV+
Sbjct: 690 LKIKKKGKKDEFWKNKKKRYVR 704
BLAST of CmoCh13G008010 vs. NCBI nr
Match:
gi|657965383|ref|XP_008374346.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g50280, chloroplastic [Malus domestica])
HSP 1 Score: 965.3 bits (2494), Expect = 5.9e-278
Identity = 496/717 (69.18%), Postives = 579/717 (80.75%), Query Frame = 1
Query: 1 MALV-HQHHLPQSFQSIRKANLKQSTSNSCLFFQFSTRKLAGCLCATSPNPISQSPSPIF 60
MAL+ HQ P S S R F FS L + P P S S +PIF
Sbjct: 1 MALIRHQLSRPPSLPSSRSHPPPNHHFPKPCLFVFSKNLRLFSLYSAPPTPSSLSSAPIF 60
Query: 61 LPFLEEEEEEEEEEEDEEEHKEVL---GGNTTEDWNDPLVRFFKSRTSTTQDPLPESKLS 120
LPFL+ +EEE+E+E +EE + ED +DP++RFFKSRTST QDP E K S
Sbjct: 61 LPFLQNQEEEDEDETEEETEEPPALEEDEEEEEDPDDPILRFFKSRTST-QDPEREGKFS 120
Query: 121 LQKNRRSSWHLASDVECSVEAEIAPGEDK-----KQSGLVSRNSRALPDGVVGDIVRTAR 180
LQKNRRS+W LA + E+E G K KQ G + S A P+G+V +I++ AR
Sbjct: 121 LQKNRRSAWRLADGTHLADESEPETGVKKLLGEQKQVGPIKFGSNASPEGIVQEILQKAR 180
Query: 181 NLPQNTTLGEALGDFEGKIDEKECLEVLRLLGEENLVVCCLYFFEWMGLQEPSLVTPRAY 240
LPQN TLGEALG FEG++ EKEC+++L ++GEE L+V CLYFFEWMGLQEPSLVTPRA
Sbjct: 181 TLPQNLTLGEALGGFEGRVGEKECVKILEVMGEEGLLVGCLYFFEWMGLQEPSLVTPRAC 240
Query: 241 SILFPLLGRAGMGDKIMVLFKNIPLKKELQDVHVYNSAMSGLMVCKRYNDACEVYAAMET 300
S+LFP+LGRAGMGDK+M+LF+N+P KKE DVHVYN+A+SGLM KRY+DA +VY ME
Sbjct: 241 SVLFPMLGRAGMGDKLMILFRNLPAKKEFWDVHVYNAAISGLMCSKRYDDAWKVYETMEA 300
Query: 301 NKVNPDHVTCSIMITVMRKIGRSAKDSWDYFEKMNEKGVKWSPEVLGALIKAFCDEGLKS 360
N PDHVTCSIMITVMRK+GRSAKDSW +FE+MN KGV+WS EVLGALIK+FCDEGLK
Sbjct: 301 NNTLPDHVTCSIMITVMRKVGRSAKDSWQFFERMNRKGVRWSQEVLGALIKSFCDEGLKR 360
Query: 361 QALIIQLEMEKKGVTSNAIVYNTIMDAFSKSNQIEEAEGLFAEMKAKGVKPTSATFNILM 420
+ALIIQ+EMEKKGV+SNAIVYNT+MDAF SNQ+EEAEGLFAEMK+KG+KPT+ATFN+LM
Sbjct: 361 EALIIQVEMEKKGVSSNAIVYNTLMDAFCNSNQVEEAEGLFAEMKSKGIKPTAATFNVLM 420
Query: 421 DAYSRRMQPEIVEKLLIEMKDTGFEPNVKSYTCLISAYGRKKTMSDMAADAFLRMKKNGI 480
AYSR+M+PEIVEKLL+EM D G +PNVKSYTCLISAYGR+K MSDMAADAFLRMKK GI
Sbjct: 421 SAYSRKMEPEIVEKLLVEMXDMGLKPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGI 480
Query: 481 KPNSHSYTALIHAYSVSGWHEKAYSTFENMLQEGLKPSIETYTTLLDAFRRAGDTEALMK 540
+P SHSYTALIHA+SVSGWHEKAY FENM +EGLKPSIETYT LLDAFRRAGD + LMK
Sbjct: 481 RPTSHSYTALIHAFSVSGWHEKAYIAFENMQKEGLKPSIETYTALLDAFRRAGDAQMLMK 540
Query: 541 IWKLMIREKVAGTRVTFNILLDGFAKQGHYIEARDVISEFSKTGLQPTIMTYNMLMNAYA 600
IWKLMI+EK+ GT+VT+N LLDGFAKQGHY+EARDVISEF GLQPT+MTYNMLMNAYA
Sbjct: 541 IWKLMIKEKIVGTKVTYNTLLDGFAKQGHYVEARDVISEFGNVGLQPTVMTYNMLMNAYA 600
Query: 601 RGGQHLKMPQLLQEMAARELKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMVKSGQVPDVK 660
RGGQH K+PQLL+EMAA +LKPDSVTYSTMIYA+VRVRDF+RAFFYHK+MVK+GQVPD +
Sbjct: 601 RGGQHSKLPQLLKEMAALKLKPDSVTYSTMIYAYVRVRDFRRAFFYHKQMVKNGQVPDAR 660
Query: 661 SYQKLRSILDAKLDTKNRKDKSAILGIMNSKLGMVKAKKKGKKDEFWKNKRK-YVKT 708
SY+KLRSILD K KN+KDKSAILGI+NSK+G++K KKKGKKDEFWKNK K YV+T
Sbjct: 661 SYEKLRSILDVKAARKNKKDKSAILGIINSKMGLLKVKKKGKKDEFWKNKNKRYVRT 716
BLAST of CmoCh13G008010 vs. NCBI nr
Match:
gi|645268105|ref|XP_008239377.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g50280, chloroplastic [Prunus mume])
HSP 1 Score: 958.0 bits (2475), Expect = 9.5e-276
Identity = 497/721 (68.93%), Postives = 587/721 (81.41%), Query Frame = 1
Query: 1 MALVHQH-HLPQSFQSIRKANLKQSTSNSCLFFQFSTRKLAGCLCATS-----PNPISQS 60
MAL+ QH LP F + + S CLF +L A+S P P S S
Sbjct: 1 MALISQHLTLPPPFPFLHNHSPNSPFSKPCLFVFSKNLRLFSLHAASSASTPPPTPTSHS 60
Query: 61 PSPIFLPFLEEEEEEEEEE-EDEEEHKEVLGGNTTEDWNDPLVRFFKSRTSTTQDPLPES 120
+PIFLPFL ++++EEEEE ED +E +E ED +DP++RFFKSR+ST QDP E
Sbjct: 61 SNPIFLPFLRDDDDEEEEEPEDLQELEEE--EEDEEDPDDPILRFFKSRSST-QDPQREG 120
Query: 121 KLSLQKNRRSSWHLASDVECSVEAEIAPG------EDKKQSGLVSRNSRALPDGVVGDIV 180
KLSLQKNRRSSW LA D + E+E G + K+Q+ ++ +SRAL + +V +I+
Sbjct: 121 KLSLQKNRRSSWRLADDTQLVDESETDSGIEGVLEQQKEQARQLNFDSRALSEEIVEEIL 180
Query: 181 RTARNLPQNTTLGEALGDFEGKIDEKECLEVLRLLGEENLVVCCLYFFEWMGLQEPSLVT 240
+ AR LPQN TLGE LG FEG++ EKE ++VL L+G+E L++ CLYF+EWMGLQE SLVT
Sbjct: 181 QKARTLPQNLTLGEVLGGFEGRVGEKESVKVLELMGKEGLLMGCLYFYEWMGLQETSLVT 240
Query: 241 PRAYSILFPLLGRAGMGDKIMVLFKNIPLKKELQDVHVYNSAMSGLMVCKRYNDACEVYA 300
PRA S+LFP+LGRAGMGDK+M+LF+N+P K E +DVHVYN+A+SGLM KRY+DA EVY
Sbjct: 241 PRACSVLFPMLGRAGMGDKLMILFRNLPAKNEFRDVHVYNAAISGLMCSKRYDDAWEVYE 300
Query: 301 AMETNKVNPDHVTCSIMITVMRKIGRSAKDSWDYFEKMNEKGVKWSPEVLGALIKAFCDE 360
AME N PDHVTCSIMITVMRK+GRSAKDSW +FE+MN KGVKWS EVLGALIK+FCDE
Sbjct: 301 AMEANNTLPDHVTCSIMITVMRKVGRSAKDSWQFFERMNRKGVKWSQEVLGALIKSFCDE 360
Query: 361 GLKSQALIIQLEMEKKGVTSNAIVYNTIMDAFSKSNQIEEAEGLFAEMKAKGVKPTSATF 420
GLKS+ALIIQ+EMEKKGV+SNAIVYNT+MDAF SNQ+EEAEGLFAEMK++G+KPT+ATF
Sbjct: 361 GLKSEALIIQVEMEKKGVSSNAIVYNTLMDAFCNSNQVEEAEGLFAEMKSRGIKPTAATF 420
Query: 421 NILMDAYSRRMQPEIVEKLLIEMKDTGFEPNVKSYTCLISAYGRKKTMSDMAADAFLRMK 480
NILM AYSR+MQ EIVEKLL+EM+D G EPNVKSYTCLISAYGR+K MSDMAA+AFLRMK
Sbjct: 421 NILMSAYSRKMQTEIVEKLLVEMQDMGLEPNVKSYTCLISAYGRQKKMSDMAANAFLRMK 480
Query: 481 KNGIKPNSHSYTALIHAYSVSGWHEKAYSTFENMLQEGLKPSIETYTTLLDAFRRAGDTE 540
K GI P SHSYTALIHA+SVSGWHEKAY FENM +EGLKPSIETYT LLDAFRRAGD +
Sbjct: 481 KAGISPTSHSYTALIHAFSVSGWHEKAYIAFENMQKEGLKPSIETYTALLDAFRRAGDAQ 540
Query: 541 ALMKIWKLMIREKVAGTRVTFNILLDGFAKQGHYIEARDVISEFSKTGLQPTIMTYNMLM 600
LMKIWKLMI+EK+ GT+VTFN LLDGFAKQGHY EARDVISEF GLQPT+MTYNMLM
Sbjct: 541 MLMKIWKLMIKEKIEGTKVTFNTLLDGFAKQGHYTEARDVISEFGNIGLQPTVMTYNMLM 600
Query: 601 NAYARGGQHLKMPQLLQEMAARELKPDSVTYSTMIYAFVRVRDFKRAFFYHKKMVKSGQV 660
NAYARGGQH K+PQLL+EMAA LKPDSVTYSTMIYA+VRVRDFKRAFFYHK+MVKSG++
Sbjct: 601 NAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYAYVRVRDFKRAFFYHKQMVKSGEM 660
Query: 661 PDVKSYQKLRSILDAKLDTKNRKDKSAILGIMNSKLGMVKAKKKGKKDEFWKNKRK-YVK 708
PD +SY+KLR+ILD K KN+KD+SAILGI+NSK+G++K KKKGKKDE WKNK+K YV+
Sbjct: 661 PDARSYEKLRAILDVKAARKNKKDRSAILGIINSKMGLLKIKKKGKKDELWKNKKKRYVR 718
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP426_ARATH | 4.7e-243 | 61.55 | Pentatricopeptide repeat-containing protein At5g50280, chloroplastic OS=Arabidop... | [more] |
| PP362_ARATH | 9.2e-45 | 27.02 | Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN... | [more] |
| PP407_ARATH | 1.2e-41 | 27.80 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... | [more] |
| PP163_ARATH | 2.8e-41 | 24.63 | Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop... | [more] |
| PP124_ARATH | 6.1e-41 | 22.33 | Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LWH7_CUCSA | 0.0e+00 | 84.32 | Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050000 PE=4 SV=1 | [more] |
| A0A061G5M6_THECC | 1.8e-273 | 70.01 | Pentatricopeptide repeat superfamily protein isoform 1 OS=Theobroma cacao GN=TCM... | [more] |
| W9S5W3_9ROSA | 1.2e-269 | 72.36 | Uncharacterized protein OS=Morus notabilis GN=L484_008195 PE=4 SV=1 | [more] |
| A0A067K438_JATCU | 1.3e-268 | 70.30 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11367 PE=4 SV=1 | [more] |
| B9RT09_RICCO | 3.3e-267 | 65.63 | Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G50280.1 | 2.7e-244 | 61.55 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT5G02860.1 | 5.2e-46 | 27.02 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT5G39710.1 | 7.0e-43 | 27.80 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G18940.1 | 1.6e-42 | 24.63 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G74850.1 | 3.5e-42 | 22.33 | plastid transcriptionally active 2 | [more] |
